TCONS_00011915 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011915
Unique NameTCONS_00011915
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1022

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011915 ID=TCONS_00011915|Name=TCONS_00011915|organism=Clytia hemisphaerica|type=transcript|length=1022bp
CGGCGACTTATCATGATGTTACTGGCTGGACCGCTCGATGCGCTGctaaa
aaattgtaaacaaaacaaatggCGGCCAAAATTTGAAGaaaataaaatct
cAATAATGGGGAAGGGAAGAAATGCAAAAAGTCTTCCAAAATCAAGAAGT
CATGACAAGAAAAATGACAAGAGCTCAAGCATCGATATTTCATCCCTTGG
AATTGATAAATACAAGATATTTGTCCTTATTTTAGCTGCAATCATTGGCT
ATCTACATAGTCAACATGTTTATGGGATGTTTGAACAACAAAGATTCTTC
TCACATCTCTCAACACTTGAAAGAGAACTCTCTTTCAGAACTGAAATGgg
aCTTTATTATTCTTACTACAAAACAATGGCTGAAGCACCCTCTCTATATG
ATGGATTACATGATCTTGTTAGATGTAATATCACGGAATACCCAGATAAA
GTTAATGTTTTGCGTAGATTCAATCTTTATCCTGAGGTTTTCCTTGGTAT
GGCATACAGAGCTTACAACTATGTGAGCAGTGTTATGAATTGggaaacaa
agaaatgttataGTATCAATCGAGGACAAGGGCTATCACCTGTTGAAAGC
TGTGTTGgTTTGGGTGATATCGCTCATTTTTATGTTTTCCCAATCTTTGG
ACTTGCTGGATTTCAAATGGCTGTTATTTTCATTCTTGGATGTTATGTAG
GtggTAACATTTTGGGTGGTGTTTTATCTGTATCTTCATTCTTCTTCAAT
CATGGTGAGGCAACAAGAGTTATGTGGACGCCACCTCTTCGTGAAAGCTT
TTCATTTCCTTTCCTGATGGTTCAAATGTTAACAGTTGTACACATCTTAA
AAGTACACAAACCAAGCGTATTCCATAGCATTTTATTGGCAATTACTACA
GTCTTATTCATGTTGCCGTGGCAGTTCGCTCAGTTTGCCCTCCTGACTCA
AGTTTGTTCGTTATTTGCATTGTACATTCTCAAGTTCATTGATTCTAAAA
GAATGCTTGTATTCCTCAACGG
Run BLAST on NCBI

transcript from alignment at sc0000134:50958..68415+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011915 ID=TCONS_00011915|Name=TCONS_00011915|organism=Clytia hemisphaerica|type=transcript|length=17458bp|location=Sequence derived from alignment at sc0000134:50958..68415+ (Clytia hemisphaerica)
CGGCGACTTATCATGATGTTACTGGCTGGACCGCTCGATGCGCTGctaaa
aaattgtaaacaaaacaaatggCGGCCAAAATTTGAAGGTACACGTTTTA
CAAATTCCAGCTGaggttttgttattttttgaggaaatttacACTTATTT
GAAGCTTGATACATGAAGTTCTCACCTgattaaatattcaaaatcacAGA
AGCTTTGATATACTGTAGGGTAGGTCTTTCAAGCTCTTAAAATAAAGCAT
GGATGGGGAGAAAAATggtataaaaattttattgctaAAGTGTGAAAACA
AATACTCTTTTCTAttcttctttttgtcattttatcattacTATGTATTC
ATGAAATGATATTTTCAGTGCCATAGGTATGTAAAAGATTCTTTGTTATT
TGGATAAAATATTGAGACTGACAGGTGCAGAGCCGGATAGGAAAGAACAT
ATTACGTATATAAGCTTTAAAATGTAAGTTGAATTATGTAGTGTAGTTGA
CAAAACTgagaaattaaaataaatttatgaAGTTCATGggttagaaaata
taaaatttgattGCTGATTCTTAAAAAGTTAGTTCTTTATATCTAAAAAC
GGAAGAAAGAAGTCACCTGTTCCTAAAACAACATACCATACCAAAATGAC
AGAAGGTAATATACATTCTTAATAATTCTGTATTTatgtcaaaaatttca
aaaactagcAGTCAGCAGTGCAGTGTagtccagacccgatcaatcgaact
tttgtcgaaccaatcgaacaatcgaaagGTGCCgtgccgtggtatagtgg
tagtcgaccttggcttctgcaGGAGGCCAATGTTctattcccactcacgg
cagtggTGATATGTCACATGTTCGACAACCCATTTGTTCGACAACTcact
tgttcgacaaattcgtaaaattgtcgaacaagtgggttgtcgaACAAATG
GGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTTCGACAGTGTAGATGGTCG
ACAGTTTGTATATTACCCTGTACCCTGTATTTCACATAAAATCGTAGCCT
ATGGTTTACCCTTTTCTGGCTcccagaaattttcttccgacacggtAAAG
CTCTGAAGAGAGGCCCGTATATTAGAGTTAGAAAAgttcgagttagcaat
tttcgagttagctaaattatgacgtcataaaaatttaaattatgaCGTAT
ACTCAATTCTAActggatttttcttttccaaaaaagatttttcgagttag
aattatctggaatctttttttttcgcaaaaaaaattttcgagttGGCTaa
cttggattttttttcacaaaacctttttttgagttagttaactaggaatt
tatttttCGCGCACATGTTTTCAAGTTAGCTATCTTGGGAAAGATTTTCA
CATCTGAAAGGTTTAGATTATggaattttgcaagactgcgtaaaggattt
tgcagcgaggagtctggtaacccagcaacctcgttccctgcgtattatta
gctttttatatgcttactgataacacacccccttctcacagccacagccc
cactgggaacccctcccactggaaaaattgtccaaaatatcgtccccagt
gggaaaTTAACCCCGATTTTTTAtttccccattgaaaataatcaaataat
ataatgtcagatcttttgttttatgacgTTTTGTTTTAAGAAATTCCCCC
actgaggtcctataaattaacctttgtcggtccgccgtccgttcgttcgt
ccgttcgttcgttcgtccgtctgctgttaccagcttttctcgagattggc
tcattagttttttctgatttttggcaaaactatgcaaaatggcaatgccc
aaaatgtgacagagcccaattttcggaaaaacttttttccggccgaaaat
gccggaaatatgccggaaaaaccattttctgattttttgaacaaagatgc
gCAAAACATTGCCGAGTACATTGCCGAGtaccatttttgagaaaaacttt
tttccggccgaaaataccggaactttctaaaaattgccggaacagccgat
tttcgccggaaaaacgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNgttttttatgattttttgcatgcacaa
agatgcatattagCAATGTCCAAatcatggccgagtccgatttttgagaa
aaattcttttccggtcgaaaatcccggaaatattccggaaatcgccattt
ttgcagattttgatCAGACTTtatccttatatttcgttgcttttttcata
gaaaattattatcaatgGCAATGCCTaccatggttcaattgtcaattaaa
ctgatttttgaagccggaactttctaaaaatcgccggaacagcctatttt
cgccggaaaaacggtatttcttgaatttctcgagctgtacttttaTTCTT
TCACGaaattgatgcaaaatggcaatatccgGTATAAGATATTATAATCG
TCAACGGTCACTGCAGTGAACGAAGCGAAGCGACCTTTCAAATCCGTGCC
TGTCTGAAGTTGAGTCCAGTGCTTTAGCATGTTACAATTTTGAAGATATT
GCACTGCAGTGTAATTCTGTAACGTCAGATCTTTTGTTTATGatgctttt
tttaataagtttcCCCACTGAGGGGGAAACTTGCTTCTATCAACACAACA
GGGTATTCTTAGTCAATTAGATTAGACTAATGTAAATAAaacctggaata
cacggggatgAGCTTGGTAACCCAGGTATTGGCAGGTCCAACCGTAATAT
TTTTTAGCTTTACGCTCAAGCTTAGTTGCACCAGTTGCACATAAAAAGTT
GACTATCactcattcctctccgatgggaaattggccagTACATACACGAG
AGGATTGGAAGAGTATTCCCGAAAtaattttttccgagttaataAAACCG
TTTTACGAAAAATCAGACTTTTTCCGAGTTATGACCTAATATCTTGAATT
TCGGAATTGGACATTCCATAACTATAAGCGTTAATgcgtctagcgttaaa
actcagagctaAAACTCTACACTTCGAACCtcctttagagcacttacaag
tAGATTGCGTGGTTTTANggcagttcacttggcaagtaaatgttccttcg
cccgggtcaaccctagcctggatatccagcccgtaaacttttttcttgat
tttgatatttcttatgtttacggtctggtttacctagatcgtctgcattc
ttatctgaggatgattatgcggatattcttattggttggtccaagcgaat
ccgagatctgaatggtggcgcgcgtATAATATAAATTATGCGAGTACgcc
taaatatttaggtggACCGCGCGGGCGATCAGNAATTTTTTATTCGATAg
ttgctaattttttttctcccgtcggcaaacaattttcaaaatgttgcaaa
acattcggcattttaccaatttgccgtctagcccgtgtccacagtgttaN
TGGACCGCGCGGGCGCGATCAGCAAGGCGCGTaccctgatttttcttttt
cgaagcaaataacaatagaatagcTAATtatatctcccttgggtgtttga
ccacgcatccaaataaaaataacaataatggtagggaagaagtgtgaaga
tcaaaacatgggaatttttagatgttctggttgttttcttttcaattact
tacttagatattcttgttttaatcttcttaatgacttggtttAGCAattc
cagaagatttttcaagttttaatttttttttcaaaatctatcctatcttg
tagagctttgaaaaagaaagaaaatgaggggtcNttggttgcatcgtgta
aagaactaaaggtatctctttattttgcttcaattcttcttttttgtttg
ccaattttgtattgctgttttgggttggattttgaagaaaaaaatttctc
caaaaatcactttgcactttctttctgtctaacagactttccaccacact
gtctatattttatggtaaaggctgccattctaaattgatttatcactgct
ggggtaccatcttgaaattatgcatgtNNNNNtttagtgtcaaaaatttg
actaaaaatgtcaaaaaaaaggttaggaaaacagcttggaaaaatttgaa
aaatgtgtcaaaaaagaaagaaaaaaaaattttccagtcatgcttcttaa
attttgcatatctctttttttagtgtagctagagacctcaaatttggagg
gagaattctttgatggtgttaaaatattattatataaaaatatttgtaaa
atgtttagtatatttatcaaaataacgNattttttctaaaattttgagct
tggatatccaggctagggtcaacccatgccatgtgaggggaatagacctt
tttttaaagaggcagccatgttgaataattatgtactccagcataaaaac
aatgatacagccatgcataatttttaaaatatgcatgatacagtaattat
gcatggctgtatcattgtttttatgctggagtacatatataattattcaa
catggctgcctctttaaaaaaaggtctactgGGTAGttagttcaaggtgc
tgacgggacgctcattagtaagcgtctatagttgcgagaataggcctcta
aagcctcctgcaactcaaccaaatagaaaatagaaatagaaatcaaattt
tAGAATCTAGTGACTATAGTGCAGGTAGAGCAACCGGCTACCGTGCGCAA
AGTTTTGGGTTCAACCCAGCTGGGTCATagcaaagatttccaaaatggta
cttaatgcctttctgcttgatgctcagcaactaagagaaggatcaagggt
ttTAAGCAGTCCTTCACAGATTgccatagcctggatatccagaccgtaaa
ctatttcaccgtctggTTTTTTAAGATCatgtttctggtttacggtctgg
tccaactaactcgtctgcagggatatttgtCCCTGCATATGGGAGTGCAT
CTGATTGGCCAATACGTGGCCCAGTCACTGATCAGAATTTCCGTGGGATT
TTGTATGTTTTTCTATGCGtgtgcataatttatggaaaaagctgacctcg
caaaaaaagataaacaaatgaaaatgaaaacgcaggttcatttctaaacg
aAATGGCCGCTGGAAATGAGCCTTCATAAATGTGgatgatgttttgatgt
agtttaaagtagttttgaaagtttgtaaaagagCTTTTatagtaagttaa
ttatgtgtgtctgcctgggttatCTGCCTGatattctgtcaacaagggtt
tactCACAGGCactatcaaacaaactgtacccaacttttttagttgcacc
aaaCTCTAAGATTTTATTGTATGatgaggtaagagtttttttctaaaatt
ttgagtctaGATACCCAGGCAAAGTGTGCCATAGAGTGCCACTCAACGTc
cttacaaaagttgtctttttttatttcccaagcattcgtctcaagcgttc
acttccacaataatttatgtagtTGCTATTTCTGTCAGTCCACAGTCAGG
TTCAAcatataccttattggtatatattttcgcgtgttacaaattttcgc
gaatcgcgaaattttttcgaaaaaacgtgtttcgcgtgtattaaatttcg
cgattgccgacTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNtttgaaaaatttaaacagtatcaa
atttcgcgaaaattggccaaaaaactcgcgaaattaagtacccgcgaaaa
tttgtaacacgcgaaaatatataccaataaggtataaGCATGTTTTTATT
CACGTggccgaagtgcctactaaaacaatccgggggtaagtggcgaagca
acatagcagattattcgtaaagtaaagaaatatctttttgcattgacaat
caaatataacaTATTACATTAtcatttccttaattcaaaaatcaaaaatt
cattttgcaatcgcgaaaaaataaaaagatgaattaatattatatatata
CATAATAAAACGCCCCCATCTTTTACTCTCATCTAATTTCCGATCTCGAG
ACGTGCAAAACGCCTGTCCGCCTGAAaactatgaatttataataattata
aaagacaaaaagtttgatacttcattagtgaaataatcaataaattccta
gtttcaattttcagtggcaCTGTTCGTACAggttcgtagactagtcggaa
tgtACCTTCTTTTACTCGTGGGATttatggtaacttttcatctttgttat
tttcaaaataaagcacAACCGACAAAAAATGAAGCTTCAAAAAGTTACTT
ATTTCCAGTCAGTAAAcaattctgacaattaacaaaattgatatgCTGAT
GATTTTTtaggtcaggcaaatgtcttgTATcaggggttctagtcttgacc
cctaagcctacgcgagattgaaggGTTTGGTTAAACAagacaaaacttga
aaaaagctggtgttttgaagtgCTTCCGTATGATCGAAATATCGCTCGAA
ATCGAAATTGTGACGCACTGTTAAGTggagggagaaagagtggcaccctc
ccctaccttcggctagatactgtgagatcgggtaacttgcatcagtggag
gctaacatgcatagacctcaaatattaaaatacaaagttttgaaaaaaga
atttacctATGAAATTTTAGCCAATACGTTAAGGATTTCCTTAACGTATT
TCTAAGATAATTTCTAAGAGTTGGGTTCATTATCAACATGATTAGCTAGC
ATAGCTAGCATGATTTTTATCTGGTGTGATTGAAATCTGAATTgctaaaa
aaatgagaaaaattgaccaaataaAATTgcaaacttttcttctttttatt
attattaagaAGCCAATGACTTTATTGTCTAAATAAGAAAGTTATATTTC
TTTTGGATAcacaattgaaaaataatattatatataAGTAACACAGCCAA
AATGCATTTTGATACATTCACCATTCATTTCATGTACAGTATTCAAACGT
GAGGTGAATTGCTTCAAAGCCTTATGAATTTATTTCacattactttttgc
ttaatttttcttccaaaaagtgTTGAACTAGGTTCGACCTATGAGACAGG
GCACTGTCTTGGATGAAAAGACTtttttgataggtcgattttcaaaaatt
tcgagCACTTTCTTACTGTATTTATTGAATTAaggataacttttgatcta
atgaatcgaatttaataaatgacccattaAAATTTAAGTTCTATCTTTCT
TCTtcccaatgaaataggaatagttcttttaagatttttagatttctaga
aaattagttttaaagagaaaaCTTTTTTGTGACACACCCGGTATTTTGTT
GTGACCATAAATTTTATCATATACGTgtcattattaaatatttcatccAG
TTTCATCAGTTCATGTTCCAGCATTGTACATTTCATCATCATACGTTTAA
CATTAAACATTTTAACATCATTTGTTATCTCATTATGCACTTTAACATTT
TACCTTCAACAATACCCTTGTCTTTGTGACCCATTGCGATCCACTCCATT
GGCCACTAGATTgaaaaatccttccaaagattgCCCATTTTTTACACCAC
CACAAGATGAATAAGCACACTTAACCTTCCTCCTGACCTTACCCCTGATT
TTGTTCCTTAATTCTTTGGTTGTTTTTAGTATTCATAATGTCTGATCATG
CTAATGTTGTAAAAAATCTGCACAAAAGTTTGAGAAATGAATTCAAACAT
GGAATATCTGAAGATGAAATTTGGGATAAACACATCCAGAATAAAGAATC
CCTCCAAAATTATGCAGAATCGATGTGTTCGTTGGCAAAGAATTCATGGA
GAATGGATAATAATAATAGAATCAAATGGTGTTTAGCAACGATTTCATAT
TATTATGAAGGTGGTCTACTCAAAGTCTTGagaaaagaattaaaaacaaa
gaagtttGAAGATTTACGAAGTAATAATATTGAAGAGTCTCCTGAGGAGC
ACCAAAggattaattttgagattgaaaatacagtttttgaaattgaagac
ACAAAGAAATTACTACTAGATGTTGGGAGTTGTTATAATCCTTTCGGAGA
AACTGTAGAATACACCAGTATTGCAATCGATATTGCACCTGCCAATGAGG
ATGTCATATTTTGTGAtttcttgaatttgaatttttctgcTGTGAATGAA
GCATACACTCAGATAGATGAcattaaaacaaatttaaagtCTGGAAGTCT
GTTGACAAATACTTtcaatgttgttgttttttctttgttacTGTCATATT
TCCCATCTCCCAAACAGAGGCTCAAGTGTTGCGTGAATGCCTCCTATGCA
TTGAAAATTAATGGACTCATATTAATTATAACACCTGATTCCTCACATCA
AAACAGGCACCAAGGTATGATGAAGTCCTGGAAAAATGCATTAGAGGAAA
TCGGTTTTGTGCGCTTCAAATACGAAAAACTTGAACATTTACATTGTATG
GCATACAGGAAAGTGAAAGAGTCGGCTATTACTGAATCTTTGATGGATGC
TTTATCAGGATCGTTCTACATACCACAAGATTTTCAAGAAGTTGATAATG
AGAGTCAGTTGCAGAATTAAAGCTAAAGACAATGGTTTTTTCTAGTCTAG
ACTTTATATGAATATTATatgtcaattttaattttgtatgaaattattat
taaacaAATTATTGtgatgattttttaaattttattaaataaaaagCACC
TTATGAATCAAAGACCTTACTTAATCTTGTCTAAGGTTTTTACTCTGTTT
ATGATGTGTGGCGTTTGATTTTATAATATTGTCTTTTTTCTCtactttta
gaaaataaaatctcAATAATGGGGAAGGGAAGAAATGCAAAAAGTCTTCC
AAAATCAAGAAGTCATGACAAGAAAAATGACAAGAGCTCAAGCATCGATA
TTTCATCCCTTGGAATTGATAAATACAAGATATTTGTCCTTATTTTAGGT
AAACTTGTCTATCAAAAACTTTATCGGGGGAAATAACCAAGTGACAACAG
TCCTTAGAATTCAAGTTGAAAACCTGAAATGCATTCGGACTATAGAGCTA
gcctaaaatgttaaaaagaagCTGCAGTTTCTGCCGACCATGACCAATTT
TTAAGATGCGAGAACTGCAcaaataaatttgaataaaactcTTTATTTGA
ACTCAGAATTCTCTTTTCAAAGGATTAAAATATGGTGTTCTTTGAGAACC
GTAGAAATATTGTTACATTCattctattttcaagatttcagaAGAAGCGT
CGTCATGCTTTTCAAAATTCGACCTTCACTACAAGAGGTCATCATCAGAG
TGTAAAAACctatcaacaacaaaaaagattttaaaaacaaattcataATT
AGATaataaatttacaataaaaaaaaacaatgttaaaaacaatagaaaag
atATAGCTTGGTCGAGCATTATATCATTGACCATTTTGTCATTCCATTTC
AGCTGCAATCATTGGCTATCTACATAGTCAACATGTTTATGGGATGTTTG
AACAACAAAGATTCTTCTCACATCTCTCAACACTTGAAAGAGAACTCTCT
TTCAGAACTGAAATGGTAGGACTCTCCGGACAGTGTTTCAACTTTTGTGT
CCCTGCAAGCAATAAGATCAGCCGATCCTTAAAAAGGCAAATTTTTGGCT
GATATGGACCAGTCCTGGCCGATTTTGGCCGATCCATGCTGAACCATGTT
CTTAAATCTTTTCTCTAAACAAAGGCCGATCTAGACCACTCCGAATCGAC
ACATTTGTTCATTTTCATGGTAATATTTCTCAATTTTGGTACTGTGAACT
AGAacgtttttctgaaaatcagatTGATATTTCCACTGAGGTTACCTTAA
AATCAAGATttatgtatatatttttgatgATCATGAAAAGGTAATGTAAA
CAATTCTACTCTTAATTAGTACTCTAATTTTAATAAGATACTAAGATTTT
TCTTATTAAAATTCTTAATGAAGACTACCTTTTTCCCACCCCAAACAATT
TGATCAGAACTAACTAACATGTAAAAATCTGTTTAATAAACCAACGTAGT
AAGGTCATTGAAGAAACACTGAGCACTTCTTcataagtttttttcttttt
cagggaCTTTATTATTCTTACTACAAAACAATGGCTGAAGCACCCTCTCT
ATATGATGGATTACATGATCTTGTTAGATGTAATATCACGGAATACCCAG
ATAAAGTTAATGTTTTGCGTAGATTCAATCTTTATCCTGAGGTAAATTAT
CTGCCTTTGATACGATCATTNCTGCGTAGATTCAACCTTTATCCTGAGGT
AAATTATCTGCCTTTGATACGATCATTATTACCAGGCCATAAAACATTGA
TTAGGTCCATGTTTAATGTTTTTCATTGATTGTCAGCAAGTTTTATTGAC
TGTTAAATACAAATTATTGTCGAAAAATATTTAACATAACATTGAGTTTC
AATAATTcccttttttaaagtcaatgtTTTGTATTGACTGTCAATTATTT
TGTTGTCAGCGCTGTCAATATAAGTAATGAACAgtcaatgcaaaaaattg
actgtTAACACACAATTTACAGTGTTATTGTTGACGTATCACTACTAgat
caaaaaacattgattaggccCCTGCTCAATGATTTTCATTGACTGTCAGC
AAGTTTTTCATTGAGTGTCAGCAAGTTTTTTTGACCTGTTGAAtacaaat
tattgacaaaaaatattttgcattgactgtcaatcaattttcttgaaaac
taaaagaatatattgaccGTACATGTTCTCTGACAATTTCGTTATTTTTT
GCCACAATTATACGTTTCCTTGAGGGTCTCAGCGTTCAGAAAAAAAGAAC
TTAACTTTTgtcccactgaaaaaaaaaagcccaaagcaCTAACACACTAA
GAATTTCTTGGAAATCGATTATTGGATTATTTGATACATTGAAATTCAAA
TCATGGTAAAAGGTGATCAACTTTTCTTAAGTTTTTGATTATTGTGTTTA
TTTTTTGTGTCAAATAATAAGGTTACATGAGCATGGTTAGGTTCTGTGCT
CTACATTTTTAAACTAATTTGATGAAATTATTCGTTTTTAGGTTTTCCTT
GGTATGGCATACAGAGCTTACAACTATGTGAGCAGTGTTATGAATTGgga
aacaaagaaatgttataGTATCAATCGAGGACAAGGGCTATCACCTGTTG
AAAGCTGTGTTGGTAAGTACTccatttagaaaataaaataatctcTGCAA
AAAAATTCCAATATGGTAAACATTATCCATTGCTATCCAGACAGCTGTTC
CGTTATAAAAAAAGTAACATTATCGACCTAATATACTTCCTTTACTTTAT
CGAAAACAAAAGTATGGTGTGTTGATATGTTTTCCTCGTTTTCTCCACCA
TATGCTGTAATTaaggtaccttaagggaagaaatttttgcagaatttaat
ttcgcagttaagaagaatttttgtttaaaatatggcTTATTTTGCCCCAA
AAACACCAATTCTAGACTgaggtgattttttaaatcatgagaATAATTCT
TGTTTCGGGGAATTAAATTTCacggatttgtcaaaaaaacgcaaaattaa
attccacaaATATTTGATCCGCAAAAATTTGTTCCGCAAaaattcttccc
ttaaggtataagaGCTCCAACCCATCATCGTTGTctttgttcttttcatt
ttcttcaggTTTGGGTGATATCGCTCATTTTTATGTTTTCCCAATCTTTG
GACTTGCTGGATTTCAAATGGCTGTTATTTTCATTCTTGGATGTTATGTA
GGGTGAGAAATGTTTTTTACAACTTTCTGTCATAATCAATGAATTGGGGG
CTttctctaaaaaaatttttctttaagttCATGTGTCAACTAAaggcttt
gaaaaagaaattgatttgTTACCAATGTTTTCTTGTCATCTAAGAACATC
CCTTGTGATTGAAGTGGTCAAGGTACATTTTCCATTTCGAGTATTAGGAA
TTACATTTTCAAATTAGCAGGTTTGTTACAGGGCTCTGATAATACTCAAT
ATTGAAAAAGGACGGGTAAAAAATTGACGTACTGTACTTAAAAAAAGCAG
GAAAAATTGCATTATTTAATTCAAAAACGAGAAAGTGTGAAGAAAATGAG
AAATGATAaaccaaatctttttttatttcagtggTAACATTTTGGGTGGT
GTTTTATCTGTATCTTCATTCTTCTTCAATCATGGTGAGGTAAGCAAAAC
GTGaagaattccaaaaaaaactctCTGTTAAAATTCATAATGTGAAGAAA
CCTATCTTAAAAGGGGGAGGTAGTCTTTATAGCAGGGAACAGGGATTTAT
AATGGGGTGTTTCAGTCAAAGTAGGACCACATGAGAAATGGTGGGGTATA
AAATTTTTGCCTTCAAAAGTAATGTATCATATTCTATATTATTGGTCGAA
TAGTTTGGTGTTTTCTTTTGAGGAATTCGAAATATAATGGGAAGATGTTT
TCCATCAGCGCTATTTTACAACCTTTTACTTTAAAAATTATTCTGTTGCC
CGCTTATAACCAGTCACTGTAAAGGAAAATGATTATATAATACTAtatta
taacaatagcgttcagtttgaggcaGAATTGATGACAACAAAattcgaat
ctttaatggcttacttaatgaccgctatatggataataatactATATAAT
CTTGGTTAACGAAAATACTTATAAAATTTTAGGGTCGTTTTTAAATCCAT
CgactaatttgaaaaattgattgatCTGACTAAAACCACAAGTATAAAGC
TTTTACAATTAcatagtgccccccccccccccttttNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTTGa
ctgggggaacttcactgatctcaaggtgatcttgttgcaaaacctgttta
agcaataaaatcagcaaatcttttgggataaaccaacttttcattacaat
ttcatttttccagcactttcaaggctattttttcaagctttccagaattt
caaacttgatttaaggcatttttatgttaaccatatggggaaccgcaaaa
tcttaaaatagctgggggaattcaaaaaagaggggggaaccgaaaaattt
tgaaatatggtgggggaaataaaagaggggggaatggagaaaaattttga
tttttagtggggggaaccaacccaggaggacactatgaattATTCCCACT
GGAACTCAACTGAATAGGTTAGATATCAGTGATCGAATAAATCCTTAAAA
GTGTAATATTATTCTTGTATTTAGATAAcccggggggcactcatatgggc
CAACCCAACCCTTTCAAcgtaaattgaaaatttagtatattgtaactttt
gaaatttggtacagtggtTCAATGGTTTTACAAGTTTTGAGTTTGAGAAG
AATCACTTTTGAAACAGTCCAGTAGATAGTACAAAGCCACTTCATGCCAA
TCTGCCGTATTATCTTTCGATTATGATATGGGAATTTTATAGTTAAGAAC
CGATGGCCAGGTGGTcaattgtctgtacacagacccagtatctacagcta
ctttcaaaattcattgccgtagagggtcggtctgttgtcattgccttttc
tcatttgagatttttcaaaccgaccgctgcgatggagtgttggtgtgAGA
AAGGAGATGACGAGAGAAGTTTTGCTAttataaatcatactttttCGCAG
ATGTCTCCGTACgggagtttttttttaacaaacagacaatgcacaaagag
tgtactacgaagcgataaacttgagatacactctggtatagAGTTGGTGT
TCAAACACGTCAGCGTCTCATAGCAGTGGTTCGTGGTTCGGATCACCGCT
CCTTCCaatatgttccgttcagttTTTAGATGGCCGAgtcggctggccgt
ggacctgGTGAAAACACTTGGCAGACTGTTTAAAGATTCCTGGATTACCG
GGCTTTACACATAAAAAATCGACTTTATGcacaattttaatgactttgaa
GTTCACCTTTTTTCTTGTCTACAGGCAACAAGAGTTATGTGGACGCCACC
TCTTCGTGAAAGCTTTTCATTTCCTTTCCTGATGGTTCAAATGTTAACAG
TTGTACACATCTTAAAGTAAGTTGCTTCTTTTCATTCTTAAATACAACAG
TTGACTCTCTcaaattcgatcttcaagggacaaaTATTTTCTTCGAATCA
AAATATACAAATGCAGCCTTTCTAATTCAGATTTACTTGCTTCGGAAAAA
AATAGAATGACTGAAATATGTAGACATTAAAACACTGTGATCGCGACGAG
ACAAAAAAACTACTCAtaattattcaatctttttattTATTACAGAGTAC
ACAAACCAAGCGTATTCCATAGCATTTTATTGGCAATTACTACAGTCTTA
TTCATGTTGCCGTGGCAGGTATGTCTCTTCTTCAGTATTTCTATCCCTCG
TAAATGTCATGACATTGTCATTAGCTGTCAACTTTCACTAAAACGCAGGA
GGGGGGATATTTCAGCGAAATTCGACTTGATCTGAAGTTTTTTGGGGAAA
TCGAAGATTTTTTTGTGCGGGAGATGTTGGAGAAAATCTTGGAAATGCGG
TTTggcgattttttttttcacgtaAGGGAATCGTTGGCATTGTCCCAGCG
CAAGCGCAatgattctttctttttttaaaccttAGAGACCTCAGGTATAT
ATTGGTCGGATATTATCCATAATAGGATGATGTACTTTGATTATTGAGAT
TACTTCTGAGCTTTGCTTGCTGATGATCTGATGGCGCTCCAGTAAACTTC
CCAGCGCTATCTAGTGACCCCCTGTCTTCGGATCATATGAGTCGATTGTC
ATTGAATCCTAATTGCATcagattttttcaattcatattCTCCAATTTCT
CTTATGTTTTAGTTCGCTCAGTTTGCCCTCCTGACTCAAGTAAGTATAAT
AGATATCAAGAACAcaaagttttttgatgattacttgatatttttcctGT
ATTACTGCTCAATTATATAAAGTCAAcgagcccccccccctcaatCCACC
CTTCAAATCACGCATTCACACAATCACGCAAAAGAATCACGTTATCGCGA
CTTAGATTTCCTTTCTATCCTGATCACGGTTGATCACGTTGGTTCctccg
atcacgcaatcacgcatttaaaaaaatcacgaaatcacgaaatcacgaac
TCGAAAAAATGCatatcacgccatcacgaaaaccacTAGGGGGAAGCCTC
GtcaactctctctctctaattttAATCATtgtataattcgaactaaacaT
TCGTGCCCTTAGCTGGAAAGTAGTGTAAAACACTTTTATTATTCGAACTA
AAGAGAGGCAACTGTTGTAggggaaattcaaactcacaGCCCAAACCATA
CTATTCAATTTGCCAACAGTTTGTAGAAATCATAGCATGAACTTCCAGGC
TAGGATTGAGGTTTTCTCTACGATTTCATAAGTTTCTAAGTGTTCATGTA
TCCATGTGTGTTTCAATTCGATCTCTTTCTATTTCAGGTTTGTTCGTTAT
TTGCATTGTACATTCTCAAGTTCATTGATTCTAAAAGAATGCTTGTATTC
CTCAACGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006699XLOC_006699Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011915-exon-sc0000134-1491911889:50958..51045TCONS_00011915-exon-sc0000134-1491911889:50958..51045Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:50958..51045TCONS_00011915-exon-sc0000134-1510915933:50958..51045Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:50958..51045TCONS_00011915-exon-sc0000134-1575043694:50958..51045Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:61109..61255TCONS_00011915-exon-sc0000134-1491911889:61109..61255Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:61109..61255TCONS_00011915-exon-sc0000134-1510915933:61109..61255Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:61109..61255TCONS_00011915-exon-sc0000134-1575043694:61109..61255Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:61760..61872TCONS_00011915-exon-sc0000134-1491911889:61760..61872Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:61760..61872TCONS_00011915-exon-sc0000134-1510915933:61760..61872Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:61760..61872TCONS_00011915-exon-sc0000134-1575043694:61760..61872Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:62411..62548TCONS_00011915-exon-sc0000134-1491911889:62411..62548Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:62411..62548TCONS_00011915-exon-sc0000134-1510915933:62411..62548Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:62411..62548TCONS_00011915-exon-sc0000134-1575043694:62411..62548Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:63399..63519TCONS_00011915-exon-sc0000134-1491911889:63399..63519Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:63399..63519TCONS_00011915-exon-sc0000134-1510915933:63399..63519Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:63399..63519TCONS_00011915-exon-sc0000134-1575043694:63399..63519Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:64016..64109TCONS_00011915-exon-sc0000134-1491911889:64016..64109Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:64016..64109TCONS_00011915-exon-sc0000134-1510915933:64016..64109Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:64016..64109TCONS_00011915-exon-sc0000134-1575043694:64016..64109Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:64489..64546TCONS_00011915-exon-sc0000134-1491911889:64489..64546Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:64489..64546TCONS_00011915-exon-sc0000134-1510915933:64489..64546Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:64489..64546TCONS_00011915-exon-sc0000134-1575043694:64489..64546Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:66832..66923TCONS_00011915-exon-sc0000134-1491911889:66832..66923Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:66832..66923TCONS_00011915-exon-sc0000134-1510915933:66832..66923Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:66832..66923TCONS_00011915-exon-sc0000134-1575043694:66832..66923Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:67153..67225TCONS_00011915-exon-sc0000134-1491911889:67153..67225Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:67153..67225TCONS_00011915-exon-sc0000134-1510915933:67153..67225Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:67153..67225TCONS_00011915-exon-sc0000134-1575043694:67153..67225Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:67720..67746TCONS_00011915-exon-sc0000134-1491911889:67720..67746Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:67720..67746TCONS_00011915-exon-sc0000134-1510915933:67720..67746Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:67720..67746TCONS_00011915-exon-sc0000134-1575043694:67720..67746Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1491911889:68345..68415TCONS_00011915-exon-sc0000134-1491911889:68345..68415Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1510915933:68345..68415TCONS_00011915-exon-sc0000134-1510915933:68345..68415Clytia hemisphaericaexon
TCONS_00011915-exon-sc0000134-1575043694:68345..68415TCONS_00011915-exon-sc0000134-1575043694:68345..68415Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000134supercontigsc0000134:50958..68415 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.04025	1.30113	1.43384	0.806771	3.40761	5.32464	7.37807	12.0516	15.843	17.0169	9.42699	17.8096	9.50505	10.6423	13.8308	10.1081	8.56449	6.5807	4.53691	4.85714	4.24124	2.4503	2.06935	1.9064	15.7916	9.31845	3.40873	0.849806	1.57811	1.44863
Blast
[Close]
BLAST of TCONS_00011915 vs. Swiss-Prot (Human)
Match: D19L1 (Probable C-mannosyltransferase DPY19L1 OS=Homo sapiens GN=DPY19L1 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 3.872e-95
Identity = 144/247 (58.30%), Postives = 182/247 (73.68%), Query Frame = 1 
Query:  253 LHSQHVYGMFEQQRFFSHLSTLERELSFRTEMGLYYSYYKTMAEAPSLYDGLHDLVRCNITEYPDKVNVLRRFNLYPEVFLGMAYRAYNYVSSVMNWETKKCYSINRGQGLSPVESCVGLGDIAHFYVFPIFGLAGFQMAVIFILGCYVGGNILGGVLSVSSFFFNHGEATRVMWTPPLRESFSFPFLMVQMLTVVHILKVHKPSVFHSILLAITTVLFMLPWQFAQFALLTQVCSLFALYILKFID 993
            LH  H+  +FE  R FSHLSTLERE++FRTEMGLYYSY+KT+ EAPS  +G+  ++   +TEYP  +N L+RFNLYPEV L   YR Y  +  ++  +TK C+++ RG+GLSP+ESC GLGD A FYV  IF L G  MA+ FI G Y+ G+ LGG+++V  FFFNHGE TRVMWTPPLRESFS+PFL++QML V HIL+  K      I L I+ V FMLPWQFAQF LLTQ+ SLFA+Y++ +ID
Sbjct:   33 LHWSHITHLFENDRHFSHLSTLEREMAFRTEMGLYYSYFKTIVEAPSFLNGVWMIMNDKLTEYPLVINTLKRFNLYPEVILASWYRIYTKIMDLIGIQTKICWTVTRGEGLSPIESCEGLGDPACFYVAVIFILNGLMMALFFIYGTYLSGSRLGGLVTVLCFFFNHGECTRVMWTPPLRESFSYPFLVLQMLLVTHILRATKLYRGSLIALCISNVFFMLPWQFAQFVLLTQIASLFAVYVVGYID 279
The following BLAST results are available for this feature:
BLAST of TCONS_00011915 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
D19L13.872e-9558.30Probable C-mannosyltransferase DPY19L1 OS=Homo sap... [more]
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