TCONS_00011934 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011934
Unique NameTCONS_00011934
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4546

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011934 ID=TCONS_00011934|Name=TCONS_00011934|organism=Clytia hemisphaerica|type=transcript|length=4546bp
GAAGCATCTCTGAAGGTTGGCTTATGCAATAAAAGAGACAAGTAACGGTC
ACGGCATCGATTTATTTTGTACACCAGACTCAATGACAATCACTTTGGAA
ATGAATATCGATCCAAAAGTATATAGCACCTCAATCGTCAAATTCGAAAA
TACTAATTGTACGGCAACAACAAATGGAACACATTTCTTTATTACGTCAC
AATTTAACGAATGTAACACACAAATCGGGGAAACAGTAGATGATATCGTG
TTCTCAAATCGGGTTATTGTGGACCCGAATAATTTAAAACCGGACGCGAT
CATTCAGCGGTTGGAACATACTGAACATATTTATCCAGTCAATTGCTTGT
TGAGGAAGGAAAATGTGGTGGTAACAAATACAGGATATAACCTTACAGGT
GACGGATGGGAAGAATGGGGAGCGTGGTCAGAATGCACCAAAACTTGCGG
AGGAGGAACAACAACTAGGAAGAGAGATTGCCGTGTATCGCGTAGAGATG
ATCTAAATTGTCCAGGATTGGAGGTCGAAGTTGCCCATTGTAATAATGTC
ACTTGCCCATTGACATGCGACGATATagaatgtgattttttcaatcaTGA
AGAATGCGAACCACATTATATCTTTCAAAATGCAACGTGTGAATGTATGA
AAGGCTGGTATGAACTGGATGACGGTACATGTGACACAGAAGAGAAAATA
GTTGGAGTACAAATCACCTTGGGATCTGATTTTCAAGATGAATTTGTGTC
ATTTAAATCGAACATTACATCAGACTTTAAATCGAGAATCGAAACACAAT
TTACCCTACAACTGGGGCTTGTACCACCAGAACGTTTTATGGTTACCGAA
TTTTCCGCGGGTAGTGTGATTGTGGACGGCCTGGTCATTCTTCCTCGAAA
CACaacagaaaacaaaacaacaattcAAGAAAAACTGGTGACTGAGTTAC
AAACGAACACGACCGGTTTATTGGAAGAATTTAATGTCACTAAAATTAAT
AAAGTTAATGaaaCCTACATTTGCGAGCTTGAATCAGACACATGCAACCG
AACGCGATCAAACTGCACTGATACACCAGACCTCTTAACTCATTATCAAT
GTGATTGTTTTGAAGGCTACATCAACAAAACCGTGTATATCTGTCAAGAT
TATTGTGAATATGGTATCGACACGTGTAACAATATATCAACTGTGTGTAG
AGGAACACCAGGGGTCGGTCGCCATTATGAATGTGATTGTGCTTTTGGTT
TCGAGCGGTTAGATAATAGTACTGATACATGTACACCAATGCCTCGACCA
TGTGATAATTCAACAATGAACACGTGTAATAATTCAACATCAACGTGCAT
CAATACCTTTACGGCACCCATCTATTATAACTGTGCTTGTAACGATGGTT
ACCTGAAGTTTAACAACACTGTTGATCAATGTTTGGATTATTGCGTCTCA
AATAACGATACTTGTGATGATAACACGACAATGTGTCGCGCAACACCCGG
CGACGGACGTCATTATGAATGTGACTGCAAATATAAACACGTAAGGCTAG
ACAACAACACTGACGCCTGCACACTAGCCGATACTCCATGTGCTTGGGGA
AATGATACTTGTGATAAAGATATATCAACATGTATCGATACTTACACGCA
TCCAAACTACTTTGACTGTAACTGTTCAGCCGGATATGTCAAACAAAATC
ATACGACATGTTTCGACTTTTGCGTTGATAACTCCGACACATGTAACGAC
ACATCAACGACGTGTTTGGCGACACCTGGTAAAGGGCGGCATTACGAATG
TCCTTGTAAACATGGATTTGAGAGACTCGATAACAACACGGACTCATGTA
CACCGATGCCAAGACCTTGTGATACAGGGAAAGATACTTGTAACAAGACA
CGATCCAATTGCACAAACACTTTGACAGCTCCGGTTTACTTCAACTGCTC
GTGTGGTGATGGTTATCTCAAATTCAACAACTCAGTTGATGATTGTCAAG
ACTACTGTCATATTGAAGCTGATTCCTGCAACAAAACTTCAACGATGTGT
GAGGCAACTCCTGGCAAAGGACGACATTATGAATGTCCATGTAAATTTGG
TTTCGAGAGATTAGATAACAACACAGACAGTTGCACACCAATGCCAAGAC
CTTGCGACACAGGGAAAGATACTTGCAATAAAACTTCATCCAACTGTACA
AACAGCTTCGAAGCTCCTTTCTACTACAATTGTACCTGTGAAGCTGGTTA
TTTGAAGTTTAACAGCTCCTTGGATCAATGTCATGAGTATTGTCGTATTG
AGGCTGATACCTGCAATACAACCTCTACAACTTGTATGTCTACTCCTGGC
AAAGGACGACACTACGAATGTCCATGTAAACATGGCTTTGAGAGACTCGA
CAACAACATGGACAAATGTACGCCGATGCCAAGACCTTGTGACACAGGGA
AAGATACTTGTAACAAGACAAGATCCAATTGCACAAACACTTTGACAGCT
CCGGTTTACTTCAACTGCTCGTGTGGTGATGGTTATCTCAAATTCAACAA
CTCCGTTGATGATTGTCAAGACTACTGTCATATTGAAGCTGATTCCTGCA
ACAAAACTTCAACGATGTGTGAGGCAACTCCTGGTAAAGGACGACATTAT
GAATGTCCATGTAAATTTGGTTTCGAGAGATTAGATAACAACACAGACAG
TTGCACACCAATGCCGAGACCTTGCGACACAGGGAAAGATACTTGCAATA
TGACTACATCAACCTGTAACAATACTTTCACAAACCCTGACTATTACAAC
TGCTCATGCAACCCAGGCTACTTCAAAGAAGGAGGCTCACTCGATAAGTG
TTCGGATCATTGTCAGTTCGGAGTCGACACCTGCAACACAACTTCCACCA
CTTGCAAAGCCACTCCTGGATCTGGTAGATACTTCGAATGTCCATGTAAA
TTTGGTTTCGAGAGGTTAGATAACAACACAGACAGTTGCACACCAATGCC
AAGACCTTGCCACACAGGGAAAGATACTTGCAACATGACTACATCAACCT
GTAACAATACTTTCACAAACCCTGACTATTATAACTGTTCTTGCAGTGAT
GGTTATCTGAAACAAGGAGGTTCACTGGACAAATGTTTGGATCATTGTCA
ATTCGGAGCTGATAGCTGTGACGAAACATCTTCGATTTGTGTGGCAACTC
CTGGCAAAGGACGACACTACGAATGTCCGTGTAGATTTGGTTTTGAGAGA
CTCGATAACAACATGGACAAATGTACACCGATGCCCAGACCTTGTGACAC
AGGGAAAGATACTTGTAACAAGACACGATCCAATTGCACAAACACTTTGA
CAGCTCCGGTTTACTACAACTGCTCGTGTGGTGATGGTTATCTCAAATTC
AACAACTCAGTTGATGATTGTCAAGACTACTGTCATATTGAAGCTGATTC
CTGCAACAAAACTTCAACGATGTGTGAGGCAACTCCTGGCAAAGGACGAC
ATTATGAATGTCCATGTAAATTTGGTTTCGAGAGGTTAGATAACAACACA
GACAGTTGCACACCAATGCCAAGACCTTGCGACACAGGGAAAGATACTTG
CAACATGACTACATCAACCTGTAACAATACTTTCACAAACCCTGACTATT
ACAACTGCTCATGCAACCCAGGCTACTTCAAAGAAGGAGGCTCACTCGAT
AAGTGTTCGGATCATTGTCAGTTCGGAGTCGACACCTGCAACACAACTTC
CACCACTTGCAAAGCCACTCCTGGATCTGGTAGATACTTCGAATGTCCAT
GTAAATTTGGTTTCGAGAGGTTAGATAACAACACAGACAGTTGCACACCA
ATGCCAAGACCTTGCCACACAGGGAAAGATACTTGCAACATGACTACATC
AACCTGTAACAATACTTTCACAAACCCTGACTATTATAACTGTTCTTGCA
GTGATGGTTATCTGAAACAAGGAGGTTCACTGGACAAATGTTTGGATCAT
TGTCAATTCGGAGCTGATAGCTGTGACGAAACATCTTCGATTTGTGTGGC
AACTCCTGGCAAAGGACGACACTACGAATGTCCGTGTAGATTTGGTTTTG
AGAGACTCGATAACAACATGGACAAATGTACACCGATGCCCAGACCTTGT
GACACAGGGAAAGATACTTGTAACAAGACACGATCCAATTGCACAAACAC
TTTGACAGCTCCGGTTTACTACAACTGCTCGTGTGGTGATGGTTATCTCA
AATTCAACAACTCCGTTGATCAGTGTCAAGACTACTGTCATATTGAAGCT
GATTCCTGCAACAAAACTTCAACGATGTGTGAGGCAACTCCTGGCAAAGG
ACGACATTATGAATGTCCATGTAAATTTGGTTTTGAGAGGTTAGATAACA
ACACAGACAGTTGCACACCAATGCCAAGACCTTGCGACACAGGGAAAGAT
ACTTGCAATAAAACTTCATCTAACTGTACCAACAGCTTCGAAGCTCCTTT
CTACTACAATTGTACCTGTGAAGATGGTTATTTGAAGTTTAACANN
Run BLAST on NCBI

transcript from alignment at sc0000134:162539..180347+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011934 ID=TCONS_00011934|Name=TCONS_00011934|organism=Clytia hemisphaerica|type=transcript|length=17809bp|location=Sequence derived from alignment at sc0000134:162539..180347+ (Clytia hemisphaerica)
GAAGCATCTCTGAAGGTTGGCTTATGCAATAAAAGAGACAAGTAACGGTA AAATTCGGTCCCATGAATATTTGATACTttgcagaccggtctgtaaaata cacgtcaACAACACTGGAGTGTTCAAAATTTCAGTTCGGTCACGTgcgtg gttggtattttacagacattttcctttgatttttggTCCGAATTTACTCA AGCTGGGTTAAATTTCTCTGCACTGTGAGGGTCTAATTTAAAGGCTAATT TTGGGCTTCTTATAGGGTCCTTTTTAAATTAACTACCTCCCCCCGTCTCT GAGGAAAGGGTTGGAAGATCTGGTCCACGCATATTCTCCAACCTTAGTTC CCCTCCCCAGTTAAGGGCTCAAGGGTTATCTGAGGAACTCAATCTAAAAG TACCTCAAAAAATAGGATCTTTTCATCATCACTAACTAAAACAAAGTTCG ACTATCCTGATTATTGATCGAACGTTCATCCGATTTTACAAGGCTGTAGA TAATAATTCTATGGATAATGTAAATTCTAGTCCAATACTTTAAAGTCTAA TTACTTTAAAAATCTATtaagggggggtttcatggttggcggaggagcgg aatcggcccttttttcggacggagtggcggaatttggcgaaaatttagac ggaattacagAAATTGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaattgggttctctga cggagacggaaaattagacaattttagtgcagaaaaacggaatttagcaa aaaaatttgcggaatttcggaattggtaaaagattttcgacaaaaatatt gcNTGAGGAAAGGGTTGGAAGATCTGGTCCACGCATATTCTCCAACCTTA GTTCCCCTCCCCAGTTAAGGGCTCAAGGGTTATCTGAGGAACTCAATCTA AAAGTACCTCAAAAAATAGGATCTTTTCTTCATCACTAACTGATACAAAG TTCGACTATCTTGATTATTGATCGAACGTTCATCCGATTTTACAAGGCTC TAGATAATAATTCTATGGATAATGTAAATTCTAGTCCAATACTTTAAAGT CTAATTACTTTAAAAATCTATTAAATATTGCATAGCATTCGCAATGAGGT GCTAAACCACCTTAACATGTTTCGACAAATCCAAGATAATTATATCATTG CAGAGATCTCATTGAGGTCAGATTTGCATACAGTCTGTAGCAAATGGCAA CAATAAGCAAAATAATGCTCTGCTCTTTAAATATGGAgtccaaaaacaaa actttgatAACGGATGTATCGTTCACTTTctattcaagattttttatatg GGTTATATTCCACCTTTTGGCTGTGCCctctcaaaatttgaaacataAGA CCAAAGTTCCAGTTAAGTTAAGGCCAAAGATTATTTCCGTATCTTTAATA AGTATTTACTCGTATTCACGCATTCTTACTAGAGTCATTTGTAAGTTTAT CACGGTTTATCAAGAAAAAGCACTTATTTGAGAAAATACGACAATAagat aatatttcaaatttggtATCACTTCCCTTACTACAAGCTTGCGAAAATAC GTCAAACATTGCCGACGTTGTATAAACGTCGCAACAATGTTGTGTGTCAG CTGCGATCGGTATAATAACTCTTTTTCTTGATGAAGAATTCAAATTACTG TTAGCTTTTCCCGGAAACAGATTTGAGTCATCTAAATCCGAATTGACAGG AATTGAAGGAGGAGCAAAGTAAATGAcgaaatcaattttcttgattCACA ATTGAAATGAAATAGATCAATGGAACCAAACTTTCCGTTTTCCACAAGAC ATCTCATTTACGAGTACAATTTTGTGAACTGTAATGTCGGTTAACCTTTA TGATAAATACGGTCATGTTTTAAATCAATCATTGAATGAAACAAACTACA AGCCCGAGAGGGGATAAAATCACCTAATTTATACTTGAGACACTGCACGG GGCCCTCTtcactggcggatttaagacaatagtgCAAGTATATTGGAAAC ATGTGAAGGAGTGCAACGTTCGTTAattgacaatgaaattacaattacaa atttcTCCCCCTGATAAGTTCGAAATGGTCTAAAACCGCTTTGCTCTTAC ACCCCTTTCCTACTGGCATTCATTATCGACTATTAGGACCCGTCTAAGAT ATTGATTTGTGAACTGTTGAATATATTCTTCAACCTTTCCAGGCTAGAAA AAGACACGGAAAAAGCAAAACCTTCAATCGCATTGTTGACAGCAGATTTG ATCTTGCGGTTTCTTTGTACTCGGACGGCACATTTATCAAAATCTACagg taaattttactttcaatccatcGTTTGTATGAAAATCACGCGTACCGCTC AATTTATATCATTCCGTTCCTATATAGGAGATTCTTTTACTCCACTCAAA AAAAAGTTATCTACCTTATCGGCCTTTTTTACACCGGCCTTTATTGGCGT TACTTTTGGGCTCGcggcgtaataagggccagcgtaaaaagggccaagat tttgtaattttaacctaaaagcggcattaattttttatcattatttctca atttaaagaattttaggtatataaataagtttgcgtttatcgacccagtg atatttatattggaagtttatcgtggcttggatcacgagatttacgcttg gctacgtttcgagagattcttctcccatcatcgggcaatgtGAAAAAAAG AGACGATTCATTCCTTAAAGGATGAGAATCATATTAACAGCATTTAgcgg aattttcaacagttatTAACGGCCTtgattggcgtaagcccaaaattagg ctgtggcgtaataagtgCCAGCGTAAAAGGgaccggcgttaaattagggc cagcgtaaaaagggccgataagttaatttgataaaaaatatcaGATATAC CTGAAGccttcgagcatcttcctaATTAAATTTTCACTAAGGGAAGCATC TGTGGGGGAGGGGGCGTTCTCGTGGCTAATATCATATATTGCCGACTAGC TGGGtcgatttgattttttttatgtcatagaaaaatttattccatcgatt aaagagattcaaaagtatacacgcagttgaaattctgcatttcagcattg aaaaatgttgataaatgCATTGCAAGCttatgaaaaaattaaagaaaaca attctTTTATGAATTAcaagtaatgttcaagctctataaATTCTGTTAGC TaggtaattcaaagaaataaaattgtgacggaatattgtccGATTTTTCA TACGaaatttgaaatacaggcggcaacaaAGCTCGCTTCAGAGACACAAT TTAAGATTGAAGTCCCAGTCGTTTATGCGAGAACTTATTAGGCTAAAAAA GGAGGAAAAAGggtgtttttagaaaaaatcgGGCCGAATTGAAAGTGAAT TAACTTTAGCGAATGACCaaataatttgaatttcttctCTATACTCAAAT GGACAAAATTATTACATGGCTAGAGGAGAGTATATGTGTTGATCAAACTC CTTCAAGGGTGTTTAGAATTCGCCAACGGATTAACGATTGCGTGCGAAGT ATTTAATAAGGCGTGCTGCGCTTATTGAAATAAATCtattttgctttctt tttatgacgattttgaatttttttgcgtttAGAAAAGAGATATTCAGTTG AGTCAATTATAGAAAGTATCAAgagtatttttttgtaagaattacAAGTT GCTCAACAAATCCGAAGAGTTTGACCCAAAGTCAAAATACCCCTTCAAAG GACACCAACACAATGTCATCTCTTTGAGAATCAGAACACACCGTACCTAt acatttttgatcaaaatcgATTATTTTATCTGCAGCAAAACATTTTTAGC GCATTTCCGGGAACTATCCGCTGCTACCGGCCATACCAGCCAAGAATAAA TGCGAATATGCGTGaaaaatacatcttttcgaccgtagtcgggCAGACAG CTGCGTGTCATTTGATTATTTAATTGTCCCCTTAAAATAGATCCAAtcat ttttgacacattttattttctatgaattttgggcaaaaagactgggacgg tttcagggtggtaaaacggacaaaaaaatgcccgcgcggcgattggcggc tacggttgaaaaggtgtatacaaTATGGGggagaaaatatttcttttagc atTACTACTTAAATCATCATAAAAATgacgagcaaaaaaaaaagcaacaa aagaaaaatcgtcaataatttgttttccttttgtAATAGAAAAGGACACA TTAATACTGTTTAAGCTTCTATTGAACCAATGCCCAGAGNAAAAGAAAAA TCATCAataatttgttttccttttgtAATAGAAAAGGACACATTAATACT GTTTAAGCTTCTATTGAACCAATGCCCAGAGCAATTTCACTtgcttttca aatcaaatacaCAATGtcattttataagaatgattttataagaacaatag tgtcaattttgatcaaaacctaagaacaaatcaAGAATAGTCCGAGGCCC GGATTCGGCAAATGACTCAGAAAATACCGTTTTTAAGTCATTTTCAAGGC ccttgaatgaaaaaaatagaaGCATATGTATTATTAATATCTTTGGAAGA ATTCAGAATGAAAATAGGAATAGGTtaggttcttataaaatgtcAAATTG TGTAGGCCCATTTTATATGCTAggtaaaagaattttttgtcAAGCACGCA GCAGGCTTAGAGAATGGTGCATGAGTAATAACTTCGATTCTCTGACTCAA TTGCTTTGTTACAAAAAGAACAGTAACAGTAGCGAaccaaatagaataaa aattgatatagtttttttgttgaatttcgttGAGACACtgtttttttatc tattttggtTGACTTTCGATCACCTGGTAAAAAGTTGTCCCTGGTATCGT CGGGACAGATCTTTTGGTGttggtaatttttttctggataaTAATATGTG GATAAGTTAATGTTATACCGTTGAATTTTAACAATCTAATATTTGTTATT TTGTCATTCATTTACCGTCGAATGCTGAAATGAAATTGGCCCTGTTTATT TGTTTTCTTGTGGCCAccataatttcaaaatgtaagtattttttCGTTGG TTTTTCtaggagatttaaaaaaaaaatgtgaatttaCCGCAATAATCCAT AAAAGACaagatttgattttcaaacGTAAACGCAAgtaaaataaatcaga aaaatgAATCTTGAATAAGTTAAAAATGAAGGAACAGGGATGTGCGTTTT ATAATAAAAGCTATAAAATTTCGGCTAAATTTCAGGGGTTCTTGTTTTTA CAAAGAATTTAGGTTGTTTTAACCCCCTGTTCCAGTGACAATTTCAATTT GCAGGGAAGTACCAGGAAACTAAataaatttcatccaaaaaagGCATTTT GGCCTTATGTTCATCAAGTTGTCTTACATATCTAAAATTGTATTTCATGG CTAGACTACTGGCCTTACACGTTACTCGCCaactatttttttcttaatat cAACATTAATTCACAGCTCGGAAAGAGTAAAATGTTGATAGCTTCCTCTG TTTAATaagttttttcattaaatttgtaATAAAATTCATCTAAAATCCTA AAGTCAATGCAATTTTTATATTcttagaaattaaatttttcatagaaTCA AGACTTCGTAAATAAAGTTTCAGCCtgataaaaaattttgttaGTTTTGG CACTTTAAAGTATTATTGCATAGAAAAACCTCAAAATAAGATCATTACAA ACTTAGCTTGAAAAATCGTCTTAAATTCACCAAAAATAAGATTAAGATGA CTTAAGGGTATCAGAACAAAAAACTCAACTAATCTTCTGTCATTTTGATG GATCTATCCAAAAAGGGGTAATCAAAACTTGCATTGcaaatcaaaacttt tattatgTATCTCTCTGGAAGGCTTTGCATGTTGAAAAcgctattttttt ataagaacaatgttgAGTCCAGAATGACTAAATTTCAGGCAAATTGAtgg tcaaagtaataaaaataggGTACATAGCCTAAAAGTCTAAAAAGCCTCAG TATGCTCTAAATGTACGAACAggataaaaacaatttgaagCTTATAGTGT CAGGACAGTATTAAAAGAACAAAAGTAGTTGAGTCTCCCAAAAAATTGTA CTCGTTTTAATAAAAAGAGAGTTTTTTAAGAGTGCTTGTTAAACTTAGAG AGATTATTTCCCCAAATTTAAGCCAAATTTTTAGTCCAAATCTCAAGAAT TTATATGACCCTTCGAGGGAAGActcgatttttgattttcttaagTTTGG GGGTACAGAGACTTACAGAGACTCTTTTCAATGGTTTCCGTgcccctttg agggactttcgagtgtgtgaaaaagggaccatTTTGGCTcatcgcacata cccggcacccattttgcctaagtatctCCCGgtgatattcttaaaaattg aaatgaaaaaggaaggaaaaaaagtgaacataggatctgaaaattttatt ttcacttatttGAAATcgtagatttttctttttttccagatAAAATATTA CATACCCCAAATAAGAATactggataaaaatttctagaaTCAATATCGTC CAAATGGACTGAGGGTCccaattgaaactttcttcagcAAATGTACCGTA AAAAATGAATCCTAAATACAAATTTGCTCAACAGtttctactttttcaaa ttttccacaAAAGCGCACCCGGTGAATACTGTAACTGATTTTAATTGTTA TCGTATTTTGTGAGGAAAAATACATATAGAATATTCCAGATTCTATAACA CTTAGCTTAGCCTGGAGCATAGAAGGCAAAGGTACATTACaatcattgac ttccaagcccgaagggctagttagactcgagactcctggatgagaaataa agcaacttatttcccatccagaacgcccgcgcgtggtctttacacaaacg ccggattgaaagtaaaatctatcgatATATTTCAACGAATACAGTCATCA AAAACAAAGGACCCGCTAGATACAATCTTTTGTCGTGATTCCGGCGCGTT CCAGGCGccttctggatgggaaataaatagcttcactttttcttgcctgg aaaaggttagagattctactctactcttgtctcccgaatagacgggggga gagtccgaataagcaggggggtaggaaattttctaaattctagtAAGcag gggggatggaataagagggggggggggggtaatttgaagacatatttttt taactgatatcaatttcaacaaaaaaaaaagaaactttaacaaatgaaca cgtaaaataagaaccaatactaacaaaaaggaaaatttaaacaagtttaa ggtctatctacacggtaataaaatatcaaattattcaaatttaattagca ggggggtcttaataagagcggggggctggattatttttctcttatcaatt agcggggggacgtctattcgggagacaagagtagcccttcaggctttaaa ctcaatgatcaCAATGTGTACACTTTATTTGTAAGAACTTGTAAATTTTT GATGATGCTCTTCTTtatttggcactttgagcctaaaaTAATTCTTATCT TGTTCTCATTTTCAGGGTAAAACTTAAATGTTTTAAGATGTAAGTAGCCT TTTTCCAGACTAACTCTGAACcattattttcttaaaattccgCTATTCCG GGCTCAGCATTGTTTTTAGGTTGTTCTCGTTTTTAGTCACTTTGAGcctc ttgttcttataaaaataatgtaGCTAGTAGAATAAAAGTATTGTGCCCTA AGCACAGAACTGATACGAATTCACTTATACAACATGcatttcaatagacc ttttcataaattacgtcacgagcatcacttgcctcgtgttccaacaatta ccatggtgattatatcccttgagacattaaatgatctttttatgaataga aagcagttttaataaaatccgttgggagttaatcaccatggcaataattt caaaaaagggCAAGtaatgttcgtgacgtaatttatgaaaaggtctattt attaATAATCGACCCATTTATCGGGTAACAAGATAACccgttttttcaat tttacggATGAAAAGAGAAAATCTCAACCTTGCGTGTTGTCTTATCATCA TAATATAAGGGATGTAaaatgtcatcaaaatttcagTCTTTTAAATAAGT TTCCTAACAATAAATGGCTAACATCTGCTTTCATGGGGGGGGgatgaaaa atagaaattaaagaaaatctAATTCAATACTTCAAATGAGCTAGTATTCC AAGAGCAAGCTATACTAAAGTCTatttctggctgaactttgctttttaat accttatcggggaaaatttcgtcgggaaaaacttggccgaaatttcgtca cttttccccgacgaagttttccttGATAAGGTAAttgattttcgaatttt tttaaaagccgTAAATAATCCGCTCAAAGTTatctttcaaacaaaatatt acttttttaatcatatttACGAACTTTCAAAAGCAATGTATCAAAATTTG TGGACTGCCAAATTAAATGTCATGTTTGGAACAGATTTTAAATGTAAACG TTCACTATGCACGgacaatattttctttgaatgcattacacgcttctttt ttatataagaatggcgcttttcatttcatcatgggttttttttttttttt ttttttttgatattcttacggtattcttaggttaagatcgaaatttgcCC TAGATTTAACATGTAATACAAACCTGAAGAATATTGAGCGTTACTGGGAT GTTATTGACAATTCACAGGtgaaaatgccttaaaatggcattcttaggtt cagttgctaaattccatgatggtgatattcttaccatattcttatttttg gccattttcatcatgggtattcttatttttaaaaagcgtGTACATTTAAT ACCTCTCTTTACTTTAAAAAGCCATTTATCAAAATGATAAGAAGTTTAGG ATTCAAAataacctctataactcgaactcgATAACTGAAACATCTCGAAC AAATTAGTGTTCCCCATTCGTGTTTAAGGTTATGGGGACTCCACTGAAAA GgtcctttttttattgaaagggaTTTCACATGGGACCCTCTTCGTAATGA GAATTCAGGGTTTTAAACTGCTTGCGTCCTAAATCGGATTCGGGCTCCTT ATACAAACTTTTCTTATAAGATAGTTGTTTTCCCATACCACCTTCCACCA TGGATATTCTTATGATATAAATATTCCTGAAATCTTCTAAACGGTGTTCC ATACCCAGCTTAAATTTACAATGTAATACAGTCGACTTTCggtaattcga actcgaacaggGAATcctatttgttcgaattacagagagattcgaattat agaaagtatatcaAGAAAGTTTCNACGAACGGGGAATcctatttgttcga attacagagagattcgaattatagaaagtatatcaAGAAAGTTTCTCGTT GACGGGGACTGAAAgcaggttcgaattatagaaatatttaAATAATGAAG TTCGAATAGATGAAAGTTTTCTGTACTTTACTTCAAGTAAAATATAGCAT TTTCAGGTTGATTCTATGATGTTGATgttgatattcttagcatattctta atttttgaccaattttattATGAACATTCTTAtagagtatattcttataa caaGGCGTGAAGTAGCTGAGGTTTTTTAGAGatctgtgattcagactaaa AGGGTTTCTTCTGTTACGCAAGCAAATTGCGCCGTCAAAAATGGTGCGTT TCCCCGGTCTGTTCAATAAACACTTGACTCGTATAATATTTTCTTGTTCT CGTGTAAAAGTATcatgaaaaaaatgtataatatgACTCATTCGGTATAT TACACCATAATGTTATGATCTGACAAAAAAACGTAATAGCTTAATATCTA TTATCAATTGTAACAATGTTATACAAAATAAGTTGTTTTAATTAGACCCG CTGAgtcaaataaaatcaaaatgagaaTTCCATAgagtattaaaaaaaat atactgTAAAAATGGTGCAAAACTTGGTTTTTATGTAACCCACAAGCTTT GTAAAACTTGAGAGAAATAGAACTCCACTCCCAGGtgtcttaaaggtttt attcttacataagtgttcccgtttcatatcagacacatatttcatatcag gacagagTCTTCTTATTGTttatgttatgctgatataggcaagaaaatgt tttcttttcctattttgatcaatcttgctccacatctgtgtcaatccaat gtgaaaaggcctgtaaatcaaaattgatgagtaagcaaacgataaaACCC TAACCGACGAGATAGCTTATCGGATTATCCAGGCCCAGCGGAAGCAGGGA GATTGGGAAGACTTCAGCTTCCctacttttgagcaaatgagatttttttt tctcgaattcctagcaaattttatctcattttgagccttcagcctcccca cttttacggttttTCCACCGGTTCTGTTATCGCAAAAGTTAAAAATCTAA ACTGATTCTATCTACCCGTTTTCAGGTCACGGCATCGATTTATTTTGTAC ACCAGACTCAATGACAATCACTTTGGAAATGAATATCGATCCAAAAGTAT ATAGCACCTCAATCGTCAAATTCGAAAATACTAATTGTACGGCAACAACA AATGGAACACATTTCTTTATTACGTCACAATTTAACGAATGTAACACACA AATCGGGGAAACAGTAGATGATATCGTGTTCTCAAATCGGGTTATTGTGG ACCCGAATAATTTAAAACCGGACGCGATCATTCAGCGGTTGGAACATACT GAACATATTTATCCAGTCAATTGCTTGTTGAGGAAGGAAAATGTGGTGGT AACAAATACAGGATATAACCTTACAGGTAAGACAGTCTTGGATATCCCGC GATTACAGTTCAAAGACAAAAATGTAAACTGCATAACACCTGGGTGCGTG GTAAATGTTATCTGTAAAacaatactctcgggtacctagtTTCCAAGGTA CTTTAAAGACATTCTTATCCCAACTACTGCATCAAATTTTTTAAGTAATA ATAAATAAGCCGTAGTAATTTGTGCTTAGTTTCGGAGGTTTTTATTCATC CaaatttttaggctgaaaagttcttaaaatatttttaatacgACAGTTAT ATTCTTTGTAACCTTAAGCACTTTTTACACACCAGTCGTTATAAGCTCCG TTATTTTTGGCTTTGACGGATTAAAAACCGACGTAATACAACGAGTGTAT AATATCATTTTTGAATCTGAggctaaaattgttcttaatttgttcttatt agGTGACGGATGGGAAGAATGGGGAGCGTGGTCAGAATGCACCAAAACTT GCGGAGGAGGAACAACAACTAGGAAGAGAGATTGCCGTGTATCGCGTAGA GATGATCTAAATTGTCCAGGATTGGAGGTCGAAGTTGCCCATTGTAATAA TGTCACTTGCCCATTGAGTAAGTGTCCACTTTATTCAGAATTTTTTGACT ATCTCTTTCCCGCTTAGATCTTCACAGGGCAAAGAAATATCTTTGAATAA GAATGATTCGAATTACGGAGATTTTTTATATGGATTTCAAGCTGAGGGGA CCAACGCTTtagatcgaattaaagagaggtTTGAATTCTAGAAGTTCAAA TTAAAGAAGAGGACTGTACAGCTTTGAGGCTGTTACAGGAACAATCGAAT CACTGATCCAATACCAAATACTACAGTTTTTTTAATTACTGTTCATAATG CCTGGAACCTTACGAAATTGTTCGTAAAGGGATAAGCtaataaaaagtaa aacttaGCTCAAAGATTGCTCCCAGTCCCATGGTCCTTAGTAAACACATT CTGAGGAACATATGACTATCTAAAATCACAAATTTCNCACAccgttggaa aggaaatttcagaCCGAACAACTTTTCTGCTTACGAGAAACGATgaaaat gtactcaatgtgactcaaaatgaaaaatgatgacgtcatcattttcactg ttttaattttttctctaaCCATATACACGAGACGTGTATCATATGAAACA GGAATCTGAAATGAAATCTCTAACTTTTTTTGACTCGccaatttcgccaa aattagttctcgtcaaaataagttcccttaataTTAATGAAATTAATTCC ATTTTCTCCCATACAGCATGCGACGATATagaatgtgattttttcaatca TGAAGAATGCGAACCACATTATATCTTTCAAAATGCAACGTGTGAATGTA TGAAAGGCTGGTATGAACTGGATGACGGTACATGTGACACAGAAGAGAAA ATAGTTGGAGTACAAATCACCTTGGGATCTGATTTTCAAGATGAATTTGT GTCATTTAAATCGAACATTACATCAGACTTTAAATCGAGGTAAATAGCAT ATAattaaaatctgttctgttCGTGGCCCTTCGTGGAAATAATTCCTCAG CTGTCTAAAAGCTGTTGAATTTTTCGAAGCATGCCACGTAAAATATTTgg tattgttattattattattattaaaatctTAGGATGCCATTTTGGGGACC ACCGAAAACCGACCcatagagagactgatttttgctgaaaaggtgaccct tagagagactttttgaaatgttttttttcgatttttgaaaaaagtcatac ccttagagactttattacaattttttctctggaaatcaaaaaatttccta aaaatcctgaattttcagacccttagagagactaatttaaaactttctga tttttccaacccttagagagactttgaaaggtcaACGAGGCCCACGATTA TCAAAATTGCTTCGACAATTTGAAAGAAAGTATCAAATTTAGACTAGATG CTCTTTAGACCTTAGAATTGATATTAGAATATGTGAcctattttttgatt tgaaagcgTAAAAAGGGtctattttgaaagtaaaaatttcGAGCCCATTT TAGGTATATAGGAGACTTTAAGGCGAGTATAACCGATTTCGGAATTGAGT GGGAGTTAAACCTAATGTCGAAAATTTAAAACCTCATCTTACTCATAACA TTTCCTTTTGTGTTACCTTTAAAACAACAACTTTTCATTCTCACTTTTAT AGAATCGAAACACAATTTACCCTACAACTGGGGCTTGTACCACCAGAACG TTTTATGGTTACCGAATTTTCCGCGGGTAGTGTGATTGTGGACGGCCTGG TCATTCTTCCTCGAAACACaacagaaaacaaaacaacaattcAAGAAAAA CTGGTGACTGAGTTACAAACGAACACGACCGGTTTATTGGAAGAATTTAA TGTCACTAAAATTAATAAAGTTAATGGTGAGTTTCTCGTTAGTTtcatga ggcccccccagcggtttgcgtgatggcgtaaccgggacttttttcttgcg tgatggcgtgattagagattttttttggcgtgatggcgtgatcaagattt ttggCGTTATGCGtaatagggcaaaaatttgatgcgtgatgcgtgatttg ggctattaaatcgctattttttgcgtgatgacaaattttagcgattttcg taatgcgtgatggagaaaatttttttgcgtgatggcgtgattaggggtgc cgctgggggccTCTTTAATAGATATCATATATACAACACTACAATCAAGG CCATAATATTTGACAAATCTTATAgtcacaaacaatttggaagcggTCTA AGTTAGGTTGGATTGAAGTATTATGACAcataaagcctaaaaatgtcctt aaattgttcttaatgttctggccatcgaagccttattttcttacatagtt tattcttataaaaaatgcataTTTCTTCATCAGAATCTAATCTGTAGTCC ctcttattttttctttggaaactcaaaatttttgagCGAACAACCAAACC ATGTCCAAATGATGCACTGATACGTCCGTCAGAATTTAAAGATTCTggtt ttaaataagagtgatgcTATCGTTTGCTtcctcatcaattttaatttata agctTTTTAAGGAGCAATATTGgctagaaagaggaaaaaaagattatttt gtttatgcagcacaatataacaatagggagacaccgtcctgatatgaaat atgtgtctgatatgaaacgggaacaattaccatgcaaaaaaaaaacaact ttaatctccatttttgattttagaaaCCTACATTTGCGAGCTTGAATCAG ACACATGCAACCGAACGCGATCAAACTGCACTGATACACCAGACCTCTTA ACTCATTATCAATGTGATTGTTTTGAAGGCTACATCAACAAAACCGTGTA TATCTGTCAAGATTATTGTGAATATGGTATCGACACGTGTAACAATATAT CAACTGTGTGTAGAGGAACACCAGGGGTCGGTCGCCATTATGAATGTGAT TGTGCTTTTGGTTTCGAGCGGTTAGATAATAGTACTGATACATGTACACC AATGCCTCGACCATGTGATAATTCAACAATGAACACGTGTAATAATTCAA CATCAACGTGCATCAATACCTTTACGGCACCCATCTATTATAACTGTGCT TGTAACGATGGTTACCTGAAGTTTAACAACACTGTTGATCAATGTTTGGA TTATTGCGTCTCAAATAACGATACTTGTGATGATAACACGACAATGTGTC GCGCAACACCCGGCGACGGACGTCATTATGAATGTGACTGCAAATATAAA CACGTAAGGCTAGACAACAACACTGACGCCTGCACACTAGCCGATACTCC ATGTGCTTGGGGAAATGATACTTGTGATAAAGATATATCAACATGTATCG ATACTTACACGCATCCAAACTACTTTGACTGTAACTGTTCAGCCGGATAT GTCAAACAAAATCATACGACATGTTTCGACTTTTGCGTTGATAACTCCGA CACATGTAACGACACATCAACGACGTGTTTGGCGACACCTGGTAAAGGGC GGCATTACGAATGTCCTTGTAAACATGGATTTGAGAGACTCGATAACAAC ACGGACTCATGTACACCGATGCCAAGACCTTGTGATACAGGGAAAGATAC TTGTAACAAGACACGATCCAATTGCACAAACACTTTGACAGCTCCGGTTT ACTTCAACTGCTCGTGTGGTGATGGTTATCTCAAATTCAACAACTCAGTT GATGATTGTCAAGACTACTGTCATATTGAAGCTGATTCCTGCAACAAAAC TTCAACGATGTGTGAGGCAACTCCTGGCAAAGGACGACATTATGAATGTC CATGTAAATTTGGTTTCGAGAGATTAGATAACAACACAGACAGTTGCACA CCAATGCCAAGACCTTGCGACACAGGGAAAGATACTTGCAATAAAACTTC ATCCAACTGTACAAACAGCTTCGAAGCTCCTTTCTACTACAATTGTACCT GTGAAGCTGGTTATTTGAAGTTTAACAGCTCCTTGGATCAATGTCATGAG TATTGTCGTATTGAGGCTGATACCTGCAATACAACCTCTACAACTTGTAT GTCTACTCCTGGCAAAGGACGACACTACGAATGTCCATGTAAACATGGCT TTGAGAGACTCGACAACAACATGGACAAATGTACGCCGATGCCAAGACCT TGTGACACAGGGAAAGATACTTGTAACAAGACAAGATCCAATTGCACAAA CACTTTGACAGCTCCGGTTTACTTCAACTGCTCGTGTGGTGATGGTTATC TCAAATTCAACAACTCCGTTGATGATTGTCAAGACTACTGTCATATTGAA GCTGATTCCTGCAACAAAACTTCAACGATGTGTGAGGCAACTCCTGGTAA AGGACGACATTATGAATGTCCATGTAAATTTGGTTTCGAGAGATTAGATA ACAACACAGACAGTTGCACACCAATGCCGAGACCTTGCGACACAGGGAAA GATACTTGCAATATGACTACATCAACCTGTAACAATACTTTCACAAACCC TGACTATTACAACTGCTCATGCAACCCAGGCTACTTCAAAGAAGGAGGCT CACTCGATAAGTGTTCGGATCATTGTCAGTTCGGAGTCGACACCTGCAAC ACAACTTCCACCACTTGCAAAGCCACTCCTGGATCTGGTAGATACTTCGA ATGTCCATGTAAATTTGGTTTCGAGAGGTTAGATAACAACACAGACAGTT GCACACCAATGCCAAGACCTTGCCACACAGGGAAAGATACTTGCAACATG ACTACATCAACCTGTAACAATACTTTCACAAACCCTGACTATTATAACTG TTCTTGCAGTGATGGTTATCTGAAACAAGGAGGTTCACTGGACAAATGTT TGGATCATTGTCAATTCGGAGCTGATAGCTGTGACGAAACATCTTCGATT TGTGTGGCAACTCCTGGCAAAGGACGACACTACGAATGTCCGTGTAGATT TGGTTTTGAGAGACTCGATAACAACATGGACAAATGTACACCGATGCCCA GACCTTGTGACACAGGGAAAGATACTTGTAACAAGACACGATCCAATTGC ACAAACACTTTGACAGCTCCGGTTTACTACAACTGCTCGTGTGGTGATGG TTATCTCAAATTCAACAACTCAGTTGATGATTGTCAAGACTACTGTCATA TTGAAGCTGATTCCTGCAACAAAACTTCAACGATGTGTGAGGCAACTCCT GGCAAAGGACGACATTATGAATGTCCATGTAAATTTGGTTTCGAGAGGTT AGATAACAACACAGACAGTTGCACACCAATGCCAAGACCTTGCGACACAG GGAAAGATACTTGCAACATGACTACATCAACCTGTAACAATACTTTCACA AACCCTGACTATTACAACTGCTCATGCAACCCAGGCTACTTCAAAGAAGG AGGCTCACTCGATAAGTGTTCGGATCATTGTCAGTTCGGAGTCGACACCT GCAACACAACTTCCACCACTTGCAAAGCCACTCCTGGATCTGGTAGATAC TTCGAATGTCCATGTAAATTTGGTTTCGAGAGGTTAGATAACAACACAGA CAGTTGCACACCAATGCCAAGACCTTGCCACACAGGGAAAGATACTTGCA ACATGACTACATCAACCTGTAACAATACTTTCACAAACCCTGACTATTAT AACTGTTCTTGCAGTGATGGTTATCTGAAACAAGGAGGTTCACTGGACAA ATGTTTGGATCATTGTCAATTCGGAGCTGATAGCTGTGACGAAACATCTT CGATTTGTGTGGCAACTCCTGGCAAAGGACGACACTACGAATGTCCGTGT AGATTTGGTTTTGAGAGACTCGATAACAACATGGACAAATGTACACCGAT GCCCAGACCTTGTGACACAGGGAAAGATACTTGTAACAAGACACGATCCA ATTGCACAAACACTTTGACAGCTCCGGTTTACTACAACTGCTCGTGTGGT GATGGTTATCTCAAATTCAACAACTCCGTTGATCAGTGTCAAGACTACTG TCATATTGAAGCTGATTCCTGCAACAAAACTTCAACGATGTGTGAGGCAA CTCCTGGCAAAGGACGACATTATGAATGTCCATGTAAATTTGGTTTTGAG AGGTTAGATAACAACACAGACAGTTGCACACCAATGCCAAGACCTTGCGA CACAGGGAAAGATACTTGCAATAAAACTTCATCTAACTGTACCAACAGCT TCGAAGCTCCTTTCTACTACAATTGTACCTGTGAAGATGGTTATTTGAAG TTTAACANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006702XLOC_006702Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011934-exon-sc0000134-1491911889:162539..162585TCONS_00011934-exon-sc0000134-1491911889:162539..162585Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1510915933:162539..162585TCONS_00011934-exon-sc0000134-1510915933:162539..162585Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1575043694:162539..162585TCONS_00011934-exon-sc0000134-1575043694:162539..162585Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1491911889:173164..173514TCONS_00011934-exon-sc0000134-1491911889:173164..173514Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1510915933:173164..173514TCONS_00011934-exon-sc0000134-1510915933:173164..173514Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1575043694:173164..173514TCONS_00011934-exon-sc0000134-1575043694:173164..173514Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1491911889:173941..174105TCONS_00011934-exon-sc0000134-1491911889:173941..174105Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1510915933:173941..174105TCONS_00011934-exon-sc0000134-1510915933:173941..174105Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1575043694:173941..174105TCONS_00011934-exon-sc0000134-1575043694:173941..174105Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1491911889:174805..175027TCONS_00011934-exon-sc0000134-1491911889:174805..175027Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1510915933:174805..175027TCONS_00011934-exon-sc0000134-1510915933:174805..175027Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1575043694:174805..175027TCONS_00011934-exon-sc0000134-1575043694:174805..175027Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1491911889:175741..175964TCONS_00011934-exon-sc0000134-1491911889:175741..175964Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1510915933:175741..175964TCONS_00011934-exon-sc0000134-1510915933:175741..175964Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1575043694:175741..175964TCONS_00011934-exon-sc0000134-1575043694:175741..175964Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1491911889:176812..180347TCONS_00011934-exon-sc0000134-1491911889:176812..180347Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1510915933:176812..180347TCONS_00011934-exon-sc0000134-1510915933:176812..180347Clytia hemisphaericaexon
TCONS_00011934-exon-sc0000134-1575043694:176812..180347TCONS_00011934-exon-sc0000134-1575043694:176812..180347Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000134supercontigsc0000134:162539..180347 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.08162 6.26015 2.36509 1.61922 15.9832 8.30785 2.79602 3.56226 3.99728 6.63937 3.94602 5.85416 0.192881 0 0.224613 0.314811 9.70016 10.5197 0.416323 0.315432 15.7171 12.7506 2.71564 7.38574 8.42473 10.6159 2.41031 1.36518 0.570867 0.386486
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011934 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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