TCONS_00012378 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012378
Unique NameTCONS_00012378
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2780

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012378 ID=TCONS_00012378|Name=TCONS_00012378|organism=Clytia hemisphaerica|type=transcript|length=2780bp
ATTAGATAGTTGATTCGTTTTGGGCTAGGATTCACTATGTTTCATTCCTA
TGATCACTTTCCCCAAAAGAAAATGGCTTTTGAAAGTCTATATTTGGATC
AAAGGCCATCAATAGGATTGGTTCATCCACAACCGCAACGAAAACATCGA
GACGAGGAAATAGTAAAATCAAGTCAATCGATGAATTCGCTTCATTTCTC
ACCACGTGACTCGGTCACAGTCCACTCGCTATCACCCACCGAGCTTTCAC
GTTATGGCTCCTCTTACCCTCCTGGTAGAGGACACGTGCATGGACCCCAG
ACCTCATGCCCCGTACACGGTCAAGAATCAAGTCATCCCCACGATGAACG
AAATGGCCGTCCGCCAAACCTTCCGTTCGATGCGCCGCACGGCTTCCATG
GGTTACACGGGCCGCATCCTCGTTTTCGTGAAGACATTTACATGAGACGA
CATTCATTAGATCGTAAAGAGCATTTACCGCCCCCACCCCATCACGCCTT
AGAAGAAGACTTGCGAAGAAGAGGAATGGATTTTAGAGGTTTTGCTGGTT
TACCGCCCCATCTCTTGGATGAGCAATACAGGCGTCATTTGTTGAATGGA
ACGCATGAACACCCTCCACCCTTCAAAGAACCAGGACATGGACAAGTCTT
TGTTCCACCGCATTTCTATTACGGTCGTGAATATCCGCTCCCGGTTGACC
CCTACCATCCGCACGCGTTATCCGCAGCGCCGAGTGAACTTCTTCACAGA
TACGGAGGTGCACCTCCACCGGTCAGTCCCAGGCTACTAGAAGCCTATCG
ACGTAATGAGCATGGTGTTTTGAGCTCGCGCGAATTCGAAGCGGCCGAGC
GACGATATGAAGAACGCCGGGAGAGTGCTGACCAAAAAGAAAGTGTTATT
CGACCAGCTTCTATCGATCTCTACCGCAAGAAGAGTGCAGAAAATCATAT
GCACGaTCGTCGTAAACACAGTATTTCACTGGACAAGAAACCAGTCGTCC
ACGAAAAAGAGGAACCACCTCGAATGAAGATGCCCATTTTCAAAGGTTTG
GAATGTAACAATAACAACATCAAACCACACCCTAAACAAAATGGTACATC
ACATCAAGCCAACTCCATCACCTCGCTTTTAAACAGCAAGCTGCCGAACT
CTAAAAGTGAATTAGATGCGGCCAGTATTCTTGCCAACATGAATCGAATC
AGCCAATCACCAGCTTGCTCAGATGAACAGGAGAGTATCACCAGTAGTTC
AGCCCCTGAAGTGATCCCTCCAACGCACATCAAACAACAACCATTGATCA
AAGAAGAAGACAAAGAAAATGTCGAAATCGAACAACCTGAAGAGAAGCTG
AATTATTTGTTAAACCTCGGATTGGTCATGCATTCTCGAAAAAGAATTTT
AGAGGAAGAATTTGAGAGAAAACGTTGGGATCGCAAATTTCGAAAATATC
GTGGACGACCGAAGAAAAGATCAAAAAGAGAGAACACCGAAGAAGGTAGT
GTTAATGGTGACTTGAGACCTGGATCTGATCTTGATTTTTATAACGGGCC
CATGACCAGGCACAAGCAACAACTCTTACAAGAACAAGAGAACTTACTGG
AACAAATTCAAAAACAGAACAGTACAGAGAACAATTCTGAGAACGTTCAG
AGTCCAGGGGAAAACAGTAACCCTGAGACAAATAAAGATAATCAAAGACC
CGCATCAAGAAGTAGCGGCAAGAGCAAAAAATCTCCGCGAAACTCTCCCC
GTAAAGACTCGATATCGAAAAGCTCTTCTAATGGGGACGCGGCAGTTGAA
AATAACGACAACCAAACGACAAATGTTCCGACACCTACGGTTTTCATTAA
ATCGGAAGAAAACTTATCAACATCGTCACGAAAATCAACTCCGACTCCGA
CCAACCATCATGCGCCCAAAGAGTCGTCGGTAATTGGCACCCACGACAAT
TCTCACCGCCAAGACGAACGACGTCAAACAAACGACCGCTCTGATCGCCT
CATGACACTGATCAAAGATAAGGTTCACCCTGTACCGGCCCCTTCGCCTT
CATCGGCCTCGTCAAGCCACCACCGGCATCATCCACACCATCATCTGATG
GATAAAAATCATCTTCTTCATCGACAGCCCTCTCCACATCCCTCGTCGTC
CTCTTCACATGAACATTTAAAAAGGCATTCTTCTANGGCGGAACATGCAA
GTGAGCATCGAAGGTGTCCATAAAGCACTACGTTCCATGTCTGATTTATA
GGATTGACATTCGCTTATCTTTTTCAAGTTTGTCCTTTTAGTTTAGTCTT
TAGTCAAgttttcaatctttttattGCGTGTAAAATCTGGGGAAANCCAC
CGGCATCATCCACACCATCATCTGATGGATAAAAATCATCTTCTTCATCG
ACAGCCCTCTCCACATCCCTCGTCGTCCTCTTCACATGAACATTTAAAAA
GGCATTCTTCTACATCAGCCAATAATAGCGCGTTTAACGATCACGTGCCA
CGTCCTTCGTCCAATCATCACGCTTCATATGCTGAACACGTGGAGGAGAT
GAGGAAGTTGGACAGCAGTTTATTTGGTAGACACATGgaACCGACACAAG
ACCATTTCGCTCGTTGGCCAGGAGTCAATTACATTCAACATGCATATACT
TCGTATTTAAAAGGTAAAAGAACGTCGTTTTCTCACAAAAAAAATGGTTT
GGTTGTGCTCGGGCGCCGCGGGAGAGACCTCTTGAATATAAATCTTCATT
ATTAGACAAGGtcttattgggctcttccag
Run BLAST on NCBI

transcript from alignment at sc0000144:138668..154669+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012378 ID=TCONS_00012378|Name=TCONS_00012378|organism=Clytia hemisphaerica|type=transcript|length=16002bp|location=Sequence derived from alignment at sc0000144:138668..154669+ (Clytia hemisphaerica)
ATTAGATAGTTGATTCGTTTTGGGCTAGGATTCACTATGTTTCATTCCTA
TGATCACTTTCCCCAAAAGAAAATGGCTTTTGAAAGTCTATATTTGGTGA
GATGTTATTACTGCGATTCTTTATTTCTCCCTCTCAGCCAGAGTTGAAAA
CAATGAATGACTTTTGATCTTGCCATCAAAACTAGTTCAACTACCCTTTA
ATGCATTCTACGCAATTTTACTGAAGTTGAAATTTTAGTCTCGCTCTCAC
TCACTCATCCTTTTCTACTTTCCCTCataccaaaatttttcaaatctatg
aataaataagatttttgaagccgaaattcttttttttaatgctAGTTTCG
TCCCATGCTTCGTGATCAAAATAGCCAAGACTTTAATATGTTTTCTTTTG
GTCTAGTTTTAATTGAtgcctttttctttcttcttcgtGGACAGGATCAA
AGGCCATCAATAGGATTGGTTCATCCACAACCGCAACGAAAACATCGAGA
CGAGGtatgtcaagaatattttcccTTTTCTTTAGTTTGTAGAATTTCTG
CATCATGTAGANTTTCAAATCTATGAATAAATAAGAGTTTTGAAgccgaa
attcttttttttaatgctAGTTTCGTCCCATGCTTCGTGATCAAAATAGC
CAAGACTTTAATATGTTTTCTTTTGGTCTAGTTTTAATTGAtgccttttt
ctttcttcttcgtGGACAGGATCAAAGGCCATCAATAGGATTGGTTCATC
CACAACCGCAACGAAAACATCGAGACGAGGtatgtcaagaatattttccc
TTTTCTTTAGTTTGTAGAATTTCTGCATCATGTAGATGTGAGGCTTTTTT
GTCTTATGAATTCACCAGACTTCATCGTAGAACTTTTCACTAAAACTGTG
ATTACAGAAACAACAAGGATATACAAAAGTCGAGCTTAGATGGGATACAC
TGCTAGTTTGACCCTGAGTTACAGTTACAGAATATCATCATAACAGTTTA
TTTTTCCAAAGCGGAAATAACGCTTACTTAATGTTTACTGCTAAACATTT
CACCAGatgaaataatgaaatcatgACATGTTTGTTGACTTGAAAGTATC
GTCTGATAACAAACTGTGTTTCATTTAACAAAAGAAGCAAGCACTTTATG
ATGGCAGAATGACTGTCAAGGTTTTTTATGTTACAATTGGAATCAAGAAC
ATTGCGTGGCTAGTTCTTCAACAGAGCATGATCTTAGTTGTACCTAATAA
CGTGCCTTGTGCAGGACGTATTACTTATGTTTCTTATACAAAATAGTCGC
TAAGTGATGAAGTGTCCTTGGTGAtataacgttttttttattgttgCTTT
TTTACATCACTGCACCACCGTAATACATTATTGTTTACAGAATCAACATT
GAGAAACGTACAAACATACCTCTTTTCATTTCTCTACGTCTACTGACAAC
TGACAGCTGGCTTATGATGATACATTATATAGTGTTTGGTTACTGTTAGC
AAGTGTATGtatcttaactttttgatgACGAAGGAGAGACTGAAGTTTGG
TAAACCTGCAATATTGACACGGAAAGTAGAGGCCGGTAAAAGCATGGGAA
TAGTCTTTGGTTGATCAGATTTGAGCACTTTTTAGGTCAAAACTTTCCTC
TTACGAAAGCTTTGGAGGCTTCAATTTGTAGAACTAACAATGGAGCTATC
TTTCAAatcagtggcgtggtggcagggggggaccagcccccccccagcgg
agcccttttgagaaggggcgcccaaaaataagggacgccaagaaggattt
ttcaggcgcccatatcgaaagattgacaaatgaaaaaacaaaaatggcgc
ccctcatcaactcaaaattttctggctcgcttcgctcgaacactcccttt
tttgtgttcataatgagcgtatagagagaagcgccaaaaacaaaaaatct
ttaaaaagggcgccatatttgccttggccaccccagagaaattttaCCAC
CACGCCACTGTTTCAAATGCAAACCATATGAACAACGTAAATTCAGTGCG
CAATATGATAAGATGATCTCTACGTTAATTGCAACTTAATGCTCTACGGT
TTGCAGCAATATATCATGACAGACTTGTGTATGAACAATTGTTCAGTATT
GAGAAGGTTCGAACCTAACTGAAACTTAAAAAAGTTGTCTCCTGTACCAT
TTGCGATTCCGTCAGGCTCTTGCTTCACCGCAACTGATAGCATAACCAGC
TTATTATGCAATGACCCCTGTTTTCAACAATGAACCAATCACATGGCGAT
TATGCGACTGTTAAGCTTTTCTAATCTCTGACAAAATAAAGTAACCATTA
AAACTTTattatgttatctttttatatGTATGTATATTCTTTTACAATGA
TTTTTATCAGCTTGCCTCTTATAAGAATCATGGTACTTTCGAAATGTACC
AACTCGGAGATGTCTTTtgggattttgaaatttttaaaattagtGAAGAT
GTTAAGAATATAATTTCAACGTGTTCTTACTGAAACTTGGCTTACACTTT
ATccattttcgcaaatttttcaGTCAAAGAGGTCAATTCTATTGTTTGAA
ATTCTTATGAAAGACTTGGTGATTTGTCAATCAAAACGAAACACACATCG
AGGTCAGGTTGTAATCAACCCTTAATGTTATCACATACATACATTTACAT
GCTAACAAAGAGAGAAAAGAAAACCATTTACTAATTTCTTATAAAAGGCT
TATATGTCAGTCATCATCGAGTTTTGCTGGTTTTCTCTTGAAAAGCTCtt
agacaaaatttgacaatGATCTTTAATCAGAAAattgttgtgtcaacttg
tagtagttaaaatttggttatgtgatgaaagtttttcatttgtagTTTTT
GGTTAAGTCTTCCGAAGATATGgttgtcattttttaattttgatttcatt
tgcTTAGCCATTAAAACTTTAGATTTGGCATGATATCTTCCTCCTGCAAG
AATCTTCTTCTTAATCTTTTATCCTCGAAGCTCTTATTTAATCACTCCTG
ATAAATGAATGTGTGTAGCTCTATATTTCTGGCTTGATTGAGATATCACA
TTGTATGTCATTTTACTGTATTTCGTTTTGAGGAGAGGTTTTGTCATCTT
GGGTTCCATTTGAGGTCTTCTAATACATTATAACGATAAAGAAAGATTTC
GTGAATTTCGTAGCACGAATCAGGAAGAAGGAACCCTGTTCATTCTCCGA
TTGAGATGAGATGAGGGAAAGTGATAGTTTATTGTATCATTATCGATAAT
CAAGTCATATCAATGTTACCTGTGACCCTTtcctttctttataagaacat
atattCTTTTAGCTCTCACTTTATGGTTCTTACAATCTGAGAACAAGTTT
GTACCAGAGATGCATATTCAGTGTCTTTACAACGGGCATTGCTTTTCCTT
GACATGTTGAGTTCGGTGAAGAATAGCTGTTATAGTTTGATACGAAGAAC
GAATGAATGTGAATAAATGAGTTTTTCTTACAACGGTCTGCTTGTTTTGC
ACATCCAGTGTGTTCTGTTACAAtcaattaatttttcaatcGCCGGGAAA
TTAACATTTTAATTGCTTAGTAATTATACGATATAAATGTGATACGTTTT
CGAAATTGGTTCTGTTAATTATGTTCTATAGACTTGTCTTCTCTCTTCGC
CTTTTCATTGTGATGAATGCAAGGTCGTTTTCGCCATGGTGCGTTGTTTT
TTCTTCGGGTGTAGCTtctcactgaaaaatttgaaaattcgtaATGGAGA
ACTATGTATGCTATCTGGATAAAAAGTTATAGTCAAAAcagtttcatcga
ttttttcaGGGTAATGAATGGATCATGTATTAACCACGCTAAAACGTTAT
TTGAAATGTCATTCTTCCTTTTCCAGTAAGACAGGAAAGGGTTGTGATTT
TAGGGTAGTGGgtccaaaatatattttgtctGGTCGGGAGGCTGAAAGAT
ACATGAGATTCTTTATTTCAATTATACTACTTGATACAACTGCTTAACTG
ATTAATGAGAGATGGCAGTTCATTGTGTTCTTCAAATTTTAGCCTTTTTT
GTTTTACATAAAACNTCCTCCTGCAAGAATCTTCTTCTTAATCTTTTATC
CTCGAAGCTCTTATTTAATCACTCCTGATAAATGAATGTGTGTAGCTCTA
TATTTCTGGCTTGATTGAGATATCACATTGTATGTCATTTTACTGTATTT
CGTTTTGAGGAGAGGTTTTGTCATCTTGGGTTCCATTTGAGGTCTTCTAA
TACATTATAACGATAAAGAAAGATTTCGTGAATTTCGTAGCACGAATCAG
GAAGAAGGAACCCTGTTCATTCTCCGATTGAGATGAGATGAGGGAAAGTG
ATAGTTTATTGTATCATTATCGATAATCAAGTCATATCAATGTTACCTGT
GACCCTTtcctttctttataagaacatatattCTTTTAGCTCTCACTTTA
TGGTTCTTACAATCTGAGAACAAGTTTGTACCAGAGATGCATATTCAGTG
TCTTTACAACGGGCATTGCTTTTCCTTGACATGTTGAGTTCGGTGAAGAA
TAGCTGTTATAGTTTGATACGAAGAACGAATGAATGTGAATAAATGAGTT
TTTCTTACAACGGTCTGCTTGTTTTGCACATCCAGTGTGTTCTGTTACAA
tcaattaatttttcaatcGCCGGGAAATTAACATTTTAATTGCTTAGTAA
TTATACGATATAAATGTGATACGTTTTCGAAATTGTTTCTGTTAATTATC
TTCTATAGACTTGTCTTCTCTCTTCACCTTTTCATTGTGATGAATGCAAG
GTCGTTTTCGCCATGGTGCGTTGTTTTTTCTTCGGGTGTAGCTTttgact
gaaaaatttgaaaattcgtaATGGAGATCTATGTATGCTATCTGGATAAA
AAGTTATAGTCAAAAcagtttcatcaatttttttcagggTAATGAATGGA
TCATGTATTAACCACGCTAAAACGTTATTTGAAATGCCATTCTTCCATTT
CCAGTAAGACAGGAAAGGGTTGTGATTTTAGGGTAATGGgtccaaaatat
attttgtctGGTCGGGGGCTGAAAGATACATAAGATTCTTTGCTTCAATT
ATACTACTTGATACAAATGCATAACTGATTAATGAGAAATGATACTTCAT
TGTGTTCTtcattctttcaaattttagccTTTTTTGTTTTACATGTTATA
AACATTTGATGTTTTTGTCTGGTTGCTTTGATGATGATTTCATCCTTTAA
CAACACTAAAATATACATGCTTTGAAACGTTCATTGTATGGTAATTGTAT
CCTTGCTTTAATAATAGTTATGTTTTTATCTGGAGATACGGTGCTTTTGA
ATTAAGATTTTTGTCGTTTCGCTTTGGTGCTTTGTGTAGTTGAGATGCAG
ACCCTGTCATTGTATTTTGTCACTGCGTTGCCTCTAGGGATTTTAGGAAG
TCAAAGATAAGTAAGGATGACTTTATACGTTTTGTTCAAGAAGTGTAAGC
AATAATAGAATAAGCTTGCGTGCAAGTTTATGAATGGTTGCTCCCGAATG
GTTACTCGTTGCTCCTTTGGATCATGGGATTGGTCATCTTTCCATAAAGT
TACCAGCTTCAATATAAAGACAGCTAATTACGTCTATCGCCATatagaaa
tcaaaaaatagGAAACTGCATGAATCAAATGTTTTCCTTCCCATTTAAAA
CCTAACTGAATGATGTGAATGGTGTTGAAGGATTTTCGATTGACCACAGA
GCTGAATGGAACATACATCTCCTCACATTCTTGTGCatctttttgtttca
ttttgattcATTTCGGGCCCATTGAAACACTTGTAATTATTTATCAATTG
ATGAATAAATCATGCAGAGTAGGAAGAATTTTTGTCAACTATAGAAAGGT
TAGTTCAAAAagaaaacaccaaaatataGATTCTGGAGATTTGTGGCCCT
CGTtgtttccatagaaaacaaTGGTATATATTTGTGTGGTGGGAAGTTTC
ACTGTATTGGAAGCATTTACTTTAGAGACCATTGAAGGTTTGACTTCAAA
GCCCCAATGTGTCTGAATTGATAGGCGTTCTCCTTTGCGTTCGAATCGGT
AGATaatgtattttgaaatttcgctATCAAGTTTTTGGTTGTGAGGATTT
TAAGAAAAGAAAGTGAATCTACTTCCTCCCATTTCTTcgtaaaagaaaat
ttatttggaCATTTTCTCACATGGCAGTCTATTCCTCCCAAATAGTCTCC
AAGATTGTGAATATTACTCTTCGTCTAAGGACAATCAAAATCACATACTT
AATTGGTTATCAATGGCAACTCTCGAAAACAGGTCATTATGTCTAATTAC
TTTGAAAGCAATACTGTATGTACATCGTTTGCTTaaatttggaaaacatt
tttaggcgaaaattcaaaaagttaagaacatccgagggcttaaaaaattt
tggaagttgttataaaattttttggaggttttatattttattctttGAAC
CTTGTACCAATTGTGTATTGTAAGTAGTTGGTGATTGTAATTGTTTCCAG
TTTATAAAACAAGACAAGAAAAGTCTTTGGGTATTCAGTGTACTGTATGT
GGTAAATTGGTTTCCAAACTACAAACTTTGCGCTTCTTCCCACTATCAAA
CAGGTCCTCGATATTCAAATGCCAAATTCAGAAAGCCTTTTGAGTGTGAG
GAGTGTGCTTTTCTTGGAGCACTGTTTTTGAGTACCACAAACTTGACACT
TCCCTTCAAACAGTTTGATATCTATCTGTGTTATGATTTGGATAAAACGT
ACTTGTGATGAATACACGTGTGTTTGATGGAACATTTATTCAAAACATTC
CCTTCTCATCAATATTTACTTACTTTTTTAAGAAGTcttaattctttatt
ttttcatcatcacatatttacatttttgatttcatttttttcaacaaatt
ttttccTCCTTTACTTTACAACGTTTCATGTTCGTCCATTTTCTTTATTG
AGTTCTtgatttatcttttcttttctttctttgttgttGTGTGTGTGAAG
ATCTTATGGTTTTCGTCTTCTTTCTTCCCCTTTTCATCCTTCGACCTCAT
CGTTAGATATTATGTTTACTTGGAACAACCAATTTTCCACGTCCTGGGGT
TATCATGGCGATTCTTGGTGACGGTTCTGACCAACTACAGAATAACAGGA
AACTATTTGAAATAGAATTTGTATAAAACTATACAgagatatttttttct
tctcttcttaGTTTAAAATTGACGTATTGGTTTTAGCGAGTAAATTCCTT
TTGGGGTAAATTTTGGACCCATTTTCCATATATGCTGGTTGTTTACTGAT
TTGAATTCCTTTTGCGCATAAAAGGAGTTCTGGAAACGATCTATTGCAAA
Cacatcaaaattaaagtgaataaacagtacacgcttttttttataagaat
ggtgtttttcatttcatcatggatattcttaactttttggcgaaaatatt
cttacgctattcttaggttaagatcgaaattggcaatctacaggttaaaa
tgcattaaaaatggcattcttaggttcagttgctaaacttcatgatggtg
atattcttatcatattcttaatttttcggccattttcatcatggacattc
ttatgaagtttattcttataaaaaaaaaaagcgtgtatgtggAACATGGT
TTTCGTGTACTGTACTTCACACATGTAGAATTAGGGCTTTTAGTTCGTTT
CATGTCATTTTGGTGTCAAGAAATGACGAGCACAAAGTTCGTTCTTTATC
ATCGCATACAGTAGATCATGTTTATTATACAATGGCTCAACATCTTCTCT
TGAACGTTCAGTTTTATTAGTTATGATAATGTAGATCATAATTGCATCAG
TTTTGTTTAATTCCTTTATGTCAAATAGATTAATGCACTTATGTAGACAC
ACACATCACTTGCTTTGCCTGCCCAATAGCTCTCTTTCTCTTGTCCACAA
CAGCTTGTAAAGATAAGTGTATTACAAAGTTATAATTAGGAAATTGAagc
tttttttctcttttcagaacattttttatatacattttgAAGTAATTTAA
ACAACAGCAGAGGGGTATTATCTGATTTTTATAGTTCCATTTCTAAAACT
GGATGGATAAACTTATGGTAGgggagaaaataaaaattaatatcacaaag
aaacattttaaagaaagagaagatatAGAATAGAGGTTTGGAAAAAGGGT
TGACTAGCTGAGAGAAACCTTAAACACTGTTTTTATGTCGAAGGgttttt
tttctatgaaatatTATTAGTAAGGGtacaaaattgattaaaaaaagaaa
tgagcttaaaatgttattactagaagtgaaaaaaaatccaacaagCTGAG
AATTGACTGCGAGAGACTGTTGGTTGGAGGTGGATTCTTTTTAGTAATGA
TTTATGTCATGCTTAGATAGTTTATATCATCTTACAAGTTTGAGTGTGAT
GGCGATATATAcatttatcggcgatccaaaaaatatctgcaatctgattg
gttaaaaagagtacaatatatcNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNgtcaccgataaaccagttatca
gacatttgctcgtacaatatggaaatattttactcgttccgtattttccg
tatattttcctcgcctaaaggctcggataTGACATGACATGCTTAGATAG
TTTATATCATTTTACAAGTTTGAGTGTGATGGCGATATATACATATATTG
TAAAAAGACCTAGTGATACatgtcttaaactcatttattGGCTGATGTTT
GGTTTTATGAAGTTtcctttaaagaaaatttggGCTTCCCTTATTCGATC
ATATTAGTAGTATTGATGGTTCATTGACGGAAAGAATAATATATCTAGCA
ATACTCTTGCAATTATACTAGTAACAAGGCTAGTATAGCTTAAATTCACT
GTAAAGTCACTTTCTCTTTGAGCAGGTTTAGTACGTCGTTAAAAAATCGA
TCTAATAGTAGAACGTCCAGTGAAAGATTTATAAACGTTGTCATCTTACA
TCACAAGCAAGTGATCAGGGAATGAATGACGTGATAACTTGAATTTACAT
TGCATTATTCAGTTAACTCAATCGTTGATCGGACTTTTCTTTGAGTGAGA
ATGTTTTTCGTTCTGAAAGAGTGACTCAAAGAAATCGAGTTACGCGAAAA
TCTAGCTGTAAACTTCCTATCGcaatcgaatttttttttgaagttacTAT
GTGTTTATCTTGTTTGCATCTCGAGTCAAAAGACAACAAACAAAGCCCTC
TTTTGACTGTAATCTAAGAATGGCTAAAAAATGTCCTATTTTCTCCCCAA
TGTTTATCTTTGACACTTGTATAGCGAGTACATAACATTTCAGGACTCTC
AAAACACACTCTAAAATGATATATCCTCCTTCATTTCAAACCTCCTATGA
AAATAAATATTGCCACGACCAAGTTGCTTTCGATATAAGAATCGAAAATG
GTTGAAACTATGGTAGTCGATACACCATTTTCAGTATATACTGTATGATC
CTTTATAGAAGCTTCTTATTGTTTGCCAGACAAAATAACAGTACAGCACG
GAATGTCAGATTGAAAtattaatattttttgtaaCAGTACACCATACCAC
ATGAAAtcttatttgaaaacattaatcCATGTGTATTTCAAGAGATATTA
TGAAGTCAGaatgtgtgcttataaaaaaagttttattttacgTTATGTTG
ATTTAAGATtgagtttgttgttgttttttggtttctaaaaattctcTTAC
TTCTTTACAAATTTTAATCGATGCGTTTCTAAGTGGATTTTCTTGTAATT
TGTGTCTCTGTGAATGGGTTTGTAGTATCAATCGCTCTGTGACTGTGTGC
TGAGTTCTATGAAAAATCAAGTCTTTCTTTTGAGGTTCTGAAGTCTCATA
AGACAGTTTTTGATTTGGTTTAGCTGACTTTTCTGAAGTGCTTGATTTTA
GGTCtgttttgtgaatattttaaTTTGNCTGACTTTTCTGAAGTGCTTGA
TTTTAGGTCTGTTTTGCGAATATTTTAATTTAAGTAATTAAACACTCCTC
GTTCGGATCTCAACGATCACTAAATCTCGATTCATTTCAACTCCAGCAAC
ACTGTCTAACTTCAAGGAACTTAAACTTTAAATTTGTCATCTTCTATTAT
CCATAGGAAATAGTAAAATCAAGTCAATCGATGAATTCGCTTCATTTCTC
ACCACGTGACTCGGTCACAGTCCACTCGCTATCACCCACCGAGCTTTCAC
GTTATGGCTCCTCTTACCCTCCTGGTAGAGGACACGTGCATGGACCCCAG
ACCTCATGCCCCGTACACGGTCAAGAATCAAGTCATCCCCACGATGAACG
AAATGGCCGTCCGCCAAACCTTCCGTTCGATGCGCCGCACGGCTTCCATG
GGTTACACGGGCCGCATCCTCGTTTTCGTGAAGACATTTACATGAGACGA
CATTCATTAGATGTAAGTTTTCGTTGTTTTCCTCACTTTTAGATCAGTCC
TTCTTTCTTTTAATATAAACTTGGACATGTATGATACTATTTTACAAGCC
TTCGTATTGAGAAGATTCGATACACAAAGGTTGCCAATATGAATAGATTA
CTGAAACTGTGATTAGTAAATAAACATTGTTTCTTACTACATACTGTGAT
GCATCTGGCAATCCAGATGCTCCTTTATCGATCTCAACTGAAtgtataac
ttttgttttcattcctTTCCAGCGTAAAGAGCATTTACCGCCCCCACCCC
ATCACGCCTTAGAAGAAGACTTGCGAAGAAGAGGAATGGATTTTAGAGGT
TTTGCTGGTTTACCGCCCCATCTCTTGGATGAGCAATACAGGCGTCATTT
GTTGAATGGAACGCATGAACACCCTCCACCCTTCAAAGTAAGTCtaaatt
actttttctttagaagttttgcttAACAAAAATGAATGAACTTAATTATA
TAACTATTTAATAAAACAATcgaaaaagttatatttttccgGTTTTCTTC
ACTAGGAACCAGGACATGGACAAGTCTTTGTTCCACCGCATTTCTATTAC
GGTCGTGAATATCCGCTCCCGGTTGACCCCTACCATCCGCACGCGTTATC
CGCAGCGCCGAGTGAACTTCTTCACAGATACGGAGGTGCACCTCCACCGG
TCAGTCCCAGGCTACTAGAAGCCTATCGACGTAATGAGCATGGTGTTTTG
AGCTCGCGCGAATTCGAAGCGGCCGAGCGACGATATGAAGAACGCCGGGA
GAGTGCTGACCAAAAAGAAAGTGTTATTCGACCAGCTTCTATCGATCTCT
ACCGCAAGAAGAGTGCAGAAAATCATATGCACGGTAAGAGAATCCTCTTT
TTTTTCGAATGTCTTGTTTAGATTTCTATTTTCGTTTTCTCAAGTGCAAG
TCAAGATGTACAATTGTTTTCAAGATGGTTGTGAAAAACCTTTCGAACTA
TCCAATTGAAACAtggatttttatgttttcagaTCGTCGTAAACACAGTA
TTTCACTGGACAAGAAACCAGTCGTCCACGAAAAAGAGGAACCACCTCGA
ATGGTATGTTTTTTTAATCTCACTTGTATTGGCATCATAAAAGTATAACG
AGTCTGGTTGGAAGGTTGTGGTGATGATTGTGACTATGATTTCGAGAGCT
TTTCACTGCCCAAAATGTGTTTTTACCAGATCTCTCACCGAGTGTTGGCA
TATGATGTTTGTGTCCTTTTGCGAGATTTTGGTGAAGATTTTAAATCATG
GCTCGCAGTTGATGATGAGTTCTCTCAAACAGGAATTGTTAAAAAAGTTC
TCGTTTTCTCTATTTTTCGTAGAAGATGCCCATTTTCAAAGGTTTGGAAT
GTAACAATAACAACATCAAACCACACCCTAAACAAAATGGTAAACCACAT
GATTTTTATCGCAACCCTTGAGTCAAATAATATTTTACACAAGATAGCAT
ATATTTAATGTGTATGTGAATTGGAACACTTTCTTTGTTAGTCTTTGAAC
GGAGTATTGACAAGATGGGTCACTATACCTAACTACTGTATGATATTCTC
TTTCCTTCTATATAGCTATTCCTTGCAAcgattgaaattcttttttctta
tcCAAGGTACATCACATCAAGCCAACTCCATCACCTCGCTTTTAAACAGC
AAGCTGCCGAACTCTAAAAGTGAATTAGATGCGGCCAGTATTCTTGCCAA
CATGAATCGAATCAGCCAATCACCAGCTTGCTCAGATGAACAGGAGAGTA
TCACCAGTAGTTCAGCCCCTGAAGTGATCCCTCCAACGCACATCAAACAA
CAACCATTGATCAAAGAAGAAGACAAAGAAAATGTCGAAATCGAACAACC
TGAAGAGGTATAATTTCCTCATGTCTTCTTATCAGAAGATTTGACATTTA
ATAAAGAGTCTAATACGGAAGAGCGTAGAGAAAACTTCATATGCTAATTA
AGAGAATCTGGTGGTTGCAAGGCACGCTGTAGATACAAAGCCCTTTAAAT
TTCACATTGCNACGGTAAGAGAATCCTCTTTTTTTTCGAATGTCTTGTTT
AGATTTCTATTTTCGTTTTCTCAAGTGCAAGTCAAGATGTACAATTGTTT
TCAAGATGGTTGTGAAAAACCTTTCGAACTATCCAATTGAAACAtggatt
tttatgttttcagaTCGTCGTAAACACAGTATTTCACTGGACAAGAAACC
AGTCGTCCACGAAAAAGAGGAACCACCTCGAATGGTATGTTTTTTTAATC
TCACTTGTATTGGCATCATAAAAGTATAACGAGTCTGGTTGGAAGGTTGT
GGTGATGATTGTGACTATGATTTCGAGAGCTTTTCACTGCCCAAAATGTG
TTTTTACCAGATCTCTCACCGAGTGTTGGCATATGATGTTTGTGTCCTTT
TGCGAGATTTTGGTGAAGATTTTAAATCATGGCTCGCAGTTGATGATGAG
TTCTCTCAAACAGGAATTGTTAAAAAAGTTCTCGTTTTCTCTATTTTTCG
TAGAAGATGCCCATTTTCAAAGGTTTGGAATGTAACAATAACAACATCAA
ACCACACCCTAAACAAAATGGTAAACCACATGATTTTTATCGCAACCCTT
GAGTCAAATAATATTTTACACAAGATAGCATATATTTAATGTGTATGTGA
ATTGGAACACTTTCTTTGTTAGTCTTTGAACGGAGTATTGACAAGATGGG
TCACTATACCTAACTACTGTATGATATTCTCTTTCCTTCTATATAGCTAT
TCCTTGCAAcgattgaaattcttttttcttatcCAAGGTACATCACATCA
AGCCAACTCCATCACCTCGCTTTTAAACAGCAAGCTGCCGAACTCTAAAA
GTGAATTAGATGCGGCCAGTATTCTTGCCAACATGAATCGAATCAGCCAA
TCACCAGCTTGCTCAGATGAACAGGAGAGTATCACCAGTAGTTCAGCCCC
TGAAGTGATCCCTCCAACGCACATCAAACAACAACCATTGATCAAAGAAG
AAGACAAAGAAAATGTCGAAATCGAACAACCTGAAGAGGTATAATTTCCT
CATGTCTTCTTATCAGAAGATTTGACATTTAATAAAGAGTCTAATACGGA
AGAGCGTAGAGAAAACTTCATATGCTAATTAAGAGAATCTGGTGGTTGCA
AGGCACGCTGTAGATACAAAGCCCTTTAAATTTCACATTGCCATTGCTCT
CCtaatcaaaaacttttgttttactTTACAGAAGCTGAATTATTTGTTAA
ACCTCGGATTGGTCATGCATTCTCGAAAAAGAAGTAAGTTCTCTCTCCTC
TTTTGTTAGATTCGTAGTCGAACTGGAATTTATTAGCGAATATTAACTAA
GGTGGTTTCTTCTTACTTTCTTCATTTCAttaattttcatatttatttAG
TTTTAGAGGAAGAATTTGAGAGAAAACGTTGGGATCGCAAATTTCGAAAA
TATCGTGGACGACCGAAGAAAAGATCAAAAAGAGAGGTGTGTTGTCTTTG
TTGGTATTTTTAGGGATTTTGACAGCTCTTTTGAAACGTTGCATAACACA
AATTCAGAGTGAAAAGAACTAGCGATAGATCCATTTCAATCTCATTTTTC
CTAAATCTGTAGTTATGACTTTGAAATCCATTTAAACaatttaatattta
tgttttctAGAACACCGAAGAAGGTAGTGTTAATGGTGACTTGAGACCTG
GATCTGATCTTGATTTTTATAACGGGCCCATGACCAGGCACAAGCAACAA
CTCTTACAAGAACAAGAGAACTTACTGGAACAAATTCAAAAACAGAACAG
TACAGAGAACAATTCTGAGAACGTTCAGAGTCCAGGGGAAAACAGTAACC
CTGAGACAAATAAAGATAATCAAAGACCCGCATCAAGAAGTAGCGGCAAG
AGCAAAAAATCTCCGCGAAACTCTCCCCGTAAAGACTCGATATCGAAAAG
CTCTTCTAATGGGGACGCGGCAGTTGAAAATAACGACAACCAAACGACAA
ATGTTCCGACACCTACGGTTTTCATTAAATCGGAAGAAAACTTATCAACA
TCGTCACGAAAATCAACTCCGACTCCGACCAACCATCATGCGCCCAAAGA
GTCGTCGGTAATTGGCACCCACGACAATTCTCACCGCCAAGACGAACGAC
GTCAAACAAACGACCGCTCTGATCGCCTCATGACACTGATCAAAGATAAG
GTTCACCCTGTACCGGCCCCTTCGCCTTCATCGGCCTCGTCAAGCCACCA
CCGGCATCATCCACACCATCATCTGATGGATAAAAATCATCTTCTTCATC
GACAGCCCTCTCCACATCCCTCGTCGTCCTCTTCACATGAACATTTAAAA
AGGCATTCTTCTANGGCGGAACATGCAAGTGAGCATCGAAGGTGTCCATA
AAGCACTACGTTCCATGTCTGATTTATAGGATTGACATTCGCTTATCTTT
TTCAAGTTTGTCCTTTTAGTTTAGTCTTTAGTCAAgttttcaatcttttt
attGCGTGTAAAATCTGGGGAAANCCACCGGCATCATCCACACCATCATC
TGATGGATAAAAATCATCTTCTTCATCGACAGCCCTCTCCACATCCCTCG
TCGTCCTCTTCACATGAACATTTAAAAAGGCATTCTTCTACATCAGCCAA
TAATAGCGCGTTTAACGATCACGTGCCACGTCCTTCGTCCAATCATCACG
CTTCATATGCTGAACACGTGGAGGAGATGAGGAAGTTGGACAGCAGTTTA
TTTGGTAGACACATGGTAAGCCTATTCAATTCATAAATTCTAGTAACTGA
CGAGAGCCTTTTTCTGGTCAATCTGCTAGGATTGTTTTTCACTAAGTAAA
GTTTTCGTCGAGCGGTCAGTAGTTGAATGAGTGAAATGACTCATGAATCA
TTGGTGATACGGTTAAAAATAAGGGTTTCTCTCACgtgaatattttttca
ttttattaggaACCGACACAAGACCATTTCGCTCGTTGGCCAGGAGTCAA
TTACATTCAACATGCATATACTTCGTATTTAAAAGGTAAAAGAACGTCGT
TTTCTCACAAAAAAAATGGTTTGGTTGTGCTCGGGCGCCGCGGGAGAGAC
CTCTTGAATATAAATCTTCATTATTAGACAAGGtcttattgggctcttcc
ag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006961XLOC_006961Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012378-exon-sc0000144-1491911889:138668..138763TCONS_00012378-exon-sc0000144-1491911889:138668..138763Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:138668..138763TCONS_00012378-exon-sc0000144-1510915933:138668..138763Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:138668..138763TCONS_00012378-exon-sc0000144-1575043694:138668..138763Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:139387..139446TCONS_00012378-exon-sc0000144-1491911889:139387..139446Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:139387..139446TCONS_00012378-exon-sc0000144-1510915933:139387..139446Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:139387..139446TCONS_00012378-exon-sc0000144-1575043694:139387..139446Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:149174..149479TCONS_00012378-exon-sc0000144-1491911889:149174..149479Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:149174..149479TCONS_00012378-exon-sc0000144-1510915933:149174..149479Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:149174..149479TCONS_00012378-exon-sc0000144-1575043694:149174..149479Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:149740..149904TCONS_00012378-exon-sc0000144-1491911889:149740..149904Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:149740..149904TCONS_00012378-exon-sc0000144-1510915933:149740..149904Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:149740..149904TCONS_00012378-exon-sc0000144-1575043694:149740..149904Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:150023..150350TCONS_00012378-exon-sc0000144-1491911889:150023..150350Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:150023..150350TCONS_00012378-exon-sc0000144-1510915933:150023..150350Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:150023..150350TCONS_00012378-exon-sc0000144-1575043694:150023..150350Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:151681..151751TCONS_00012378-exon-sc0000144-1491911889:151681..151751Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:151681..151751TCONS_00012378-exon-sc0000144-1510915933:151681..151751Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:151681..151751TCONS_00012378-exon-sc0000144-1575043694:151681..151751Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:152021..152087TCONS_00012378-exon-sc0000144-1491911889:152021..152087Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:152021..152087TCONS_00012378-exon-sc0000144-1510915933:152021..152087Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:152021..152087TCONS_00012378-exon-sc0000144-1575043694:152021..152087Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:152305..152555TCONS_00012378-exon-sc0000144-1491911889:152305..152555Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:152305..152555TCONS_00012378-exon-sc0000144-1510915933:152305..152555Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:152305..152555TCONS_00012378-exon-sc0000144-1575043694:152305..152555Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:152749..152800TCONS_00012378-exon-sc0000144-1491911889:152749..152800Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:152749..152800TCONS_00012378-exon-sc0000144-1510915933:152749..152800Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:152749..152800TCONS_00012378-exon-sc0000144-1575043694:152749..152800Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:152918..153003TCONS_00012378-exon-sc0000144-1491911889:152918..153003Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:152918..153003TCONS_00012378-exon-sc0000144-1510915933:152918..153003Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:152918..153003TCONS_00012378-exon-sc0000144-1575043694:152918..153003Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:153178..154282TCONS_00012378-exon-sc0000144-1491911889:153178..154282Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:153178..154282TCONS_00012378-exon-sc0000144-1510915933:153178..154282Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:153178..154282TCONS_00012378-exon-sc0000144-1575043694:153178..154282Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1491911889:154477..154669TCONS_00012378-exon-sc0000144-1491911889:154477..154669Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1510915933:154477..154669TCONS_00012378-exon-sc0000144-1510915933:154477..154669Clytia hemisphaericaexon
TCONS_00012378-exon-sc0000144-1575043694:154477..154669TCONS_00012378-exon-sc0000144-1575043694:154477..154669Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:138668..154669 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.247498	0	0.0401822	0	0	0	0	0	0	0	0	0	0	0.0339999	0	0	0	0	0	0	0	0.221802	0.176604	0	5.55779e-10	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012378 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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