TCONS_00012206 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012206
Unique NameTCONS_00012206
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3239

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012206 ID=TCONS_00012206|Name=TCONS_00012206|organism=Clytia hemisphaerica|type=transcript|length=3239bp
gattttttttttgtctgtcATTTTGATGAAAGAAGTATTTTTGATGAATA
TTGACACCAATGAAAAAACCTTAGTTCATatgatcaaaataaattttgct
tTATTGTTTGTCAAAACGTTTTCACAGTTGAAAGAGAAGGTGCTGACATT
TGAAAGCTTGATGTTTGATGGGTTGAGATGACAGCAGCACAATCTTCACC
AGTCAAATATTTCACACAAGAACACAAGAATCGTCATAATGTTGATATTC
TCGAAGAAAAATCTCAGCAATGCCTCCTCAACGTTTTTCACAAACATTTT
CCACGCAATCCAGTTGATTTATACAATGCTTTGTTACTACATAAAAGGAA
ATTGAAACAACTTTTGAATCAACGGATCTTGAAACAAGATCAGTACGATG
TGATTTATCCTGCATGTCAGAGGACTGACTCCTcactttttgacgtcact
ttgaCGTTCTTTATGATCCGTACTTTATGTGGATATCAAAAACCACGGAC
AGGTTGGGATTCGGAACCAGACCCTACCGATACTTCAGACATCGCATATT
GTATCATTCTAAAGATTGAACGCAACCAACTTAACCATAAAGCAAATCGA
CAGATTACCAAAGCAGAATATAAGAGAATCTACAATCGGATGAGTAAACC
TTTAATCGCTTTAGGATGTCCTCCACAAGATCTCAAGCCTCTGTCACCAA
CATTTATTTATCAGCTTCCAATCGAAAACCCAAACTTCGTTGGTCGTGAA
AATGAATTGAACAAAATTCACCAATCTCTCGTTACCGGAAATAAACTAGC
CACGGTTATTTCAGGGATTCCAGGTCTCGGAAAATCAGAATTAGCAAGGA
GATATGTCACTGATTATGCTGCCAGATATAATAACATTTTGTGGATAAAT
GCCGAAACTATTGAGACAACTTACACCAATATAGCTCAGATTCTCAGTTT
CCCAGGACAATCGAATATCAAGGATATTTCACACATGCTTCATGACTATT
TCAAAAACGAGGAGACACTTTTTGTCTTTGATAACTGCACTGATATCAAC
CAGTTATCAGATGTTTTAAAACTTGGTCAAAAAACCATCATCACCACACA
GCTTGGTAATTGGACCAACAATTACGAACATTTAAAAATGGAAACATGGC
CTGAACAAACTGCTTACAAATTCGTCGAGAACAATCTGAAGGATGAGAAA
CATTTATTTAAAGATTTGATTGAAGAATTAGATTTCCATCCATTAGCTAT
TAGTCATGCAGTAGCGTACGTCAAACAATCACAAACCTCTTTGAAAGACT
ACCTCCAGCTTCTTCGAGATTACAAGCTCGATACTTTATCGCAAAAAGCT
GTCACTCATTATGGAGTTCGATCGTCCGTCTTTTCATCTTTTCAAATCAC
TATCAAAAGAATCGAACAATCTAACGACCAATCGATGATGTCTTTCCTAT
ATTTATTCGGTATACTCGATGGTAGTTTTATCGACGAACGTTTCCTTGAA
CGTTGCTTTGAGAACAAACTTGAATATACGAAAGCCAAAAAACTTTTGTT
AGATTATTCCATGATCAAATGCAATCAAAGGTTTCAAGAATTGACGCATC
TAGCACCCGAAAATTTTTGGACGGTGCATTCCCTTTATCAAATATCAATC
CAACATTATCTTGCTGAAAAGAACATAGAGTTTGAAGCGATCAAAAAGTT
TTATGAAACGATTGATTGCATTTATGACGAAGATAGCAATAAACTCGCAA
TTCTTTGGACTCATCACCTCTATCATCTTTGGAAGGAACCGAAATATAAA
ACAATTTTCATCGATATCATTGATTGCGGAATTTGGGTTATTTACTTGGA
CCTCGATAGAACCGGATACGATAATTTTAGCAAACAGATCGTTAAAGAAA
GTTATGAGGTACGATCACACAACAAAACTGACATCACTGTCTACTGGATA
AAACATTGTATGATTGGTCGTGTGactaaagaaaatttgagaaaactgTT
GAAGGAAGTGAAGACGAATGTTGTAGAGGAATCTCCTGAGAAAGAATTAC
TCATCCAGAAAATTCAGAAGGATTTAGAAGACAATGATTACAATGATTAC
AGTGAAATTACAGCCATCTTAATTGATGGCGATTTTGAAGGGCATCAAAG
TCAAGAAACGTTGAATTTTGAAGAAACATTCCCACTTGCTCTTTCTTATA
AGGAACTTGGAAACTACAATGCTGGATTGCAGTTGATAAAGAAATACTCA
GACTTTAAATATGTATGGTATCCTTGTAAAACGTTGATTGCGTGTTTATT
GATACTGAATGGAATGGTGGAGGAAGGTTTAGAGATTTTTGACTCTTTGA
CTTTCGATGCTGATCAAGAATCATCAGAAGAAAGAATTTCATTATCTGAA
GTCGGTCGTGCTCTTTTCGATACAGGAGCATACGAAAAATGTGGAGAGAT
TTACCAGAGATTCCATCAATTTGCACTTTGGTTACCTTTCTTTTCCTATC
TCGACagtttttgtaaaatgttgattctgaaaaaagttgaaactaTTGAT
TTCATTAAAGGGcaattattgtttttcattgaTCCTAGGTATAAATTAGA
AAATTCTAATCCAACGAGAGTGGAATTCCGATGCAGAATACTTTATATTT
GTTGTTTCATTCGTgagaatgatttcaaagaagcctcaaaacatttgaaa
aagctCTTCAAAAAGCTAAAGAGACCTAATCATCCAAATGATTTAAGAGA
GGCTTTATTCATGGCGAAGCATTTGAAATTACGTCAAGAACACGAACAAG
CTTTGACTATACTTTTTATCgtgaaaaaacttcaaaagaaaataaatgct
GAAACTTTGAAATTAAATGGGGTTGAGATCGATATTGATCGAGATATCGA
GTTTTGTATAAATCGATTGGGTGGACTTCCCGAGCATCTTCGAGAAAAAG
AAACACGtgattgtattgtattgtaaatTTTACTTTCGTAACATTAGTGT
ACGTTGTAATGTAAGAGGGTAAAcagaaatatttgaattttaacACAGGA
TATTACGATAAGGACCTACTTTATGCCATAGAATGAATGTCTCCAGGTAg
tttatttttaacaaaatgaagcattttaccttaagtggattaattttggc
gtggatttaatttggggatggatcaatttcgtaaaatttaggGGGAATTT
AATTTGTCGAAAACATTACGCATTCTACTTTATCCTAGC
Run BLAST on NCBI

protein sequence of TCONS_00012206-protein

>TCONS_00012206-protein ID=TCONS_00012206-protein|Name=TCONS_00012206-protein|organism=Clytia hemisphaerica|type=polypeptide|length=932bp
MTAAQSSPVKYFTQEHKNRHNVDILEEKSQQCLLNVFHKHFPRNPVDLYN
ALLLHKRKLKQLLNQRILKQDQYDVIYPACQRTDSSLFDVTLTFFMIRTL
CGYQKPRTGWDSEPDPTDTSDIAYCIILKIERNQLNHKANRQITKAEYKR
IYNRMSKPLIALGCPPQDLKPLSPTFIYQLPIENPNFVGRENELNKIHQS
LVTGNKLATVISGIPGLGKSELARRYVTDYAARYNNILWINAETIETTYT
NIAQILSFPGQSNIKDISHMLHDYFKNEETLFVFDNCTDINQLSDVLKLG
QKTIITTQLGNWTNNYEHLKMETWPEQTAYKFVENNLKDEKHLFKDLIEE
LDFHPLAISHAVAYVKQSQTSLKDYLQLLRDYKLDTLSQKAVTHYGVRSS
VFSSFQITIKRIEQSNDQSMMSFLYLFGILDGSFIDERFLERCFENKLEY
TKAKKLLLDYSMIKCNQRFQELTHLAPENFWTVHSLYQISIQHYLAEKNI
EFEAIKKFYETIDCIYDEDSNKLAILWTHHLYHLWKEPKYKTIFIDIIDC
GIWVIYLDLDRTGYDNFSKQIVKESYEVRSHNKTDITVYWIKHCMIGRVT
KENLRKLLKEVKTNVVEESPEKELLIQKIQKDLEDNDYNDYSEITAILID
GDFEGHQSQETLNFEETFPLALSYKELGNYNAGLQLIKKYSDFKYVWYPC
KTLIACLLILNGMVEEGLEIFDSLTFDADQESSEERISLSEVGRALFDTG
AYEKCGEIYQRFHQFALWLPFFSYLDSFCKMLILKKVETIDFIKGQLLFF
IDPRYKLENSNPTRVEFRCRILYICCFIRENDFKEASKHLKKLFKKLKRP
NHPNDLREALFMAKHLKLRQEHEQALTILFIVKKLQKKINAETLKLNGVE
IDIDRDIEFCINRLGGLPEHLREKETRDCIVL
Run BLAST on NCBI

transcript from alignment at sc0000141:289553..299155-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012206 ID=TCONS_00012206|Name=TCONS_00012206|organism=Clytia hemisphaerica|type=transcript|length=9603bp|location=Sequence derived from alignment at sc0000141:289553..299155- (Clytia hemisphaerica)
GATTTTTTTTTTGTCTGTCATTTTGATGAAAGAAGTATTTTTGATGAATA TTGACACCAATGAAAAAACCTTAGTTCATATGATCAAAATAAATTTTGCT TTATTGTTTGTCAAAACGTTTTCACAGTTGAAAGAGAAGGTGCTGACATT TGAAAGCTTGATGTTTGATGGGTTGAGATGACAGCAGCACAATCTTCACC AGTCAAATATTTCACACAAGAACACAAGAATCGTCATAATGTTGATATTC TCGAAGAAAAATCTCAGCAATGCCTCCTCAACGTTTTTCACAAACATTTT CCACGCAATCCAGTTGATTTATACAATGCTTTGTTACTACATAAAAGGAA ATTGAAACAACTTTTGAATCAACGGATCTTGAAACAAGATCAGTACGATG TGATTTATCCTGCATGTCAGAGGACTGACTCCTCACTTTTTGACGTCACT TTGACGTTCTTTATGATCCGTACTTTATGTGGATATCAAAAACCACGGAC AGGTTGGGATTCGGAACCAGACCCTACCGATACTTCAGACATCGCATATT GTATCATTCTAAAGATTGAACGCAACCAACTTAACCATAAAGCAAATCGA CAGATTACCAAAGCAGAATATAAGAGAATCTACAATCGGATGAGTAAACC TTTAATCGCTTTAGGATGTCCTCCACAAGATCTCAAGCCTCTGTCACCAA CATTTATTTATCAGCTTCCAATCGAAAACCCAAACTTCGTTGGTCGTGAA AATGAATTGAACAAAATTCACCAATCTCTCGTTACCGGAAATAAACTAGC CACGGTTATTTCAGGGATTCCAGGTCTCGGAAAATCAGAATTAGCAAGGA GATATGTCACTGATTATGCTGCCAGATATAATAACATTTTGTGGATAAAT GCCGAAACTATTGAGACAACTTACACCAATATAGCTCAGATTCTCAGTTT CCCAGGACAATCGAATATCAAGGATATTTCACACATGCTTCATGACTATT TCAAAAACGAGGAGACACTTTTTGTCTTTGATAACTGCACTGATATCAAC CAGTTATCAGATGTTTTAAAACTTGGTCAAAAAACCATCATCACCACACA GCTTGGTAATTGGACCAACAATTACGAACATTTAAAAATGGAAACATGGC CTGAACAAACTGCTTACAAATTCGTCGAGAACAATCTGAAGGATGAGAAA CATTTATTTAAAGATTTGATTGAAGAATTAGATTTCCATCCATTAGCTAT TAGTCATGCAGTAGCGTACGTCAAACAATCACAAACCTCTTTGAAAGACT ACCTCCAGCTTCTTCGAGATTACAAGCTCGATACTTTATCGCAAAAAGCT GTCACTCATTATGGAGTTCGATCGTCCGTCTTTTCATCTTTTCAAATCAC TATCAAAAGAATCGAACAATCTAACGACCAATCGATGATGTCTTTCCTAT ATTTATTCGGTATACTCGATGGTAGTTTTATCGACGAACGTTTCCTTGAA CGTTGCTTTGAGAACAAACTTGAATATACGAAAGCCAAAAAACTTTTGTT AGATTATTCCATGATCAAATGCAATCAAAGGTTTCAAGAATTGACGCATC TAGCACCCGAAAATTTTTGGACGGTGCATTCCCTTTATCAAATATCAATN ATTTTGGACGGTGCATTCCCTTTATCAAACATCAATCCAACATTATCTTG CTGAAAAGAACATAGAGTTTGAAGCGATCAAAAAGTTTTATGAAACGATT GATTGCATTTATGACGAAGATAGCAATAAACTCGCAATTCTTTGGACTCA TCACCTCTATCATCTTTGGAAGGAACCGAAATATAAAACAATTTTCATCG ATATCATTGATTGCGGAATTTGGGTTATTTACTTGGACCTCGATAGAACC GGATACGATAATTTTAGCAAACAGATCGTTAAAGAAAGTTATGAGGTACG ATCACACAACAAAACTGACATCACTGTCTACTGGATAAAACATTGTATGA TTGGTCGTGTGACTAAAGAAAATTTGAGAAAACTGTTGAAGGAAGTGAAG ACGAATGTTGTAGAGGAATCTCCTGAGAAAGAATTACTCATCCAGAAAAT TCAGAAGGATTTAGAAGACAATGATTACAATGATTACAGTGAAATTACAG CCATCTTAATTGATGGCGATTTTGAAGGGCATCAAAGTCAAGAAACGTTG AATTTTGAAGAAACATTCCCACTTGCTCTTTCTTATAAGGAACTTGGAAA CTACAATGCTGGATTGCAGTTGATAAAGAAATACTCAGACTTTAAATATG TATGGTATCCTTGTAAAACGTTGATTGCGTGTTTATTGATACTGAATGGA ATGGTGGAGGAAGGTTTAGAGATTTTTGACTCTTTGACTTTCGATGCTGA TCAAGAATCATCAGAAGAAAGAATTTCATTATCTGAAGTCGGTCGTGCTC TTTTCGATACAGGAGCATACGAAAAATGTGGAGAGATTTACCAGAGATTC CATCAATTTGCACTTTGGTTACCTTTCTTTTCCTATCTCGACAGTTTTTG TAAAATGTTGATTCTGAAAAAAGTTGAAACTATTGATTTCATTAAAGGGC AATTATTGTTTTTCATTGATCCTAGGTATAAATTAGAAAATTCTAATCCA ACGAGAGTGGAATTCCGATGCAGAATACTTTATATTTGTTGTTTCATTCG TGAGAATGATTTCAAAGAAGCCTCAAAACATTTGAAAAAGCTCTTCAAAA AGCTAAAGAGACCTAATCATCCAAATGATTTAAGAGAGGCTTTATTCATG GCGAAGCATTTGAAATTACGTCAAGAACACGAACAAGCTTTGACTATACT TTTTATCGTGAAAAAACTTCAAAAGAAAATAAATGCTGAAACTTTGAAAT TAAATGGGGTTGAGATCGATATTGATCGAGATATCGAGTTTTGTATAAAT CGATTGGGTGGACTTCCCGAGCATCTTCGAGAAAAAGAAACACGTGATTG TATTGTATTGTAAATTTTACTTTCGTAACATTAGTGGACTTGGTGAATTA AGGGTTAGACAGAAATATTTTAATTTTAACACAGGACATTACAATGCGGA TTTAATTTGGCGATGAATCAATTTCGTAAAATTTAGCGGGGATTTAATTT GGCGAGTGATCAGTTTTTGAAATTTTTGTGGGGAGTTGATTTGGCGAATT TTGTTAAAATTCACCATTCACACCATACACTTTCTGAGAAAAGTACAAAA TATTATCACTTCTAAATACTTTACGCATTCTACTTTATCCTAGCTTGTTC TTATACACTTATTTGTAATTTATTAACTTTATCTAACTTTTATTATTAAG AATTCAAAAAGAAATTGTTGGGTTCATTTTTCAACTGACAAGATTTACCT CTTTCCGATATTGATGATTTCTCACTAGCCACTTGTATGTGTGTGTCTTT TATGTGACAGAGACGGTTAGCTTCTGATTTGTGTAGATCCTGATTGTCTG AGAATGATAGTAATTCAACACTTTTCCATCCGCGATTGCCAAATCGTTTA AGTCAGTCCACCGCCCTCAAGAGTATAATTTATCGGCCCTTTTTACCCAG GCCCTTATTGGTGTTATTTTCGAAAATTTTCCAACCCCCCCGACCTTATT AGGACCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTCCGTTTATTT GGAACCTAAGAGTAATAGGGGATTGTGTTTAAATGGATCGGTAAAGCAAG GCCGGTGTAAAAAGGGCCAGTAAGGTACATAAACTCCCTATTTAAAACTC CGAGGACGGCAGATTGAACCAGCATAGAATTATCTTTAAACTGTAATAAA TTGAATGAAAACTCTATTCATGGCTTATACTACGCTACGGCATATCTTCC TTCGTTTCGAGCGTAAAACTCCTACTCTTCGGGCTATGAGCACTGCTCTT GTTTTGAATATTGAAATTCTCCAGATAAATCGCATGCGCACTNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTATTATGTTTAAACCTATT AATAAGCAATTCCCGGTGGGGGTCACTAGTGACCGCCTATAGCAGTGCCT ATAGACCAAGAGTAAGGCCTAAAAGCCTGGATCTGTCTATTGTGTAGACT AGGCTTATACTACGTCTATCATATTTTACAAGTTTTAAGATGCATGGAAA TGAAGCCCTCTTATTTGGGAGTTTCTAAACATCGACCAGAAATGGCGACC ACGACCAGCGGCCACAACCGGCGACCAGATAAATTTGGATTATCGAGTTC ATCTGCTCTCTCCACCATAGAGAATGTTTAAATTAAGTCCTCAGAATACT AAAAAGTGACTTTTGAAGTAACCAGTCGTTTTCTTGACATCTTGACAAAG TGATACAATTTGACAAAAAATATTGACAGGAACATTAAGTATGATGTTTG TAAGCTTTGTTGCACCGACTATTTTATTATGCTAAATGAGATGCCTTTAG TATGAATATATAGAACTTGTCAGTAGGAAAAAATCGGGAAGGCCAGTTTT AGAGACATGCTGATAATACAAAAGGATGGAAATTGAAACCATAATCAAGC TCCAAGAGCGTCGAAATGGTTGTTTTAAGTATTTGGTACGTGGCTTTGAA TAGATGAGACAGGATTAGAGCTTACTCTTCAATATGATATATATGCAAAT GATTAGGAGAGACTTGATAACAAATCCGAATTTTGATCAAGTAAGTTTAT CATGAAAACAGACAAGTTATTATCGTGACATTGATGATAGCATATTTTCA GGTGAAAAATGACGCCTAAAATATGCTAATTATTTGATCAGGTACTTTAG CAAAACTGTAAATATGATATCGAAACATTTTTTTCTGACCAGTTAAGCTT CATGCTTTTCAGGCATTCAAACATTTTTTTTGACCTGTTAACTATCATGA TAAATATTAGTGCGATTTTGTAGCAGAAATAAGCCACGGGTACTTTATTG AATTTGGACGACAATGATATTGCGAAATACGACAGAAAGTTGCCAAGTTT AAGGATTTGGAATGTAAAAATCATCGATCATCAAAAAATGTAATTTGATT CGCCCTTTAAAAGACGACAATGATATTGCAAAATACAACAGAGAGTTGCC AAGTTTAAGGATTTGAGAAGTAAACATCATCAATCATCAAAAAAACATAA AAAGAGGTCACAAAGCAAAATTAGATCGAAAGGGTTTCGCTCCACTATTT TCATTGGAATTGAAATGCTCCGTTTCGTTGAAAGACTTTCCAAGGGAGGG GAAGGTTCAAAGTTTATGCCAAAAAGTGTTTTCTCCATCTTTGTTCCCTA TAATATGAGAAGGAAAAAAGGTCTAAAGTTTTCGAGCAAAAGCATGACTA AATTAAGGAACAATACTATTTTCCCCGGCCATTTACTAGTCAAATCCTTT CAAAAAAGTTTCCAAAAGGCGGTCAATCAGCAGAGCCTCCCATTAGCGGA CAAAGTTTTTGCACTAAATGGCCAAAAACCGAGTTTTTACTCTCTAATTA GCAGTTATCAACGGTCAAACTAGTGAAACTGGTCAAAGACTTTAAAAAAT TAGACAGGATTGATTTCTCAAAACTATTTATTTCACTTCAAAGTTACGTT GAAGGAGTTGCTTAAAGACGTTTGGAGCACTTCCTTTCATCCAGTCGGTG AATTTGCTTACGTCATAGAATTTACAGGGACCTCAAGACTACTATGACTC ATTAATTCTAAATCGTTGCATTTGAATAATCATCATCTTGTCCTTTCAAG TGTCTCTAGAAAAGCATTTCGGTCCAAAATTTTATTTACTGAACCCCTGT ACCTTATACTGAAATTAGAGCACAAAATCAAAAAGTTTCTAAAAGGCGGA CACTTCTAATAAGCGGACAGTAACCTTATTTCCCGATGGTGTCCACTAAT TGGAGGTTAAACTGTATTTAAGTTATTAGTTTTGACTTTTAGTAAGGAAA CGTTACAATTAAAACGAAAATGAAATGAAAACTTAAGTTTCTGTGAACCG AAAGGACATCAAATTCAACCATTTACAATTAAGCCGTTTCAGGCTAAACA ATGTTTATAAAATGTTCTTAAAGAAAAAGAGTGTGTAATATTTTGTTGTG ATGTGTTATTTAATTGAACTTTGAACAGATCTGATTACAAAAACAAACAC AATGACATAAGATAAATATTGGTATCATCTAACAGTGACATTTTGAAGTT AGTGATAGAGAAAATTTTTCATGAAGTAGCGAACGTTAGGAAATGGCAAC AGCCGCATCAGGAACACAAACTTCACCAGTCAAATATTTCACACAAGAAC ACAAGAATCGTCATAATGTTGATATTCTCGAAGAAAAATCTCAACAATAC CTCCTCGATGTTTTTCACAAACATTTTCCACGCAATCCAGTTGATTTATA CAATGCTTTGTTACCACACCAAAGGAAATTGAAACAACTTCTTAATCAAC GGATTTTGAAACAAGATCAATACGATTTGATTTATACAGCATGTCAGAGA ACCGACTCCTCACTTTTCGACGTCACTTTAACGTTCTTTATGATCCGTAC TTTATGCGGATATCAAAAACCACGGACAGGTTGGGATGCGGAACCAGACC CTACCGATACTTCAGACATCGCATATTGTATCATTCTAAAGATTGAACGC AACCAACTTAACCATAAAGCAAACCGACAGATTACCAAAGCAGAATATAA GAGAATCTACAATCGTATGAGTAAACCTTTAATCGCCCTAGGATGTCCTC CACAAGATTTGAAGCCTCTGTCACCAACTTTTATTTATCAGCTTCCAATC GAAAACCCAAACTTCGTTGGTCGTGAAAATGAATTGAACACAATTCACCA ATCTCTCGTTACCGGAAATAAACTAGCCACGGTTATTTCAGGGATTCCAG GTCTCGGAAAATCAGAATTAGCAAGGAAGTATATCACTGATTATGCTGCC AGATATAATACCATTTTGTGGGTTAATGCTGAATCTATTGACACAACTTA CACCAATATAGCTCAAATTCTCGGTTTCCCAGGAAAATCGAATACCAAGG ATATTTCACACATGCTTCATGACTATTTCAAAAACGAGGAGACACTTTTT GTCTTTGATAACTGCACTGATATCAACCAGTTATCAGATGTTTTACAACT TGGTCAAAAAACCATCATCACCACACAGCTTGGTAATTGGACCAACAATT ACGAACATTTAAAAATGGAAACATGGCCTGAACAAACTGCTTACAAATTC GTCGAGAACAATCTGAAGGATGAGAAACATTTATTTAAAGATTTGATTGA AGAATTAGATTTCCATCCATTAGCTATTAGTCATGTAGTAGCGTACGTCA AACAATCACAAACCTCTTTGAAAGACTACCTCCAGCTTCTTCAAGATTAC AAGCTCGATACTTTATCACAACAAGCTGTCACCCATTATGGAGTTCGATC GTCCGTTTTTTCATCTTTTCAAATCACCATCAAAAGAATCGAACAATCTA ACGACCATTCGATAATGTCTTTCCTATATTTAATCGGATTATTTGATGGT AGTTTTATCGACGAACTTTTCCTTGAACATTGCTTTGAGAACAAACTTGA ATATACGAAAGCCAAAAAACTTTTGTTAGATTATTCCATGATCAAATGCA ATCAAAGGTTTCAAGAATTGACGCATGCAGCACCTGAAAAATTTTGGACG GTGCATTCCCTTTACCAAAAATCAATCCAACATTATCTTTTCGAAAAGAA CATGGAATTTGAAGCGATCAAAAAGTTTTATGAAACGATTGTTGATTGCA TTGATGACGAAGATAGCAATAAGCTCGCAGTTCTTTGGGCTCCTCACCTC TATCATCTTTGGAAGGAACCAAAATATAAAACAATTTTCATCGATATCAT TGATAACAGAATTCGGGATATTTACGTGTACCTCAGTAGAACAGGATACG GAAATTTAAGGGAACACCTCGTTAAAGAAAGTTATGAGGTACGATCACAC CACAAAACTGACATCACTGTCTACTGGATAAAATATTGTATGGATGATCG TCTGAAAAAACTGTTGAAGGAAGTAAAGACGAATGTTGTAGAGGAATCTC CTGAAAAAGAAAAACTAATCCAGAATATTCAGGAAGATTTAGAAGGTATT GATTACCGTTACTCTGCAGCTATCCTTTTTGATGGTGATTTTGAAGAGCA TCAAAGTCGATTACAATCGCAACAAACGTTGAATTTTGATGAAACATTCA AGCTTGCTCTTTCTTATAAAGAACTCGGAAACTACGATGCTGGATTACAG TTGATAAAGAAATATTCAGACTTGAAATATATAACGTATACTTGTAAAAC GTTGATTGCGTGTTTATTGATACTGAATGGAATGAGGGAGAAAGGTTTAA AGATTTTCAACGCTTTGACTGATCAAGAATCATATGAAGAAGACATCACT TTATCTGAAGTCGGTCGTGCTCTTTTCGATACAGGAGCATACGAAGAATG TGGAGAGATTTACCAGAGATTCCGTCAATCTGCACCAGGGACACCTTACT TTACATATCTCGACAGTTTTTGTAAAATGTTGATTCTGAACGAAGTTGAA ACTATTGATTTCGTTAAAGAGCGATTCTTGCATTCTATTGGTCCAAGTAT AAATTATCTGAGCAACCATCTTAATCCAACGAGAACGAAATTCCGAAGCA GAATACTTTATATTTGTTGTTTCATTCGTGAAAATGATTTCAAAGAAGCC TCAAAACATTCGAAAAAGCTCTTCAAAAAGCTAAAGAGACAGTATCATCC AAATGATTTAAGAGAGGCATTATTCATGGTGAAGCATTTGAAATTACGTC AAGAACATGAACAAGCTTTGACTATTCTTTTTGTCGTAAAAAAAATTCAA AAGAAAATGAATGCTGAAACATTGAAATTAAATGGGGTTGAGATCGATAT TGATCGAGATATCGAGTTTTGTATAAATCGATTGGGTGGACTTCCCGAGC ATCTTCGAGAAAAAGAAAAACGTGATTGTATTGTATTGTAAATTTCCTTT TGTAACATTAGTGTACGTTGTAATGTAAGAGGGTAAACAGAAATATTTGA ATTTTAACACAGGATATTACGATAAGGACCTACTTTATGCCATAGAATGA ATGTCTCCAGGTAGTTTATTTTTAACAAAATGAAGCATTTTACCTTAAGT GGATTAATTTTGGCGTGGATTTAATTTGGGGATGGATCAATTTCGTAAAA TTTAGGGGGAATTTAATTTGTCGAAAACATTACGCATTCTACTTTATCCT AGC

Coding sequence (CDS) from alignment at sc0000141:289553..299155-

>TCONS_00012206 ID=TCONS_00012206|Name=TCONS_00012206|organism=Clytia hemisphaerica|type=CDS|length=5598bp|location=Sequence derived from alignment at sc0000141:289553..299155- (Clytia hemisphaerica)
ATCAATCCAACATTATCTTGCTGAAAAGAACATAGAGTTTGAAGCGATCA
AAAAGTTTTATGAAACGATTGATTGCATTTATGACGAAGATAGCAATAAA
CTCGCAATTCTTTGGACTCATCACCTCTATCATCTTTGGAAGGAACCGAA
ATATAAAACAATTTTCATCGATATCATTGATTGCGGAATTTGGGTTATTT
ACTTGGACCTCGATAGAACCGGATACGATAATTTTAGCAAACAGATCGTT
AAAGAAAGTTATGAGGTACGATCACACAACAAAACTGACATCACTGTCTA
CTGGATAAAACATTGTATGATTGGTCGTGTGACTAAAGAAAATTTGAGAA
AACTGTTGAAGGAAGTGAAGACGAATGTTGTAGAGGAATCTCCTGAGAAA
GAATTACTCATCCAGAAAATTCAGAAGGATTTAGAAGACAATGATTACAA
TGATTACAGTGAAATTACAGCCATCTTAATTGATGGCGATTTTGAAGGGC
ATCAAAGTCAAGAAACGTTGAATTTTGAAGAAACATTCCCACTTGCTCTT
TCTTATAAGGAACTTGGAAACTACAATGCTGGATTGCAGTTGATAAAGAA
ATACTCAGACTTTAAATATGTATGGTATCCTTGTAAAACGTTGATTGCGT
GTTTATTGATACTGAATGGAATGGTGGAGGAAGGTTTAGAGATTTTTGAC
TCTTTGACTTTCGATGCTGATCAAGAATCATCAGAAGAAAGAATTTCATT
ATCTGAAGTCGGTCGTGCTCTTTTCGATACAGGAGCATACGAAAAATGTG
GAGAGATTTACCAGAGATTCCATCAATTTGCACTTTGGTTACCTTTCTTT
TCCTATCTCGACAGTTTTTGTAAAATGTTGATTCTGAAAAAAGTTGAAAC
TATTGATTTCATTAAAGGGCAATTATTGTTTTTCATTGATCCTAGGTATA
AATTAGAAAATTCTAATCCAACGAGAGTGGAATTCCGATGCAGAATACTT
TATATTTGTTGTTTCATTCGTGAGAATGATTTCAAAGAAGCCTCAAAACA
TTTGAAAAAGCTCTTCAAAAAGCTAAAGAGACCTAATCATCCAAATGATT
TAAGAGAGGCTTTATTCATGGCGAAGCATTTGAAATTACGTCAAGAACAC
GAACAAGCTTTGACTATACTTTTTATCGTGAAAAAACTTCAAAAGAAAAT
AAATGCTGAAACTTTGAAATTAAATGGGGTTGAGATCGATATTGATCGAG
ATATCGAGTTTTGTATAAATCGATTGGGTGGACTTCCCGAGCATCTTCGA
GAAAAAGAAACACGTGATTGTATTGTATTGTAAATGACAGCAGCACAATC
TTCACCAGTCAAATATTTCACACAAGAACACAAGAATCGTCATAATGTTG
ATATTCTCGAAGAAAAATCTCAGCAATGCCTCCTCAACGTTTTTCACAAA
CATTTTCCACGCAATCCAGTTGATTTATACAATGCTTTGTTACTACATAA
AAGGAAATTGAAACAACTTTTGAATCAACGGATCTTGAAACAAGATCAGT
ACGATGTGATTTATCCTGCATGTCAGAGGACTGACTCCTCACTTTTTGAC
GTCACTTTGACGTTCTTTATGATCCGTACTTTATGTGGATATCAAAAACC
ACGGACAGGTTGGGATTCGGAACCAGACCCTACCGATACTTCAGACATCG
CATATTGTATCATTCTAAAGATTGAACGCAACCAACTTAACCATAAAGCA
AATCGACAGATTACCAAAGCAGAATATAAGAGAATCTACAATCGGATGAG
TAAACCTTTAATCGCTTTAGGATGTCCTCCACAAGATCTCAAGCCTCTGT
CACCAACATTTATTTATCAGCTTCCAATCGAAAACCCAAACTTCGTTGGT
CGTGAAAATGAATTGAACAAAATTCACCAATCTCTCGTTACCGGAAATAA
ACTAGCCACGGTTATTTCAGGGATTCCAGGTCTCGGAAAATCAGAATTAG
CAAGGAGATATGTCACTGATTATGCTGCCAGATATAATAACATTTTGTGG
ATAAATGCCGAAACTATTGAGACAACTTACACCAATATAGCTCAGATTCT
CAGTTTCCCAGGACAATCGAATATCAAGGATATTTCACACATGCTTCATG
ACTATTTCAAAAACGAGGAGACACTTTTTGTCTTTGATAACTGCACTGAT
ATCAACCAGTTATCAGATGTTTTAAAACTTGGTCAAAAAACCATCATCAC
CACACAGCTTGGTAATTGGACCAACAATTACGAACATTTAAAAATGGAAA
CATGGCCTGAACAAACTGCTTACAAATTCGTCGAGAACAATCTGAAGGAT
GAGAAACATTTATTTAAAGATTTGATTGAAGAATTAGATTTCCATCCATT
AGCTATTAGTCATGCAGTAGCGTACGTCAAACAATCACAAACCTCTTTGA
AAGACTACCTCCAGCTTCTTCGAGATTACAAGCTCGATACTTTATCGCAA
AAAGCTGTCACTCATTATGGAGTTCGATCGTCCGTCTTTTCATCTTTTCA
AATCACTATCAAAAGAATCGAACAATCTAACGACCAATCGATGATGTCTT
TCCTATATTTATTCGGTATACTCGATGGTAGTTTTATCGACGAACGTTTC
CTTGAACGTTGCTTTGAGAACAAACTTGAATATACGAAAGCCAAAAAACT
TTTGTTAGATTATTCCATGATCAAATGCAATCAAAGGTTTCAAGAATTGA
CGCATCTAGCACCCGAAAATTTTTGGACGGTGCATTCCCTTTATCAAATA
TCAATCCAACATTATCTTGCTGAAAAGAACATAGAGTTTGAAGCGATCAA
AAAGTTTTATGAAACGATTGATTGCATTTATGACGAAGATAGCAATAAAC
TCGCAATTCTTTGGACTCATCACCTCTATCATCTTTGGAAGGAACCGAAA
TATAAAACAATTTTCATCGATATCATTGATTGCGGAATTTGGGTTATTTA
CTTGGACCTCGATAGAACCGGATACGATAATTTTAGCAAACAGATCGTTA
AAGAAAGTTATGAGGTACGATCACACAACAAAACTGACATCACTGTCTAC
TGGATAAAACATTGTATGATTGGTCGTGTGACTAAAGAAAATTTGAGAAA
ACTGTTGAAGGAAGTGAAGACGAATGTTGTAGAGGAATCTCCTGAGAAAG
AATTACTCATCCAGAAAATTCAGAAGGATTTAGAAGACAATGATTACAAT
GATTACAGTGAAATTACAGCCATCTTAATTGATGGCGATTTTGAAGGGCA
TCAAAGTCAAGAAACGTTGAATTTTGAAGAAACATTCCCACTTGCTCTTT
CTTATAAGGAACTTGGAAACTACAATGCTGGATTGCAGTTGATAAAGAAA
TACTCAGACTTTAAATATGTATGGTATCCTTGTAAAACGTTGATTGCGTG
TTTATTGATACTGAATGGAATGGTGGAGGAAGGTTTAGAGATTTTTGACT
CTTTGACTTTCGATGCTGATCAAGAATCATCAGAAGAAAGAATTTCATTA
TCTGAAGTCGGTCGTGCTCTTTTCGATACAGGAGCATACGAAAAATGTGG
AGAGATTTACCAGAGATTCCATCAATTTGCACTTTGGTTACCTTTCTTTT
CCTATCTCGACAGTTTTTGTAAAATGTTGATTCTGAAAAAAGTTGAAACT
ATTGATTTCATTAAAGGGCAATTATTGTTTTTCATTGATCCTAGGTATAA
ATTAGAAAATTCTAATCCAACGAGAGTGGAATTCCGATGCAGAATACTTT
ATATTTGTTGTTTCATTCGTGAGAATGATTTCAAAGAAGCCTCAAAACAT
TTGAAAAAGCTCTTCAAAAAGCTAAAGAGACCTAATCATCCAAATGATTT
AAGAGAGGCTTTATTCATGGCGAAGCATTTGAAATTACGTCAAGAACACG
AACAAGCTTTGACTATACTTTTTATCGTGAAAAAACTTCAAAAGAAAATA
AATGCTGAAACTTTGAAATTAAATGGGGTTGAGATCGATATTGATCGAGA
TATCGAGTTTTGTATAAATCGATTGGGTGGACTTCCCGAGCATCTTCGAG
AAAAAGAAACACGTGATTGTATTGTATTGTAAATGACAGCAGCACAATCT
TCACCAGTCAAATATTTCACACAAGAACACAAGAATCGTCATAATGTTGA
TATTCTCGAAGAAAAATCTCAGCAATGCCTCCTCAACGTTTTTCACAAAC
ATTTTCCACGCAATCCAGTTGATTTATACAATGCTTTGTTACTACATAAA
AGGAAATTGAAACAACTTTTGAATCAACGGATCTTGAAACAAGATCAGTA
CGATGTGATTTATCCTGCATGTCAGAGGACTGACTCCTCACTTTTTGACG
TCACTTTGACGTTCTTTATGATCCGTACTTTATGTGGATATCAAAAACCA
CGGACAGGTTGGGATTCGGAACCAGACCCTACCGATACTTCAGACATCGC
ATATTGTATCATTCTAAAGATTGAACGCAACCAACTTAACCATAAAGCAA
ATCGACAGATTACCAAAGCAGAATATAAGAGAATCTACAATCGGATGAGT
AAACCTTTAATCGCTTTAGGATGTCCTCCACAAGATCTCAAGCCTCTGTC
ACCAACATTTATTTATCAGCTTCCAATCGAAAACCCAAACTTCGTTGGTC
GTGAAAATGAATTGAACAAAATTCACCAATCTCTCGTTACCGGAAATAAA
CTAGCCACGGTTATTTCAGGGATTCCAGGTCTCGGAAAATCAGAATTAGC
AAGGAGATATGTCACTGATTATGCTGCCAGATATAATAACATTTTGTGGA
TAAATGCCGAAACTATTGAGACAACTTACACCAATATAGCTCAGATTCTC
AGTTTCCCAGGACAATCGAATATCAAGGATATTTCACACATGCTTCATGA
CTATTTCAAAAACGAGGAGACACTTTTTGTCTTTGATAACTGCACTGATA
TCAACCAGTTATCAGATGTTTTAAAACTTGGTCAAAAAACCATCATCACC
ACACAGCTTGGTAATTGGACCAACAATTACGAACATTTAAAAATGGAAAC
ATGGCCTGAACAAACTGCTTACAAATTCGTCGAGAACAATCTGAAGGATG
AGAAACATTTATTTAAAGATTTGATTGAAGAATTAGATTTCCATCCATTA
GCTATTAGTCATGCAGTAGCGTACGTCAAACAATCACAAACCTCTTTGAA
AGACTACCTCCAGCTTCTTCGAGATTACAAGCTCGATACTTTATCGCAAA
AAGCTGTCACTCATTATGGAGTTCGATCGTCCGTCTTTTCATCTTTTCAA
ATCACTATCAAAAGAATCGAACAATCTAACGACCAATCGATGATGTCTTT
CCTATATTTATTCGGTATACTCGATGGTAGTTTTATCGACGAACGTTTCC
TTGAACGTTGCTTTGAGAACAAACTTGAATATACGAAAGCCAAAAAACTT
TTGTTAGATTATTCCATGATCAAATGCAATCAAAGGTTTCAAGAATTGAC
GCATCTAGCACCCGAAAATTTTTGGACGGTGCATTCCCTTTATCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006866XLOC_006866Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012206-proteinTCONS_00012206-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012206-exon-sc0000141-1575043694:297513..299155TCONS_00012206-exon-sc0000141-1575043694:297513..299155Clytia hemisphaericaexon
TCONS_00012206-exon-sc0000141-1575043694:296127..297475TCONS_00012206-exon-sc0000141-1575043694:296127..297475Clytia hemisphaericaexon
TCONS_00012206-exon-sc0000141-1575043694:289553..289799TCONS_00012206-exon-sc0000141-1575043694:289553..289799Clytia hemisphaericaexon
TCONS_00012206-exon-sc0000141-1510915933:297513..299155TCONS_00012206-exon-sc0000141-1510915933:297513..299155Clytia hemisphaericaexon
TCONS_00012206-exon-sc0000141-1510915933:296127..297475TCONS_00012206-exon-sc0000141-1510915933:296127..297475Clytia hemisphaericaexon
TCONS_00012206-exon-sc0000141-1510915933:289553..289799TCONS_00012206-exon-sc0000141-1510915933:289553..289799Clytia hemisphaericaexon
TCONS_00012206-exon-sc0000141-1491911889:297513..299155TCONS_00012206-exon-sc0000141-1491911889:297513..299155Clytia hemisphaericaexon
TCONS_00012206-exon-sc0000141-1491911889:296127..297475TCONS_00012206-exon-sc0000141-1491911889:296127..297475Clytia hemisphaericaexon
TCONS_00012206-exon-sc0000141-1491911889:289553..289799TCONS_00012206-exon-sc0000141-1491911889:289553..289799Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000141supercontigsc0000141:289553..299155 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0401198 0.112749 0.258215 0.273923 1.033 0.551069 1.44036 1.04186 0.324792 0.523944 0.396266 0.487215 3.93347 3.29825 0.677309 1.17886 0.67804 0.7913 3.81084 7.98715 1.6471 1.70381 0.815313 1.12677 0.682181 1.23664 3.54169 2.97132 1.03815 1.21388
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002182NB-ARC
IPR011990TPR-like_helical_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0043531ADP binding
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0043531 ADP binding
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012206 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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