TCONS_00012381 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012381
Unique NameTCONS_00012381
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2454

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012381 ID=TCONS_00012381|Name=TCONS_00012381|organism=Clytia hemisphaerica|type=transcript|length=2454bp
CCCAAAAGAAAATGGCTTTTGAAAGTCTATATTTGGATCAAAGGCCATCA
ATAGGATTGGTTCATCCACAACCGCAACGAAAACATCGAGACGAGGAAAT
AGTAAAATCAAGTCAATCGATGAATTCGCTTCATTTCTCACCACGTGACT
CGGTCACAGTCCACTCGCTATCACCCACCGAGCTTTCACGTTATGGCTCC
TCTTACCCTCCTGGTAGAGGACACGTGCATGGACCCCAGACCTCATGCCC
CGTACACGGTCAAGAATCAAGTCATCCCCACGATGAACGAAATGGCCGTC
CGCCAAACCTTCCGTTCGATGCGCCGCACGGCTTCCATGGGTTACACGGG
CCGCATCCTCGTTTTCGTGAAGACATTTACATGAGACGACATTCATTAGA
TCGTAAAGAGCATTTACCGCCCCCACCCCATCACGCCTTAGAAGAAGACT
TGCGAAGAAGAGGAATGGATTTTAGAGGTTTTGCTGGTTTACCGCCCCAT
CTCTTGGATGAGCAATACAGGCGTCATTTGTTGAATGGAACGCATGAACA
CCCTCCACCCTTCAAAGAACCAGGACATGGACAAGTCTTTGTTCCACCGC
ATTTCTATTACGGTCGTGAATATCCGCTCCCGGTTGACCCCTACCATCCG
CACGCGTTATCCGCAGCGCCGAGTGAACTTCTTCACAGATACGGAGGTGC
ACCTCCACCGGTCAGTCCCAGGCTACTAGAAGCCTATCGACGTAATGAGC
ATGGTGTTTTGAGCTCGCGCGAATTCGAAGCGGCCGAGCGACGATATGAA
GAACGCCGGGAGAGTGCTGACCAAAAAGAAAGTGTTATTCGACCAGCTTC
TATCGATCTCTACCGCAAGAAGAGTGCAGAAAATCATATGCACGaTCGTC
GTAAACACAGTATTTCACTGGACAAGAAACCAGTCGTCCACGAAAAAGAG
GAACCACCTCGAATGAAGATGCCCATTTTCAAAGGTTTGGAATGTAACAA
TAACAACATCAAACCACACCCTAAACAAAATGGTACATCACATCAAGCCA
ACTCCATCACCTCGCTTTTAAACAGCAAGCTGCCGAACTCTAAAAGTGAA
TTAGATGCGGCCAGTATTCTTGCCAACATGAATCGAATCAGCCAATCACC
AGCTTGCTCAGATGAACAGGAGAGTATCACCAGTAGTTCAGCCCCTGAAG
TGATCCCTCCAACGCACATCAAACAACAACCATTGATCAAAGAAGAAGAC
AAAGAAAATGTCGAAATCGAACAACCTGAAGAGAAGCTGAATTATTTGTT
AAACCTCGGATTGGTCATGCATTCTCGAAAAAGAATTTTAGAGGAAGAAT
TTGAGAGAAAACGTTGGGATCGCAAATTTCGAAAATATCGTGGACGACCG
AAGAAAAGATCAAAAAGAGAGAACACCGAAGAAGGTAGTGTTAATGGTGA
CTTGAGACCTGGATCTGATCTTGATTTTTATAACGGGCCCATGACCAGGC
ACAAGCAACAACTCTTACAAGAACAAGAGAACTTACTGGAACAAATTCAA
AAACAGAACAGTACAGAGAACAATTCTGAGAACGTTCAGAGTCCAGGGGA
AAACAGTAACCCTGAGACAAATAAAGATAATCAAAGACCCGCATCAAGAA
GTAGCGGCAAGAGCAAAAAATCTCCGCGAAACTCTCCCCGTAAAGACTCG
ATATCGAAAAGCTCTTCTAATGGGGACGCGGCAGTTGAAAATAACGACAA
CCAAACGACAAATGTTCCGACACCTACGGTTTTCATTAAATCGGAAGAAA
ACTTATCAACATCGTCACGAAAATCAACTCCGACTCCGACCAACCATCAT
GCGCCCAAAGAGTCGTCGGTAATTGGCACCCACGACAATTCTCACCGCCA
AGACGAACGACGTCAAACAAACGACCGCTCTGATCGCCTCATGACACTGA
TCAAAGATAAGGTTCACCCTGTACCGGCCCCTTCGCCTTCATCGGCCTCG
TCAAGCCACCACCGGCATCATCCACACCATCATCTGATGGATAAAAATCA
TCTTCTTCATCGACAGCCCTCTCCACAGCCCTCTCCACATCCCTCGTCGT
CCTCTTCACATGAACATTTAAAAAGGCATTCTTCTACATCAGCCAATAAT
AGCGCGTTTAACGATCACGTGCCACGTCCTTCGTCCAATCATCACGCTTC
ATATGCTGAACACGTGGAGGAGATGAGGAAGTTGGACAGCAGTTTATTTG
GTAGACACATGgaACCGACACAAGACCATTTCGCTCGTTGGCCAGGAGTC
AATTACATTCAACATGCATATACTTCGTATTTAAAAGGTAAAAGAACGTC
GTTTTCTCACAAAAAAAATGGTTTGGTTGTGCTCGGGCGCCGCGGGAGAG
ACCTCTTGAATATAAATCTTCATTATTAGACAAGGtcttattgggctctt
ccag
Run BLAST on NCBI

transcript from alignment at sc0000144:138729..154669+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012381 ID=TCONS_00012381|Name=TCONS_00012381|organism=Clytia hemisphaerica|type=transcript|length=15941bp|location=Sequence derived from alignment at sc0000144:138729..154669+ (Clytia hemisphaerica)
CCCAAAAGAAAATGGCTTTTGAAAGTCTATATTTGGTGAGATGTTATTAC
TGCGATTCTTTATTTCTCCCTCTCAGCCAGAGTTGAAAACAATGAATGAC
TTTTGATCTTGCCATCAAAACTAGTTCAACTACCCTTTAATGCATTCTAC
GCAATTTTACTGAAGTTGAAATTTTAGTCTCGCTCTCACTCACTCATCCT
TTTCTACTTTCCCTCataccaaaatttttcaaatctatgaataaataaga
tttttgaagccgaaattcttttttttaatgctAGTTTCGTCCCATGCTTC
GTGATCAAAATAGCCAAGACTTTAATATGTTTTCTTTTGGTCTAGTTTTA
ATTGAtgcctttttctttcttcttcgtGGACAGGATCAAAGGCCATCAAT
AGGATTGGTTCATCCACAACCGCAACGAAAACATCGAGACGAGGtatgtc
aagaatattttcccTTTTCTTTAGTTTGTAGAATTTCTGCATCATGTAGA
NTTTCAAATCTATGAATAAATAAGAGTTTTGAAgccgaaattcttttttt
taatgctAGTTTCGTCCCATGCTTCGTGATCAAAATAGCCAAGACTTTAA
TATGTTTTCTTTTGGTCTAGTTTTAATTGAtgcctttttctttcttcttc
gtGGACAGGATCAAAGGCCATCAATAGGATTGGTTCATCCACAACCGCAA
CGAAAACATCGAGACGAGGtatgtcaagaatattttcccTTTTCTTTAGT
TTGTAGAATTTCTGCATCATGTAGATGTGAGGCTTTTTTGTCTTATGAAT
TCACCAGACTTCATCGTAGAACTTTTCACTAAAACTGTGATTACAGAAAC
AACAAGGATATACAAAAGTCGAGCTTAGATGGGATACACTGCTAGTTTGA
CCCTGAGTTACAGTTACAGAATATCATCATAACAGTTTATTTTTCCAAAG
CGGAAATAACGCTTACTTAATGTTTACTGCTAAACATTTCACCAGatgaa
ataatgaaatcatgACATGTTTGTTGACTTGAAAGTATCGTCTGATAACA
AACTGTGTTTCATTTAACAAAAGAAGCAAGCACTTTATGATGGCAGAATG
ACTGTCAAGGTTTTTTATGTTACAATTGGAATCAAGAACATTGCGTGGCT
AGTTCTTCAACAGAGCATGATCTTAGTTGTACCTAATAACGTGCCTTGTG
CAGGACGTATTACTTATGTTTCTTATACAAAATAGTCGCTAAGTGATGAA
GTGTCCTTGGTGAtataacgttttttttattgttgCTTTTTTACATCACT
GCACCACCGTAATACATTATTGTTTACAGAATCAACATTGAGAAACGTAC
AAACATACCTCTTTTCATTTCTCTACGTCTACTGACAACTGACAGCTGGC
TTATGATGATACATTATATAGTGTTTGGTTACTGTTAGCAAGTGTATGta
tcttaactttttgatgACGAAGGAGAGACTGAAGTTTGGTAAACCTGCAA
TATTGACACGGAAAGTAGAGGCCGGTAAAAGCATGGGAATAGTCTTTGGT
TGATCAGATTTGAGCACTTTTTAGGTCAAAACTTTCCTCTTACGAAAGCT
TTGGAGGCTTCAATTTGTAGAACTAACAATGGAGCTATCTTTCAAatcag
tggcgtggtggcagggggggaccagcccccccccagcggagcccttttga
gaaggggcgcccaaaaataagggacgccaagaaggatttttcaggcgccc
atatcgaaagattgacaaatgaaaaaacaaaaatggcgcccctcatcaac
tcaaaattttctggctcgcttcgctcgaacactcccttttttgtgttcat
aatgagcgtatagagagaagcgccaaaaacaaaaaatctttaaaaagggc
gccatatttgccttggccaccccagagaaattttaCCACCACGCCACTGT
TTCAAATGCAAACCATATGAACAACGTAAATTCAGTGCGCAATATGATAA
GATGATCTCTACGTTAATTGCAACTTAATGCTCTACGGTTTGCAGCAATA
TATCATGACAGACTTGTGTATGAACAATTGTTCAGTATTGAGAAGGTTCG
AACCTAACTGAAACTTAAAAAAGTTGTCTCCTGTACCATTTGCGATTCCG
TCAGGCTCTTGCTTCACCGCAACTGATAGCATAACCAGCTTATTATGCAA
TGACCCCTGTTTTCAACAATGAACCAATCACATGGCGATTATGCGACTGT
TAAGCTTTTCTAATCTCTGACAAAATAAAGTAACCATTAAAACTTTatta
tgttatctttttatatGTATGTATATTCTTTTACAATGATTTTTATCAGC
TTGCCTCTTATAAGAATCATGGTACTTTCGAAATGTACCAACTCGGAGAT
GTCTTTtgggattttgaaatttttaaaattagtGAAGATGTTAAGAATAT
AATTTCAACGTGTTCTTACTGAAACTTGGCTTACACTTTATccattttcg
caaatttttcaGTCAAAGAGGTCAATTCTATTGTTTGAAATTCTTATGAA
AGACTTGGTGATTTGTCAATCAAAACGAAACACACATCGAGGTCAGGTTG
TAATCAACCCTTAATGTTATCACATACATACATTTACATGCTAACAAAGA
GAGAAAAGAAAACCATTTACTAATTTCTTATAAAAGGCTTATATGTCAGT
CATCATCGAGTTTTGCTGGTTTTCTCTTGAAAAGCTCttagacaaaattt
gacaatGATCTTTAATCAGAAAattgttgtgtcaacttgtagtagttaaa
atttggttatgtgatgaaagtttttcatttgtagTTTTTGGTTAAGTCTT
CCGAAGATATGgttgtcattttttaattttgatttcatttgcTTAGCCAT
TAAAACTTTAGATTTGGCATGATATCTTCCTCCTGCAAGAATCTTCTTCT
TAATCTTTTATCCTCGAAGCTCTTATTTAATCACTCCTGATAAATGAATG
TGTGTAGCTCTATATTTCTGGCTTGATTGAGATATCACATTGTATGTCAT
TTTACTGTATTTCGTTTTGAGGAGAGGTTTTGTCATCTTGGGTTCCATTT
GAGGTCTTCTAATACATTATAACGATAAAGAAAGATTTCGTGAATTTCGT
AGCACGAATCAGGAAGAAGGAACCCTGTTCATTCTCCGATTGAGATGAGA
TGAGGGAAAGTGATAGTTTATTGTATCATTATCGATAATCAAGTCATATC
AATGTTACCTGTGACCCTTtcctttctttataagaacatatattCTTTTA
GCTCTCACTTTATGGTTCTTACAATCTGAGAACAAGTTTGTACCAGAGAT
GCATATTCAGTGTCTTTACAACGGGCATTGCTTTTCCTTGACATGTTGAG
TTCGGTGAAGAATAGCTGTTATAGTTTGATACGAAGAACGAATGAATGTG
AATAAATGAGTTTTTCTTACAACGGTCTGCTTGTTTTGCACATCCAGTGT
GTTCTGTTACAAtcaattaatttttcaatcGCCGGGAAATTAACATTTTA
ATTGCTTAGTAATTATACGATATAAATGTGATACGTTTTCGAAATTGGTT
CTGTTAATTATGTTCTATAGACTTGTCTTCTCTCTTCGCCTTTTCATTGT
GATGAATGCAAGGTCGTTTTCGCCATGGTGCGTTGTTTTTTCTTCGGGTG
TAGCTtctcactgaaaaatttgaaaattcgtaATGGAGAACTATGTATGC
TATCTGGATAAAAAGTTATAGTCAAAAcagtttcatcgattttttcaGGG
TAATGAATGGATCATGTATTAACCACGCTAAAACGTTATTTGAAATGTCA
TTCTTCCTTTTCCAGTAAGACAGGAAAGGGTTGTGATTTTAGGGTAGTGG
gtccaaaatatattttgtctGGTCGGGAGGCTGAAAGATACATGAGATTC
TTTATTTCAATTATACTACTTGATACAACTGCTTAACTGATTAATGAGAG
ATGGCAGTTCATTGTGTTCTTCAAATTTTAGCCTTTTTTGTTTTACATAA
AACNTCCTCCTGCAAGAATCTTCTTCTTAATCTTTTATCCTCGAAGCTCT
TATTTAATCACTCCTGATAAATGAATGTGTGTAGCTCTATATTTCTGGCT
TGATTGAGATATCACATTGTATGTCATTTTACTGTATTTCGTTTTGAGGA
GAGGTTTTGTCATCTTGGGTTCCATTTGAGGTCTTCTAATACATTATAAC
GATAAAGAAAGATTTCGTGAATTTCGTAGCACGAATCAGGAAGAAGGAAC
CCTGTTCATTCTCCGATTGAGATGAGATGAGGGAAAGTGATAGTTTATTG
TATCATTATCGATAATCAAGTCATATCAATGTTACCTGTGACCCTTtcct
ttctttataagaacatatattCTTTTAGCTCTCACTTTATGGTTCTTACA
ATCTGAGAACAAGTTTGTACCAGAGATGCATATTCAGTGTCTTTACAACG
GGCATTGCTTTTCCTTGACATGTTGAGTTCGGTGAAGAATAGCTGTTATA
GTTTGATACGAAGAACGAATGAATGTGAATAAATGAGTTTTTCTTACAAC
GGTCTGCTTGTTTTGCACATCCAGTGTGTTCTGTTACAAtcaattaattt
ttcaatcGCCGGGAAATTAACATTTTAATTGCTTAGTAATTATACGATAT
AAATGTGATACGTTTTCGAAATTGTTTCTGTTAATTATCTTCTATAGACT
TGTCTTCTCTCTTCACCTTTTCATTGTGATGAATGCAAGGTCGTTTTCGC
CATGGTGCGTTGTTTTTTCTTCGGGTGTAGCTTttgactgaaaaatttga
aaattcgtaATGGAGATCTATGTATGCTATCTGGATAAAAAGTTATAGTC
AAAAcagtttcatcaatttttttcagggTAATGAATGGATCATGTATTAA
CCACGCTAAAACGTTATTTGAAATGCCATTCTTCCATTTCCAGTAAGACA
GGAAAGGGTTGTGATTTTAGGGTAATGGgtccaaaatatattttgtctGG
TCGGGGGCTGAAAGATACATAAGATTCTTTGCTTCAATTATACTACTTGA
TACAAATGCATAACTGATTAATGAGAAATGATACTTCATTGTGTTCTtca
ttctttcaaattttagccTTTTTTGTTTTACATGTTATAAACATTTGATG
TTTTTGTCTGGTTGCTTTGATGATGATTTCATCCTTTAACAACACTAAAA
TATACATGCTTTGAAACGTTCATTGTATGGTAATTGTATCCTTGCTTTAA
TAATAGTTATGTTTTTATCTGGAGATACGGTGCTTTTGAATTAAGATTTT
TGTCGTTTCGCTTTGGTGCTTTGTGTAGTTGAGATGCAGACCCTGTCATT
GTATTTTGTCACTGCGTTGCCTCTAGGGATTTTAGGAAGTCAAAGATAAG
TAAGGATGACTTTATACGTTTTGTTCAAGAAGTGTAAGCAATAATAGAAT
AAGCTTGCGTGCAAGTTTATGAATGGTTGCTCCCGAATGGTTACTCGTTG
CTCCTTTGGATCATGGGATTGGTCATCTTTCCATAAAGTTACCAGCTTCA
ATATAAAGACAGCTAATTACGTCTATCGCCATatagaaatcaaaaaatag
GAAACTGCATGAATCAAATGTTTTCCTTCCCATTTAAAACCTAACTGAAT
GATGTGAATGGTGTTGAAGGATTTTCGATTGACCACAGAGCTGAATGGAA
CATACATCTCCTCACATTCTTGTGCatctttttgtttcattttgattcAT
TTCGGGCCCATTGAAACACTTGTAATTATTTATCAATTGATGAATAAATC
ATGCAGAGTAGGAAGAATTTTTGTCAACTATAGAAAGGTTAGTTCAAAAa
gaaaacaccaaaatataGATTCTGGAGATTTGTGGCCCTCGTtgtttcca
tagaaaacaaTGGTATATATTTGTGTGGTGGGAAGTTTCACTGTATTGGA
AGCATTTACTTTAGAGACCATTGAAGGTTTGACTTCAAAGCCCCAATGTG
TCTGAATTGATAGGCGTTCTCCTTTGCGTTCGAATCGGTAGATaatgtat
tttgaaatttcgctATCAAGTTTTTGGTTGTGAGGATTTTAAGAAAAGAA
AGTGAATCTACTTCCTCCCATTTCTTcgtaaaagaaaatttatttggaCA
TTTTCTCACATGGCAGTCTATTCCTCCCAAATAGTCTCCAAGATTGTGAA
TATTACTCTTCGTCTAAGGACAATCAAAATCACATACTTAATTGGTTATC
AATGGCAACTCTCGAAAACAGGTCATTATGTCTAATTACTTTGAAAGCAA
TACTGTATGTACATCGTTTGCTTaaatttggaaaacatttttaggcgaaa
attcaaaaagttaagaacatccgagggcttaaaaaattttggaagttgtt
ataaaattttttggaggttttatattttattctttGAACCTTGTACCAAT
TGTGTATTGTAAGTAGTTGGTGATTGTAATTGTTTCCAGTTTATAAAACA
AGACAAGAAAAGTCTTTGGGTATTCAGTGTACTGTATGTGGTAAATTGGT
TTCCAAACTACAAACTTTGCGCTTCTTCCCACTATCAAACAGGTCCTCGA
TATTCAAATGCCAAATTCAGAAAGCCTTTTGAGTGTGAGGAGTGTGCTTT
TCTTGGAGCACTGTTTTTGAGTACCACAAACTTGACACTTCCCTTCAAAC
AGTTTGATATCTATCTGTGTTATGATTTGGATAAAACGTACTTGTGATGA
ATACACGTGTGTTTGATGGAACATTTATTCAAAACATTCCCTTCTCATCA
ATATTTACTTACTTTTTTAAGAAGTcttaattctttattttttcatcatc
acatatttacatttttgatttcatttttttcaacaaattttttccTCCTT
TACTTTACAACGTTTCATGTTCGTCCATTTTCTTTATTGAGTTCTtgatt
tatcttttcttttctttctttgttgttGTGTGTGTGAAGATCTTATGGTT
TTCGTCTTCTTTCTTCCCCTTTTCATCCTTCGACCTCATCGTTAGATATT
ATGTTTACTTGGAACAACCAATTTTCCACGTCCTGGGGTTATCATGGCGA
TTCTTGGTGACGGTTCTGACCAACTACAGAATAACAGGAAACTATTTGAA
ATAGAATTTGTATAAAACTATACAgagatatttttttcttctcttcttaG
TTTAAAATTGACGTATTGGTTTTAGCGAGTAAATTCCTTTTGGGGTAAAT
TTTGGACCCATTTTCCATATATGCTGGTTGTTTACTGATTTGAATTCCTT
TTGCGCATAAAAGGAGTTCTGGAAACGATCTATTGCAAACacatcaaaat
taaagtgaataaacagtacacgcttttttttataagaatggtgtttttca
tttcatcatggatattcttaactttttggcgaaaatattcttacgctatt
cttaggttaagatcgaaattggcaatctacaggttaaaatgcattaaaaa
tggcattcttaggttcagttgctaaacttcatgatggtgatattcttatc
atattcttaatttttcggccattttcatcatggacattcttatgaagttt
attcttataaaaaaaaaaagcgtgtatgtggAACATGGTTTTCGTGTACT
GTACTTCACACATGTAGAATTAGGGCTTTTAGTTCGTTTCATGTCATTTT
GGTGTCAAGAAATGACGAGCACAAAGTTCGTTCTTTATCATCGCATACAG
TAGATCATGTTTATTATACAATGGCTCAACATCTTCTCTTGAACGTTCAG
TTTTATTAGTTATGATAATGTAGATCATAATTGCATCAGTTTTGTTTAAT
TCCTTTATGTCAAATAGATTAATGCACTTATGTAGACACACACATCACTT
GCTTTGCCTGCCCAATAGCTCTCTTTCTCTTGTCCACAACAGCTTGTAAA
GATAAGTGTATTACAAAGTTATAATTAGGAAATTGAagctttttttctct
tttcagaacattttttatatacattttgAAGTAATTTAAACAACAGCAGA
GGGGTATTATCTGATTTTTATAGTTCCATTTCTAAAACTGGATGGATAAA
CTTATGGTAGgggagaaaataaaaattaatatcacaaagaaacattttaa
agaaagagaagatatAGAATAGAGGTTTGGAAAAAGGGTTGACTAGCTGA
GAGAAACCTTAAACACTGTTTTTATGTCGAAGGgttttttttctatgaaa
tatTATTAGTAAGGGtacaaaattgattaaaaaaagaaatgagcttaaaa
tgttattactagaagtgaaaaaaaatccaacaagCTGAGAATTGACTGCG
AGAGACTGTTGGTTGGAGGTGGATTCTTTTTAGTAATGATTTATGTCATG
CTTAGATAGTTTATATCATCTTACAAGTTTGAGTGTGATGGCGATATATA
catttatcggcgatccaaaaaatatctgcaatctgattggttaaaaagag
tacaatatatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNgtcaccgataaaccagttatcagacatttgctc
gtacaatatggaaatattttactcgttccgtattttccgtatattttcct
cgcctaaaggctcggataTGACATGACATGCTTAGATAGTTTATATCATT
TTACAAGTTTGAGTGTGATGGCGATATATACATATATTGTAAAAAGACCT
AGTGATACatgtcttaaactcatttattGGCTGATGTTTGGTTTTATGAA
GTTtcctttaaagaaaatttggGCTTCCCTTATTCGATCATATTAGTAGT
ATTGATGGTTCATTGACGGAAAGAATAATATATCTAGCAATACTCTTGCA
ATTATACTAGTAACAAGGCTAGTATAGCTTAAATTCACTGTAAAGTCACT
TTCTCTTTGAGCAGGTTTAGTACGTCGTTAAAAAATCGATCTAATAGTAG
AACGTCCAGTGAAAGATTTATAAACGTTGTCATCTTACATCACAAGCAAG
TGATCAGGGAATGAATGACGTGATAACTTGAATTTACATTGCATTATTCA
GTTAACTCAATCGTTGATCGGACTTTTCTTTGAGTGAGAATGTTTTTCGT
TCTGAAAGAGTGACTCAAAGAAATCGAGTTACGCGAAAATCTAGCTGTAA
ACTTCCTATCGcaatcgaatttttttttgaagttacTATGTGTTTATCTT
GTTTGCATCTCGAGTCAAAAGACAACAAACAAAGCCCTCTTTTGACTGTA
ATCTAAGAATGGCTAAAAAATGTCCTATTTTCTCCCCAATGTTTATCTTT
GACACTTGTATAGCGAGTACATAACATTTCAGGACTCTCAAAACACACTC
TAAAATGATATATCCTCCTTCATTTCAAACCTCCTATGAAAATAAATATT
GCCACGACCAAGTTGCTTTCGATATAAGAATCGAAAATGGTTGAAACTAT
GGTAGTCGATACACCATTTTCAGTATATACTGTATGATCCTTTATAGAAG
CTTCTTATTGTTTGCCAGACAAAATAACAGTACAGCACGGAATGTCAGAT
TGAAAtattaatattttttgtaaCAGTACACCATACCACATGAAAtctta
tttgaaaacattaatcCATGTGTATTTCAAGAGATATTATGAAGTCAGaa
tgtgtgcttataaaaaaagttttattttacgTTATGTTGATTTAAGATtg
agtttgttgttgttttttggtttctaaaaattctcTTACTTCTTTACAAA
TTTTAATCGATGCGTTTCTAAGTGGATTTTCTTGTAATTTGTGTCTCTGT
GAATGGGTTTGTAGTATCAATCGCTCTGTGACTGTGTGCTGAGTTCTATG
AAAAATCAAGTCTTTCTTTTGAGGTTCTGAAGTCTCATAAGACAGTTTTT
GATTTGGTTTAGCTGACTTTTCTGAAGTGCTTGATTTTAGGTCtgttttg
tgaatattttaaTTTGNCTGACTTTTCTGAAGTGCTTGATTTTAGGTCTG
TTTTGCGAATATTTTAATTTAAGTAATTAAACACTCCTCGTTCGGATCTC
AACGATCACTAAATCTCGATTCATTTCAACTCCAGCAACACTGTCTAACT
TCAAGGAACTTAAACTTTAAATTTGTCATCTTCTATTATCCATAGGAAAT
AGTAAAATCAAGTCAATCGATGAATTCGCTTCATTTCTCACCACGTGACT
CGGTCACAGTCCACTCGCTATCACCCACCGAGCTTTCACGTTATGGCTCC
TCTTACCCTCCTGGTAGAGGACACGTGCATGGACCCCAGACCTCATGCCC
CGTACACGGTCAAGAATCAAGTCATCCCCACGATGAACGAAATGGCCGTC
CGCCAAACCTTCCGTTCGATGCGCCGCACGGCTTCCATGGGTTACACGGG
CCGCATCCTCGTTTTCGTGAAGACATTTACATGAGACGACATTCATTAGA
TGTAAGTTTTCGTTGTTTTCCTCACTTTTAGATCAGTCCTTCTTTCTTTT
AATATAAACTTGGACATGTATGATACTATTTTACAAGCCTTCGTATTGAG
AAGATTCGATACACAAAGGTTGCCAATATGAATAGATTACTGAAACTGTG
ATTAGTAAATAAACATTGTTTCTTACTACATACTGTGATGCATCTGGCAA
TCCAGATGCTCCTTTATCGATCTCAACTGAAtgtataacttttgttttca
ttcctTTCCAGCGTAAAGAGCATTTACCGCCCCCACCCCATCACGCCTTA
GAAGAAGACTTGCGAAGAAGAGGAATGGATTTTAGAGGTTTTGCTGGTTT
ACCGCCCCATCTCTTGGATGAGCAATACAGGCGTCATTTGTTGAATGGAA
CGCATGAACACCCTCCACCCTTCAAAGTAAGTCtaaattactttttcttt
agaagttttgcttAACAAAAATGAATGAACTTAATTATATAACTATTTAA
TAAAACAATcgaaaaagttatatttttccgGTTTTCTTCACTAGGAACCA
GGACATGGACAAGTCTTTGTTCCACCGCATTTCTATTACGGTCGTGAATA
TCCGCTCCCGGTTGACCCCTACCATCCGCACGCGTTATCCGCAGCGCCGA
GTGAACTTCTTCACAGATACGGAGGTGCACCTCCACCGGTCAGTCCCAGG
CTACTAGAAGCCTATCGACGTAATGAGCATGGTGTTTTGAGCTCGCGCGA
ATTCGAAGCGGCCGAGCGACGATATGAAGAACGCCGGGAGAGTGCTGACC
AAAAAGAAAGTGTTATTCGACCAGCTTCTATCGATCTCTACCGCAAGAAG
AGTGCAGAAAATCATATGCACGGTAAGAGAATCCTCTTTTTTTTCGAATG
TCTTGTTTAGATTTCTATTTTCGTTTTCTCAAGTGCAAGTCAAGATGTAC
AATTGTTTTCAAGATGGTTGTGAAAAACCTTTCGAACTATCCAATTGAAA
CAtggatttttatgttttcagaTCGTCGTAAACACAGTATTTCACTGGAC
AAGAAACCAGTCGTCCACGAAAAAGAGGAACCACCTCGAATGGTATGTTT
TTTTAATCTCACTTGTATTGGCATCATAAAAGTATAACGAGTCTGGTTGG
AAGGTTGTGGTGATGATTGTGACTATGATTTCGAGAGCTTTTCACTGCCC
AAAATGTGTTTTTACCAGATCTCTCACCGAGTGTTGGCATATGATGTTTG
TGTCCTTTTGCGAGATTTTGGTGAAGATTTTAAATCATGGCTCGCAGTTG
ATGATGAGTTCTCTCAAACAGGAATTGTTAAAAAAGTTCTCGTTTTCTCT
ATTTTTCGTAGAAGATGCCCATTTTCAAAGGTTTGGAATGTAACAATAAC
AACATCAAACCACACCCTAAACAAAATGGTAAACCACATGATTTTTATCG
CAACCCTTGAGTCAAATAATATTTTACACAAGATAGCATATATTTAATGT
GTATGTGAATTGGAACACTTTCTTTGTTAGTCTTTGAACGGAGTATTGAC
AAGATGGGTCACTATACCTAACTACTGTATGATATTCTCTTTCCTTCTAT
ATAGCTATTCCTTGCAAcgattgaaattcttttttcttatcCAAGGTACA
TCACATCAAGCCAACTCCATCACCTCGCTTTTAAACAGCAAGCTGCCGAA
CTCTAAAAGTGAATTAGATGCGGCCAGTATTCTTGCCAACATGAATCGAA
TCAGCCAATCACCAGCTTGCTCAGATGAACAGGAGAGTATCACCAGTAGT
TCAGCCCCTGAAGTGATCCCTCCAACGCACATCAAACAACAACCATTGAT
CAAAGAAGAAGACAAAGAAAATGTCGAAATCGAACAACCTGAAGAGGTAT
AATTTCCTCATGTCTTCTTATCAGAAGATTTGACATTTAATAAAGAGTCT
AATACGGAAGAGCGTAGAGAAAACTTCATATGCTAATTAAGAGAATCTGG
TGGTTGCAAGGCACGCTGTAGATACAAAGCCCTTTAAATTTCACATTGCN
ACGGTAAGAGAATCCTCTTTTTTTTCGAATGTCTTGTTTAGATTTCTATT
TTCGTTTTCTCAAGTGCAAGTCAAGATGTACAATTGTTTTCAAGATGGTT
GTGAAAAACCTTTCGAACTATCCAATTGAAACAtggatttttatgttttc
agaTCGTCGTAAACACAGTATTTCACTGGACAAGAAACCAGTCGTCCACG
AAAAAGAGGAACCACCTCGAATGGTATGTTTTTTTAATCTCACTTGTATT
GGCATCATAAAAGTATAACGAGTCTGGTTGGAAGGTTGTGGTGATGATTG
TGACTATGATTTCGAGAGCTTTTCACTGCCCAAAATGTGTTTTTACCAGA
TCTCTCACCGAGTGTTGGCATATGATGTTTGTGTCCTTTTGCGAGATTTT
GGTGAAGATTTTAAATCATGGCTCGCAGTTGATGATGAGTTCTCTCAAAC
AGGAATTGTTAAAAAAGTTCTCGTTTTCTCTATTTTTCGTAGAAGATGCC
CATTTTCAAAGGTTTGGAATGTAACAATAACAACATCAAACCACACCCTA
AACAAAATGGTAAACCACATGATTTTTATCGCAACCCTTGAGTCAAATAA
TATTTTACACAAGATAGCATATATTTAATGTGTATGTGAATTGGAACACT
TTCTTTGTTAGTCTTTGAACGGAGTATTGACAAGATGGGTCACTATACCT
AACTACTGTATGATATTCTCTTTCCTTCTATATAGCTATTCCTTGCAAcg
attgaaattcttttttcttatcCAAGGTACATCACATCAAGCCAACTCCA
TCACCTCGCTTTTAAACAGCAAGCTGCCGAACTCTAAAAGTGAATTAGAT
GCGGCCAGTATTCTTGCCAACATGAATCGAATCAGCCAATCACCAGCTTG
CTCAGATGAACAGGAGAGTATCACCAGTAGTTCAGCCCCTGAAGTGATCC
CTCCAACGCACATCAAACAACAACCATTGATCAAAGAAGAAGACAAAGAA
AATGTCGAAATCGAACAACCTGAAGAGGTATAATTTCCTCATGTCTTCTT
ATCAGAAGATTTGACATTTAATAAAGAGTCTAATACGGAAGAGCGTAGAG
AAAACTTCATATGCTAATTAAGAGAATCTGGTGGTTGCAAGGCACGCTGT
AGATACAAAGCCCTTTAAATTTCACATTGCCATTGCTCTCCtaatcaaaa
acttttgttttactTTACAGAAGCTGAATTATTTGTTAAACCTCGGATTG
GTCATGCATTCTCGAAAAAGAAGTAAGTTCTCTCTCCTCTTTTGTTAGAT
TCGTAGTCGAACTGGAATTTATTAGCGAATATTAACTAAGGTGGTTTCTT
CTTACTTTCTTCATTTCAttaattttcatatttatttAGTTTTAGAGGAA
GAATTTGAGAGAAAACGTTGGGATCGCAAATTTCGAAAATATCGTGGACG
ACCGAAGAAAAGATCAAAAAGAGAGGTGTGTTGTCTTTGTTGGTATTTTT
AGGGATTTTGACAGCTCTTTTGAAACGTTGCATAACACAAATTCAGAGTG
AAAAGAACTAGCGATAGATCCATTTCAATCTCATTTTTCCTAAATCTGTA
GTTATGACTTTGAAATCCATTTAAACaatttaatatttatgttttctAGA
ACACCGAAGAAGGTAGTGTTAATGGTGACTTGAGACCTGGATCTGATCTT
GATTTTTATAACGGGCCCATGACCAGGCACAAGCAACAACTCTTACAAGA
ACAAGAGAACTTACTGGAACAAATTCAAAAACAGAACAGTACAGAGAACA
ATTCTGAGAACGTTCAGAGTCCAGGGGAAAACAGTAACCCTGAGACAAAT
AAAGATAATCAAAGACCCGCATCAAGAAGTAGCGGCAAGAGCAAAAAATC
TCCGCGAAACTCTCCCCGTAAAGACTCGATATCGAAAAGCTCTTCTAATG
GGGACGCGGCAGTTGAAAATAACGACAACCAAACGACAAATGTTCCGACA
CCTACGGTTTTCATTAAATCGGAAGAAAACTTATCAACATCGTCACGAAA
ATCAACTCCGACTCCGACCAACCATCATGCGCCCAAAGAGTCGTCGGTAA
TTGGCACCCACGACAATTCTCACCGCCAAGACGAACGACGTCAAACAAAC
GACCGCTCTGATCGCCTCATGACACTGATCAAAGATAAGGTTCACCCTGT
ACCGGCCCCTTCGCCTTCATCGGCCTCGTCAAGCCACCACCGGCATCATC
CACACCATCATCTGATGGATAAAAATCATCTTCTTCATCGACAGCCCTCT
CCACATCCCTCGTCGTCCTCTTCACATGAACATTTAAAAAGGCATTCTTC
TANGGCGGAACATGCAAGTGAGCATCGAAGGTGTCCATAAAGCACTACGT
TCCATGTCTGATTTATAGGATTGACATTCGCTTATCTTTTTCAAGTTTGT
CCTTTTAGTTTAGTCTTTAGTCAAgttttcaatctttttattGCGTGTAA
AATCTGGGGAAANCCACCGGCATCATCCACACCATCATCTGATGGATAAA
AATCATCTTCTTCATCGACAGCCCTCTCCACATCCCTCGTCGTCCTCTTC
ACATGAACATTTAAAAAGGCATTCTTCTACATCAGCCAATAATAGCGCGT
TTAACGATCACGTGCCACGTCCTTCGTCCAATCATCACGCTTCATATGCT
GAACACGTGGAGGAGATGAGGAAGTTGGACAGCAGTTTATTTGGTAGACA
CATGGTAAGCCTATTCAATTCATAAATTCTAGTAACTGACGAGAGCCTTT
TTCTGGTCAATCTGCTAGGATTGTTTTTCACTAAGTAAAGTTTTCGTCGA
GCGGTCAGTAGTTGAATGAGTGAAATGACTCATGAATCATTGGTGATACG
GTTAAAAATAAGGGTTTCTCTCACgtgaatattttttcattttattagga
ACCGACACAAGACCATTTCGCTCGTTGGCCAGGAGTCAATTACATTCAAC
ATGCATATACTTCGTATTTAAAAGGTAAAAGAACGTCGTTTTCTCACAAA
AAAAATGGTTTGGTTGTGCTCGGGCGCCGCGGGAGAGACCTCTTGAATAT
AAATCTTCATTATTAGACAAGGtcttattgggctcttccag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006961XLOC_006961Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012381-exon-sc0000144-1491911889:138729..138763TCONS_00012381-exon-sc0000144-1491911889:138729..138763Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:138729..138763TCONS_00012381-exon-sc0000144-1510915933:138729..138763Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:138729..138763TCONS_00012381-exon-sc0000144-1575043694:138729..138763Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:139387..139446TCONS_00012381-exon-sc0000144-1491911889:139387..139446Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:139387..139446TCONS_00012381-exon-sc0000144-1510915933:139387..139446Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:139387..139446TCONS_00012381-exon-sc0000144-1575043694:139387..139446Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:149174..149479TCONS_00012381-exon-sc0000144-1491911889:149174..149479Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:149174..149479TCONS_00012381-exon-sc0000144-1510915933:149174..149479Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:149174..149479TCONS_00012381-exon-sc0000144-1575043694:149174..149479Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:149740..149904TCONS_00012381-exon-sc0000144-1491911889:149740..149904Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:149740..149904TCONS_00012381-exon-sc0000144-1510915933:149740..149904Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:149740..149904TCONS_00012381-exon-sc0000144-1575043694:149740..149904Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:150023..150350TCONS_00012381-exon-sc0000144-1491911889:150023..150350Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:150023..150350TCONS_00012381-exon-sc0000144-1510915933:150023..150350Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:150023..150350TCONS_00012381-exon-sc0000144-1575043694:150023..150350Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:150500..150570TCONS_00012381-exon-sc0000144-1491911889:150500..150570Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:150500..150570TCONS_00012381-exon-sc0000144-1510915933:150500..150570Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:150500..150570TCONS_00012381-exon-sc0000144-1575043694:150500..150570Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:150840..150906TCONS_00012381-exon-sc0000144-1491911889:150840..150906Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:150840..150906TCONS_00012381-exon-sc0000144-1510915933:150840..150906Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:150840..150906TCONS_00012381-exon-sc0000144-1575043694:150840..150906Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:152305..152555TCONS_00012381-exon-sc0000144-1491911889:152305..152555Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:152305..152555TCONS_00012381-exon-sc0000144-1510915933:152305..152555Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:152305..152555TCONS_00012381-exon-sc0000144-1575043694:152305..152555Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:152749..152800TCONS_00012381-exon-sc0000144-1491911889:152749..152800Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:152749..152800TCONS_00012381-exon-sc0000144-1510915933:152749..152800Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:152749..152800TCONS_00012381-exon-sc0000144-1575043694:152749..152800Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:152918..153003TCONS_00012381-exon-sc0000144-1491911889:152918..153003Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:152918..153003TCONS_00012381-exon-sc0000144-1510915933:152918..153003Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:152918..153003TCONS_00012381-exon-sc0000144-1575043694:152918..153003Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:153178..153832TCONS_00012381-exon-sc0000144-1491911889:153178..153832Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:153178..153832TCONS_00012381-exon-sc0000144-1510915933:153178..153832Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:153178..153832TCONS_00012381-exon-sc0000144-1575043694:153178..153832Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:154098..154282TCONS_00012381-exon-sc0000144-1491911889:154098..154282Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:154098..154282TCONS_00012381-exon-sc0000144-1510915933:154098..154282Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:154098..154282TCONS_00012381-exon-sc0000144-1575043694:154098..154282Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1491911889:154477..154669TCONS_00012381-exon-sc0000144-1491911889:154477..154669Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1510915933:154477..154669TCONS_00012381-exon-sc0000144-1510915933:154477..154669Clytia hemisphaericaexon
TCONS_00012381-exon-sc0000144-1575043694:154477..154669TCONS_00012381-exon-sc0000144-1575043694:154477..154669Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:138729..154669 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.096357	0.520318	0	1.10289	0.1567	0.124254	7.7432e-06	4.45572	9.0563	0.000693773	3.28007	3.45976	5.91899	0.68249	4.91014	11.4974	6.79193	7.19913	1.15238	6.27278	7.4709	0.768072	6.13593	3.6464e-06	1.33915e-08	17.9411	10.9931	1.04802	0.868088
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012381 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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