XLOC_006866 (gene) - C. hemisphaerica

Overview
NameXLOC_006866
Unique NameXLOC_006866
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000141:289553..299161-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006866 ID=XLOC_006866|Name=XLOC_006866|organism=Clytia hemisphaerica|type=gene|length=9609bp|location=Sequence derived from alignment at sc0000141:289553..299161- (Clytia hemisphaerica)
GATCAAGATTTTTTTTTTGTCTGTCATTTTGATGAAAGAAGTATTTTTGA TGAATATTGACACCAATGAAAAAACCTTAGTTCATATGATCAAAATAAAT TTTGCTTTATTGTTTGTCAAAACGTTTTCACAGTTGAAAGAGAAGGTGCT GACATTTGAAAGCTTGATGTTTGATGGGTTGAGATGACAGCAGCACAATC TTCACCAGTCAAATATTTCACACAAGAACACAAGAATCGTCATAATGTTG ATATTCTCGAAGAAAAATCTCAGCAATGCCTCCTCAACGTTTTTCACAAA CATTTTCCACGCAATCCAGTTGATTTATACAATGCTTTGTTACTACATAA AAGGAAATTGAAACAACTTTTGAATCAACGGATCTTGAAACAAGATCAGT ACGATGTGATTTATCCTGCATGTCAGAGGACTGACTCCTCACTTTTTGAC GTCACTTTGACGTTCTTTATGATCCGTACTTTATGTGGATATCAAAAACC ACGGACAGGTTGGGATTCGGAACCAGACCCTACCGATACTTCAGACATCG CATATTGTATCATTCTAAAGATTGAACGCAACCAACTTAACCATAAAGCA AATCGACAGATTACCAAAGCAGAATATAAGAGAATCTACAATCGGATGAG TAAACCTTTAATCGCTTTAGGATGTCCTCCACAAGATCTCAAGCCTCTGT CACCAACATTTATTTATCAGCTTCCAATCGAAAACCCAAACTTCGTTGGT CGTGAAAATGAATTGAACAAAATTCACCAATCTCTCGTTACCGGAAATAA ACTAGCCACGGTTATTTCAGGGATTCCAGGTCTCGGAAAATCAGAATTAG CAAGGAGATATGTCACTGATTATGCTGCCAGATATAATAACATTTTGTGG ATAAATGCCGAAACTATTGAGACAACTTACACCAATATAGCTCAGATTCT CAGTTTCCCAGGACAATCGAATATCAAGGATATTTCACACATGCTTCATG ACTATTTCAAAAACGAGGAGACACTTTTTGTCTTTGATAACTGCACTGAT ATCAACCAGTTATCAGATGTTTTAAAACTTGGTCAAAAAACCATCATCAC CACACAGCTTGGTAATTGGACCAACAATTACGAACATTTAAAAATGGAAA CATGGCCTGAACAAACTGCTTACAAATTCGTCGAGAACAATCTGAAGGAT GAGAAACATTTATTTAAAGATTTGATTGAAGAATTAGATTTCCATCCATT AGCTATTAGTCATGCAGTAGCGTACGTCAAACAATCACAAACCTCTTTGA AAGACTACCTCCAGCTTCTTCGAGATTACAAGCTCGATACTTTATCGCAA AAAGCTGTCACTCATTATGGAGTTCGATCGTCCGTCTTTTCATCTTTTCA AATCACTATCAAAAGAATCGAACAATCTAACGACCAATCGATGATGTCTT TCCTATATTTATTCGGTATACTCGATGGTAGTTTTATCGACGAACGTTTC CTTGAACGTTGCTTTGAGAACAAACTTGAATATACGAAAGCCAAAAAACT TTTGTTAGATTATTCCATGATCAAATGCAATCAAAGGTTTCAAGAATTGA CGCATCTAGCACCCGAAAATTTTTGGACGGTGCATTCCCTTTATCAAATA TCAATNATTTTGGACGGTGCATTCCCTTTATCAAACATCAATCCAACATT ATCTTGCTGAAAAGAACATAGAGTTTGAAGCGATCAAAAAGTTTTATGAA ACGATTGATTGCATTTATGACGAAGATAGCAATAAACTCGCAATTCTTTG GACTCATCACCTCTATCATCTTTGGAAGGAACCGAAATATAAAACAATTT TCATCGATATCATTGATTGCGGAATTTGGGTTATTTACTTGGACCTCGAT AGAACCGGATACGATAATTTTAGCAAACAGATCGTTAAAGAAAGTTATGA GGTACGATCACACAACAAAACTGACATCACTGTCTACTGGATAAAACATT GTATGATTGGTCGTGTGACTAAAGAAAATTTGAGAAAACTGTTGAAGGAA GTGAAGACGAATGTTGTAGAGGAATCTCCTGAGAAAGAATTACTCATCCA GAAAATTCAGAAGGATTTAGAAGACAATGATTACAATGATTACAGTGAAA TTACAGCCATCTTAATTGATGGCGATTTTGAAGGGCATCAAAGTCAAGAA ACGTTGAATTTTGAAGAAACATTCCCACTTGCTCTTTCTTATAAGGAACT TGGAAACTACAATGCTGGATTGCAGTTGATAAAGAAATACTCAGACTTTA AATATGTATGGTATCCTTGTAAAACGTTGATTGCGTGTTTATTGATACTG AATGGAATGGTGGAGGAAGGTTTAGAGATTTTTGACTCTTTGACTTTCGA TGCTGATCAAGAATCATCAGAAGAAAGAATTTCATTATCTGAAGTCGGTC GTGCTCTTTTCGATACAGGAGCATACGAAAAATGTGGAGAGATTTACCAG AGATTCCATCAATTTGCACTTTGGTTACCTTTCTTTTCCTATCTCGACAG TTTTTGTAAAATGTTGATTCTGAAAAAAGTTGAAACTATTGATTTCATTA AAGGGCAATTATTGTTTTTCATTGATCCTAGGTATAAATTAGAAAATTCT AATCCAACGAGAGTGGAATTCCGATGCAGAATACTTTATATTTGTTGTTT CATTCGTGAGAATGATTTCAAAGAAGCCTCAAAACATTTGAAAAAGCTCT TCAAAAAGCTAAAGAGACCTAATCATCCAAATGATTTAAGAGAGGCTTTA TTCATGGCGAAGCATTTGAAATTACGTCAAGAACACGAACAAGCTTTGAC TATACTTTTTATCGTGAAAAAACTTCAAAAGAAAATAAATGCTGAAACTT TGAAATTAAATGGGGTTGAGATCGATATTGATCGAGATATCGAGTTTTGT ATAAATCGATTGGGTGGACTTCCCGAGCATCTTCGAGAAAAAGAAACACG TGATTGTATTGTATTGTAAATTTTACTTTCGTAACATTAGTGGACTTGGT GAATTAAGGGTTAGACAGAAATATTTTAATTTTAACACAGGACATTACAA TGCGGATTTAATTTGGCGATGAATCAATTTCGTAAAATTTAGCGGGGATT TAATTTGGCGAGTGATCAGTTTTTGAAATTTTTGTGGGGAGTTGATTTGG CGAATTTTGTTAAAATTCACCATTCACACCATACACTTTCTGAGAAAAGT ACAAAATATTATCACTTCTAAATACTTTACGCATTCTACTTTATCCTAGC TTGTTCTTATACACTTATTTGTAATTTATTAACTTTATCTAACTTTTATT ATTAAGAATTCAAAAAGAAATTGTTGGGTTCATTTTTCAACTGACAAGAT TTACCTCTTTCCGATATTGATGATTTCTCACTAGCCACTTGTATGTGTGT GTCTTTTATGTGACAGAGACGGTTAGCTTCTGATTTGTGTAGATCCTGAT TGTCTGAGAATGATAGTAATTCAACACTTTTCCATCCGCGATTGCCAAAT CGTTTAAGTCAGTCCACCGCCCTCAAGAGTATAATTTATCGGCCCTTTTT ACCCAGGCCCTTATTGGTGTTATTTTCGAAAATTTTCCAACCCCCCCGAC CTTATTAGGACCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTCCGT TTATTTGGAACCTAAGAGTAATAGGGGATTGTGTTTAAATGGATCGGTAA AGCAAGGCCGGTGTAAAAAGGGCCAGTAAGGTACATAAACTCCCTATTTA AAACTCCGAGGACGGCAGATTGAACCAGCATAGAATTATCTTTAAACTGT AATAAATTGAATGAAAACTCTATTCATGGCTTATACTACGCTACGGCATA TCTTCCTTCGTTTCGAGCGTAAAACTCCTACTCTTCGGGCTATGAGCACT GCTCTTGTTTTGAATATTGAAATTCTCCAGATAAATCGCATGCGCACTNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTATTATGTTTAAA CCTATTAATAAGCAATTCCCGGTGGGGGTCACTAGTGACCGCCTATAGCA GTGCCTATAGACCAAGAGTAAGGCCTAAAAGCCTGGATCTGTCTATTGTG TAGACTAGGCTTATACTACGTCTATCATATTTTACAAGTTTTAAGATGCA TGGAAATGAAGCCCTCTTATTTGGGAGTTTCTAAACATCGACCAGAAATG GCGACCACGACCAGCGGCCACAACCGGCGACCAGATAAATTTGGATTATC GAGTTCATCTGCTCTCTCCACCATAGAGAATGTTTAAATTAAGTCCTCAG AATACTAAAAAGTGACTTTTGAAGTAACCAGTCGTTTTCTTGACATCTTG ACAAAGTGATACAATTTGACAAAAAATATTGACAGGAACATTAAGTATGA TGTTTGTAAGCTTTGTTGCACCGACTATTTTATTATGCTAAATGAGATGC CTTTAGTATGAATATATAGAACTTGTCAGTAGGAAAAAATCGGGAAGGCC AGTTTTAGAGACATGCTGATAATACAAAAGGATGGAAATTGAAACCATAA TCAAGCTCCAAGAGCGTCGAAATGGTTGTTTTAAGTATTTGGTACGTGGC TTTGAATAGATGAGACAGGATTAGAGCTTACTCTTCAATATGATATATAT GCAAATGATTAGGAGAGACTTGATAACAAATCCGAATTTTGATCAAGTAA GTTTATCATGAAAACAGACAAGTTATTATCGTGACATTGATGATAGCATA TTTTCAGGTGAAAAATGACGCCTAAAATATGCTAATTATTTGATCAGGTA CTTTAGCAAAACTGTAAATATGATATCGAAACATTTTTTTCTGACCAGTT AAGCTTCATGCTTTTCAGGCATTCAAACATTTTTTTTGACCTGTTAACTA TCATGATAAATATTAGTGCGATTTTGTAGCAGAAATAAGCCACGGGTACT TTATTGAATTTGGACGACAATGATATTGCGAAATACGACAGAAAGTTGCC AAGTTTAAGGATTTGGAATGTAAAAATCATCGATCATCAAAAAATGTAAT TTGATTCGCCCTTTAAAAGACGACAATGATATTGCAAAATACAACAGAGA GTTGCCAAGTTTAAGGATTTGAGAAGTAAACATCATCAATCATCAAAAAA ACATAAAAAGAGGTCACAAAGCAAAATTAGATCGAAAGGGTTTCGCTCCA CTATTTTCATTGGAATTGAAATGCTCCGTTTCGTTGAAAGACTTTCCAAG GGAGGGGAAGGTTCAAAGTTTATGCCAAAAAGTGTTTTCTCCATCTTTGT TCCCTATAATATGAGAAGGAAAAAAGGTCTAAAGTTTTCGAGCAAAAGCA TGACTAAATTAAGGAACAATACTATTTTCCCCGGCCATTTACTAGTCAAA TCCTTTCAAAAAAGTTTCCAAAAGGCGGTCAATCAGCAGAGCCTCCCATT AGCGGACAAAGTTTTTGCACTAAATGGCCAAAAACCGAGTTTTTACTCTC TAATTAGCAGTTATCAACGGTCAAACTAGTGAAACTGGTCAAAGACTTTA AAAAATTAGACAGGATTGATTTCTCAAAACTATTTATTTCACTTCAAAGT TACGTTGAAGGAGTTGCTTAAAGACGTTTGGAGCACTTCCTTTCATCCAG TCGGTGAATTTGCTTACGTCATAGAATTTACAGGGACCTCAAGACTACTA TGACTCATTAATTCTAAATCGTTGCATTTGAATAATCATCATCTTGTCCT TTCAAGTGTCTCTAGAAAAGCATTTCGGTCCAAAATTTTATTTACTGAAC CCCTGTACCTTATACTGAAATTAGAGCACAAAATCAAAAAGTTTCTAAAA GGCGGACACTTCTAATAAGCGGACAGTAACCTTATTTCCCGATGGTGTCC ACTAATTGGAGGTTAAACTGTATTTAAGTTATTAGTTTTGACTTTTAGTA AGGAAACGTTACAATTAAAACGAAAATGAAATGAAAACTTAAGTTTCTGT GAACCGAAAGGACATCAAATTCAACCATTTACAATTAAGCCGTTTCAGGC TAAACAATGTTTATAAAATGTTCTTAAAGAAAAAGAGTGTGTAATATTTT GTTGTGATGTGTTATTTAATTGAACTTTGAACAGATCTGATTACAAAAAC AAACACAATGACATAAGATAAATATTGGTATCATCTAACAGTGACATTTT GAAGTTAGTGATAGAGAAAATTTTTCATGAAGTAGCGAACGTTAGGAAAT GGCAACAGCCGCATCAGGAACACAAACTTCACCAGTCAAATATTTCACAC AAGAACACAAGAATCGTCATAATGTTGATATTCTCGAAGAAAAATCTCAA CAATACCTCCTCGATGTTTTTCACAAACATTTTCCACGCAATCCAGTTGA TTTATACAATGCTTTGTTACCACACCAAAGGAAATTGAAACAACTTCTTA ATCAACGGATTTTGAAACAAGATCAATACGATTTGATTTATACAGCATGT CAGAGAACCGACTCCTCACTTTTCGACGTCACTTTAACGTTCTTTATGAT CCGTACTTTATGCGGATATCAAAAACCACGGACAGGTTGGGATGCGGAAC CAGACCCTACCGATACTTCAGACATCGCATATTGTATCATTCTAAAGATT GAACGCAACCAACTTAACCATAAAGCAAACCGACAGATTACCAAAGCAGA ATATAAGAGAATCTACAATCGTATGAGTAAACCTTTAATCGCCCTAGGAT GTCCTCCACAAGATTTGAAGCCTCTGTCACCAACTTTTATTTATCAGCTT CCAATCGAAAACCCAAACTTCGTTGGTCGTGAAAATGAATTGAACACAAT TCACCAATCTCTCGTTACCGGAAATAAACTAGCCACGGTTATTTCAGGGA TTCCAGGTCTCGGAAAATCAGAATTAGCAAGGAAGTATATCACTGATTAT GCTGCCAGATATAATACCATTTTGTGGGTTAATGCTGAATCTATTGACAC AACTTACACCAATATAGCTCAAATTCTCGGTTTCCCAGGAAAATCGAATA CCAAGGATATTTCACACATGCTTCATGACTATTTCAAAAACGAGGAGACA CTTTTTGTCTTTGATAACTGCACTGATATCAACCAGTTATCAGATGTTTT ACAACTTGGTCAAAAAACCATCATCACCACACAGCTTGGTAATTGGACCA ACAATTACGAACATTTAAAAATGGAAACATGGCCTGAACAAACTGCTTAC AAATTCGTCGAGAACAATCTGAAGGATGAGAAACATTTATTTAAAGATTT GATTGAAGAATTAGATTTCCATCCATTAGCTATTAGTCATGTAGTAGCGT ACGTCAAACAATCACAAACCTCTTTGAAAGACTACCTCCAGCTTCTTCAA GATTACAAGCTCGATACTTTATCACAACAAGCTGTCACCCATTATGGAGT TCGATCGTCCGTTTTTTCATCTTTTCAAATCACCATCAAAAGAATCGAAC AATCTAACGACCATTCGATAATGTCTTTCCTATATTTAATCGGATTATTT GATGGTAGTTTTATCGACGAACTTTTCCTTGAACATTGCTTTGAGAACAA ACTTGAATATACGAAAGCCAAAAAACTTTTGTTAGATTATTCCATGATCA AATGCAATCAAAGGTTTCAAGAATTGACGCATGCAGCACCTGAAAAATTT TGGACGGTGCATTCCCTTTACCAAAAATCAATCCAACATTATCTTTTCGA AAAGAACATGGAATTTGAAGCGATCAAAAAGTTTTATGAAACGATTGTTG ATTGCATTGATGACGAAGATAGCAATAAGCTCGCAGTTCTTTGGGCTCCT CACCTCTATCATCTTTGGAAGGAACCAAAATATAAAACAATTTTCATCGA TATCATTGATAACAGAATTCGGGATATTTACGTGTACCTCAGTAGAACAG GATACGGAAATTTAAGGGAACACCTCGTTAAAGAAAGTTATGAGGTACGA TCACACCACAAAACTGACATCACTGTCTACTGGATAAAATATTGTATGGA TGATCGTCTGAAAAAACTGTTGAAGGAAGTAAAGACGAATGTTGTAGAGG AATCTCCTGAAAAAGAAAAACTAATCCAGAATATTCAGGAAGATTTAGAA GGTATTGATTACCGTTACTCTGCAGCTATCCTTTTTGATGGTGATTTTGA AGAGCATCAAAGTCGATTACAATCGCAACAAACGTTGAATTTTGATGAAA CATTCAAGCTTGCTCTTTCTTATAAAGAACTCGGAAACTACGATGCTGGA TTACAGTTGATAAAGAAATATTCAGACTTGAAATATATAACGTATACTTG TAAAACGTTGATTGCGTGTTTATTGATACTGAATGGAATGAGGGAGAAAG GTTTAAAGATTTTCAACGCTTTGACTGATCAAGAATCATATGAAGAAGAC ATCACTTTATCTGAAGTCGGTCGTGCTCTTTTCGATACAGGAGCATACGA AGAATGTGGAGAGATTTACCAGAGATTCCGTCAATCTGCACCAGGGACAC CTTACTTTACATATCTCGACAGTTTTTGTAAAATGTTGATTCTGAACGAA GTTGAAACTATTGATTTCGTTAAAGAGCGATTCTTGCATTCTATTGGTCC AAGTATAAATTATCTGAGCAACCATCTTAATCCAACGAGAACGAAATTCC GAAGCAGAATACTTTATATTTGTTGTTTCATTCGTGAAAATGATTTCAAA GAAGCCTCAAAACATTCGAAAAAGCTCTTCAAAAAGCTAAAGAGACAGTA TCATCCAAATGATTTAAGAGAGGCATTATTCATGGTGAAGCATTTGAAAT TACGTCAAGAACATGAACAAGCTTTGACTATTCTTTTTGTCGTAAAAAAA ATTCAAAAGAAAATGAATGCTGAAACATTGAAATTAAATGGGGTTGAGAT CGATATTGATCGAGATATCGAGTTTTGTATAAATCGATTGGGTGGACTTC CCGAGCATCTTCGAGAAAAAGAAAAACGTGATTGTATTGTATTGTAAATT TCCTTTTGTAACATTAGTGTACGTTGTAATGTAAGAGGGTAAACAGAAAT ATTTGAATTTTAACACAGGATATTACGATAAGGACCTACTTTATGCCATA GAATGAATGTCTCCAGGTAGTTTATTTTTAACAAAATGAAGCATTTTACC TTAAGTGGATTAATTTTGGCGTGGATTTAATTTGGGGATGGATCAATTTC GTAAAATTTAGGGGGAATTTAATTTGTCGAAAACATTACGCATTCTACTT TATCCTAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012208TCONS_00012208Clytia hemisphaericatranscript
TCONS_00012207TCONS_00012207Clytia hemisphaericatranscript
TCONS_00012206TCONS_00012206Clytia hemisphaericatranscript
TCONS_00012205TCONS_00012205Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012206-proteinTCONS_00012206-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000141supercontigsc0000141:289553..299161 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11 0.21 0.42 0.27 1.31 0.63 2.04 3.1 0.93 0.73 0.68 0.6 4.73 3.38 1.57 1.85 1.42 1.78 5.26 10.16 3.86 4.1 2 1.94 1.08 1.96 6.56 5.17 1.57 1.71