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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011973 ID=TCONS_00011973|Name=TCONS_00011973|organism=Clytia hemisphaerica|type=transcript|length=1822bp TTCCAATCGAAAAGTGGGAGATGGCGGATGAAGAAGCGGGAAAGtgaata aaaaacaaaaaaacacaagaaaaatatgGAAATTATATTATAAGCAACCA GCCTGCACTTGGTATGCAAGAAATCATGAAGACACTGTTTCGTTTAGCTG TTATCGTCCTCTCAATTTGTCTACTAATCATCACCTATACACTGACAACC TCCAAAGAGAACGCATACTCTAAGTTTTCACACTCTAATGACAAACTTGT TCCAAAGAATGTTGATAAATTTGAAATACATCACATTGATCAAAAGAGTC GTGATGCAATCGAATCAAATTGGGATCAATTTTTTGGAGTCACTCGTTCA AATAGAAGAGGGAACGATGGTGCACAGGAAGTGGATCCTGAAGTCAATga gaatgaagaagaaaatgaagaggaaGAAGACTCCAAGCGATTAAAAACAG atgGGGCAGACGAAGAAGAGGAACAATGGGAGAAATATTTAATGAAACAT CCAACAGCAAAGAAAGGATTGAAAAATGGTGAAGACGTCTTACAAAAGAA ACACAAAGCTAACAAGAAGAGCAAAGGATCTCGTCATATCGaggaagaaa aaagaaacaaagaatcTTTGAAAGTTGACCGAAAATTGGAACATGTCCGT AAAAAGAAAGCTCggctaaagatgaaaattataTTAATTTATACTGGACT TCATAAGAAAGTGTATTGGTATAATTTACCTAAGAATGAAACCAAAAGTT ATTTGAGGCGTACCAAATGCCCACAAACAAAATGCCATATAACTTATGAT AAACAATTACTGCCATTAGCTGATGCTGTAATATTTCACGAGAGGAATAT GCCTAGTCTGGATATGCTACGCACATTATCGAGACGACAAAACAGACCTA TATCACAACGTTGGATTTACTTCACATCTGAGACACCCAAGAACTCTGCT ATATCATCAGTACCCTATGATGGGCTTTTTAACTGGACCATGACTTATAG GACGGATAGTGAtatttatttaccttatttACAATACAGAGaattagata aaaatgaaaaaccaccACCTGTTATAAATTATGCGAAAACGAAAAATAGT ACTATTGCTTGGTTAGTTGGTAATTGTAATTTTGGTTTTCGAATGAAATT TGCCACCCTGTTAGCGTTGGAGACAAAAGTATTTGTTGGTGGCGGTTGCC GTGACAACTATCCGGATCGTTTGCCATGTACAAGATGGTGTGGTTTAGAT ACATTAAAGACATACAAATTCTACTTATCCTTTGAGAATGGTGTTTGTAC AGACTATATCACAGAAAAATATTGGAGATACTTAGAATTGGGTCTAGTGC CTATAGTGTTGGGTGGCGCTGATTACAGCAATCCGAAACTTGTTATACCG GGATCATTCATAGATGCTTCTAAATTCAAAACGGTCAAAGATTTAGCTAA ATATGTTGAGtatttggataaaaatgataCAGCTTATAATGAATATTTTA CGTGGAAACAAAAGTATAAAATATGGCATCCACCGACTGGGGATTGGCCT TTTGAGAGTTATATGATGTGCGAGATATGCAAGAAATTGTTTTCCAACCT ACCCCCTAAAGTGTATACAAAATTATCCAATTTTTGGAATATACATACAG ATTGTGAGATTCCTGAAGATGATTTAACTGATAAGTTTATTCCCAAAGAT TTCGATAAAAATCAAGTTGATAAGGATGAATTGGAACGTATGAAACATTC GAAAGATAACATTCCCAAAGATTTTGATGAGGAGGATTGATGATGGGGTA TCTGGCGTTGATAAGTGTTACC Run BLAST on NCBI protein sequence of TCONS_00011973-protein >TCONS_00011973-protein ID=TCONS_00011973-protein|Name=TCONS_00011973-protein|organism=Clytia hemisphaerica|type=polypeptide|length=558bp
MQEIMKTLFRLAVIVLSICLLIITYTLTTSKENAYSKFSHSNDKLVPKNV DKFEIHHIDQKSRDAIESNWDQFFGVTRSNRRGNDGAQEVDPEVNENEEE NEEEEDSKRLKTDGADEEEEQWEKYLMKHPTAKKGLKNGEDVLQKKHKAN KKSKGSRHIEEEKRNKESLKVDRKLEHVRKKKARLKMKIILIYTGLHKKV YWYNLPKNETKSYLRRTKCPQTKCHITYDKQLLPLADAVIFHERNMPSLD MLRTLSRRQNRPISQRWIYFTSETPKNSAISSVPYDGLFNWTMTYRTDSD IYLPYLQYRELDKNEKPPPVINYAKTKNSTIAWLVGNCNFGFRMKFATLL ALETKVFVGGGCRDNYPDRLPCTRWCGLDTLKTYKFYLSFENGVCTDYIT EKYWRYLELGLVPIVLGGADYSNPKLVIPGSFIDASKFKTVKDLAKYVEY LDKNDTAYNEYFTWKQKYKIWHPPTGDWPFESYMMCEICKKLFSNLPPKV YTKLSNFWNIHTDCEIPEDDLTDKFIPKDFDKNQVDKDELERMKHSKDNI PKDFDEED Run BLAST on NCBI transcript from alignment at sc0000134:193770..204383- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011973 ID=TCONS_00011973|Name=TCONS_00011973|organism=Clytia hemisphaerica|type=transcript|length=10614bp|location=Sequence derived from alignment at sc0000134:193770..204383- (Clytia hemisphaerica) TTCCAATCGAAAAGTGGGAGATGGCGGATGAAGAAGCGGGAAAGGTGAGT
AATCGACAGTTTTATTAAATTCAAACTTGCTTTTAAATTTAAATTTGTCT
TTCTGAATTTTCCGAAGCATCATTATTACATTTACATGTTCCGGTTAGTG
GAGCCTATTCCCTCAAATATATTTTGCTACTACCTTGCAGTGTCCATGTG
TATGATTTATGAATTTCTAAATTTTTGATGACTGTCACGACCCTTGACAT
GGATGGCCCAAGAATTCTCGGGCCATGTTCGGGAGACCCTATCATTTCTT
TTGGCCCGAACATGACCCAAGTCATTCAGGCCATGTTCGGGCCATGTTAA
ATGTTAAATTGATTCAGCATGTCCAGTCAAACAAAATAGTACAAAATAAG
ATTTGTCTGTTTTGTTTATATCGCTCAAAAAGACTTTACGAGCTTCCTGT
GGACACACTTCAGTTTAAAACCAGGACCAGTTTACTAGCAAATATTTCCA
CCCTAAGTATATTTATAACTATGTTTTCATACCAAATAAGACATTTAATA
TTTATATGAATTTACAACATTCATATATTTAACCCTTTCCGTCACAAGTG
TTACGCGTAAGCCAAATCGCGTATTACGAACAACCTCTAAATTGCCGAGT
ACAGGAGAAAAAAAAATCGAAATTCAAAATGGCGGCCAAGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCGTGCCGATGTCGTATATATCCGACATGCAAATTTT
CACTCTACTTGCCAATGTCGTATATATCCGACATCAAATTTTTTTACCTA
TTTGCCGAGGCCTTTAAAAAAGAGGCAGCTCTATTGCCGAGAAATCAGCT
TTTAGGAAAATGGTTTTCTTATTTTGCCAATGTCGTATATATCCGACATA
AAACAATCCAAATAGTAATAGTGACAGTATATATTAAGTGCTCAAAAGAT
TTATTTCAGGTTTATTTTAGTCTATCATAAAATATATATAAAACAAATGT
CAAATACAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAGTGACAGTATATATTAAGTGCTCAAAAGA
TTTATTTCAGGTTTATTTTAGTCTATCATAAAATATAAAACAAATGTCAA
ATACAAATGTCAAACATTGGCAAATACGAATAAAATATCCTTGTCGTATA
TATACGACATGCGGCAACACGAGTTAAAATTTGCATGTCGTATAAATACG
ACATCGGCAAATCAGGTTACTAAAAAAAATTACCCCTCGGCAAATGGATT
GGGGTACAAAAACAAGGTACCGGCACGCAAAGGGTTAATATAATTAATTG
AAACCAAGTTTTTCTCAAAGAAAATGTTAAAAAAATTCAGTCCTGAAATT
ACACGCCTTTTTAAATCATGTTTTCAAAAATTGGCCCGAGTGTGGCCTGC
GTGTGGTCCAAACAGAAATCTGCCTCACAGCCTGAACCCCTCCTTGGTAT
ATATTAGTATACAAAACTTTTCCAGCCAACCCAGAACAGCCAAAAATATC
CAAAAATAGACCTTTTCAGGACCCTCCCGGCACTCCGGAAATATCCGGAG
AAAAAAGTGCCGTTTTTTTGTGCTTCGGAACACCGGGGAAGATTATGGTG
GCCGAATTGCCGTGGTAAAATTTCCTTAGAAAGTATGCAAAACATATGCA
AAAAGAAAGTATTAATATAGAACTTACATGCATAATTGGCATTATATTAA
AGTGTAATCTTGTAGAAGAAAGAATAAATTTGCTTCTTTTGAAAACTAGA
AATAATCAAATTCGCCCATCTCTTAGAACAAGCACTTCAAAAAACATAAC
ATTAGACATAAACTCAAACTGAAAAATCACCCGCGAAGGTAAAAAATAAT
CCTTATTCGGCTGACGGTAAATTATTCTCCTGGGAATAGAACCGCCANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCATAATTACTGCTTTCAGTTTGCGTGTTTTG
AAAGTTGGTGTGTGTACTCCGTCTTCGTGGAATTTTTTAATGGCATGAAA
ACAGAATATGCAATAGACCTTTTCGCCTTTGCGTCCGCCATATTGAATTG
TATGCAAAAATTATGGTTGCCGAATTGCGGTGGTGAAATTCCCTTAGAAA
GTATGCAAAACATATGCAAAAAGAAAGTATTAAATAAAAACTTACATGCA
TAATTGGCATTATATTGAAGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCG
TCTTCGTGGAATTTCTTAATGGCATGAAAACAGAATATGCAATGTCTTTA
AGAACAAATTCCTAAAAGGCTTTTGTTGTTCTGTAAATATTTCCTTTTGG
AAATAAAAATCCAACCACGGCATTTTCGTTCCTGTATTTTTGCATACAAT
TCAATATGGCGGACGCAAAGGCGAAAAGGTCTATGTCTTTAAGAACAAAT
TCCTAAAAGCCTTTTGTTGTTCGGTAAATATTTCTTTTTGGATTAAGAAA
TTCCATCTTTTATTGTTCTAATGATTATAAAATTTATTTATAAGATGCTT
TGTTGTCTTTTTTATCTTTGTGTAAACTTGCATATGTTTTGCATATTTTC
CAACTAAATCCAACCACAGCTTTTCGTTCCTATATTTTTGCATACAATTC
AATATGGCGGATGGAAAGGCGAAAAGGTCTATTCTGGAGCACTTCCAGTG
GTGGTGTTCCGGAGCACAATTACCAGTGACTGGTCGGCACTGGAACTCCA
GAATATTCCGATGCGTGCACTTCCGCTAACTGCGCACGCACGTATTTTTT
AAAAATCAGCTGACTCATTGTAGTTTCGATATTGACCAGTGATGCTTTTG
AATATAGCTAATGTGACAAATTCAATTTCATTAATGGCTGAACCATCATC
CTCAAAGACTGTACAAGCATTTTATTTGATCAAAGTGTCCATCACCACCT
GGGGGCAAATAATTTTTGTAACCATTTTTAAACGGTTTTTTAGAACGTGA
TAAAAATCACTTGCTCTGGAAGCACCAGAAGAGCTCAGGAACTTTCCGGA
GAGAAAAGTTGTCGTGGGTAGATTGTAATGTAAATGACTCTCCAGGATTT
TTGTACTTTCTCTATTTCCTATCTTCCATTCTACTTTCTGATGTTATTCT
GAGTTGAACTGTTCTAAGTTATATTCTGACTTTTTTAACCTATTTCTGAA
GTATACTCCCTTACCTCAGCTTGAACCACCAAATGCAAGCAACCTTGGTT
TCCAAACCCACGGACACGGCAGAAATCGAAACAAACAAATACTTTTAGGG
TGTAATTTAAAGACTCTATATATAATAGCTCCCAATCCTAACGGTGCCCC
TAAAAAGGTTGCTATGCAGCCCTATGTTGTGACCCTCGAGTCCAACCCTG
ACCCTAACTGAGATAATAACAGAACCCCCGTCTAAATGGAACCACCATAC
CCCCGTCTAAACGTTTCTGCATATTGAAAAAATTTTCGCCTTGGTAGTCA
TTTACATTCTACCCAACACCGAGAAAAGTAGTGTTTTTAGCTGCTCCGGG
AAACTCCCGCGCGGGGAGGGTCCTACCTTTTTCTGCCTATTTGCGCCTAT
TTGCTTTTCTATCTGCCATATTGAATCATATGCTGAAATACAGGAACGAA
AAAGCTGTGATCGAATTTAGTTGGAAAATATGCCACAAAAAATATTATGA
AATTTTCCACAGAGATTTAAAAGACAACAAAGCATCATAATATAAAGCAA
TATTATACTATTAAGAACAATAAAAGGTGGAATTTCTTAATTCAGGAAGA
AATATTTACAAAAAAAGCCTTTTAGAAGTTTTTACCCAAAGACACCTCCG
TATTCTGTTTTGATTCCATTAAAAAATGGAATATACGTACCAGACTTTCA
AAACACGCAAATTGTAACGTCTCACATTATTTCCTGTGCAAGAAAATATT
AAAACCCTGCTTTGATATACAAGAACAACTGCAACACGTTAGAAAAGACC
GCTGTAAATCAGGGGGTTCAGATTAATGTTTTGATTTGATTATTTTGTGG
TGCTATTCCCAGGATAATAATCTACCGTCAGCCCAATAAGGATTATTATT
GTACCTTCACTGGTGATTTTTAAGCTTGAGAATAAAAAATATAATAAACT
AGACTGTGAAATAGTTCACCGCCTAGATATTCAGGTCAAGTCCAACACTT
CTAGCTAGCTAGAGCACAAAAAAGGTACTTTTTTTGCTACCATTTGCATG
GTAACCTAATCAATTTTACACCATAGGCCATCCAACCTTTTCACTGTACA
CCACCAGGGTGTACCATTTTAAGGACTTTTTGCTTTGTAGACTTCTCTTT
TATAAAGAAAATCAATAAATTAAAATTTAAGATTTAGGCTTCTCCTACAA
AAGACTTATTTCATATTTTAAAGAGTTGATGATCAATCACTAGATTTTAG
AATAGGCTCAATTACCTATCGATTATTAAAGTCAATCAATGACCAATCCA
TCTCGTGCAAGCCTAATATTTTTTCCCTTGTGGACTTCAGGGGAAAACAG
GTGAATGATATTCTTTGAAGGAAGAACTTACGAAAAGACTTGTTAACAAA
AGGATGTCTTTTGAGGCTGTTTGAGGTTTAGACTGGATCCTATGAAAATG
AAGAAAACAAATTACAATGGGTTCTTTTGTAAACTCCTAAACTCTAATTT
TGTTCTCTTCCTCCCTCAAGCCCTCGTATCTTAGGGTACGGGTTTTGGGC
ATCTGAGTCACAAATCAGCAAAAAACTGGTGTTTTCTGTAAATCTGACAA
TCCCAAAAAGATCTTCACGGAATATAACAATGTAAAGCTAAGAACGATGG
CCATCTCATATTACATAATGAGTGTTGATTAAAGTTCCTTAGGTTGAATT
TTTATCTTCAAGTACTTTTCATTAATTACTAGCCATGTTGAATGCACAAG
AAATTATAGAACAAGGTAACAAACCTACTAGTCTACCAGATACTGGTGGT
CTTAAATTCTTTAAAGTTGACGAGCACGACAAAGAACAAAAAGAGAGTAT
TGACTATACATTGGATAATTATGCGCAGTGTCTTAAAGAGGAGCGTGTGT
GCAGAAAAATGAATCTATCAGTTGCTTCTTGGGAAGATGAACTCTCCCTT
GCTCTTGTTACCTCAATGAAAGGAAGTACAGTACAAAAATTTGGTTTCCA
ATCAAAAAATGGTAAATTTCTATACGCTGAAGAATGTTTGTTTTTGATGG
AGCAAGGCATATTGGAACTTTTTGTGGATGAAATCACTTTATCTTTACAA
GAGGCTTTCTCTTTGTTGCTTCCTTTACAACCCTCCTTTGAACATTATCA
GATTTATACAAATCTTTGTCGTCAAGGTTTCTTGGTCAATCGTTACAAAC
CCTCCTTAAATGAAGATGATATTTCTACTGTAAATGAACATAATGAATTT
CCAGATACTGAAAAATCATCAGCAGACTTGAATAAAATTGATATTGATGA
CACTTTAAAGAAAGGTTATATGAAGGATTTATGGAAAGGTGACATTACTC
CTTTAATGCAACCTTCTGAGTCAACATCTACTGCAGCCGTTCTTTCAAAG
CTGCAAACATCAAAAATGATACATCTTAAAAAAGACAGTATGGAAGATAA
ACACCAAGACCTTCCTAAATTCAAAATCGATTTTGACGTATACACTTCAA
AGGAATTACGTAAACAAAATAAAGATACCAATGCTTCACCACATTTTCGT
GTCACAGTTTGTAAATATGACCAGGACCCACCAACGTTCAAAGATTTGTC
TCGTTTAACCAAAGAAGCTGCGGGTGTTCACTTAAAAATAGGTGTGGTAA
ATCAAGGCACTGTTACTTTTTATGGCATGTTTTCTACTGACCTTCCAACT
GTTATTTCTGTACCGTGAAATATATTTTTCTTTTTTTTTACACTTTTTCA
CATTGTTATTTCTGTAGCTTTTTTATTTGAAATTTTCTGTCCTTTTTTCC
ACCCACAATACAGCTACTTTCTATAAGAAATACAACTTCCCAGCCTTTTT
GTGGGGTGAGAGATTTATAATAAATAGTGAGAATGTGTGAAAGTCCTGAA
AAAATTTTCCTTTAAAATGTGTATTAAAGGTTTGTAAATTGGGTCATCTC
AATGCTTAAAATGTTTACAGTCTAATTCAATCAGATTCAATCCTTTTTTT
TCAGTGAATAAAAAACAAAAAAACACAAGAAAAATATGGAAATTATATTA
TAAGCAACCAGCCTGCACTTGGTATGCAAGAAATCATGAAGACACTGTTT
CGTTTAGCTGTTATCGTCCTCTCAATTTGTCTACTAATCATCACCTATAC
ACTGACAACCTCCAAAGAGAACGCATACTCTAAGTTTTCACACTCTAATG
ACAAGTAAGAATCTTTTTTTCAATTTCTTTCAGTCCTGATTTTAAAATCC
CCTCTTAAATCATATCCTATCTGTGTTTGAACTGAAGCCACTTGTCCTAG
TTTTTCGTCAATTTAAGGTAATGTCTTTCCTTACGTTTGATTTTTTTTAG
AAAAGACCAGTAATATTTTCAATTTATCCATTGAAATGGTGTTCATAAAT
AGGTTTCTTTTCCTACATTAGACTTGTTCCAAAGAATGTTGATAAATTTG
AAATACATCACATTGATCAAAAGAGTCGTGATGCAATCGAATCAAATTGG
GATCAATTTTTTGGAGTCACTCGTTCAAATAGAAGGTACAATTAGCTGGT
TTATCCATTATGTAAAAATAGACTGGAATTATACTTCTACGAATTCTTCA
CTAGCTGAGTATCCCTTATTGTGAGAGCGTTCGTTGGTAAAAAGTGACGA
AAGAATTGTGACTAAAGTATTTACCCTCAAATTTTTGAAGCCGAGAAACT
TATTACCAATGATTAATTTTGACTAAGAAATGTTTTTTACCAAATAATTC
CTGGTTACTTTGAACATTTTTTCGTTTAAGGTATTTGTACACTCTTTTTC
CGATTTTTTTGTCACCAAATCTTTTACCGACAATTTTTTACCAATAAGAT
ATTGACAAGGTGAATTGAATGTACTCATTGTGAAAAAATCGAATACACCT
GAATGTTAAGAGTTATTTTGTCGAATAAATGTTGTTGTGTCGTTATCAAA
CAAAAACAATTTTACTCAAGAATTCTTTTAAAATTCTCAATTTTCCAGAG
GGAACGATGGTGCACAGGAAGTGGATCCTGAAGTCAATGAGAATGAAGAA
GAAAATGAAGAGGAAGAAGACTCCAAGCGATTAAAAACAGGTGAGCATGA
TATTTGAACCTTTAGTCATCCCTTTGAAATAATATAATAAGTGTAAGAGT
TTACAACTTTTATTTTGATTTATTTCGAAGCATAGTTTGGACCCCTTTTT
GGATGCGATGGTACCCTCCGAAAAAGCTGGTACCCGAAGATTGACTAAGC
ATTCATTTTCTAGTTAGAATTGTGCATTTTCTTTTTCCGTATTTCCTTTC
AAAGGAGAATTTGTCTAAACTACATTGAGTTTGGAAGTTTATTTTGTTTC
AGTAGTAGTAGACATTAAAAGCATTCAATATTTACCATGGGGAACCGACG
TCTTTCAAGGTCGGGGACAACCTCGTCCCTGTGTATCCCAGGCTTTGCTT
GCGTTCCTAACGGACACCAGACAGTCTGTGTCACTAACTCGATCGGGAAG
ATTCTTCCAAAATTGGAAAATCGCTGAAAAACTTTAAAATTTGATGCTTC
TTCACCTCCAAAAAGTTTCAACTTTCGCCGGTTATCGTACAGCTTCGCCG
AGATTCAATCAATTTTCAACTTCTCAAAGAGGAAGAATCTTCCAAAACGG
GCAGAAAAAAATAGAGTAAGTTCTTCCCGTTCGGGAATTTTCTTCCCATT
TCGGAAGAATCTTCCCGATCGAGTTAGTGGCACAGACTGCCAGAGGATTA
TCTGGCGGAATCAGTAACCATAAAAGCTGTTAATACACAGGGAAAGAGCC
TGGGTTTAGGATGCCAAGAAAGGTGGTCTTCAAAAGACCCTTTCCGCACT
GCTCAGTCTAGATTTCCAAATTAAAAAGTGATTTTTTTTAAGATGGGGCA
GACGAAGAAGAGGAACAATGGGAGAAATATTTAATGAAACATCCAACAGC
AAAGAAAGGATTGAAAAATGGTGAAGACGTCTTACAAAAGAAACACAAAG
CTAACAAGAAGAGCAAAGGATCTCGTCATATCGAGGAAGAAAAAAGAAAC
AAAGAATCTTTGAAAGTTGACCGAAAATTGGAACATGTCCGTAAAAAGAA
AGCTCGGCTAAAGATGAAAATTATATTAATTTATACTGGACTTCATAAGA
AAGTGTATTGGTATAATTTACCTAAGAATGAAACCAAAAGTTATTTGAGG
CGTACCAAATGCCCACAAACAAAATGCCATATAACTTATGATAAACAATT
ACTGCCATTAGCTGATGCTGTAATATTTCACGAGAGGAATATGCCTAGTC
TGGATATGCTACGCACATTATCGAGACGACAAAACAGACCTATATCACAA
CGTTGGATTTACTTCACATCTGAGACACCCAAGAACTCTGCTATATCATC
AGTACCCTATGATGGGCTTTTTAACTGGACCATGACTTATAGGACGGATA
GTGATATTTATTTACCTTATTTACAATACAGAGAATTAGATAAAAATGAA
AAACCACCACCTGTTATAAATTATGCGAAAACGAAAAATAGTACTATTGC
TTGGTTAGTTGGTAATTGTAATTTTGGTTTTCGAATGAAATTTGCCACCC
TGTTAGCGTTGGAGACAAAAGTATTTGTTGGTGGCGGTTGCCGTGACAAC
TATCCGGATCGTTTGCCATGTACAAGATGGTGTGGTTTAGATACATTAAA
GACATACAAATTCTACTTATCCTTTGAGAATGGTGTTTGTACAGACTATA
TCACAGAAAAATATTGGAGATACTTAGAATTGGGTCTAGTGCCTATAGTG
TTGGGTGGCGCTGATTACAGCAATCCGAAACTTGTTATACCGGGATCATT
CATAGATGCTTCTAAATTCAAAACGGTCAAAGATTTAGCTAAATATGTTG
AGTATTTGGATAAAAATGATACAGCTTATAATGAATATTTTACGTGGAAA
CAAAAGTATAAAATATGGCATCCACCGACTGGGGATTGGCCTTTTGAGAG
TTATATGATGTGCGAGATATGCAAGAAATTGTTTTCCAACCTACCCCCTA
AAGTGTATACAAAATTATCCAATTTTTGGAATATACATACAGATTGTGAG
ATTCCTGAAGATGATTTAACTGATAAGTTTATTCCCAAAGATTTCGATAA
AAATCAAGTTGATAAGGATGAATTGGAACGTATGAAACATTCGAAAGATA
ACATTCCCAAAGATTTTGATGAGGAGGATTGATGATGGGGTATCTGGCGT
TGATAAGTGTTACC Coding sequence (CDS) from alignment at sc0000134:193770..204383- >TCONS_00011973 ID=TCONS_00011973|Name=TCONS_00011973|organism=Clytia hemisphaerica|type=CDS|length=6708bp|location=Sequence derived from alignment at sc0000134:193770..204383- (Clytia hemisphaerica) ATGGGGCAGACGAAGAAGAGGAACAATGGGAGAAATATTTAATGAAACAT CCAACAGCAAAGAAAGGATTGAAAAATGGTGAAGACGTCTTACAAAAGAA ACACAAAGCTAACAAGAAGAGCAAAGGATCTCGTCATATCGAGGAAGAAA AAAGAAACAAAGAATCTTTGAAAGTTGACCGAAAATTGGAACATGTCCGT AAAAAGAAAGCTCGGCTAAAGATGAAAATTATATTAATTTATACTGGACT TCATAAGAAAGTGTATTGGTATAATTTACCTAAGAATGAAACCAAAAGTT ATTTGAGGCGTACCAAATGCCCACAAACAAAATGCCATATAACTTATGAT AAACAATTACTGCCATTAGCTGATGCTGTAATATTTCACGAGAGGAATAT GCCTAGTCTGGATATGCTACGCACATTATCGAGACGACAAAACAGACCTA TATCACAACGTTGGATTTACTTCACATCTGAGACACCCAAGAACTCTGCT ATATCATCAGTACCCTATGATGGGCTTTTTAACTGGACCATGACTTATAG GACGGATAGTGATATTTATTTACCTTATTTACAATACAGAGAATTAGATA AAAATGAAAAACCACCACCTGTTATAAATTATGCGAAAACGAAAAATAGT ACTATTGCTTGGTTAGTTGGTAATTGTAATTTTGGTTTTCGAATGAAATT TGCCACCCTGTTAGCGTTGGAGACAAAAGTATTTGTTGGTGGCGGTTGCC GTGACAACTATCCGGATCGTTTGCCATGTACAAGATGGTGTGGTTTAGAT ACATTAAAGACATACAAATTCTACTTATCCTTTGAGAATGGTGTTTGTAC AGACTATATCACAGAAAAATATTGGAGATACTTAGAATTGGGTCTAGTGC CTATAGTGTTGGGTGGCGCTGATTACAGCAATCCGAAACTTGTTATACCG GGATCATTCATAGATGCTTCTAAATTCAAAACGGTCAAAGATTTAGCTAA ATATGTTGAGTATTTGGATAAAAATGATACAGCTTATAATGAATATTTTA CGTGGAAACAAAAGTATAAAATATGGCATCCACCGACTGGGGATTGGCCT TTTGAGAGTTATATGATGTGCGAGATATGCAAGAAATTGTTTTCCAACCT ACCCCCTAAAGTGTATACAAAATTATCCAATTTTTGGAATATACATACAG ATTGTGAGATTCCTGAAGATGATTTAACTGATAAGTTTATTCCCAAAGAT TTCGATAAAAATCAAGTTGATAAGGATGAATTGGAACGTATGAAACATTC GAAAGATAACATTCCCAAAGATTTTGATGAGGAGGATTGAAGGGAACGAT GGTGCACAGGAAGTGGATCCTGAAGTCAATGAGAATGAAGAAGAAAATGA AGAGGAAGAAGACTCCAAGCGATTAAAAACAGACTTGTTCCAAAGAATGT TGATAAATTTGAAATACATCACATTGATCAAAAGAGTCGTGATGCAATCG AATCAAATTGGGATCAATTTTTTGGAGTCACTCGTTCAAATAGAAGATGC AAGAAATCATGAAGACACTGTTTCGTTTAGCTGTTATCGTCCTCTCAATT TGTCTACTAATCATCACCTATACACTGACAACCTCCAAAGAGAACGCATA CTCTAAGTTTTCACACTCTAATGACAAATGGGGCAGACGAAGAAGAGGAA CAATGGGAGAAATATTTAATGAAACATCCAACAGCAAAGAAAGGATTGAA AAATGGTGAAGACGTCTTACAAAAGAAACACAAAGCTAACAAGAAGAGCA AAGGATCTCGTCATATCGAGGAAGAAAAAAGAAACAAAGAATCTTTGAAA GTTGACCGAAAATTGGAACATGTCCGTAAAAAGAAAGCTCGGCTAAAGAT GAAAATTATATTAATTTATACTGGACTTCATAAGAAAGTGTATTGGTATA ATTTACCTAAGAATGAAACCAAAAGTTATTTGAGGCGTACCAAATGCCCA CAAACAAAATGCCATATAACTTATGATAAACAATTACTGCCATTAGCTGA TGCTGTAATATTTCACGAGAGGAATATGCCTAGTCTGGATATGCTACGCA CATTATCGAGACGACAAAACAGACCTATATCACAACGTTGGATTTACTTC ACATCTGAGACACCCAAGAACTCTGCTATATCATCAGTACCCTATGATGG GCTTTTTAACTGGACCATGACTTATAGGACGGATAGTGATATTTATTTAC CTTATTTACAATACAGAGAATTAGATAAAAATGAAAAACCACCACCTGTT ATAAATTATGCGAAAACGAAAAATAGTACTATTGCTTGGTTAGTTGGTAA TTGTAATTTTGGTTTTCGAATGAAATTTGCCACCCTGTTAGCGTTGGAGA CAAAAGTATTTGTTGGTGGCGGTTGCCGTGACAACTATCCGGATCGTTTG CCATGTACAAGATGGTGTGGTTTAGATACATTAAAGACATACAAATTCTA CTTATCCTTTGAGAATGGTGTTTGTACAGACTATATCACAGAAAAATATT GGAGATACTTAGAATTGGGTCTAGTGCCTATAGTGTTGGGTGGCGCTGAT TACAGCAATCCGAAACTTGTTATACCGGGATCATTCATAGATGCTTCTAA ATTCAAAACGGTCAAAGATTTAGCTAAATATGTTGAGTATTTGGATAAAA ATGATACAGCTTATAATGAATATTTTACGTGGAAACAAAAGTATAAAATA TGGCATCCACCGACTGGGGATTGGCCTTTTGAGAGTTATATGATGTGCGA GATATGCAAGAAATTGTTTTCCAACCTACCCCCTAAAGTGTATACAAAAT TATCCAATTTTTGGAATATACATACAGATTGTGAGATTCCTGAAGATGAT TTAACTGATAAGTTTATTCCCAAAGATTTCGATAAAAATCAAGTTGATAA GGATGAATTGGAACGTATGAAACATTCGAAAGATAACATTCCCAAAGATT TTGATGAGGAGGATTGAAGGGAACGATGGTGCACAGGAAGTGGATCCTGA AGTCAATGAGAATGAAGAAGAAAATGAAGAGGAAGAAGACTCCAAGCGAT TAAAAACAGACTTGTTCCAAAGAATGTTGATAAATTTGAAATACATCACA TTGATCAAAAGAGTCGTGATGCAATCGAATCAAATTGGGATCAATTTTTT GGAGTCACTCGTTCAAATAGAAGATGCAAGAAATCATGAAGACACTGTTT CGTTTAGCTGTTATCGTCCTCTCAATTTGTCTACTAATCATCACCTATAC ACTGACAACCTCCAAAGAGAACGCATACTCTAAGTTTTCACACTCTAATG ACAAATGGGGCAGACGAAGAAGAGGAACAATGGGAGAAATATTTAATGAA ACATCCAACAGCAAAGAAAGGATTGAAAAATGGTGAAGACGTCTTACAAA AGAAACACAAAGCTAACAAGAAGAGCAAAGGATCTCGTCATATCGAGGAA GAAAAAAGAAACAAAGAATCTTTGAAAGTTGACCGAAAATTGGAACATGT CCGTAAAAAGAAAGCTCGGCTAAAGATGAAAATTATATTAATTTATACTG GACTTCATAAGAAAGTGTATTGGTATAATTTACCTAAGAATGAAACCAAA AGTTATTTGAGGCGTACCAAATGCCCACAAACAAAATGCCATATAACTTA TGATAAACAATTACTGCCATTAGCTGATGCTGTAATATTTCACGAGAGGA ATATGCCTAGTCTGGATATGCTACGCACATTATCGAGACGACAAAACAGA CCTATATCACAACGTTGGATTTACTTCACATCTGAGACACCCAAGAACTC TGCTATATCATCAGTACCCTATGATGGGCTTTTTAACTGGACCATGACTT ATAGGACGGATAGTGATATTTATTTACCTTATTTACAATACAGAGAATTA GATAAAAATGAAAAACCACCACCTGTTATAAATTATGCGAAAACGAAAAA TAGTACTATTGCTTGGTTAGTTGGTAATTGTAATTTTGGTTTTCGAATGA AATTTGCCACCCTGTTAGCGTTGGAGACAAAAGTATTTGTTGGTGGCGGT TGCCGTGACAACTATCCGGATCGTTTGCCATGTACAAGATGGTGTGGTTT AGATACATTAAAGACATACAAATTCTACTTATCCTTTGAGAATGGTGTTT GTACAGACTATATCACAGAAAAATATTGGAGATACTTAGAATTGGGTCTA GTGCCTATAGTGTTGGGTGGCGCTGATTACAGCAATCCGAAACTTGTTAT ACCGGGATCATTCATAGATGCTTCTAAATTCAAAACGGTCAAAGATTTAG CTAAATATGTTGAGTATTTGGATAAAAATGATACAGCTTATAATGAATAT TTTACGTGGAAACAAAAGTATAAAATATGGCATCCACCGACTGGGGATTG GCCTTTTGAGAGTTATATGATGTGCGAGATATGCAAGAAATTGTTTTCCA ACCTACCCCCTAAAGTGTATACAAAATTATCCAATTTTTGGAATATACAT ACAGATTGTGAGATTCCTGAAGATGATTTAACTGATAAGTTTATTCCCAA AGATTTCGATAAAAATCAAGTTGATAAGGATGAATTGGAACGTATGAAAC ATTCGAAAGATAACATTCCCAAAGATTTTGATGAGGAGGATTGAAGGGAA CGATGGTGCACAGGAAGTGGATCCTGAAGTCAATGAGAATGAAGAAGAAA ATGAAGAGGAAGAAGACTCCAAGCGATTAAAAACAGACTTGTTCCAAAGA ATGTTGATAAATTTGAAATACATCACATTGATCAAAAGAGTCGTGATGCA ATCGAATCAAATTGGGATCAATTTTTTGGAGTCACTCGTTCAAATAGAAG ATGCAAGAAATCATGAAGACACTGTTTCGTTTAGCTGTTATCGTCCTCTC AATTTGTCTACTAATCATCACCTATACACTGACAACCTCCAAAGAGAACG CATACTCTAAGTTTTCACACTCTAATGACAAATGGGGCAGACGAAGAAGA GGAACAATGGGAGAAATATTTAATGAAACATCCAACAGCAAAGAAAGGAT TGAAAAATGGTGAAGACGTCTTACAAAAGAAACACAAAGCTAACAAGAAG AGCAAAGGATCTCGTCATATCGAGGAAGAAAAAAGAAACAAAGAATCTTT GAAAGTTGACCGAAAATTGGAACATGTCCGTAAAAAGAAAGCTCGGCTAA AGATGAAAATTATATTAATTTATACTGGACTTCATAAGAAAGTGTATTGG TATAATTTACCTAAGAATGAAACCAAAAGTTATTTGAGGCGTACCAAATG CCCACAAACAAAATGCCATATAACTTATGATAAACAATTACTGCCATTAG CTGATGCTGTAATATTTCACGAGAGGAATATGCCTAGTCTGGATATGCTA CGCACATTATCGAGACGACAAAACAGACCTATATCACAACGTTGGATTTA CTTCACATCTGAGACACCCAAGAACTCTGCTATATCATCAGTACCCTATG ATGGGCTTTTTAACTGGACCATGACTTATAGGACGGATAGTGATATTTAT TTACCTTATTTACAATACAGAGAATTAGATAAAAATGAAAAACCACCACC TGTTATAAATTATGCGAAAACGAAAAATAGTACTATTGCTTGGTTAGTTG GTAATTGTAATTTTGGTTTTCGAATGAAATTTGCCACCCTGTTAGCGTTG GAGACAAAAGTATTTGTTGGTGGCGGTTGCCGTGACAACTATCCGGATCG TTTGCCATGTACAAGATGGTGTGGTTTAGATACATTAAAGACATACAAAT TCTACTTATCCTTTGAGAATGGTGTTTGTACAGACTATATCACAGAAAAA TATTGGAGATACTTAGAATTGGGTCTAGTGCCTATAGTGTTGGGTGGCGC TGATTACAGCAATCCGAAACTTGTTATACCGGGATCATTCATAGATGCTT CTAAATTCAAAACGGTCAAAGATTTAGCTAAATATGTTGAGTATTTGGAT AAAAATGATACAGCTTATAATGAATATTTTACGTGGAAACAAAAGTATAA AATATGGCATCCACCGACTGGGGATTGGCCTTTTGAGAGTTATATGATGT GCGAGATATGCAAGAAATTGTTTTCCAACCTACCCCCTAAAGTGTATACA AAATTATCCAATTTTTGGAATATACATACAGATTGTGAGATTCCTGAAGA TGATTTAACTGATAAGTTTATTCCCAAAGATTTCGATAAAAATCAAGTTG ATAAGGATGAATTGGAACGTATGAAACATTCGAAAGATAACATTCCCAAA GATTTTGATGAGGAGGATTGAAGGGAACGATGGTGCACAGGAAGTGGATC CTGAAGTCAATGAGAATGAAGAAGAAAATGAAGAGGAAGAAGACTCCAAG CGATTAAAAACAGACTTGTTCCAAAGAATGTTGATAAATTTGAAATACAT CACATTGATCAAAAGAGTCGTGATGCAATCGAATCAAATTGGGATCAATT TTTTGGAGTCACTCGTTCAAATAGAAGATGCAAGAAATCATGAAGACACT GTTTCGTTTAGCTGTTATCGTCCTCTCAATTTGTCTACTAATCATCACCT ATACACTGACAACCTCCAAAGAGAACGCATACTCTAAGTTTTCACACTCT AATGACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00011973-exon-sc0000134-1575043694:204340..204383 | TCONS_00011973-exon-sc0000134-1575043694:204340..204383 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1575043694:196830..197029 | TCONS_00011973-exon-sc0000134-1575043694:196830..197029 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1575043694:196499..196612 | TCONS_00011973-exon-sc0000134-1575043694:196499..196612 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1575043694:195944..196035 | TCONS_00011973-exon-sc0000134-1575043694:195944..196035 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1575043694:193770..195141 | TCONS_00011973-exon-sc0000134-1575043694:193770..195141 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1510915933:204340..204383 | TCONS_00011973-exon-sc0000134-1510915933:204340..204383 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1510915933:196830..197029 | TCONS_00011973-exon-sc0000134-1510915933:196830..197029 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1510915933:196499..196612 | TCONS_00011973-exon-sc0000134-1510915933:196499..196612 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1510915933:195944..196035 | TCONS_00011973-exon-sc0000134-1510915933:195944..196035 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1510915933:193770..195141 | TCONS_00011973-exon-sc0000134-1510915933:193770..195141 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1491911889:204340..204383 | TCONS_00011973-exon-sc0000134-1491911889:204340..204383 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1491911889:196830..197029 | TCONS_00011973-exon-sc0000134-1491911889:196830..197029 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1491911889:196499..196612 | TCONS_00011973-exon-sc0000134-1491911889:196499..196612 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1491911889:195944..196035 | TCONS_00011973-exon-sc0000134-1491911889:195944..196035 | Clytia hemisphaerica | exon |
TCONS_00011973-exon-sc0000134-1491911889:193770..195141 | TCONS_00011973-exon-sc0000134-1491911889:193770..195141 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000134 | supercontig | sc0000134:193770..204383 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0008417 | fucosyltransferase activity |
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0006486 | protein glycosylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006486 |
protein glycosylation |
cellular_component |
GO:0016020 |
membrane |
molecular_function |
GO:0008417 |
fucosyltransferase activity |
Blast
BLAST of TCONS_00011973 vs. Swiss-Prot (Human)
Match: FUT6 (Alpha-(1,3)-fucosyltransferase 6 OS=Homo sapiens GN=FUT6 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.462e-39 Identity = 102/274 (37.23%), Postives = 144/274 (52.55%), Query Frame = 3
Query: 783 CHITYDKQLLPLADAVIFHERNM---PSLDMLRTLSRRQNRPISQRWIYFTSETPKNSAISSVPYDGLFNWTMTYRTDSDIYLPYLQYRELDKNEKPPPVINYAKTKNSTIAWLVGNCNF-GFRMKFATLLALETKVFVGGGCRDNYPDRLPCTRWCGLDTLKTYKFYLSFENGVCTDYITEKYWR-YLELGLVPIVLGGADYSNPKLVIPGSFIDASKFKTVKDLAKYVEYLDKNDTAYNEYFTWKQKYKIWHPPTGDWPFESYMMCEICKKL 1589
C+IT D+++ P ADAVI H R + PS + R+ RRQ QRWI+F+ E+P + DG FN TM+YR+DSDI+ PY PP+ AKT+ +AW V N R+++ L KV V G P ++TL YKFYL+FEN + DYITEK WR LE VP+VLG + + + + P +FI F++ KDLA+Y++ LDK+ Y YF W++ + P + W + C+ C KL
Sbjct: 90 CNITADRKVYPQADAVIVHHREVMYNPSAQLPRS-PRRQG----QRWIWFSMESPSHCWQLKA-MDGYFNLTMSYRSDSDIFTPYGWLEPWSGQPAHPPLNLSAKTE--LVAWAVSNWGPNSARVRYYQSLQAHLKVDVYGRSHKPLPQG------TMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLR---PRSFSW---ALAFCKACWKL 343
The following BLAST results are available for this feature:
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