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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012167 ID=TCONS_00012167|Name=TCONS_00012167|organism=Clytia hemisphaerica|type=transcript|length=1083bp
CTTGACGGGGACAAGGAATTAGCTCGAATTATAGAACCTCTTCTTACTGA
TGTTTCAAACAACATTATAAGGATTTCCCGTCAGAGTCCTTTCTTAATAT
TGGTGCAAGACGGTGTTCGAAGTTCTGCTGTATCAGACGTAGATCTTTGT
CTCAGCGAAATATAAAAAGAGACTCTTCTGTCTCAAAATTCTTCATAACT
CACCAAAagcaaaacttttttctaagCTCCATCTCGCGCGAAATGATCAT
CTTTGACCACTGGCTTAATAGAGCGGAAtgtctttaactcgaacctcttt
aactcgaacctctataactcgaatgtctccttaactggaACAAGTCTTGT
AGCCCCTTCAGTCAACAATTCTTTATAggccttactccataactcgaaat
ttccttaactcgaacaaatttgcgttccccgtgcgtgttcgagttatgag
gATACCACTGtaatagcgcaccgcgctgaatctaaaaatagattttattt
ttgacaaaatcattactctcgatgtgtttgtacgagctccaatcccatca
acctttgcgttaatctcttttgcacgttaattgtatcatttgacaaaaga
tatataagaacttgcacgtatctttaattgagccgcattgaattgtggga
ttgcaactcgtacaaatgtcaaaaaaagtgaaaagaaattAGCGTTGCGG
AGCGTTATTAATATATCCTTCTTTTTAGTCAGTCACACTCCTGGACAACA
CAAAATGCACCATGAATGATTTGGGAACCCAATTCTTCCTCCGTGAAAGT
GATGTCGACAAACCAAGGTAAATTTGACAAATTAATTCCCCTTTATACTT
ACCATGGACCTATGATCTTTGATGTTGTTGATCTTGCAAATAAGTGAGGT
TGCAGCCATGTGGCAGTTAACGGTTACGCAAAGTCTTCTTAATTGTTTTG
CAAAGATGTCTCCACTTACACCCTTGAGCATAGAGTGATAAGGTACAATT
CCTAAGTGTTTAGTATAAGACCAATGTTACGCATTTTAGTCAAATGGTTT
ACCCTTATTTATTCGTAACTTGGTTTCGTCGAA Run BLAST on NCBI transcript from alignment at sc0000141:281377..282459+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012167 ID=TCONS_00012167|Name=TCONS_00012167|organism=Clytia hemisphaerica|type=transcript|length=1083bp|location=Sequence derived from alignment at sc0000141:281377..282459+ (Clytia hemisphaerica)
CTTGACGGGGACAAGGAATTAGCTCGAATTATAGAACCTCTTCTTACTGA
TGTTTCAAACAACATTATAAGGATTTCCCGTCAGAGTCCTTTCTTAATAT
TGGTGCAAGACGGTGTTCGAAGTTCTGCTGTATCAGACGTAGATCTTTGT
CTCAGCGAAATATAAAAAGAGACTCTTCTGTCTCAAAATTCTTCATAACT
CACCAAAagcaaaacttttttctaagCTCCATCTCGCGCGAAATGATCAT
CTTTGACCACTGGCTTAATAGAGCGGAAtgtctttaactcgaacctcttt
aactcgaacctctataactcgaatgtctccttaactggaACAAGTCTTGT
AGCCCCTTCAGTCAACAATTCTTTATAggccttactccataactcgaaat
ttccttaactcgaacaaatttgcgttccccgtgcgtgttcgagttatgag
gATACCACTGtaatagcgcaccgcgctgaatctaaaaatagattttattt
ttgacaaaatcattactctcgatgtgtttgtacgagctccaatcccatca
acctttgcgttaatctcttttgcacgttaattgtatcatttgacaaaaga
tatataagaacttgcacgtatctttaattgagccgcattgaattgtggga
ttgcaactcgtacaaatgtcaaaaaaagtgaaaagaaattAGCGTTGCGG
AGCGTTATTAATATATCCTTCTTTTTAGTCAGTCACACTCCTGGACAACA
CAAAATGCACCATGAATGATTTGGGAACCCAATTCTTCCTCCGTGAAAGT
GATGTCGACAAACCAAGGTAAATTTGACAAATTAATTCCCCTTTATACTT
ACCATGGACCTATGATCTTTGATGTTGTTGATCTTGCAAATAAGTGAGGT
TGCAGCCATGTGGCAGTTAACGGTTACGCAAAGTCTTCTTAATTGTTTTG
CAAAGATGTCTCCACTTACACCCTTGAGCATAGAGTGATAAGGTACAATT
CCTAAGTGTTTAGTATAAGACCAATGTTACGCATTTTAGTCAAATGGTTT
ACCCTTATTTATTCGTAACTTGGTTTCGTCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012167-exon-sc0000141-1491911889:281377..282459 | TCONS_00012167-exon-sc0000141-1491911889:281377..282459 | Clytia hemisphaerica | exon |
| TCONS_00012167-exon-sc0000141-1510915933:281377..282459 | TCONS_00012167-exon-sc0000141-1510915933:281377..282459 | Clytia hemisphaerica | exon |
| TCONS_00012167-exon-sc0000141-1575043694:281377..282459 | TCONS_00012167-exon-sc0000141-1575043694:281377..282459 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000141 | supercontig | sc0000141:281377..282459 + |
Blast
The following BLAST results are available for this feature:
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