XLOC_006859 (gene) - C. hemisphaerica

Overview
NameXLOC_006859
Unique NameXLOC_006859
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000141:95153..98996-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006859 ID=XLOC_006859|Name=XLOC_006859|organism=Clytia hemisphaerica|type=gene|length=3844bp|location=Sequence derived from alignment at sc0000141:95153..98996- (Clytia hemisphaerica)
TACAAACACGTCACTAAAAAGGGTCATGAATTGGCTGGCACAGAACGTCA
TGATAACGTCGATCTGACATCCCTAACGTCCATTAAGCGTTAAATGTACG
TTAAAACAACGTTTTGTGCCAGCTGGTACTGATCCCACCTGATTAAATAA
ATTCTGCTCTCAAAAATGAACTTACAAATGATAAAACAATCAAAGCCTAG
ACTCTCTGATTAAAATGTTTTATTCGTTACAATCTTTGGTATATTTGATT
CACTTTAAAATTCCAAAAACAATTGCGGATTGTTTATCACCAAAATAAAA
ATCTGTTGAAACATTATAAACATGCCAAAATTCATAAGAAGCGTTCTGAC
TCATTCGTCCAAACTTTAAACATTTTCCAAAATCCTTTGTATGGAGAAGA
AAGAAAGTTGCAGTTTTCCATGCAATTTTCAAATCTTCAACCAGAAATTC
CGCCAAATGTTCTTTGTAACTGTTGTCTTTTCTGTTCACGAAACACAGAA
CACCATAGCCCTGGTTGAATTCCTTTCTCATGAACAAATATTTATCCTTC
TTGAACACTTTTTTATTTCCCATCATCCCGGAAATCGCTTTGTACCAGTC
ACCATAAGAAGGGTACAAAAGTGAAGATTTGTTTCCTTCGTGAAAATATT
CTGCTCCCCAAACCAAACGATCGATCGTCGTCATATTTTCCTCAACTTTA
TCCGCAGCTTGGTTTTGCTTTTGAATGACCCTTTTCAAATTTTCAATTTC
TCTATTCAAATGTTGGACAGTTGCTTCTTTCTCTGTTATTTCTTTCTCCC
TCTCGTTCAATTTTGTCTCCGTTAGTAAGATTTTAATTTTGTGTTCATTT
TCTAAATCTTTCATTTTCATTTTCCATTCATTTTCCAAGTCTTTTATTTT
CATTTTCCATTCATTTTCTTGTTCTTTCTTGTACAGAACCATTTCGTGCT
CTTTGGCTAGCAATTGTTTCTCCTTTTCAACCAAGTTATTTTGCAGCTCG
ATGTTTTGTTTTTGGAGTTGTTGATCGGCTTGAACTTGACTTGATTGAGA
TTCACGAGAATTCTTTAATTTGAACATCTCAAATTGATGAGATAAAGTTT
GATTTTCTTTTTCTAGCTGCATGGTTTTCATTTGTGATTCCATCAATTCT
ATCTTTGATTCATAGGTCAGTTTTTGAATTTCTTTTTGATGTTCTTCTTT
GAGTTTCACAATCTCTCCACTATCCATTTCCACCATCGGATTTCTACCGA
CAGCACTGTGAGCTAAATTTCTTTTATCTTCAGGATTCATTTTTTCTTAA
ACAGCATCAACAAACACCGTACATACAGAGACTCAGACACAAACAAGGAC
GAATAAAAACTCAAGGCTTCAAAAACGCAAGTAGTTGTCTCAAATCACCC
AAACTGTTTTTAAAATAACATCAAATTATGCTCCCCCCTCTGTCTTTCTA
TTGATTTAGTTTCATATGTCATTCTTGCTCAAACAAAACAAATTTTAGAT
GTCATGACAACTTCAGTTGACCGCTGCGCGGACCTGACTGAATGATAGAA
AGGCGCCTAGTGGTAAAACTTCAAACTAATTTGCTGGAGGACAGAATCAA
GTTAATCAGGGCCAAATTTGGAGGTTCTTGGATCACTCGTTGACCAAAAA
TGGTCAAAAGACGGTCAAAATCTTAAAAAAGTGGATTTTTGTCAAATTTT
TGTGTTTTTTTTGACTTTTTAGCTTAAAATCTCGCTGAAAAGACTCACTT
TTGATTTGTTTTTTTGCTTGGCCATGAAGCCCAATCCGATTTCTACAAGT
TAGACCAAAAATGATGATTTCTAACTCAAACTGGGTATTACAAGAGGGCT
TCGTCCTCCTACATAGACCATGTCTGATATATACGACATTGGCACTTAAA
GGGTTAAAAAAGGGCTCTTTTTCGTTATTTGTTTGATGGTATTTGTAGTC
AATCAGTGATTGATCTTTCGATTGAATAATAAATCAATATTCAAAAGTTT
TTCACATTAATGATGTTCTAAGATCTAAGAATCACTCGTGTGAAAATGAT
AATCATAGCACAATTATTGAAGAAGTTGATTTTCTTCTTCTTCATTTTCA
ATCTTTATTTTCCGATCTTTTTTGAGTTTTTTCTTTATGATAATATTCCA
CTCCTGTTTGTCGTTTCAACAAACACAACACCACTATATAATCAGGGGGG
GGGTCGGTAGTAAAATCTCAGACATAATGACGTTTACTACGGTGGTGGTG
TGACGAAAAATCGAAAAAAACTTTTANTTTTCCCCCCCCCCCCCCCCCCC
CTGATATAATTCAAATTCTATCAACAGTTATAGCCATTTTTGTCTCCCCT
GCAAATTATATTGAGACAGACTTTAGTTTTAGTTTTTAAACAATTACCCT
CAATTCAAATCGAGCACATATCATTTTCACATCACTCAGATAAGGATAAA
GCTATTGTTCATTTCTGCCGAAAAATTGTCAAAGTTAATGAGCTATATTT
CTCGTTCGTTAGTTCTCGGTTTGAGTAAACCTTATCGGAGAATAATTCGA
TTGCCTAATAATTCTTTTTCTAGCTGCATGGTTTTCAACGTTTTCTCGTT
CTCAGATTCCAGTTGTTGAATCTTAAATTCCATTTTGAGTTTCTCANTAA
ATACTAAAATGGGTGGTATCTATGTGTTAAATGTTGAAAAAATTTTACTA
CCTGGGTAGTTAAACTGGTAAAATTAGCAAATTTTAGCTCTATTATTGTA
ATTCTCTCAATTTTTTGGATGACTTTTCCGAAAAAATATCTGAAGATTTT
TATAATTTGAAAAAATTTTCTGTTGGAAAGTTGTTTGCTGCAAACAAAAA
ATCCTCGAAATTTTTTGTCAATATGNCATTTTGAGTTTTTCGATCTCTTT
TTGATGTTCTTTTTTGAGCTTTGTAATTTGCTGATCGTCAGCAACTTTGT
GCACATTCCTCCCACTAGCACTAACACTTTTTTTGCGATCTCGCCTTCCT
AAAGAAAAGTCGGATCTTCTCAATACAGTAAAAGGTAGGACACAAAATAT
TCGAGACAAGAAACAAGCCATAATGAATGATTCAATAAAATTTCTTTCTT
TTGTAAAATTTTTTTCCATAATGTATNTAAAGAAAAGTCGGATCTTTCTC
AATACAGTATAAGGTAGGACACAAAATATTCGAGACAAGAAACAAGCTAT
AATGAATGATCCAATAATATTTCTTCCTTTTGGAAAAGTTTTTCCATACT
GTACTTAAATCTAAAGATACTAAAATTTTCGTATAAAGTGCACCCACTAT
TATAAGAAGTGGTATTTAAAAAAAAAACTTAAAGAAAAATGAAATTGCTA
GTTTTAGTAATAAAATGTAGTAAGATTTCTCGTGTCTTCCTTTTTATACA
ACCATTTTGGTATTTTAGTACCAAATGACACCAAAACACCCCTGTCTCAC
AGCCCCAAGGGAGCCTCTTTCCAGAGTGGGAATGAAGATTTCTATCGAAA
TGCCAATGGGGATAGAAGTTCTTTTGTCCTCAGGTTCACAAAACTGTGGG
AAAGGTTTTGTAGTGCAATTGCTTTCTTTTCGAGTGAAGCTGGGGTTCCG
TATACAAACACGTCACTAAAAAGGGTCATGACTTGGCTGGCACAGAATGT
CACAATAACGTCCATCTGACATCCCTAACGTCCATTAAACGTTAAATGTA
CGTTAAAAGAACGTTTTGTGCCAGCTGGTACTGATCCGACCTGATTAAAT
TCTGCTCTCAAAAATGAACTTACAAAATTGTAAAACAATCAAAGCCTAGA
CTCTCTGATTAAAATGTTTTATTCGTTACAATCTTTGGTATATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012191TCONS_00012191Clytia hemisphaericatranscript
TCONS_00012190TCONS_00012190Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000141supercontigsc0000141:95153..98996 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23	0.22	0	0.63	1.69	2.55	5.57	6.91	2.88	2.38	2.31	1.52	3.3	3.39	4.39	3.2	3.94	3.06	3.64	4.19	1.88	3.34	2.09	1.55	4.16	5.83	1.48	1.34	1.77	1.55