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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012175 ID=TCONS_00012175|Name=TCONS_00012175|organism=Clytia hemisphaerica|type=transcript|length=4163bp
CTCGTACCTAGTCTCTTGTTTTGGACGCGGCCAGAAgaaatccgccattt
tggaaGGCGGAATTTACTCATTTTATCAACAGTAGAAAAAGCTTGGAAAA
GTATtaagatttcactgaaaaagaaaatattgtacTGGTCAGAGTTCATA
ATTTATTGTTATTCTGGAGAAAGTATATGCTAGTGTTATGGTTTTTAGTT
TGATTTTACTATGAATGGGTTGTCAGTATCTGAGTTATGTTGTCTTTTTT
GTTGCCCTCCTTTCCCATCTGTGATCGCCTCAAAGTTAGCGTTTTTACCA
CCTGAGCCAACTTACACTACACAGGAACTTGGAGATGGTACCTGGGCATT
ACATTTGAGTGAGAGAGCAGAGTGGCAATATGGACAAAAAGAACTTGACT
GTATCGAAGTGTTCCAAGCTCGTACAAACAGAGGAAATAGGATTTCGTGC
ATGTATGTCAGATGCTCACCAACAGCAAAATTTACTATATTATTCAGTCA
TGGTAATGCTGTTGACTTAGGACAAATGAGTAGCTTTTATATAGGACTTG
GAACAAGGATAAACTGTAACATCTTTTCATATGATTATTCTGGTTATGGA
CAAAGTTCAGGGAAAccaacagaaaaaaatatttatgcaGACATTGATGC
TGCCTGGAACTCTTTACGTACACGATATGGTGTAACACCTGAAAATATTA
TTGTTTACGGTCAAAGTATTGGAACTGTCCCAACAGTTGATTTGGCAGCT
CGTTTTGAATGTGCTGGTGTTATTTTACATTCTCCCTTGATGTCAGGAAT
GCGTGTTGCATTTCCAGAGACAAAAAAGACTTATTGTTTTGATGTATTCC
CTAGCATTGAGAAGATGTCGACCATCACACGAACACCCGTTCTTGTCATC
CACGGAACTGAAGATGAAGTTATTGACTTTTCGCACGGACTCGCCATCTA
CGAGAAAGCGCCCAAAGCTGTCGAACCGTTATGGGTGGAGGGTGCAGGTC
ACAATGATGTTGAACTTTATTCACAATATTTAGAACGCTTGAAACAGTTT
GTGCAGTATGATCTTGTGAAGGAATAAAAGACTGGAAAGCTTATGGCGTA
CGCCCATGTACGCCCAAGTATCCGCCCAATGCATTTTGTGCTTGATATGA
TTATCATACAAAATGCATAGACGTTGGATACATGACGGGCCTAAAAACAT
CCATAATATTTATTTGCACCAGTTCATAATTAAAGCAATATACCTTTTTT
TAGTTCtctcttttgtttgttttaaaaaggcttctataaataaattcttt
caaatttttgcacCTTTTtacattaattttatttttcaattctgggctta
aattattttcaaatatttttccataAAGTGGAAACTATCTGTGACCTTTG
AAATTGCGAGGTTTGTANAAAATATTTTTCCATAAAGTGGAAAGTCTCTG
TGACCTTTGAAATTGCGAGGTTTATATTCTGCAGATGTAGATTAGTGTTA
TGGTCCtaattcgtgatattcatgatgtaatgttttgtaCGAAAGCATCC
CGAAAAACCGGGTGTTTGCCACTAGTTTTaaattcaaacaataaaactGT
TGGCTAACGCCAATGATATTTTAGGCTCTTTCGcctaaaacattacgtca
tgaatatgaTGAATTAACTAATTTTCTCatatctttcttttgtttttcga
agCATTCCAAAAAGTTCTGAACTTTTTTTGGAAGGTTCTATAATTTCAGT
GACTTATTTTGAACGACTCTTTGTTCCAAATTTTCTTAAGCTCCAAGAAA
CGGCTTTTGAATTTCAATCCACACGAAATTACCTGAAACCAAAATAGCGG
TTTTCTTTTCGGGACCAACCGAAAGTTATTATTGTTTGGAATTGTTCGCC
GCGAAAGTTAAGGATATCACCGAGTTAATGtatctgtgtttttctgcgat
gGAGACGGTTAGTATCTAATTCGCTAGATCCTGGCTGACCGAGGACAGCA
CTTTTACTATACTCGATTTAGCAGGTCAGAAATGCGGCTTGttccaaatc
gtttcagtcactctaccgtcctcaaaagtgcaaatacatgaACTCGCTAT
TAAGTTGGGTTAGGGTGGACACCGTGTTGACCCAACTCGCACCAAGCCAC
TCAATCATTTAAATTCTGTATTTATGTATTNAAACCAAGTCCCATCAAGC
CACTCAATCATTTAAATTCTGTATTTATGTATTAATtaattttgaagata
tttttttgaGACCACTCACTCCCACTCTaaagtttataattattatCTAC
CACTACTACGAGTACTACCTACTTATATATCatatagatgaaatattttg
tcaGTTTTTATTTCTTGAATATCAATTAATTATCATATTATGTTTACGTA
TAAAATATGCTCGTTTTCTTCTTATTTCTCTGCCTGGGATCatattcatt
ataaaaaaccccggtctggcaatgtattgttttagctttttgttaaattt
tcttttgttacaaacataCAAAAGACAAGTTTCTACAAGTTATGTTTCTT
GGATCACAACTTAACCCGAATTTTTGAACGCCTACCCTTCTCTGAAATTT
CTCTGTTCTGGAAATTTGTTTCGGTGAATcgtattctttaaaaaaaactg
gtGCTGCACCAATCtggtccccgtgtatcccaggctttatttacgttact
tatggccgccagagaatattatctatctagcgctatcagtaaacatcaaa
aagctgataatacacagggaacgaggttggcacTGCACCCCAAATTTATG
TTTTCTTTGCAACTGCACAAATTTGTTAAGACTAATTCTCCTTCTTTTTT
CGAGTAAAGAGAAACAGAAGGCGTAACGTTCACTCAGCATATTCTGTAAA
ATGTACCACCCAAAAGCACAGAAACGGGGGTAACTCTTGGACAGGAATTT
CTTACAAAATACATAtcctttcaaaaacaatttcggggatgcgcgcagcc
tagaatagatcttatcggagttcttgatttttctaagaaagcgatgcatt
gtgggattgtttcgggagtattataatagaattccctcgagtaATTCCTA
TCCCACAAtccatcgcttttttagaaaaatcaaaaactccgataagatct
attctcGCTGAAGAGAAATTTATGTCTATGAAGTtctttgtttaaaacaa
aactGCTTTCTCGATTTTTTGACCAGGAtaaaaatttggggaaaatatTT
GTGATCCACTGTTAAAATGATACGCACAAAGACACTAATCCCACATTCTA
CTACNttccttataattggttgttttttcatccaaaaacattattaacag
caatgcccaccatcaagcaattttcaataaaatcgatttttgaagctgga
actattcaaaaatcgccggaacacaattttggtcggggaaaagtgacgaa
aatgcccctaggtgacgaaatttttcaccgacgaaaaaaaaccccgTATA
AacaaaactccgacatttttttccccgataaggtattcgatACGCTACAT
TATTCGGCGATATTGAAAGGCgatgtcaacaagaaactcttgtAAATGAC
ACTACTATTCAAtgaaatccaattccccttgaaaatctaATTAGAGAGCG
TCATGGTCAACTGTATTTGCATCGGAAATGGCTTTTTAGCCAAAGTCCtt
gaaatgttaaaaaaaagccTCCGAAAACTATATTCCATTAACTTGGTTCA
AAGCAACATCAACTATTAATTTTCACACGTCATATGCATCAACACCATTT
TCCACAATATTAATAGTATataaattaagaaaatcaaaaacgaGATATCT
TCAATTTTGTAATATCTCGAAATATCGAAATCCTTTAGGCTGTGGAAGAG
TAGAAACATGCGTCTCGTTTGTGATAACGTATCCCAAATGAGGTACGTCC
TCCTTTGTCACATTGTTCAAGATACACAGCGATTGTTTTTTTGATATGCT
GAAAGATCGGCATTCACTCATTGCAATGCAGTTATCGAAGCATTGCTCGG
ATTCCGGCACTTTTATGGTTTGTAGAATTCCGTAACTTAAATACATTTCG
ACGTTGTCTGCGTTATTGACGGCAACCGGGACTCCCTGCGTCAGTAGAAC
GCAAAACACCAAA Run BLAST on NCBI protein sequence of TCONS_00012175-protein >TCONS_00012175-protein ID=TCONS_00012175-protein|Name=TCONS_00012175-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MNGLSVSELCCLFCCPPFPSVIASKLAFLPPEPTYTTQELGDGTWALHLS
ERAEWQYGQKELDCIEVFQARTNRGNRISCMYVRCSPTAKFTILFSHGNA
VDLGQMSSFYIGLGTRINCNIFSYDYSGYGQSSGKPTEKNIYADIDAAWN
SLRTRYGVTPENIIVYGQSIGTVPTVDLAARFECAGVILHSPLMSGMRVA
FPETKKTYCFDVFPSIEKMSTITRTPVLVIHGTEDEVIDFSHGLAIYEKA
PKAVEPLWVEGAGHNDVELYSQYLERLKQFVQYDLVKE Run BLAST on NCBI transcript from alignment at sc0000141:455380..467717+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012175 ID=TCONS_00012175|Name=TCONS_00012175|organism=Clytia hemisphaerica|type=transcript|length=12338bp|location=Sequence derived from alignment at sc0000141:455380..467717+ (Clytia hemisphaerica)
CTCGTACCTAGTCTCTTGTTTTGGACGCGGCCAGAAgaaatccgccattt
tggaaGGCGGAATTTACTCATTTTATCAACAGTAGAAAAAGCTTGGAAAA
GTATtaagatttcactgaaaaagaaaatattgtacTGGTCAGAGTTCATA
ATTTATTGTTATTCTGGAGAAAGTATATGCTAGTGTTATGGTTTTTAGTT
TGATTTTACTATGAATGGGTTGTCAGTATCTGAGTTATGTTGTCTTTTTT
GTTGCCCTCCTTTCCCATCTGTGATCGCCTCAAAGTTAGCGTTTTTACCA
CCTGAGCCAACTTACACTACACAGGAACTTGGAGATGGTACCTGGGCATT
ACATTTGAGTGAGAGAGCAGAGTGGCAATATGGACAAAAAGAACTTGACT
GTATCGAAGTGTTCCAAGCTCGTACAAACAGAGGAAATAGGATTTCGTGC
ATGTATGTCAGATGCTCACCAACAGCAAAATTTACTATATTATTCAGTCA
TGGTAATGCTGTTGACTTAGGACAAATGAGTAGCTTTTATATAGGACTTG
GAACAAGGATAAACTGTAACATCTTTTCATATGATTATTCTGGTTATGGA
CAAAGTTCAGGGAAAccaacagaaaaaaatatttatgcaGACATTGATGC
TGCCTGGAACTCTTTACGTACACGATATGGTGTAACACCTGAAAATATTA
TTGTTTACGGTCAAAGTATTGGAACTGTCCCAACAGTTGATTTGGCAGCT
CGTTTTGAATGTGCTGGTGTTATTTTACATTCTCCCTTGATGTCAGGAAT
GCGTGTTGCATTTCCAGAGACAAAAAAGACTTATTGTTTTGATGTATTCC
CTAGGTGAGTAAAATTTCATTTGGGGTAACATAGAATTTTTGAATGACAC
TTTTTGAATGACACAATGTCATACTGTTtgtgaataattaaaaactctag
cATCACAACAATGATACACATAAGCATAATTAGTAAACATGTGTACTATA
TCTTCTTTTATccttgttttgatgctggagtcAGTAGAATCTTTATATTC
TTTACATGACGTTGCATCCTGCAAAAGCTCTGTTATCCCACATCAGACAG
ATCAATCATAGATTCTGCAAAATGTTAAATTCAGTgacataccgtgagtg
gtcctactGTAAATCCGAACGCCCTGCccaaatccgaccccccaaataac
actgctatgaaaaaaattatatgtttACAAACCtgtacaaacattccctc
tccaagttgaacaataaactattgcaagagctCTTGAAATAAAACACTTA
ACAAGATTACTATCTATAATGCCAAGATGTCAATtaaatgtgatcaaaaa
agtgtgagttgtaaaaataattacctctaattattctgaatctgttattc
gtgtttaaaacgttaacaattttgtaataagaaattatgttttgtatgaa
aagcaattattgttatttggttcaattggttcagtgcatcaaatctctca
gtttagttgacactttggtatcttcattgcgtcacagcaaaagatttgtt
tttattttagtttgtatctttgaaagaccccatcggatttaggcagggct
gtcggatttaggacaaCTCACGGTACGAGGCAattactttcttttaaaaa
gtaccATAGATTTGCCTGGTGTAATGACTTCCTTGCATATAATGAGTGGC
TGTTGTGTTTTTCGCTGTGAACTCTTAAacacagttagtcacactagcat
cCCGcagaaatgcgtatcaaagattaatgctgagAAATcgctaccgtgag
atcgggcaACCTTGCATCAGTGggggctaacatgcatagccctcaaatga
aagacttggctggtcattaaaatacaaagtcaaatcaaaacaaaaatggt
agagtagagctgcgagcggagctgcgtagttgtattttaatgaccagaca
ggtcattcatttgagggctatgcatgtatgCATCACggtatatcgtttac
ttgactcgcaagcaaaaaaatgcgtaGCAAAACTTCTAAacagattcatg
aaaaaataacccagcgctttttactgaaattaatattttcaaaaactacg
agaaattgcttaaaatttgagccatggatgaaaaagtttgagccaagcca
accttgaaaactaatttgaagatcaacctCCCAAGAaattgttgcaaata
catcctgtagatgactggtgctgattttttctgaaagcttgattttctag
tgtgactaactgaaagATGTTTGttaccgtcgttttgtataaaATTCCGA
TTTCCatactaagattcctttgccacttaTCTAGTAGAAAAACGACCAGG
ACTGTGGGTTGCTCAAAAAAATAAGCTTCGAAAAGATAGGCAGTTTcgtg
agtaaacacaagatGTCCCCTTAGAAACAAACTCTTTCCAATCTCATGCG
GATTATCCCGGGAAAAATAGTGGGAAGATTCCAGAAAAATGACAGTCAGT
ATAGCCCTAACTGTTCATATAAAAGTTTTGGGAAATgtatatttggactt
tgtacccaatgctgcacgcaagcacttaagctaaagtccaGCAAGAGCAG
GACAAATatcagttttttaaagtttgcaaaaaacgccatatagaagatct
ttcaaattcagtatttgAATAGCAGTAAAAATtacaacttttgtattttt
cctttttttttgcaaaagttccagaaaggaaaataaagggataatgatga
ttgaatactacccaccagtggcgtggtggcagggggggctGGCCCCAAcg
gagcccttttgagaagggggcacccaaaaataagggacgccaagaaggat
ttttcaggcgcccatatcgaaagattgacaaatgaaaaaacaaaaatggc
gcccctcatcacctcagaaactcgaaattttctgactcgcttcgctcgca
cactgccttttttgtgttcataatgagcgtatagagaggggcgccaaaaa
caaaaaatctttaaaaagggcgccatatttgccttgaCCACCTCatagaa
attttcccaccacgccactgctaCCCACTGATGATTCGCGGCACTTccat
aaagctagaatcgctttccgtctcttcgcttgagaaaatgttAGACAGAT
TAAAGTtcttcacccgcgcaggagctcACGAGCTTTCTGATTGTAGACTT
AGCTGCGGCAGATCATTTCCATGGAAGtttttggaatgtttacaaggctc
ttgacagaaaatcgtttgtttgattgtcaatgatgacagtgctattatta
attttgttagatctgacaaattgatgtttgtaagtgcacttcatagtttt
gattcccattgaaaaatcatattctggttttcatgttataaGATGctatt
ttagagctttagagctagcctgacaGTAATCTTAATGCAAAAATGGGATT
AAGGACAGTACAAAACTATGTCCATAATCACATTGTTTGTATTGACCTTT
TCCTAGACCTGATGTCATGATGGATAATTAAAAACTAGCATAAATCACGA
TAACTCTACATTTCAATGGATGCAAGgcaaacaacaacaataatccCTTG
CATTtattagtcaggtagaattgcatATCATAACTACCCAGAaaaaaatg
gtgtagagatggaattttgcacagaggtccaggaacatgtcaggaatcac
caaaaaagCCCCATCCCCAGAAAGATGGGAAAACCCTCAAATCCATAGTG
GCGgacatggtacttttttctacaattaatcaaggggggacccttggtaa
ctgatttttaatggttttcaaatgtcaaaaataactagacAGAAAGATTC
CTCTCCATGAGTAGATAAacgataaagaaaatggggtcacttttgaaatt
tggaccacaTGGTCCCGAGATATGACCTCTCAagtccaaaaattgatgac
TTTAATGACGCCAGAATTTTTACTGAGAGCGATAATTTGGAACATCGACA
AGCTTACCATGTAGCCCTGATTAtgggctttcagaaaaatatatggttta
atatgtttagatcagccgttggcgagatataacgattttaaaattgttta
aaatgcttatttttgCTAAGTCagcactttttgattttaaaatcgtTATA
TCTTGCCAACGGTTGGTTTAAACATactaaaccatatattttttcgaaag
cCTATGATCAGGGCTAAATGATTAGCTCATCAACGTTCCAATTTATCCAT
CTTagtaaaaatgctgacatcaaaATCGTCAATTTTTGGACTTTAGAGAT
CATATCTCGGGACCACATggtccaaatttaaaaaatgaccccattttctt
tatctactcatGGAGAGGAATCTCCCTgtcagttatttttaaaaatcatc
cCCCCTTAattaattgtagaaaaaagtaccatgtccgccattatgaattt
gAGGGTGTACTCGTCTTCCTGGGGGTGGggcttttttttttggtaattcc
TGGTATGTTCCTGgacctctgtgcaaaattttatctctacaccatttttg
tcccGGCTTTGGCGGTTTATGatctaattctacctgactatatTTAAACG
TGGAGTTATCACAATTTATAAAAGAGTTTTTAACTATCCATCATGACATT
GCATCTAGCAAAATATCTATTGTTATGCATACCATCACGACAAGGGGgtt
tatttcaattattttaattccaaaattgattttaaaggtGCCTAAGTCCT
GTGAACTTTATTTTAAAGGAGCCTTAGTCTGTTTTTTGAGATCATACAAT
TAAAGATATATCTTCAATTAGacttaagagccagttttttttaATGGGGC
ACTTTGGGGTAAATGCAATAGTTTCAAActtagatttttcatttttggat
atgtttttAAGTACAAATAACTGAGTAAAATCACATAATATTTTGGTCTC
TGCAAATCCATAATATCagatttatgccaatttgaacaTTTTTGGACATT
GCacataaaaagatttttgatatagaaccatgctttctcaaatcaaaatg
aggaattggtttttggtgattctgaaactatggcagggaaacaatataat
tttcaaaaaaaatcataattttcaaaatgaatggTAGTTGGAGTTATGAC
GCCAGTCACAAAAACGTTACAAATTGATTTTAGGAGTATTTTATTAGAGC
CACCTAACCTGTCAGAGGGTAGTTTGtccctgctcaaaataataatttct
gaTAGTTCAGTCCCTGGTGTATCCATTTGAAATGATTGCAGTAAAAAATT
CCGGCCCTACTGGCCACTAGAGGCCCGAAACGCCAATTCGGTCtaaaaaa
gtaccaactttagtccaatttttcctagaaatcccaacattgtctgGCCT
CCAACTCTTCTGTTCATGAAAGACGACCGCCTGGTCTATCAGGATCAAAA
TTgatcttgatttaaaaaaaatttttaacactgctcgaaaaataactaaa
atttgggatattttggCTCATTGGAAAACTTCaaaggggtctaggtcact
gaatttgttGTAATATAAGGGCTTTGATGAATCTTTCATATCAAAACcat
gaaactaggtgaaaaaagttgtcaaaggTGTTTTTTGGGCCGAAAAGgct
tttttcaattctttggactagagctgaggtcattctattgcaTCCAATAA
TTTGTACAGGAAAACCAATTATGGTATTCTTTGATAACTTATAATTATTA
TATATAACTGAAATTTCGCCCAAAGGCGGCTTCTAACTCCCCTGACCCCC
TTGATTTTGTAAAATCGACTTAAAAGGatatttttggctgaaatttttgc
cgAAAATGAGTACCCATCGATACTTGATTTTGGGAAAGCACCCTATAGAA
TGTGCAATAATTTATCTGGAGTTGAACCTCTTtcctttcttttaaagatt
aggCCTCGGtcaaagtccttcttaactctAATGTTTGACAGTGTTCctca
aaaaaacaatatttgCTCAGTTTTGAGTCTTTTAAGTCAATGGAATCTTT
GTTTTTGGAAAGCCAAATACGcgccaaaaaaaatattttctgtgtACAAA
AATTAGAACATTTAAAGGTAGTCTAGTCCTGATATATCgaatattttggt
caaagaGAAAAAAGTCGATGAAAATTGTCCAATTTCATAgaaaattttgt
agaaatgtACTCTTAGGTCtgcttaggttccaaataaacgcccccgcccc
cttgttaatttttcgaaaactttccaAGTGAAAGCAGTACATCGCATGGC
AGAAGTGAAGCTTTTGAATCTAAAAACAGAGTGGACTACACGTTTATTTA
TAACATACAAAATTTTAGAAGTcatcggatgttcttaactttttgagctg
taaagacaaaaatcattaaaaattattctttcaatgttcacaattttgtg
agtatttttgtccatttccctaCGAGATCTTGTGTTTTAGGgtcggcaaa
gccttaaaatttacTTACATAGTTNgggtatttttgtccatttctcTACG
AGATCTTGTGTTTTAGGGTCGGCAAAGCCCTAAAATTTACTTACATAGTT
TGCTCTTGCAAAACAAGGGCACGCTACTAGACCCTCTTCTTTTCATCCTA
GGGTGTTGTGATTCGTATATATCAGGCATCAGATAAAATCAGATTAGCAC
TTGTAACTACGAGGGGGGCATGGCTAAAGTAAAACTTAAACATTACACAG
ACCACATGTCATGAAACGAATCAATAAAAATCACGTGCAAGAAAACATAT
TTATTAAACAATGTAAACAAGACCTTTTACGTCACGAGCAATTCTAACAT
CGTTTTCAAAACCTTGCTATGGTAATTAATTCCCAAAGGCAGAGGAGTTC
TTAAGAAGTTGACTGCTTTATTTATAAAAGTAACATTTGAAGACTTTGAT
CAGCTTGGAAATGGTCTCAAAACGAGGCAGTAGTTACGCTcgaaataatt
tatgaaaaggactaTTTGCATGTTTTGACATACAGTGTGTCCTGAAAAAG
CAGACAAAactttatataaagtaaaatcattAAAACACATTATCTTAGCT
GGACATAGAAAGAAAGATTAAAATTTActgttcaatcaatagatattcaa
ttcccaagaagatttttgagattgaaatattaaGTATACATATCATAAAA
TCTCGCAtaaatgtttatatattttgtccactttttttgggacacactgt
atgaCATCTGTTATGGTTTTCATCGTGCTGGATacagtttttttgaattt
tgtaatTACTTTTAATCTcatatttttaattctttttttggacctacccc
ggtggggtggaggtcctataaattaacccgtgttcgttagttagttagtt
agttagttagttagttagttagttagttaNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcgtt
tcttaattgctttctccgttccaatagatatataaatcgaaatttaaaat
tatacattacttccattaaattataattattcgttttataaataggtagg
tccattaaagtattacttgtttttttCAGCATTGAGAAGATGTCGACCAT
CACACGAACACCCGTTCTTGTCATCCACGGAACTGAAGATGAAGTTATTG
ACTTTTCGCACGGACTCGCCATCTACGAGAAAGCGCCCAAAGCTGTCGAA
CCGTTATGGGTGGAGGGTGCAGGTCACAATGATGTTGAACTTTATTCACA
ATATTTAGAACGCTTGAAACAGTTTGTGCAGTATGATCTTGTGAAGGAAT
AAAAGACTGGAAAGCTTATGGCGTACGCCCATGTACGCCCAAGTATCCGC
CCAATGCATTTTGTGCTTGATATGATTATCATACAAAATGCATAGACGTT
GGATACATGACGGGCCTAAAAACATCCATAATATTTATTTGCACCAGTTC
ATAATTAAAGCAATATACCTTTTTTTAGTTCtctcttttgtttgttttaa
aaaggcttctataaataaattctttcaaatttttgcacCTTTTtacatta
attttatttttcaattctgggcttaaattattttcaaatatttttccata
AAGTGGAAACTATCTGTGACCTTTGAAATTGCGAGGTTTGTANAAAATAT
TTTTCCATAAAGTGGAAAGTCTCTGTGACCTTTGAAATTGCGAGGTTTAT
ATTCTGCAGATGTAGATTAGTGTTATGGTCCtaattcgtgatattcatga
tgtaatgttttgtaCGAAAGCATCCCGAAAAACCGGGTGTTTGCCACTAG
TTTTaaattcaaacaataaaactGTTGGCTAACGCCAATGATATTTTAGG
CTCTTTCGcctaaaacattacgtcatgaatatgaTGAATTAACTAATTTT
CTCatatctttcttttgtttttcgaagCATTCCAAAAAGTTCTGAACTTT
TTTTGGAAGGTTCTATAATTTCAGTGACTTATTTTGAACGACTCTTTGTT
CCAAATTTTCTTAAGCTCCAAGAAACGGCTTTTGAATTTCAATCCACACG
AAATTACCTGAAACCAAAATAGCGGTTTTCTTTTCGGGACCAACCGAAAG
TTATTATTGTTTGGAATTGTTCGCCGCGAAAGTTAAGGATATCACCGAGT
TAATGtatctgtgtttttctgcgatgGAGACGGTTAGTATCTAATTCGCT
AGATCCTGGCTGACCGAGGACAGCACTTTTACTATACTCGATTTAGCAGG
TCAGAAATGCGGCTTGttccaaatcgtttcagtcactctaccgtcctcaa
aagtgcaaatacatgaACTCGCTATTAAGTTGGGTTAGGGTGGACACCGT
GTTGACCCAACTCGCACCAAGCCACTCAATCATTTAAATTCTGTATTTAT
GTATTNAAACCAAGTCCCATCAAGCCACTCAATCATTTAAATTCTGTATT
TATGTATTAATtaattttgaagatatttttttgaGACCACTCACTCCCAC
TCTaaagtttataattattatCTACCACTACTACGAGTACTACCTACTTA
TATATCatatagatgaaatattttgtcaGTTTTTATTTCTTGAATATCAA
TTAATTATCATATTATGTTTACGTATAAAATATGCTCGTTTTCTTCTTAT
TTCTCTGCCTGGGATCatattcattataaaaaaccccggtctggcaatgt
attgttttagctttttgttaaattttcttttgttacaaacataCAAAAGA
CAAGTTTCTACAAGTTATGTTTCTTGGATCACAACTTAACCCGAATTTTT
GAACGCCTACCCTTCTCTGAAATTTCTCTGTTCTGGAAATTTGTTTCGGT
GAATcgtattctttaaaaaaaactggtGCTGCACCAATCtggtccccgtg
tatcccaggctttatttacgttacttatggccgccagagaatattatcta
tctagcgctatcagtaaacatcaaaaagctgataatacacagggaacgag
gttggcacTGCACCCCAAATTTATGTTTTCTTTGCAACTGCACAAATTTG
TTAAGACTAATTCTCCTTCTTTTTTCGAGTAAAGAGAAACAGAAGGCGTA
ACGTTCACTCAGCATATTCTGTAAAATGTACCACCCAAAAGCACAGAAAC
GGGGGTAACTCTTGGACAGGAATTTCTTACAAAATACATAtcctttcaaa
aacaatttcggggatgcgcgcagcctagaatagatcttatcggagttctt
gatttttctaagaaagcgatgcattgtgggattgtttcgggagtattata
atagaattccctcgagtaATTCCTATCCCACAAtccatcgcttttttaga
aaaatcaaaaactccgataagatctattctcGCTGAAGAGAAATTTATGT
CTATGAAGTtctttgtttaaaacaaaactGCTTTCTCGATTTTTTGACCA
GGAtaaaaatttggggaaaatatTTGTGATCCACTGTTAAAATGATACGC
ACAAAGACACTAATCCCACATTCTACTACNttccttataattggttgttt
tttcatccaaaaacattattaacagcaatgcccaccatcaagcaattttc
aataaaatcgatttttgaagctggaactattcaaaaatcgccggaacaca
attttggtcggggaaaagtgacgaaaatgcccctaggtgacgaaattttt
caccgacgaaaaaaaaccccgTATAAacaaaactccgacatttttttccc
cgataaggtattcgatACGCTACATTATTCGGCGATATTGAAAGGCgatg
tcaacaagaaactcttgtAAATGACACTACTATTCAAtgaaatccaattc
cccttgaaaatctaATTAGAGAGCGTCATGGTCAACTGTATTTGCATCGG
AAATGGCTTTTTAGCCAAAGTCCttgaaatgttaaaaaaaagccTCCGAA
AACTATATTCCATTAACTTGGTTCAAAGCAACATCAACTATTAATTTTCA
CACGTCATATGCATCAACACCATTTTCCACAATATTAATAGTATataaat
taagaaaatcaaaaacgaGATATCTTCAATTTTGTAATATCTCGAAATAT
CGAAATCCTTTAGGCTGTGGAAGAGTAGAAACATGCGTCTCGTTTGTGAT
AACGTATCCCAAATGAGGTACGTCCTCCTTTGTCACATTGTTCAAGATAC
ACAGCGATTGTTTTTTTGATATGCTGAAAGATCGGCATTCACTCATTGCA
ATGCAGTTATCGAAGCATTGCTCGGATTCCGGCACTTTTATGGTTTGTAG
AATTCCGTAACTTAAATACATTTCGACGTTGTCTGCGTTATTGACGGCAA
CCGGGACTCCCTGCGTCAGTAGAACGCAAAACACCAAA Coding sequence (CDS) from alignment at sc0000141:455380..467717+ >TCONS_00012175 ID=TCONS_00012175|Name=TCONS_00012175|organism=Clytia hemisphaerica|type=CDS|length=1734bp|location=Sequence derived from alignment at sc0000141:455380..467717+ (Clytia hemisphaerica)
ATGAATGGGTTGTCAGTATCTGAGTTATGTTGTCTTTTTTGTTGCCCTCC
TTTCCCATCTGTGATCGCCTCAAAGTTAGCGTTTTTACCACCTGAGCCAA
CTTACACTACACAGGAACTTGGAGATGGTACCTGGGCATTACATTTGAGT
GAGAGAGCAGAGTGGCAATATGGACAAAAAGAACTTGACTGTATCGAAGT
GTTCCAAGCTCGTACAAACAGAGGAAATAGGATTTCGTGCATGTATGTCA
GATGCTCACCAACAGCAAAATTTACTATATTATTCAGTCATGGTAATGCT
GTTGACTTAGGACAAATGAGTAGCTTTTATATAGGACTTGGAACAAGGAT
AAACTGTAACATCTTTTCATATGATTATTCTGGTTATGGACAAAGTTCAG
GGAAAccaacagaaaaaaatatttatgcaGACATTGATGCTGCCTGGAAC
TCTTTACGTACACGATATGGTGTAACACCTGAAAATATTATTGTTTACGG
TCAAAGTATTGGAACTGTCCCAACAGTTGATTTGGCAGCTCGTTTTGAAT
GTGCTGGTGTTATTTTACATTCTCCCTTGATGTCAGGAATGCGTGTTGCA
TTTCCAGAGACAAAAAAGACTTATTGTTTTGATGTATTCCCTAGCATTGA
GAAGATGTCGACCATCACACGAACACCCGTTCTTGTCATCCACGGAACTG
AAGATGAAGTTATTGACTTTTCGCACGGACTCGCCATCTACGAGAAAGCG
CCCAAAGCTGTCGAACCGTTATGGGTGGAGGGTGCAGGTCACAATGATGT
TGAACTTTATTCACAATATTTAGAACGCTTGAAACAGTTTGTGCAGTATG
ATCTTGTGAAGGAATAAATGAATGGGTTGTCAGTATCTGAGTTATGTTGT
CTTTTTTGTTGCCCTCCTTTCCCATCTGTGATCGCCTCAAAGTTAGCGTT
TTTACCACCTGAGCCAACTTACACTACACAGGAACTTGGAGATGGTACCT
GGGCATTACATTTGAGTGAGAGAGCAGAGTGGCAATATGGACAAAAAGAA
CTTGACTGTATCGAAGTGTTCCAAGCTCGTACAAACAGAGGAAATAGGAT
TTCGTGCATGTATGTCAGATGCTCACCAACAGCAAAATTTACTATATTAT
TCAGTCATGGTAATGCTGTTGACTTAGGACAAATGAGTAGCTTTTATATA
GGACTTGGAACAAGGATAAACTGTAACATCTTTTCATATGATTATTCTGG
TTATGGACAAAGTTCAGGGAAAccaacagaaaaaaatatttatgcaGACA
TTGATGCTGCCTGGAACTCTTTACGTACACGATATGGTGTAACACCTGAA
AATATTATTGTTTACGGTCAAAGTATTGGAACTGTCCCAACAGTTGATTT
GGCAGCTCGTTTTGAATGTGCTGGTGTTATTTTACATTCTCCCTTGATGT
CAGGAATGCGTGTTGCATTTCCAGAGACAAAAAAGACTTATTGTTTTGAT
GTATTCCCTAGCATTGAGAAGATGTCGACCATCACACGAACACCCGTTCT
TGTCATCCACGGAACTGAAGATGAAGTTATTGACTTTTCGCACGGACTCG
CCATCTACGAGAAAGCGCCCAAAGCTGTCGAACCGTTATGGGTGGAGGGT
GCAGGTCACAATGATGTTGAACTTTATTCACAATATTTAGAACGCTTGAA
ACAGTTTGTGCAGTATGATCTTGTGAAGGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012175-exon-sc0000141-1491911889:455380..456233 | TCONS_00012175-exon-sc0000141-1491911889:455380..456233 | Clytia hemisphaerica | exon |
| TCONS_00012175-exon-sc0000141-1510915933:455380..456233 | TCONS_00012175-exon-sc0000141-1510915933:455380..456233 | Clytia hemisphaerica | exon |
| TCONS_00012175-exon-sc0000141-1575043694:455380..456233 | TCONS_00012175-exon-sc0000141-1575043694:455380..456233 | Clytia hemisphaerica | exon |
| TCONS_00012175-exon-sc0000141-1491911889:464409..467717 | TCONS_00012175-exon-sc0000141-1491911889:464409..467717 | Clytia hemisphaerica | exon |
| TCONS_00012175-exon-sc0000141-1510915933:464409..467717 | TCONS_00012175-exon-sc0000141-1510915933:464409..467717 | Clytia hemisphaerica | exon |
| TCONS_00012175-exon-sc0000141-1575043694:464409..467717 | TCONS_00012175-exon-sc0000141-1575043694:464409..467717 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000141 | supercontig | sc0000141:455380..467717 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00012175 vs. Swiss-Prot (Human)
Match: AB17B (Protein ABHD17B OS=Homo sapiens GN=ABHD17B PE=1 SV=1) HSP 1 Score: 420.239 bits (1079), Expect = 3.515e-135 Identity = 221/288 (76.74%), Postives = 251/288 (87.15%), Query Frame = 1
Query: 211 MNGLSVSEXXXXXXXXXXXSVIASKLAFLPPEPTYTTQELGDGT-WALHLSERAEWQYGQKELDCIEVFQARTNRGNRISCMYVRCSPTAKFTILFSHGNAVDLGQMSSFYIGLGTRINCNIFXXXXXXXXXXXXKPTEKNIYADIDAAWNSLRTRYGVTPENIIVYGQSIGTVPTVDLAARFECAGVILHSPLMSGMRVAFPETKKTYCFDVFPSIEKMSTITRTPVLVIHGTEDEVIDFSHGLAIYEKAPKAVEPLWVEGAGHNDVELYSQYLERLKQFVQYDLVK 1071
MN LS SELCCLFCCPP P IASKLAFLPP+PTYT G+ W LHLSERA+WQY +E D IE F RT++GNRI+CM+VRCSP AK+T+LFSHGNAVDLGQMSSFYIGLG+RINCNIFSYDYSGYG SSGKPTEKN+YADI+AAW +LRTRYG+ PEN+I+YGQSIGTVP+VDLAAR+E A VILHSPL SGMRVAFP+TKKTYCFD FP+I+K+S IT +PVL+IHGTEDEVIDFSHGLA++E+ + VEPLWVEGAGHNDVELY QYLERLKQFV +LV
Sbjct: 1 MNNLSFSELCCLFCCPPCPGKIASKLAFLPPDPTYTLMCDESGSRWTLHLSERADWQYSSREKDAIECFMTRTSKGNRIACMFVRCSPNAKYTLLFSHGNAVDLGQMSSFYIGLGSRINCNIFSYDYSGYGASSGKPTEKNLYADIEAAWLALRTRYGIRPENVIIYGQSIGTVPSVDLAARYESAAVILHSPLTSGMRVAFPDTKKTYCFDAFPNIDKISKIT-SPVLIIHGTEDEVIDFSHGLALFERCQRPVEPLWVEGAGHNDVELYGQYLERLKQFVSQELVN 287
The following BLAST results are available for this feature:
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