TCONS_00012376 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012376
Unique NameTCONS_00012376
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2542

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012376 ID=TCONS_00012376|Name=TCONS_00012376|organism=Clytia hemisphaerica|type=transcript|length=2542bp
CTTTTATTGGGTCTATATATGAACAGGATTAGATAGTTGATTCGTTTTGG
GCTAGGATTCACTATGTTTCATTCCTATGATCACTTTCCCCAAAAGAAAA
TGGCTTTTGAAAGTCTATATTTGGATCAAAGGCCATCAATAGGATTGGTT
CATCCACAACCGCAACGAAAACATCGAGACGAGGAAATAGTAAAATCAAG
TCAATCGATGAATTCGCTTCATTTCTCACCACGTGACTCGGTCACAGTCC
ACTCGCTATCACCCACCGAGCTTTCACGTTATGGCTCCTCTTACCCTCCT
GGTAGAGGACACGTGCATGGACCCCAGACCTCATGCCCCGTACACGGTCA
AGAATCAAGTCATCCCCACGATGAACGAAATGGCCGTCCGCCAAACCTTC
CGTTCGATGCGCCGCACGGCTTCCATGGGTTACACGGGCCGCATCCTCGT
TTTCGTGAAGACATTTACATGAGACGACATTCATTAGATCGTAAAGAGCA
TTTACCGCCCCCACCCCATCACGCCTTAGAAGAAGACTTGCGAAGAAGAG
GAATGGATTTTAGAGGTTTTGCTGGTTTACCGCCCCATCTCTTGGATGAG
CAATACAGGCGTCATTTGTTGAATGGAACGCATGAACACCCTCCACCCTT
CAAAGAACCAGGACATGGACAAGTCTTTGTTCCACCGCATTTCTATTACG
GTCGTGAATATCCGCTCCCGGTTGACCCCTACCATCCGCACGCGTTATCC
GCAGCGCCGAGTGAACTTCTTCACAGATACGGAGGTGCACCTCCACCGGT
CAGTCCCAGGCTACTAGAAGCCTATCGACGTAATGAGCATGGTGTTTTGA
GCTCGCGCGAATTCGAAGCGGCCGAGCGACGATATGAAGAACGCCGGGAG
AGTGCTGACCAAAAAGAAAGTGTTATTCGACCAGCTTCTATCGATCTCTA
CCGCAAGAAGAGTGCAGAAAATCATATGCACGaTCGTCGTAAACACAGTA
TTTCACTGGACAAGAAACCAGTCGTCCACGAAAAAGAGGAACCACCTCGA
ATGAAGATGCCCATTTTCAAAGGTTTGGAATGTAACAATAACAACATCAA
ACCACACCCTAAACAAAATGGTACATCACATCAAGCCAACTCCATCACCT
CGCTTTTAAACAGCAAGCTGCCGAACTCTAAAAGTGAATTAGATGCGGCC
AGTATTCTTGCCAACATGAATCGAATCAGCCAATCACCAGCTTGCTCAGA
TGAACAGGAGAGTATCACCAGTAGTTCAGCCCCTGAAGTGATCCCTCCAA
CGCACATCAAACAACAACCATTGATCAAAGAAGAAGACAAAGAAAATGTC
GAAATCGAACAACCTGAAGAGAAGCTGAATTATTTGTTAAACCTCGGATT
GGTCATGCATTCTCGAAAAAGAATTTTAGAGGAAGAATTTGAGAGAAAAC
GTTGGGATCGCAAATTTCGAAAATATCGTGGACGACCGAAGAAAAGATCA
AAAAGAGAGAACACCGAAGAAGGTAGTGTTAATGGTGACTTGAGACCTGG
ATCTGATCTTGATTTTTATAACGGGCCCATGACCAGGCACAAGCAACAAC
TCTTACAAGAACAAGAGAACTTACTGGAACAAATTCAAAAACAGAACAGT
ACAGAGAACAATTCTGAGAACGTTCAGAGTCCAGGGGAAAACAGTAACCC
TGAGACAAATAAAGATAATCAAAGACCCGCATCAAGAAGTAGCGGCAAGA
GCAAAAAATCTCCGCGAAACTCTCCCCGTAAAGACTCGATATCGAAAAGC
TCTTCTAATGGGGACGCGGCAGTTGAAAATAACGACAACCAAACGACAAA
TGTTCCGACACCTACGGTTTTCATTAAATCGGAAGAAAACTTATCAACAT
CGTCACGAAAATCAACTCCGACTCCGACCAACCATCATGCGCCCAAAGAG
TCGTCGGTAATTGGCACCCACGACAATTCTCACCGCCAAGACGAACGACG
TCAAACAAACGACCGCTCTGATCGCCTCATGACACTGATCAAAGATAAGG
TTCACCCTGTACCGGCCCCTTCGCCTTCATCGGCCTCGTCAAGCCACCAC
CGGCATCATCCACACCATCATCTGATGGATAAAAATCATCTTCTTCATCG
ACAGCCCTCTCCACAGCCCTCTCCACATCCCTCGTCGTCCTCTTCACATG
AACATTTAAAAAGGCATTCTTCTACATCAGCCAATAATAGCGCGTTTAAC
GATCACGTGCCACGTCCTTCGTCCAATCATCACGCTTCATATGCTGAACA
CGTGGAGGAGATGAGGAAGTTGGACAGCAGTTTATTTGGTAGACACATGg
aACCGACACAAGACCATTTCGCTCGTTGGCCAGGAGTCAATTACATTCAA
CATGCATATACTTCGTATTTAAAAGGTAAAAGAACGTCGTTTTCTCACAA
AAAAAATGGTTTGGTTGTGCTCGGGCGCCGCGGGAGAGACCTCTTGAATA
TAAATCTTCATTATTAGACAAGGtcttattgggctcttccag
Run BLAST on NCBI

transcript from alignment at sc0000144:138641..154669+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012376 ID=TCONS_00012376|Name=TCONS_00012376|organism=Clytia hemisphaerica|type=transcript|length=16029bp|location=Sequence derived from alignment at sc0000144:138641..154669+ (Clytia hemisphaerica)
CTTTTATTGGGTCTATATATGAACAGGATTAGATAGTTGATTCGTTTTGG
GCTAGGATTCACTATGTTTCATTCCTATGATCACTTTCCCCAAAAGAAAA
TGGCTTTTGAAAGTCTATATTTGGTGAGATGTTATTACTGCGATTCTTTA
TTTCTCCCTCTCAGCCAGAGTTGAAAACAATGAATGACTTTTGATCTTGC
CATCAAAACTAGTTCAACTACCCTTTAATGCATTCTACGCAATTTTACTG
AAGTTGAAATTTTAGTCTCGCTCTCACTCACTCATCCTTTTCTACTTTCC
CTCataccaaaatttttcaaatctatgaataaataagatttttgaagccg
aaattcttttttttaatgctAGTTTCGTCCCATGCTTCGTGATCAAAATA
GCCAAGACTTTAATATGTTTTCTTTTGGTCTAGTTTTAATTGAtgccttt
ttctttcttcttcgtGGACAGGATCAAAGGCCATCAATAGGATTGGTTCA
TCCACAACCGCAACGAAAACATCGAGACGAGGtatgtcaagaatattttc
ccTTTTCTTTAGTTTGTAGAATTTCTGCATCATGTAGANTTTCAAATCTA
TGAATAAATAAGAGTTTTGAAgccgaaattcttttttttaatgctAGTTT
CGTCCCATGCTTCGTGATCAAAATAGCCAAGACTTTAATATGTTTTCTTT
TGGTCTAGTTTTAATTGAtgcctttttctttcttcttcgtGGACAGGATC
AAAGGCCATCAATAGGATTGGTTCATCCACAACCGCAACGAAAACATCGA
GACGAGGtatgtcaagaatattttcccTTTTCTTTAGTTTGTAGAATTTC
TGCATCATGTAGATGTGAGGCTTTTTTGTCTTATGAATTCACCAGACTTC
ATCGTAGAACTTTTCACTAAAACTGTGATTACAGAAACAACAAGGATATA
CAAAAGTCGAGCTTAGATGGGATACACTGCTAGTTTGACCCTGAGTTACA
GTTACAGAATATCATCATAACAGTTTATTTTTCCAAAGCGGAAATAACGC
TTACTTAATGTTTACTGCTAAACATTTCACCAGatgaaataatgaaatca
tgACATGTTTGTTGACTTGAAAGTATCGTCTGATAACAAACTGTGTTTCA
TTTAACAAAAGAAGCAAGCACTTTATGATGGCAGAATGACTGTCAAGGTT
TTTTATGTTACAATTGGAATCAAGAACATTGCGTGGCTAGTTCTTCAACA
GAGCATGATCTTAGTTGTACCTAATAACGTGCCTTGTGCAGGACGTATTA
CTTATGTTTCTTATACAAAATAGTCGCTAAGTGATGAAGTGTCCTTGGTG
AtataacgttttttttattgttgCTTTTTTACATCACTGCACCACCGTAA
TACATTATTGTTTACAGAATCAACATTGAGAAACGTACAAACATACCTCT
TTTCATTTCTCTACGTCTACTGACAACTGACAGCTGGCTTATGATGATAC
ATTATATAGTGTTTGGTTACTGTTAGCAAGTGTATGtatcttaacttttt
gatgACGAAGGAGAGACTGAAGTTTGGTAAACCTGCAATATTGACACGGA
AAGTAGAGGCCGGTAAAAGCATGGGAATAGTCTTTGGTTGATCAGATTTG
AGCACTTTTTAGGTCAAAACTTTCCTCTTACGAAAGCTTTGGAGGCTTCA
ATTTGTAGAACTAACAATGGAGCTATCTTTCAAatcagtggcgtggtggc
agggggggaccagcccccccccagcggagcccttttgagaaggggcgccc
aaaaataagggacgccaagaaggatttttcaggcgcccatatcgaaagat
tgacaaatgaaaaaacaaaaatggcgcccctcatcaactcaaaattttct
ggctcgcttcgctcgaacactcccttttttgtgttcataatgagcgtata
gagagaagcgccaaaaacaaaaaatctttaaaaagggcgccatatttgcc
ttggccaccccagagaaattttaCCACCACGCCACTGTTTCAAATGCAAA
CCATATGAACAACGTAAATTCAGTGCGCAATATGATAAGATGATCTCTAC
GTTAATTGCAACTTAATGCTCTACGGTTTGCAGCAATATATCATGACAGA
CTTGTGTATGAACAATTGTTCAGTATTGAGAAGGTTCGAACCTAACTGAA
ACTTAAAAAAGTTGTCTCCTGTACCATTTGCGATTCCGTCAGGCTCTTGC
TTCACCGCAACTGATAGCATAACCAGCTTATTATGCAATGACCCCTGTTT
TCAACAATGAACCAATCACATGGCGATTATGCGACTGTTAAGCTTTTCTA
ATCTCTGACAAAATAAAGTAACCATTAAAACTTTattatgttatcttttt
atatGTATGTATATTCTTTTACAATGATTTTTATCAGCTTGCCTCTTATA
AGAATCATGGTACTTTCGAAATGTACCAACTCGGAGATGTCTTTtgggat
tttgaaatttttaaaattagtGAAGATGTTAAGAATATAATTTCAACGTG
TTCTTACTGAAACTTGGCTTACACTTTATccattttcgcaaatttttcaG
TCAAAGAGGTCAATTCTATTGTTTGAAATTCTTATGAAAGACTTGGTGAT
TTGTCAATCAAAACGAAACACACATCGAGGTCAGGTTGTAATCAACCCTT
AATGTTATCACATACATACATTTACATGCTAACAAAGAGAGAAAAGAAAA
CCATTTACTAATTTCTTATAAAAGGCTTATATGTCAGTCATCATCGAGTT
TTGCTGGTTTTCTCTTGAAAAGCTCttagacaaaatttgacaatGATCTT
TAATCAGAAAattgttgtgtcaacttgtagtagttaaaatttggttatgt
gatgaaagtttttcatttgtagTTTTTGGTTAAGTCTTCCGAAGATATGg
ttgtcattttttaattttgatttcatttgcTTAGCCATTAAAACTTTAGA
TTTGGCATGATATCTTCCTCCTGCAAGAATCTTCTTCTTAATCTTTTATC
CTCGAAGCTCTTATTTAATCACTCCTGATAAATGAATGTGTGTAGCTCTA
TATTTCTGGCTTGATTGAGATATCACATTGTATGTCATTTTACTGTATTT
CGTTTTGAGGAGAGGTTTTGTCATCTTGGGTTCCATTTGAGGTCTTCTAA
TACATTATAACGATAAAGAAAGATTTCGTGAATTTCGTAGCACGAATCAG
GAAGAAGGAACCCTGTTCATTCTCCGATTGAGATGAGATGAGGGAAAGTG
ATAGTTTATTGTATCATTATCGATAATCAAGTCATATCAATGTTACCTGT
GACCCTTtcctttctttataagaacatatattCTTTTAGCTCTCACTTTA
TGGTTCTTACAATCTGAGAACAAGTTTGTACCAGAGATGCATATTCAGTG
TCTTTACAACGGGCATTGCTTTTCCTTGACATGTTGAGTTCGGTGAAGAA
TAGCTGTTATAGTTTGATACGAAGAACGAATGAATGTGAATAAATGAGTT
TTTCTTACAACGGTCTGCTTGTTTTGCACATCCAGTGTGTTCTGTTACAA
tcaattaatttttcaatcGCCGGGAAATTAACATTTTAATTGCTTAGTAA
TTATACGATATAAATGTGATACGTTTTCGAAATTGGTTCTGTTAATTATG
TTCTATAGACTTGTCTTCTCTCTTCGCCTTTTCATTGTGATGAATGCAAG
GTCGTTTTCGCCATGGTGCGTTGTTTTTTCTTCGGGTGTAGCTtctcact
gaaaaatttgaaaattcgtaATGGAGAACTATGTATGCTATCTGGATAAA
AAGTTATAGTCAAAAcagtttcatcgattttttcaGGGTAATGAATGGAT
CATGTATTAACCACGCTAAAACGTTATTTGAAATGTCATTCTTCCTTTTC
CAGTAAGACAGGAAAGGGTTGTGATTTTAGGGTAGTGGgtccaaaatata
ttttgtctGGTCGGGAGGCTGAAAGATACATGAGATTCTTTATTTCAATT
ATACTACTTGATACAACTGCTTAACTGATTAATGAGAGATGGCAGTTCAT
TGTGTTCTTCAAATTTTAGCCTTTTTTGTTTTACATAAAACNTCCTCCTG
CAAGAATCTTCTTCTTAATCTTTTATCCTCGAAGCTCTTATTTAATCACT
CCTGATAAATGAATGTGTGTAGCTCTATATTTCTGGCTTGATTGAGATAT
CACATTGTATGTCATTTTACTGTATTTCGTTTTGAGGAGAGGTTTTGTCA
TCTTGGGTTCCATTTGAGGTCTTCTAATACATTATAACGATAAAGAAAGA
TTTCGTGAATTTCGTAGCACGAATCAGGAAGAAGGAACCCTGTTCATTCT
CCGATTGAGATGAGATGAGGGAAAGTGATAGTTTATTGTATCATTATCGA
TAATCAAGTCATATCAATGTTACCTGTGACCCTTtcctttctttataaga
acatatattCTTTTAGCTCTCACTTTATGGTTCTTACAATCTGAGAACAA
GTTTGTACCAGAGATGCATATTCAGTGTCTTTACAACGGGCATTGCTTTT
CCTTGACATGTTGAGTTCGGTGAAGAATAGCTGTTATAGTTTGATACGAA
GAACGAATGAATGTGAATAAATGAGTTTTTCTTACAACGGTCTGCTTGTT
TTGCACATCCAGTGTGTTCTGTTACAAtcaattaatttttcaatcGCCGG
GAAATTAACATTTTAATTGCTTAGTAATTATACGATATAAATGTGATACG
TTTTCGAAATTGTTTCTGTTAATTATCTTCTATAGACTTGTCTTCTCTCT
TCACCTTTTCATTGTGATGAATGCAAGGTCGTTTTCGCCATGGTGCGTTG
TTTTTTCTTCGGGTGTAGCTTttgactgaaaaatttgaaaattcgtaATG
GAGATCTATGTATGCTATCTGGATAAAAAGTTATAGTCAAAAcagtttca
tcaatttttttcagggTAATGAATGGATCATGTATTAACCACGCTAAAAC
GTTATTTGAAATGCCATTCTTCCATTTCCAGTAAGACAGGAAAGGGTTGT
GATTTTAGGGTAATGGgtccaaaatatattttgtctGGTCGGGGGCTGAA
AGATACATAAGATTCTTTGCTTCAATTATACTACTTGATACAAATGCATA
ACTGATTAATGAGAAATGATACTTCATTGTGTTCTtcattctttcaaatt
ttagccTTTTTTGTTTTACATGTTATAAACATTTGATGTTTTTGTCTGGT
TGCTTTGATGATGATTTCATCCTTTAACAACACTAAAATATACATGCTTT
GAAACGTTCATTGTATGGTAATTGTATCCTTGCTTTAATAATAGTTATGT
TTTTATCTGGAGATACGGTGCTTTTGAATTAAGATTTTTGTCGTTTCGCT
TTGGTGCTTTGTGTAGTTGAGATGCAGACCCTGTCATTGTATTTTGTCAC
TGCGTTGCCTCTAGGGATTTTAGGAAGTCAAAGATAAGTAAGGATGACTT
TATACGTTTTGTTCAAGAAGTGTAAGCAATAATAGAATAAGCTTGCGTGC
AAGTTTATGAATGGTTGCTCCCGAATGGTTACTCGTTGCTCCTTTGGATC
ATGGGATTGGTCATCTTTCCATAAAGTTACCAGCTTCAATATAAAGACAG
CTAATTACGTCTATCGCCATatagaaatcaaaaaatagGAAACTGCATGA
ATCAAATGTTTTCCTTCCCATTTAAAACCTAACTGAATGATGTGAATGGT
GTTGAAGGATTTTCGATTGACCACAGAGCTGAATGGAACATACATCTCCT
CACATTCTTGTGCatctttttgtttcattttgattcATTTCGGGCCCATT
GAAACACTTGTAATTATTTATCAATTGATGAATAAATCATGCAGAGTAGG
AAGAATTTTTGTCAACTATAGAAAGGTTAGTTCAAAAagaaaacaccaaa
atataGATTCTGGAGATTTGTGGCCCTCGTtgtttccatagaaaacaaTG
GTATATATTTGTGTGGTGGGAAGTTTCACTGTATTGGAAGCATTTACTTT
AGAGACCATTGAAGGTTTGACTTCAAAGCCCCAATGTGTCTGAATTGATA
GGCGTTCTCCTTTGCGTTCGAATCGGTAGATaatgtattttgaaatttcg
ctATCAAGTTTTTGGTTGTGAGGATTTTAAGAAAAGAAAGTGAATCTACT
TCCTCCCATTTCTTcgtaaaagaaaatttatttggaCATTTTCTCACATG
GCAGTCTATTCCTCCCAAATAGTCTCCAAGATTGTGAATATTACTCTTCG
TCTAAGGACAATCAAAATCACATACTTAATTGGTTATCAATGGCAACTCT
CGAAAACAGGTCATTATGTCTAATTACTTTGAAAGCAATACTGTATGTAC
ATCGTTTGCTTaaatttggaaaacatttttaggcgaaaattcaaaaagtt
aagaacatccgagggcttaaaaaattttggaagttgttataaaatttttt
ggaggttttatattttattctttGAACCTTGTACCAATTGTGTATTGTAA
GTAGTTGGTGATTGTAATTGTTTCCAGTTTATAAAACAAGACAAGAAAAG
TCTTTGGGTATTCAGTGTACTGTATGTGGTAAATTGGTTTCCAAACTACA
AACTTTGCGCTTCTTCCCACTATCAAACAGGTCCTCGATATTCAAATGCC
AAATTCAGAAAGCCTTTTGAGTGTGAGGAGTGTGCTTTTCTTGGAGCACT
GTTTTTGAGTACCACAAACTTGACACTTCCCTTCAAACAGTTTGATATCT
ATCTGTGTTATGATTTGGATAAAACGTACTTGTGATGAATACACGTGTGT
TTGATGGAACATTTATTCAAAACATTCCCTTCTCATCAATATTTACTTAC
TTTTTTAAGAAGTcttaattctttattttttcatcatcacatatttacat
ttttgatttcatttttttcaacaaattttttccTCCTTTACTTTACAACG
TTTCATGTTCGTCCATTTTCTTTATTGAGTTCTtgatttatcttttcttt
tctttctttgttgttGTGTGTGTGAAGATCTTATGGTTTTCGTCTTCTTT
CTTCCCCTTTTCATCCTTCGACCTCATCGTTAGATATTATGTTTACTTGG
AACAACCAATTTTCCACGTCCTGGGGTTATCATGGCGATTCTTGGTGACG
GTTCTGACCAACTACAGAATAACAGGAAACTATTTGAAATAGAATTTGTA
TAAAACTATACAgagatatttttttcttctcttcttaGTTTAAAATTGAC
GTATTGGTTTTAGCGAGTAAATTCCTTTTGGGGTAAATTTTGGACCCATT
TTCCATATATGCTGGTTGTTTACTGATTTGAATTCCTTTTGCGCATAAAA
GGAGTTCTGGAAACGATCTATTGCAAACacatcaaaattaaagtgaataa
acagtacacgcttttttttataagaatggtgtttttcatttcatcatgga
tattcttaactttttggcgaaaatattcttacgctattcttaggttaaga
tcgaaattggcaatctacaggttaaaatgcattaaaaatggcattcttag
gttcagttgctaaacttcatgatggtgatattcttatcatattcttaatt
tttcggccattttcatcatggacattcttatgaagtttattcttataaaa
aaaaaaagcgtgtatgtggAACATGGTTTTCGTGTACTGTACTTCACACA
TGTAGAATTAGGGCTTTTAGTTCGTTTCATGTCATTTTGGTGTCAAGAAA
TGACGAGCACAAAGTTCGTTCTTTATCATCGCATACAGTAGATCATGTTT
ATTATACAATGGCTCAACATCTTCTCTTGAACGTTCAGTTTTATTAGTTA
TGATAATGTAGATCATAATTGCATCAGTTTTGTTTAATTCCTTTATGTCA
AATAGATTAATGCACTTATGTAGACACACACATCACTTGCTTTGCCTGCC
CAATAGCTCTCTTTCTCTTGTCCACAACAGCTTGTAAAGATAAGTGTATT
ACAAAGTTATAATTAGGAAATTGAagctttttttctcttttcagaacatt
ttttatatacattttgAAGTAATTTAAACAACAGCAGAGGGGTATTATCT
GATTTTTATAGTTCCATTTCTAAAACTGGATGGATAAACTTATGGTAGgg
gagaaaataaaaattaatatcacaaagaaacattttaaagaaagagaaga
tatAGAATAGAGGTTTGGAAAAAGGGTTGACTAGCTGAGAGAAACCTTAA
ACACTGTTTTTATGTCGAAGGgttttttttctatgaaatatTATTAGTAA
GGGtacaaaattgattaaaaaaagaaatgagcttaaaatgttattactag
aagtgaaaaaaaatccaacaagCTGAGAATTGACTGCGAGAGACTGTTGG
TTGGAGGTGGATTCTTTTTAGTAATGATTTATGTCATGCTTAGATAGTTT
ATATCATCTTACAAGTTTGAGTGTGATGGCGATATATAcatttatcggcg
atccaaaaaatatctgcaatctgattggttaaaaagagtacaatatatcN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNgtcaccgataaaccagttatcagacatttgctcgtacaatatgga
aatattttactcgttccgtattttccgtatattttcctcgcctaaaggct
cggataTGACATGACATGCTTAGATAGTTTATATCATTTTACAAGTTTGA
GTGTGATGGCGATATATACATATATTGTAAAAAGACCTAGTGATACatgt
cttaaactcatttattGGCTGATGTTTGGTTTTATGAAGTTtcctttaaa
gaaaatttggGCTTCCCTTATTCGATCATATTAGTAGTATTGATGGTTCA
TTGACGGAAAGAATAATATATCTAGCAATACTCTTGCAATTATACTAGTA
ACAAGGCTAGTATAGCTTAAATTCACTGTAAAGTCACTTTCTCTTTGAGC
AGGTTTAGTACGTCGTTAAAAAATCGATCTAATAGTAGAACGTCCAGTGA
AAGATTTATAAACGTTGTCATCTTACATCACAAGCAAGTGATCAGGGAAT
GAATGACGTGATAACTTGAATTTACATTGCATTATTCAGTTAACTCAATC
GTTGATCGGACTTTTCTTTGAGTGAGAATGTTTTTCGTTCTGAAAGAGTG
ACTCAAAGAAATCGAGTTACGCGAAAATCTAGCTGTAAACTTCCTATCGc
aatcgaatttttttttgaagttacTATGTGTTTATCTTGTTTGCATCTCG
AGTCAAAAGACAACAAACAAAGCCCTCTTTTGACTGTAATCTAAGAATGG
CTAAAAAATGTCCTATTTTCTCCCCAATGTTTATCTTTGACACTTGTATA
GCGAGTACATAACATTTCAGGACTCTCAAAACACACTCTAAAATGATATA
TCCTCCTTCATTTCAAACCTCCTATGAAAATAAATATTGCCACGACCAAG
TTGCTTTCGATATAAGAATCGAAAATGGTTGAAACTATGGTAGTCGATAC
ACCATTTTCAGTATATACTGTATGATCCTTTATAGAAGCTTCTTATTGTT
TGCCAGACAAAATAACAGTACAGCACGGAATGTCAGATTGAAAtattaat
attttttgtaaCAGTACACCATACCACATGAAAtcttatttgaaaacatt
aatcCATGTGTATTTCAAGAGATATTATGAAGTCAGaatgtgtgcttata
aaaaaagttttattttacgTTATGTTGATTTAAGATtgagtttgttgttg
ttttttggtttctaaaaattctcTTACTTCTTTACAAATTTTAATCGATG
CGTTTCTAAGTGGATTTTCTTGTAATTTGTGTCTCTGTGAATGGGTTTGT
AGTATCAATCGCTCTGTGACTGTGTGCTGAGTTCTATGAAAAATCAAGTC
TTTCTTTTGAGGTTCTGAAGTCTCATAAGACAGTTTTTGATTTGGTTTAG
CTGACTTTTCTGAAGTGCTTGATTTTAGGTCtgttttgtgaatattttaa
TTTGNCTGACTTTTCTGAAGTGCTTGATTTTAGGTCTGTTTTGCGAATAT
TTTAATTTAAGTAATTAAACACTCCTCGTTCGGATCTCAACGATCACTAA
ATCTCGATTCATTTCAACTCCAGCAACACTGTCTAACTTCAAGGAACTTA
AACTTTAAATTTGTCATCTTCTATTATCCATAGGAAATAGTAAAATCAAG
TCAATCGATGAATTCGCTTCATTTCTCACCACGTGACTCGGTCACAGTCC
ACTCGCTATCACCCACCGAGCTTTCACGTTATGGCTCCTCTTACCCTCCT
GGTAGAGGACACGTGCATGGACCCCAGACCTCATGCCCCGTACACGGTCA
AGAATCAAGTCATCCCCACGATGAACGAAATGGCCGTCCGCCAAACCTTC
CGTTCGATGCGCCGCACGGCTTCCATGGGTTACACGGGCCGCATCCTCGT
TTTCGTGAAGACATTTACATGAGACGACATTCATTAGATGTAAGTTTTCG
TTGTTTTCCTCACTTTTAGATCAGTCCTTCTTTCTTTTAATATAAACTTG
GACATGTATGATACTATTTTACAAGCCTTCGTATTGAGAAGATTCGATAC
ACAAAGGTTGCCAATATGAATAGATTACTGAAACTGTGATTAGTAAATAA
ACATTGTTTCTTACTACATACTGTGATGCATCTGGCAATCCAGATGCTCC
TTTATCGATCTCAACTGAAtgtataacttttgttttcattcctTTCCAGC
GTAAAGAGCATTTACCGCCCCCACCCCATCACGCCTTAGAAGAAGACTTG
CGAAGAAGAGGAATGGATTTTAGAGGTTTTGCTGGTTTACCGCCCCATCT
CTTGGATGAGCAATACAGGCGTCATTTGTTGAATGGAACGCATGAACACC
CTCCACCCTTCAAAGTAAGTCtaaattactttttctttagaagttttgct
tAACAAAAATGAATGAACTTAATTATATAACTATTTAATAAAACAATcga
aaaagttatatttttccgGTTTTCTTCACTAGGAACCAGGACATGGACAA
GTCTTTGTTCCACCGCATTTCTATTACGGTCGTGAATATCCGCTCCCGGT
TGACCCCTACCATCCGCACGCGTTATCCGCAGCGCCGAGTGAACTTCTTC
ACAGATACGGAGGTGCACCTCCACCGGTCAGTCCCAGGCTACTAGAAGCC
TATCGACGTAATGAGCATGGTGTTTTGAGCTCGCGCGAATTCGAAGCGGC
CGAGCGACGATATGAAGAACGCCGGGAGAGTGCTGACCAAAAAGAAAGTG
TTATTCGACCAGCTTCTATCGATCTCTACCGCAAGAAGAGTGCAGAAAAT
CATATGCACGGTAAGAGAATCCTCTTTTTTTTCGAATGTCTTGTTTAGAT
TTCTATTTTCGTTTTCTCAAGTGCAAGTCAAGATGTACAATTGTTTTCAA
GATGGTTGTGAAAAACCTTTCGAACTATCCAATTGAAACAtggattttta
tgttttcagaTCGTCGTAAACACAGTATTTCACTGGACAAGAAACCAGTC
GTCCACGAAAAAGAGGAACCACCTCGAATGGTATGTTTTTTTAATCTCAC
TTGTATTGGCATCATAAAAGTATAACGAGTCTGGTTGGAAGGTTGTGGTG
ATGATTGTGACTATGATTTCGAGAGCTTTTCACTGCCCAAAATGTGTTTT
TACCAGATCTCTCACCGAGTGTTGGCATATGATGTTTGTGTCCTTTTGCG
AGATTTTGGTGAAGATTTTAAATCATGGCTCGCAGTTGATGATGAGTTCT
CTCAAACAGGAATTGTTAAAAAAGTTCTCGTTTTCTCTATTTTTCGTAGA
AGATGCCCATTTTCAAAGGTTTGGAATGTAACAATAACAACATCAAACCA
CACCCTAAACAAAATGGTAAACCACATGATTTTTATCGCAACCCTTGAGT
CAAATAATATTTTACACAAGATAGCATATATTTAATGTGTATGTGAATTG
GAACACTTTCTTTGTTAGTCTTTGAACGGAGTATTGACAAGATGGGTCAC
TATACCTAACTACTGTATGATATTCTCTTTCCTTCTATATAGCTATTCCT
TGCAAcgattgaaattcttttttcttatcCAAGGTACATCACATCAAGCC
AACTCCATCACCTCGCTTTTAAACAGCAAGCTGCCGAACTCTAAAAGTGA
ATTAGATGCGGCCAGTATTCTTGCCAACATGAATCGAATCAGCCAATCAC
CAGCTTGCTCAGATGAACAGGAGAGTATCACCAGTAGTTCAGCCCCTGAA
GTGATCCCTCCAACGCACATCAAACAACAACCATTGATCAAAGAAGAAGA
CAAAGAAAATGTCGAAATCGAACAACCTGAAGAGGTATAATTTCCTCATG
TCTTCTTATCAGAAGATTTGACATTTAATAAAGAGTCTAATACGGAAGAG
CGTAGAGAAAACTTCATATGCTAATTAAGAGAATCTGGTGGTTGCAAGGC
ACGCTGTAGATACAAAGCCCTTTAAATTTCACATTGCNACGGTAAGAGAA
TCCTCTTTTTTTTCGAATGTCTTGTTTAGATTTCTATTTTCGTTTTCTCA
AGTGCAAGTCAAGATGTACAATTGTTTTCAAGATGGTTGTGAAAAACCTT
TCGAACTATCCAATTGAAACAtggatttttatgttttcagaTCGTCGTAA
ACACAGTATTTCACTGGACAAGAAACCAGTCGTCCACGAAAAAGAGGAAC
CACCTCGAATGGTATGTTTTTTTAATCTCACTTGTATTGGCATCATAAAA
GTATAACGAGTCTGGTTGGAAGGTTGTGGTGATGATTGTGACTATGATTT
CGAGAGCTTTTCACTGCCCAAAATGTGTTTTTACCAGATCTCTCACCGAG
TGTTGGCATATGATGTTTGTGTCCTTTTGCGAGATTTTGGTGAAGATTTT
AAATCATGGCTCGCAGTTGATGATGAGTTCTCTCAAACAGGAATTGTTAA
AAAAGTTCTCGTTTTCTCTATTTTTCGTAGAAGATGCCCATTTTCAAAGG
TTTGGAATGTAACAATAACAACATCAAACCACACCCTAAACAAAATGGTA
AACCACATGATTTTTATCGCAACCCTTGAGTCAAATAATATTTTACACAA
GATAGCATATATTTAATGTGTATGTGAATTGGAACACTTTCTTTGTTAGT
CTTTGAACGGAGTATTGACAAGATGGGTCACTATACCTAACTACTGTATG
ATATTCTCTTTCCTTCTATATAGCTATTCCTTGCAAcgattgaaattctt
ttttcttatcCAAGGTACATCACATCAAGCCAACTCCATCACCTCGCTTT
TAAACAGCAAGCTGCCGAACTCTAAAAGTGAATTAGATGCGGCCAGTATT
CTTGCCAACATGAATCGAATCAGCCAATCACCAGCTTGCTCAGATGAACA
GGAGAGTATCACCAGTAGTTCAGCCCCTGAAGTGATCCCTCCAACGCACA
TCAAACAACAACCATTGATCAAAGAAGAAGACAAAGAAAATGTCGAAATC
GAACAACCTGAAGAGGTATAATTTCCTCATGTCTTCTTATCAGAAGATTT
GACATTTAATAAAGAGTCTAATACGGAAGAGCGTAGAGAAAACTTCATAT
GCTAATTAAGAGAATCTGGTGGTTGCAAGGCACGCTGTAGATACAAAGCC
CTTTAAATTTCACATTGCCATTGCTCTCCtaatcaaaaacttttgtttta
ctTTACAGAAGCTGAATTATTTGTTAAACCTCGGATTGGTCATGCATTCT
CGAAAAAGAAGTAAGTTCTCTCTCCTCTTTTGTTAGATTCGTAGTCGAAC
TGGAATTTATTAGCGAATATTAACTAAGGTGGTTTCTTCTTACTTTCTTC
ATTTCAttaattttcatatttatttAGTTTTAGAGGAAGAATTTGAGAGA
AAACGTTGGGATCGCAAATTTCGAAAATATCGTGGACGACCGAAGAAAAG
ATCAAAAAGAGAGGTGTGTTGTCTTTGTTGGTATTTTTAGGGATTTTGAC
AGCTCTTTTGAAACGTTGCATAACACAAATTCAGAGTGAAAAGAACTAGC
GATAGATCCATTTCAATCTCATTTTTCCTAAATCTGTAGTTATGACTTTG
AAATCCATTTAAACaatttaatatttatgttttctAGAACACCGAAGAAG
GTAGTGTTAATGGTGACTTGAGACCTGGATCTGATCTTGATTTTTATAAC
GGGCCCATGACCAGGCACAAGCAACAACTCTTACAAGAACAAGAGAACTT
ACTGGAACAAATTCAAAAACAGAACAGTACAGAGAACAATTCTGAGAACG
TTCAGAGTCCAGGGGAAAACAGTAACCCTGAGACAAATAAAGATAATCAA
AGACCCGCATCAAGAAGTAGCGGCAAGAGCAAAAAATCTCCGCGAAACTC
TCCCCGTAAAGACTCGATATCGAAAAGCTCTTCTAATGGGGACGCGGCAG
TTGAAAATAACGACAACCAAACGACAAATGTTCCGACACCTACGGTTTTC
ATTAAATCGGAAGAAAACTTATCAACATCGTCACGAAAATCAACTCCGAC
TCCGACCAACCATCATGCGCCCAAAGAGTCGTCGGTAATTGGCACCCACG
ACAATTCTCACCGCCAAGACGAACGACGTCAAACAAACGACCGCTCTGAT
CGCCTCATGACACTGATCAAAGATAAGGTTCACCCTGTACCGGCCCCTTC
GCCTTCATCGGCCTCGTCAAGCCACCACCGGCATCATCCACACCATCATC
TGATGGATAAAAATCATCTTCTTCATCGACAGCCCTCTCCACATCCCTCG
TCGTCCTCTTCACATGAACATTTAAAAAGGCATTCTTCTANGGCGGAACA
TGCAAGTGAGCATCGAAGGTGTCCATAAAGCACTACGTTCCATGTCTGAT
TTATAGGATTGACATTCGCTTATCTTTTTCAAGTTTGTCCTTTTAGTTTA
GTCTTTAGTCAAgttttcaatctttttattGCGTGTAAAATCTGGGGAAA
NCCACCGGCATCATCCACACCATCATCTGATGGATAAAAATCATCTTCTT
CATCGACAGCCCTCTCCACATCCCTCGTCGTCCTCTTCACATGAACATTT
AAAAAGGCATTCTTCTACATCAGCCAATAATAGCGCGTTTAACGATCACG
TGCCACGTCCTTCGTCCAATCATCACGCTTCATATGCTGAACACGTGGAG
GAGATGAGGAAGTTGGACAGCAGTTTATTTGGTAGACACATGGTAAGCCT
ATTCAATTCATAAATTCTAGTAACTGACGAGAGCCTTTTTCTGGTCAATC
TGCTAGGATTGTTTTTCACTAAGTAAAGTTTTCGTCGAGCGGTCAGTAGT
TGAATGAGTGAAATGACTCATGAATCATTGGTGATACGGTTAAAAATAAG
GGTTTCTCTCACgtgaatattttttcattttattaggaACCGACACAAGA
CCATTTCGCTCGTTGGCCAGGAGTCAATTACATTCAACATGCATATACTT
CGTATTTAAAAGGTAAAAGAACGTCGTTTTCTCACAAAAAAAATGGTTTG
GTTGTGCTCGGGCGCCGCGGGAGAGACCTCTTGAATATAAATCTTCATTA
TTAGACAAGGtcttattgggctcttccag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006961XLOC_006961Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012376-exon-sc0000144-1491911889:138641..138763TCONS_00012376-exon-sc0000144-1491911889:138641..138763Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:138641..138763TCONS_00012376-exon-sc0000144-1510915933:138641..138763Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:138641..138763TCONS_00012376-exon-sc0000144-1575043694:138641..138763Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:139112..139171TCONS_00012376-exon-sc0000144-1491911889:139112..139171Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:139112..139171TCONS_00012376-exon-sc0000144-1510915933:139112..139171Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:139112..139171TCONS_00012376-exon-sc0000144-1575043694:139112..139171Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:149174..149479TCONS_00012376-exon-sc0000144-1491911889:149174..149479Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:149174..149479TCONS_00012376-exon-sc0000144-1510915933:149174..149479Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:149174..149479TCONS_00012376-exon-sc0000144-1575043694:149174..149479Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:149740..149904TCONS_00012376-exon-sc0000144-1491911889:149740..149904Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:149740..149904TCONS_00012376-exon-sc0000144-1510915933:149740..149904Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:149740..149904TCONS_00012376-exon-sc0000144-1575043694:149740..149904Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:150023..150350TCONS_00012376-exon-sc0000144-1491911889:150023..150350Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:150023..150350TCONS_00012376-exon-sc0000144-1510915933:150023..150350Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:150023..150350TCONS_00012376-exon-sc0000144-1575043694:150023..150350Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:150500..150570TCONS_00012376-exon-sc0000144-1491911889:150500..150570Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:150500..150570TCONS_00012376-exon-sc0000144-1510915933:150500..150570Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:150500..150570TCONS_00012376-exon-sc0000144-1575043694:150500..150570Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:152021..152087TCONS_00012376-exon-sc0000144-1491911889:152021..152087Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:152021..152087TCONS_00012376-exon-sc0000144-1510915933:152021..152087Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:152021..152087TCONS_00012376-exon-sc0000144-1575043694:152021..152087Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:152305..152555TCONS_00012376-exon-sc0000144-1491911889:152305..152555Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:152305..152555TCONS_00012376-exon-sc0000144-1510915933:152305..152555Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:152305..152555TCONS_00012376-exon-sc0000144-1575043694:152305..152555Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:152749..152800TCONS_00012376-exon-sc0000144-1491911889:152749..152800Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:152749..152800TCONS_00012376-exon-sc0000144-1510915933:152749..152800Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:152749..152800TCONS_00012376-exon-sc0000144-1575043694:152749..152800Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:152918..153003TCONS_00012376-exon-sc0000144-1491911889:152918..153003Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:152918..153003TCONS_00012376-exon-sc0000144-1510915933:152918..153003Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:152918..153003TCONS_00012376-exon-sc0000144-1575043694:152918..153003Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:153178..153832TCONS_00012376-exon-sc0000144-1491911889:153178..153832Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:153178..153832TCONS_00012376-exon-sc0000144-1510915933:153178..153832Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:153178..153832TCONS_00012376-exon-sc0000144-1575043694:153178..153832Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:154098..154282TCONS_00012376-exon-sc0000144-1491911889:154098..154282Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:154098..154282TCONS_00012376-exon-sc0000144-1510915933:154098..154282Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:154098..154282TCONS_00012376-exon-sc0000144-1575043694:154098..154282Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1491911889:154477..154669TCONS_00012376-exon-sc0000144-1491911889:154477..154669Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1510915933:154477..154669TCONS_00012376-exon-sc0000144-1510915933:154477..154669Clytia hemisphaericaexon
TCONS_00012376-exon-sc0000144-1575043694:154477..154669TCONS_00012376-exon-sc0000144-1575043694:154477..154669Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:138641..154669 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.103828	0.00328072	0.17959	0.00549521	1.07355e-05	0	0	0	0	0	0.105095	0	0.00168627	0	7.0028e-08	1.14111e-09	0.428847	0.000134602	1.04668e-05	0	0	0.0280158	1.19533e-06	0.000761476	0.00304469	2.17168e-09	3.22998e-06
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012376 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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