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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012190 ID=TCONS_00012190|Name=TCONS_00012190|organism=Clytia hemisphaerica|type=transcript|length=242bp
TACAAACACGTCACTAAAAAGGGTCATGAATTGGCTGGCACAGAACGTCA
TGATAACGTCGATCTGACATCCCTAACGTCCATTAAACGTTAAATGTACG
TTAAAAgaacgttttgtgccagctggtaCTGATCCGACCTGATTAAATTC
TGCTCTCAAAAATGAACTTACAAAATTGTAAAACAATCAAAGCCTAGACT
CTCTGATTAAAATGTTTTATTCGTTACAATCTTTGGTATATT Run BLAST on NCBI transcript from alignment at sc0000141:95153..98996- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012190 ID=TCONS_00012190|Name=TCONS_00012190|organism=Clytia hemisphaerica|type=transcript|length=3844bp|location=Sequence derived from alignment at sc0000141:95153..98996- (Clytia hemisphaerica)
TACAAACACGTCACTAAAAAGGGTCATGAATTGGCTGGCACAGAACGTCA
TGATAACGTCGATCTGACATCCCTAACGTCCATTAAGCGTTAAATGTACG
TTAAAACAACGTTTTGTGCCAGCTGGTACTGATCCCACCTGATTAAATAA
ATTCTGCTCTCAAAAATGAACTTACAAATGATAAAACAATCAAAGCCTAG
ACTCTCTGATTAAAATGTTTTATTCGTTACAATCTTTGGTATATTTGATT
CACTTTAAAATTCCAAAAACAATTGCGGATTGTTTATCACCAAAATAAAA
ATCTGTTGAAACATTATAAACATGCCAAAATTCATAAGAAGCGTTCTGAC
TCATTCGTCCAAACTTTAAACATTTTCCAAAATCCTTTGTATGGAGAAGA
AAGAAAGTTGCAGTTTTCCATGCAATTTTCAAATCTTCAACCAGAAATTC
CGCCAAATGTTCTTTGTAACTGTTGTCTTTTCTGTTCACGAAACACAGAA
CACCATAGCCCTGGTTGAATTCCTTTCTCATGAACAAATATTTATCCTTC
TTGAACACTTTTTTATTTCCCATCATCCCGGAAATCGCTTTGTACCAGTC
ACCATAAGAAGGGTACAAAAGTGAAGATTTGTTTCCTTCGTGAAAATATT
CTGCTCCCCAAACCAAACGATCGATCGTCGTCATATTTTCCTCAACTTTA
TCCGCAGCTTGGTTTTGCTTTTGAATGACCCTTTTCAAATTTTCAATTTC
TCTATTCAAATGTTGGACAGTTGCTTCTTTCTCTGTTATTTCTTTCTCCC
TCTCGTTCAATTTTGTCTCCGTTAGTAAGATTTTAATTTTGTGTTCATTT
TCTAAATCTTTCATTTTCATTTTCCATTCATTTTCCAAGTCTTTTATTTT
CATTTTCCATTCATTTTCTTGTTCTTTCTTGTACAGAACCATTTCGTGCT
CTTTGGCTAGCAATTGTTTCTCCTTTTCAACCAAGTTATTTTGCAGCTCG
ATGTTTTGTTTTTGGAGTTGTTGATCGGCTTGAACTTGACTTGATTGAGA
TTCACGAGAATTCTTTAATTTGAACATCTCAAATTGATGAGATAAAGTTT
GATTTTCTTTTTCTAGCTGCATGGTTTTCATTTGTGATTCCATCAATTCT
ATCTTTGATTCATAGGTCAGTTTTTGAATTTCTTTTTGATGTTCTTCTTT
GAGTTTCACAATCTCTCCACTATCCATTTCCACCATCGGATTTCTACCGA
CAGCACTGTGAGCTAAATTTCTTTTATCTTCAGGATTCATTTTTTCTTAA
ACAGCATCAACAAACACCGTACATACAGAGACTCAGACACAAACAAGGAC
GAATAAAAACTCAAGGCTTCAAAAACGCAAGTAGTTGTCTCAAATCACCC
AAACTGTTTTTAAAATAACATCAAATTATGCTCCCCCCTCTGTCTTTCTA
TTGATTTAGTTTCATATGTCATTCTTGCTCAAACAAAACAAATTTTAGAT
GTCATGACAACTTCAGTTGACCGCTGCGCGGACCTGACTGAATGATAGAA
AGGCGCCTAGTGGTAAAACTTCAAACTAATTTGCTGGAGGACAGAATCAA
GTTAATCAGGGCCAAATTTGGAGGTTCTTGGATCACTCGTTGACCAAAAA
TGGTCAAAAGACGGTCAAAATCTTAAAAAAGTGGATTTTTGTCAAATTTT
TGTGTTTTTTTTGACTTTTTAGCTTAAAATCTCGCTGAAAAGACTCACTT
TTGATTTGTTTTTTTGCTTGGCCATGAAGCCCAATCCGATTTCTACAAGT
TAGACCAAAAATGATGATTTCTAACTCAAACTGGGTATTACAAGAGGGCT
TCGTCCTCCTACATAGACCATGTCTGATATATACGACATTGGCACTTAAA
GGGTTAAAAAAGGGCTCTTTTTCGTTATTTGTTTGATGGTATTTGTAGTC
AATCAGTGATTGATCTTTCGATTGAATAATAAATCAATATTCAAAAGTTT
TTCACATTAATGATGTTCTAAGATCTAAGAATCACTCGTGTGAAAATGAT
AATCATAGCACAATTATTGAAGAAGTTGATTTTCTTCTTCTTCATTTTCA
ATCTTTATTTTCCGATCTTTTTTGAGTTTTTTCTTTATGATAATATTCCA
CTCCTGTTTGTCGTTTCAACAAACACAACACCACTATATAATCAGGGGGG
GGGTCGGTAGTAAAATCTCAGACATAATGACGTTTACTACGGTGGTGGTG
TGACGAAAAATCGAAAAAAACTTTTANTTTTCCCCCCCCCCCCCCCCCCC
CTGATATAATTCAAATTCTATCAACAGTTATAGCCATTTTTGTCTCCCCT
GCAAATTATATTGAGACAGACTTTAGTTTTAGTTTTTAAACAATTACCCT
CAATTCAAATCGAGCACATATCATTTTCACATCACTCAGATAAGGATAAA
GCTATTGTTCATTTCTGCCGAAAAATTGTCAAAGTTAATGAGCTATATTT
CTCGTTCGTTAGTTCTCGGTTTGAGTAAACCTTATCGGAGAATAATTCGA
TTGCCTAATAATTCTTTTTCTAGCTGCATGGTTTTCAACGTTTTCTCGTT
CTCAGATTCCAGTTGTTGAATCTTAAATTCCATTTTGAGTTTCTCANTAA
ATACTAAAATGGGTGGTATCTATGTGTTAAATGTTGAAAAAATTTTACTA
CCTGGGTAGTTAAACTGGTAAAATTAGCAAATTTTAGCTCTATTATTGTA
ATTCTCTCAATTTTTTGGATGACTTTTCCGAAAAAATATCTGAAGATTTT
TATAATTTGAAAAAATTTTCTGTTGGAAAGTTGTTTGCTGCAAACAAAAA
ATCCTCGAAATTTTTTGTCAATATGNCATTTTGAGTTTTTCGATCTCTTT
TTGATGTTCTTTTTTGAGCTTTGTAATTTGCTGATCGTCAGCAACTTTGT
GCACATTCCTCCCACTAGCACTAACACTTTTTTTGCGATCTCGCCTTCCT
AAAGAAAAGTCGGATCTTCTCAATACAGTAAAAGGTAGGACACAAAATAT
TCGAGACAAGAAACAAGCCATAATGAATGATTCAATAAAATTTCTTTCTT
TTGTAAAATTTTTTTCCATAATGTATNTAAAGAAAAGTCGGATCTTTCTC
AATACAGTATAAGGTAGGACACAAAATATTCGAGACAAGAAACAAGCTAT
AATGAATGATCCAATAATATTTCTTCCTTTTGGAAAAGTTTTTCCATACT
GTACTTAAATCTAAAGATACTAAAATTTTCGTATAAAGTGCACCCACTAT
TATAAGAAGTGGTATTTAAAAAAAAAACTTAAAGAAAAATGAAATTGCTA
GTTTTAGTAATAAAATGTAGTAAGATTTCTCGTGTCTTCCTTTTTATACA
ACCATTTTGGTATTTTAGTACCAAATGACACCAAAACACCCCTGTCTCAC
AGCCCCAAGGGAGCCTCTTTCCAGAGTGGGAATGAAGATTTCTATCGAAA
TGCCAATGGGGATAGAAGTTCTTTTGTCCTCAGGTTCACAAAACTGTGGG
AAAGGTTTTGTAGTGCAATTGCTTTCTTTTCGAGTGAAGCTGGGGTTCCG
TATACAAACACGTCACTAAAAAGGGTCATGACTTGGCTGGCACAGAATGT
CACAATAACGTCCATCTGACATCCCTAACGTCCATTAAACGTTAAATGTA
CGTTAAAAGAACGTTTTGTGCCAGCTGGTACTGATCCGACCTGATTAAAT
TCTGCTCTCAAAAATGAACTTACAAAATTGTAAAACAATCAAAGCCTAGA
CTCTCTGATTAAAATGTTTTATTCGTTACAATCTTTGGTATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012190-exon-sc0000141-1575043694:98929..98996 | TCONS_00012190-exon-sc0000141-1575043694:98929..98996 | Clytia hemisphaerica | exon |
| TCONS_00012190-exon-sc0000141-1575043694:95153..95326 | TCONS_00012190-exon-sc0000141-1575043694:95153..95326 | Clytia hemisphaerica | exon |
| TCONS_00012190-exon-sc0000141-1510915933:98929..98996 | TCONS_00012190-exon-sc0000141-1510915933:98929..98996 | Clytia hemisphaerica | exon |
| TCONS_00012190-exon-sc0000141-1510915933:95153..95326 | TCONS_00012190-exon-sc0000141-1510915933:95153..95326 | Clytia hemisphaerica | exon |
| TCONS_00012190-exon-sc0000141-1491911889:98929..98996 | TCONS_00012190-exon-sc0000141-1491911889:98929..98996 | Clytia hemisphaerica | exon |
| TCONS_00012190-exon-sc0000141-1491911889:95153..95326 | TCONS_00012190-exon-sc0000141-1491911889:95153..95326 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000141 | supercontig | sc0000141:95153..98996 - |
Blast
The following BLAST results are available for this feature:
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