TCONS_00011860 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011860
Unique NameTCONS_00011860
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3281

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011860 ID=TCONS_00011860|Name=TCONS_00011860|organism=Clytia hemisphaerica|type=transcript|length=3281bp
gagaCATTTAATACATCAAattcaaagaacataaaaaaGTGCAATTTTGA
CTGAAGACTTTGGATGGAAATATAAATATGGttgtttgtcaatatttttt
gagAGGCACCTGCAAATTTGGAAACAAATGTCGCAATGAACACTCAAACA
ACAATTCAGGGGGTGGAGGTTTTGGTAACAGCCTTTTCAGCGGTGGTggc
ggtggtggtggtggtggtggtgggcGTAGCCGGTTTGGCGCCACAAGCAG
TAATGATCAATATCACTATAACGCAAACAATTCTAACAAGGGTACTTCAC
TTTTTGGTGGCAGCAACAAGAATACGCAATCAGGTGGAGGGTTGTTCAGT
AGCAATAAAAGCACCTCTGGAGGAGGTCTATTCGGCAGCAATAGCAACAG
TGGGGGAGGGTTGTTCAGCAGTGGAGCTACAAAGAACAATCAACAAGCAA
CTGGAGTAAATGCTGTTCTGCAACTTGTCAGGAAAGAGTTAAAAGAATGG
GATACAAATAAAGTATGGCCATTATCTTGTTTTGCTGCTCAAAAAGAACA
AAAGTGTCTACCAGGTTTGACGGACACTTCACCAGAAGAATTGCGAATGG
TAGCTTACAAATGCAAAGATACTGGAAACATGCAACCCTATTTGTCGGGT
GTTCAGAGCTTGAGTCAAGCAACGATCAATCGAAGAAATGTATTAATAAA
TATGAACGATCAACAACTGCTTCAAGAAATCAACAATGCGAGTAATTTGG
CATcgacaaacaaaacaaacacaTCGAATAACCCTTTCACCTCAAGTTCA
CAAGCTGCCACGGGCGGGGGCGGCTTATTCGGAAACGCCGCAAATAACAA
ACCCAGTGGTGGTGGTTTGTTCAGTTCAAATACAAACAAACCCTNGCCTC
AAGTTCACAAGCCGCCTCGGGCGGGGGCGGCTTATTCGGAAACACCGCAA
ATAACAAACCCAGTGGTGGTGGTTTGTTCAGTTCAAATACAAACAAACCC
TCGTTATTCGGAAGCTCATCTAACAATCAAAATTCAGGGACTTCATTATT
CGGCGGTAGTGGCAACCAATCAAATAGTGCGTTCGTTAGCAAACCCTCAG
GTGGTGGTTTATTCGGAAGCAGCAACACTCAAAGCGGTGGTTTACCGAAC
CCATTCGCTTCAAACGCACAACAACAAAAGAATACCGGTGGCGGACTTTT
TAGTAGCAGCACCGGAAGTGGTGGAggattattttcaaataataccGGTA
CTAACGCCGGAAAAGGACTTTTTAGTAATAATACCGCTTCTAATACGGGT
GGTGGATTATTCGGAACTTCGACGAATCAACAACAATTGTCCGGAGGAGG
GCTATTTTCGTCTAATACGAACAATGGCGGAGGGCTTTTTGGTAGTTCAT
CTACAAATAATCAGCCCAGCGGTGGAGGAATTTTCGGGAACTCAGCACCG
AATAATCAGACCAGTGGTGGAGGGCTGTTCTCAAATAGCACGTCTGGTGG
AGGTTTGTTCTCACAGAATAAGCAGCCTAGCCAAGGAGGAGGACTTTTTG
GTGGAAATACTCAGGTGAGACtttgttttttccaattttaattGGGTCTT
TCTGTGTAATTTACTTAATCTCCGCCATAATGGAAGTAAACATTGGAATT
TTTAGAGGCGTTCCCCTATGctaatcgaacgtttgcttccataatggcgg
aagttacgtaacttaacaaaacatgaaaaacttcTCTAACGACCCTTATT
ATAGAACTAGGGATTTCGCACTGCaaaattagaataggcagggcgaaaaa
gtgggctgtctaaactaGTGCTAAGTCCCCTatttgacgtcatcaaaact
gaAGCCGTTCCATTGTACTTGTTACCTGTCATTTTtcgtttcatttttca
aatttcaaaaacgtTCAAATTGTGTGACGTTCAAGATGAATACAAATATC
AAAAGAAGGCGTGAAAGGTTTGACTCTcaaCCGGCTCAGGCGGCACAGAA
CACTAGGACTAGTGCCACACCCTCGAACCCATTCCTTAGTTTATCGCAGA
AAAGTAAAATTCAAGAACAGAAACAAATGacagaacaaattaaaaaacaa
tCTACGGAACCTGCCAAAACGTCCGGAATTATCATCTTTCCGCAGTGCAC
ACCGGCAGATTTGGTGAAATTTAAAAGCGATAAATTTGTTTTAGGGGAAA
TTCCCACTTGCCCACCTCCAATAGAGCTTTGTAGATGAAGAGTTTTGTTG
GTTGTGGATAGTGGTGGAAAATCTTAATTCTTTAATGGACAANAAGTTTT
GTTGGTTGTAGAAAGTGGTGGAGAATCATTCTTACTGGACAATATTCTTG
GCAATTTGTTGATAACACGAAtaactttcaaaaattcatattgATAACGG
CTTGAGGACGAATTGAATACATAACGACTGATGCGTCATTTAACAACCTT
CTTATAACCCTTTTGTATGAGGATTTAGTGGATTGCATTTAGAAAGTAat
acctaaaattttaagtttctACTTTTTAGATATAAAAACTCCAATTGTAT
AAAGATTTGCACTAAAGGCATCGAAAACAGTCTAGTGCACAGACAGTAGA
GTGTTTATTCTAgtgaggcgaaaataaaaaaaatgtagtgtttccggaat
gcgggtgaaggaaaaaggctctcatgcggccggtcggaaaaattttgttt
tgctatttttgataacttaagatcattgaaatagaactttaaagataact
tttatgtacaaacagtataaATACCTAACCAAACGGCGTTTGATAGATTG
AAcagtcaacttgattttctttatgataaaccatatagatgaacccatag
tctgcggccgggtcagaaaattttgttttttcacccggctggtttccgga
aacactacattttttattttcgccagATGTACTGTTTTTGACCCACATCT
CGTTATTTCTCAATGAGTATTACCTGTTACTGATGTGAAAGTATTAAGAT
TCACCGGTTTTCCCTGACCAAATATTTTGACCAACTATTCCTCATTTTTG
TATCCCTATCAAAACTTTCCCGATGAAATAACTCGGCTTTTTCTCACGAC
GTGAGGTTTAAACCATTCGGAATGATCCAATCGAGCTAACAGAATAGTGA
TTCGTGGGTTCTTTCTGCCTGACTTTTTTAATGCTTGTATGCCTATTTTA
GCTTTGTACCTATTTAATAATTAATACGATTATTTCAACTGAATAGAGAT
TGAAAGATGCCGTCTATTCTTTAATCAAACC
Run BLAST on NCBI

transcript from alignment at sc0000133:260879..273550-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011860 ID=TCONS_00011860|Name=TCONS_00011860|organism=Clytia hemisphaerica|type=transcript|length=12672bp|location=Sequence derived from alignment at sc0000133:260879..273550- (Clytia hemisphaerica)
GAGACATTTAATACATCAAATTCAAAGAACATAAAAAAGTGCAATTTTGA
CTGAAGACTTTGGATGGAAATATAAATATGGTTGTTTGTCAATATTTTTT
GAGAGGCACCTGCAAATTTGGAAACAAATGTCGCAATGAACACTCAAACA
ACAATTCAGGGGGTATGAATGACATTTGTTTTTTGTAATAATGGTTTTGA
GTATGCTAGTTTTGCTATTAAGCCTTTTTTGTTTTCTAATAATATTGAAA
CGTTCTCCTTTTTACATATAATAATAGTTAACCTAGTTAAGAGTTACACT
TCATTCCTCTTTGTCTTATTAACATCGAATTATGTACATGACATGAATTT
TTCACTAATCAAACCAACCAACTCATTTATTAACCATTTTTCAGGTGGAG
GTTTTGGTAACAGCCTTTTCAGCGGTGGTGGCGGTGGTGGTGGTGGTGGT
GGTGGGCGTAGCCGGTTTGGCGCCACAAGCAGTAATGATCAATATCACTA
TAACGCAAACAATTCTAACAAGGTATTCGTTGGGAGTTTGAAAAATTGAG
TTGATTGTTAAAGAAATTAGGTTTGGATATTTTGCCATGAAGAAACTGCT
TTTTATTCAATTTCTACCACTTTTTCTGCTGAGGGGGTTTGTAAGCTAAC
TTATTTTCAAAAGGTGCATAGGAAAGAAAAAGAAATCTAAGGGGGATTCA
AATATTTTTCTTAATAGAACTTAGCCTTGCCATAAGCATAAGCTTTTCGG
TTAAAATTATCTTTATACTCATCTACACGCTTTTTTTATAAGAATAGTAT
ACTTGGGATGAGGCTCAAGTAAGAAATCGAGGGTGAAATTCTTAACGTAT
TCTTACCTTTTCAGACTTCACTTTTATACAAACACAAGAAATGATCAATT
CTATAGGTTGAGACTTTTGAGTGCACATTGGGAGGTTAAATTTTGTTTCT
GACTCAAAGTTTCAAATTAAGTACAGTTTTTTCTTTTAATCAAATACAAA
ATGACTGTATTCTTATCAAAATCTGTGAAACTCACCCTAGAGGGTATTCT
TAGGGTATTATATATTACGATTTGGCCGATTTTCACCTTGATTGCTGATA
TTCTTATAGAAGATATTCCTATAAAAAAAGCGTGTATAGCTTTACACCTT
CACGTGTAAATTGTTCAAGATTTTGAAACTTTACTACCTTACATTCATCA
ACCTTACTACCCTACATTCATTAACCTGATAGGGTACTTCACTTTTTGGT
GGCAGCAACAAGAATACGCAATCAGGTGGAGGGTTGTTCAGTAGCAATAA
AAGCACCTCTGGAGGAGGTCTATTCGGCAGCAATAGCAACAGTGGGGGAG
GGTTGTTCAGCAGTGGAGCTACAAAGAACAATCAACAAGCAACTGGAGTA
AATGCTGTTCTGTAAGTAGAGGGTTTTCAGTTTTCACTTATGTAAAGTAA
GATGGAATCGTTGATAATCCGTGTAATANGTCAGCTTCGCTTATGTAAAG
TAAGATGGAATCGTTGATAATTCGTGTAATACAGTAATATGGGTGTTATA
TGATAATAGGATAATTATCACGGGATAATATCAGTTTGTACAAACCATAA
TTTTGTCTTTTCCACTATTTTCTTTTAGATCTGAATCGAGTCGTCAGCAT
ACTAGATATTGTATAGTCTAGTGTTTTGAGTGTTCACTTAACTTACTCTT
GGGTACCTAATAAACCCCCCGCTATTCGATTTTTCGAAAAATTTCCATAA
CCCCCCCCCCCNCAACCCCCACCCCGCTTATTAATTTTTGGGAAAATGTT
TTTGAAAGTTTTTGCCCTAATCCAGATGTATTAGCCTTCTTTAAAAAGAT
TTTCCACCCAGGACGTATTTATTCCAACCCCCCACCCCGCTTATTAAGTT
AAATTTTCCACCCACCCCGCTTAATCCAAACCCCCGTTTATTAGGTACCC
GAGAGTATGTTTTGCTTCTTGTTTTCAATTTTGATGTGAATGGACTTGGA
TTTCGAATGGGTTCATTCAATTTATACCTGACTATTCATCATCCATCGAA
TAAAAAACTATCAGTAAAACATAGCATAGCATACCATGACAGGTTGTTGT
GTGAAGCCTCCTTCTCTGTCCAATTGAGTACAATCAATGAATAAATCTTG
TACACGACAAATTTTTACGTCTCATATAAAGACCTTTCAACGTAGTCTTA
TTAGTATAGACTCTTTTTCATGTTGTTTCGTTGGCAACTTGTCAAGAAGA
AAAGTTTTTACGACTCTAATAAGACCTTTCAAAACATAGACTAGGCTTTT
AATATAACCTCATTATTTTCATGTTGTTTCGTAGGCAACTTGTCAAGAAG
AAAAGTTTTTACGACTCTAATAAGACCTTTCAAAACATAGACTAGACTTT
TCATATAACCTCATTATTTTCATGTTGTTGTAGGCAACTTGTCAGGAAAG
AGTTAAAAGAATGGGATACAAATAAAGTATGGCCATTATCTTGTTTTGCT
GCTCAAAAAGAACAAAAGTGTCTACCAGGTAAAAATCTTTCTTGAAATTT
TTTATCTTCTCCTCGTAAAGAGTGCTCGATAGTTCAATTCGTGATATGCN
GTTTTTATCTTCTCCTCGTAGAGTGCTCGATAGTGAAGATCTCTTGTCAT
TATGGCAAATTAGATTTCTATTTCATTAAAAGCGGATTAAATTTCACCTA
GATTAAGATTTGCGATTCTCGCGAATTATGGCCCTTTTCGCGAAAATTAG
TCCTCTTGTAATTTTTTCAGATTTTTTAGGATATTGAAAGAAGTTTTAAG
TAAAAAAGAGACCGATTCGCGAAATTTCTGTTCACGCTGAAATTTTAGAT
TTCGAATTTGCGAATTGAAGTCCACGTGAAAATTAATCTACTCATAACGT
ATAACTTTGGCGAGTTTATGTATTCGAGATGAATCGAGGAGGGGGGCGGT
ATAAAGCAAAGTTGACATGTCTCCAAAATCACCGTCCACTTTGCTCGACG
ACGGTAAAAACACCAAAATACCGTCGTCGTTTAGGTGAGCAAAGGCGATA
TATAGAGCCGTACATCAACTATCGACTTTGTTTTGTATCGATTTCACTTA
CCGTCACTTACCATAAACTCGGTTTTCTTTTAGGTTTGACGGACACTTCA
CCAGAAGAATTGCGAATGGTAGCTTACAAATGCAAAGATACTGGAAACAT
GCAACCCTATGTAAGTATACTAAAGTTGCTTTTTAGCAATTTCATTTTTA
AAAAGTTGCCAGATTTTTTATAAAATAAATTTTCACAATTTTTTGACTTT
TATACTTAATATTTCTTAATATACTTAAAATCTATTTAATCATCTCGGAG
ATTGAATATCTGTTGATTTGACAGAAAATTATAACATTTTTTCAATCATT
TTCTAAGCGTTTAGATAATGAGTTTTGAGGATTTTACTTTATATAAAGAT
TTGTCAACTTTTTTTGGGACACACTGTGTAAAATGCACATATATTTAGCG
ACCGTAGCATAAAGGTCCAGATACGGTGCGCAAGGTTGTGGGTTCGATCC
CCAGCCGGGTCATACCAAAGATTCCCAAAATGTAACTTGATGCCTCTCTG
CTTGATGCTCGGCAAGTTAAGAGACGGATCAAGGGTAAGTGGAAAAATCC
AGTGAAAGGAGTGGCGGCTTCCCCTACCCTCGGGTAAACAGCTATACGAA
AAGGAGCCTTCGGGTCGCCCTCGACTGCGGTCGCAAACTTACTTTTTACT
TATAATGCACGATTTTATTCACACTCGACCGACCAAAGTTAAAATTACTT
GCGCCATGATACTGCTACGTAAGAGTAGAAAATGCATTTTGACTAGATGT
TAAAAAACCTATTCTCATACTGTCGGGTTCCTAATAGCCGGGGGGGTTTG
GAATAAGCGGGGGGTTTGGAAAAAATCTCAAAACTTAATAAGTGGGTGGG
GGTGGAAAATGTCCTGGGTGGAAAATTTTCGAAAAAGAGGCTAAAAATAA
TTTCCCAAAAATCAATAAGCGGGGGGGAGGGTTGGAATAAGAATGTCCTG
GGTGGAGAATTTTTGAAAAATTAATTAGCGGGACCCCCCGGCTATTAGGT
ACCCGAGAGTAGATCTTGATCTCATATTTTCTCTTCTTTTCCACTAGTTG
TCGGGTGTTCAGAGCTTGAGTCAAGCAACGATCAATCGAAGAAATGTATT
AATAAATATGAACGATCAACAACTGGTAAGACAAAACTTTTAGAACAAAA
CCACATACATTTGACGCTCTCTAATTCGATTTTCAAGGGGAATCGAATTT
TCATCGAATAAGGGAGTGTATCGAATAGCAGAGCGTCATTTATGTGAGTT
TCCCATTGACGGTGACTTTCAATATTATCGAATAATAGAACGTCGAATAA
GAGAGCGTCTACTGTAGTACCAACTAGCTAGGAAAATTTGTCTTAGATAC
CACCACCCCCTTTTTAATACCTGGTACTAACCTTTTTGGAGGAAAAAAGG
TTAGACATCTATGGGGCCAAGTACCCTGTAGCTGTACCACCTGCTTAGAA
TTGATTAGAAGGCTATTTTAGGGTATTGGATTGCTTATTCTAAGTCCAAA
TTTTTTCAGATCAATTAATCGTCTGAACGCATAACAAATGTAACGGATCT
TTGTTTTCTTAAAAAAATGATAAAAATATAACACAAAAACACTGACAAAG
AAAACTAATTCAAGAAACAAAATAAAACACTAAAACATTATTCTCGTTTT
AAGACAGCCCACACATCAACACAATGTTCACCGCTATTGTTCCCTTCCTC
GCCTTGATTAACCAGATCCTCTCCATGCCAGATGCGAATCTTCTCCCCCT
TGGTGATTTGAATCTCACCGTCAAAATTATACAAGGTTAAAGTGCGTGAC
CGGAAATCTGTTCTAGCTAACCCGTAGTAGCCGTCTGTGCCGAGTGCGAA
AAACGGGAATAGAAGGGTGTTGTTTTGGCGTGTGACCACTGTCGCCATTT
GTACACTTCGGAATCCGAGGCCACACCCCCAAAAGCTTTCGGCCGCTGAG
TTTGATGCGTCGCAGGATACGAATCCACTTTTGTGTTGTAGTGTCAGTTG
GCGTAAGGTGCCACTTCGCGGGATAGTGAAATGTCCAAATCCGCTGTCTT
TGGCTTTGTAGCAGACGTTTTCAGCAATACGGTGTAGACATTCAACATCT
TTTTGAAACACGCAATTGTCACTGGCAGGATTGTAGAAAAGATCTGCTGA
ACAGCTTTGAAAGGTTGCAATGTCACCAGTGCAGCTAGCAAATTTTGAGC
AGTCATTTGGGAAGGGGTAGTTTCCGTCACGTGATATCTGCTTGCAGAAC
GTGTCAGCGTTGAATGGTGCTAAAGAACAATGTTTGTATTTGATTGCGAT
AAGACAAGAAAGTTTGAATAATCAGTGAGAATGAACTGCATTTCTGACCA
ACTGGCAGTTTACTAGACTACGTCATATCTTTCCTGCGTTTCGAGCTTCA
AACTCTTACTAAGGCCTAAAAAGTATGGAGCTGTATATAGTTTAGTAGAC
TAGTAGTTTACGGTCTGCTTCTCTTCTTTAAGCTATAATATTCTACAAAC
ATGTCATTGGGATGATCATCTGTGATTGAAATTTGTAAACAAAGTCGAAA
AAAAAAACTTTGTACTCGACTTTGTGTCACAGTGAAAAGTTCTTACCATC
AATGGGGATCAGGCCAGCTTGTGCGGAGCAGTAACCTGTAAAAAAATTGA
TATAAAAAGTTTTAAAAATTGAACAATGTTGTTTGTTTCTCACTAATAAG
ACGAAGGCGTATTTGCCTTGCTATTTTGACCGATTTTAAGAGAGTTCCAA
GTTATGGATAAAGTCACCGAAGAAAGCGGAAAACTTCTTAAGTTAATTCG
ACATTCAGAGGTTTGAGCTATGAAGATTTGACTGTCATTCAAAAAAACAA
TATATCAAAAACAAATTCTTACCAATACAAAGAGCAAGTAGTATAAAGCT
GTATTTGAAAGCCATTTCGTTCTCTTGATCGCTGTAGTTGTGTTGCGTTG
TAAATTAATAACTTTTTTATGAATACACCAGCTGGTTAAACCGAATGCAC
TTATATACCCTTCAAACCACTTAAGTTTAAATTGGTTACTTTCTAAGTTG
ATTTAATTTCGAATCCGTTGTCAGACTAATAACTTTCGTTGTTTAATTTC
CATAATTACAAATTTTCTGAACTTTGATTAGTTACTTCGCTCTTTTGAGT
CAATATCTTCCCTTTTGTTGTCGTTAGATATATTGCGGGGTAGTAATTAC
CGCCTAATTTCGGCCGATAAATCGTCCTTCGCTTTCTTTTGCACTCATTT
TTGACCTTATAAGGTTTGGAATCATTTCTTCCCACAAATCACAAATTTTT
GATGACATTCTTTGACGACAAAGAGGAACATCTTTTGGGTTTCTGCATAC
AGTAGACTTTTTCTTGATACTACTGATTTCTTTTCCTTTCTTTCGAAAAG
ATTGATTGTAAAGTCCCCGAGAGGGGGGCACTAAATGACCTACCATACGT
GTAGTAAGGGTATATTTTCCAAGCTTCCCAAAAAGCACTCTAAGGGTCGA
AATCATCAAAGATGAGAAACATTGCACTTTTCGAAAATCTGACCATAATT
TGCCTGAAAATGGTCAAAAGATTTCAAGAAAAGCACTGTAAGGGTCGATT
TTTCGCTCAAATTTTCTTTGCACTGTAAGGGTCCGATTTCAAAGGTTATC
CTCTTTTTTTGACCAATCTTGCTCTACATCTGTGTCATTCCAATGTGAAA
AAGCTTGTTAATACACTCTTCTCGAGATGCATAAATTTATTGTTGTCCTC
GTTTTCAAACAGATTTCATTGCTATAAAATTACATATTCACAATGATAAT
TGTGTTGTTTACACCTCGTGAGACATTTTGAATCTCAAGTACTTTTGTTT
TAGAGTTAATGTTTGCCTTTTGGGAATTTAAATTGGTTTAAATGTGTAAT
TAAAAAGGAGGACAACAATAAATTTATGCATCTCGAGAAGAGTGTATTAA
AAATGATGAGTAAGCAAACGATATCATTCTATTTGAAAACAACACCTTTA
ACTACTATTCTTCACAGTTCTGAAGAGCTAAAGTTTAAATTGTATAATAG
AGAGGCAAAATAGTGTTATATACAGGGTGTCCCTAATAAAAGTATCGAGT
TTGAACATGCGATTGAATAGAAAAGTTTGTGTGTGTTATCGCTAAAATAT
AATAACGTTCTCCATCACATAGGCTCATTACAAAAGGTATAACTGACAAA
GAAAAAAGAGGGAGAGCTTAAAATACAATTTTGTGAATACACACTTAAAA
CTTTCTACTCAATCGCATGTTCAAACTCGATACTTTTATTAGGGACACCC
TGTATAGAGTGATCAGATGAGTTATGGATGCATTTGAATCATGGATGTTT
CAATTATGCAACTCGAATTGAAAAAGTAGCCCCTGAGACTTGGTTTATTG
GAGACCATGATAAATTAAAATGTGTGTCGAGACTTGAAATAATGCACTCT
CGAGGAACAATCTTCCGCTTTTTGCACAATTTGATTTGATTGAGATGATT
GTGCAAAATTTTTAACGACTTTTAAAAAAAGCACGAGGCTCGTTAACAGC
GCGTATATCGAAACCACATAATCTTCATAAATTCATCATAAGGACTTTGA
TAAGTTTTACATAGCAAAAAAAAATGAAGTGCTTCATACCGGATATGTGC
GATCAAGGGCTTCCTTTTCCAGTGTTAGAAATTCTTCCGTCTCAGACGGA
TTTTCGTCTATATATAGTATATAAAGCCTCAAAATTCGCCATAATTTACC
AAACTTTCAAGAATATGTGACAATTAGCTGTGTAAAATCTATTTCCTGTC
TCAGACGAAGAAAGCCTTGCTATGACCACTGCTTTTCGCACCTTGAAAGC
AAATATCTCTAATCTCTAATCAAATTGACCATAATTATATTGGGGTCTAC
TGCTCTTAGGGACTACCATAATCAAAACATAAGAATCTTCCTCGATAAGG
GTTACTTTCTATTTTTGGTTCATACAAATTGCCACATAAACCTTGTATCA
CTACCCCGGGTTGAATCCTATCTCCATTCAGTAAAATTGTGTACCACCTA
CAGTGTAATATCTCAGAAAACTGTATACCTTGTCCTACTAGAATTGAAAC
GAAGAATAGATTTTATCCCCTCGATAACTTTTTTTTTGATCAGATAGATT
TTTGCATACAAATACAAAGCATAACGATCGGATAGTCAGAACTTGTCAGA
ACTTGTTTTATGATCGAGTTAAGAGAGCAGTCGGTGTTATGAGCCCAATC
GCACTTTAGTGGAACCAATGTTAGATTATTATACATCAATTTCTTTGGAC
TAAAACTAGAACATAAGCCAGAATAAGCGTGTTTCTAAATTAATTTGATT
TTCGAATCCGTTGTCAGACTAATTACTTTCTCTGTTTAATTTCCATAATT
ACAAATTTCTAAACTTTATTCAATGGTTAGAACTAGGACGGTATCTGATC
GTCTTCGATCCTCTAACTTTCGTTCTTGATTAATGAAAACACTCTTGGCG
AAATTCAATATATTTATTTCCTTCTGTTCTTGTTAGATATATTGCGGGGT
AGTAATTACCGCCTAATTTCGGCCGATAAATCGTTCTTCGCTTTCTTTTA
TATTCATTTTTTACCTTATGGGGTTTCGATTTTGTAGAAATCATTTCTTC
CCACAAATCACAAATTTTTGACGACAAAGAGGAACATTTTTTGGGTTTCT
GCATACAGTAGACTTTCTCTTAATACTACTGATTTCTTTCGAAAAGATTG
ATTGTTTAGTCCCCGGGAGGGGGACACTAAATGACCTACCATACGTGTAG
TAAGGGTATATTTTCCAAGTTTACCAAAGTGCACTCTAAGGGTCGAAATC
ATCAAAGATGAGAAACATTGCACTTTTCGAAAATCTGACCATATTTTGCC
TGAAAATGGTCAAAAGGTTTCAAGAAAATGCACCGTAAGGGTCAAGTTTT
CGCTCAAATTTTGAAAAATTTTGTAAGGCCTAATTATGGGCCGCACGTAT
GGTCGTTTTTAATCGAGTGCCTCCCCCCCCCCCCNATTTCATTTCAGGAC
AGCCCCTAAGACTTGGTTTATTGGAGACCATGATAAATTAAAATGTATAT
CGTGACCTGAAATGTACTCTCGAGGAATAATCTTCCGCTTTTTGCACAAT
TTGATTTGATTGAAATGATTGCGCAAAATTTTTAACGACTTTTTTATTAA
ACACGAGGCTCGTTAACGATAGCGCGTTTATAGAAATTTCACATCTCCGT
AAATAGACCTTTTCATAAATTACGTTACAAGCATCACTTACCTCGTTTTT
AAATTATTGCCATGGTGATTAACTCCGAGCAGATTTTATTAAAACTATAC
TTCTTATTTATAAAAAAATCATTTAGAGATAATCACCATGGTAATTGTTT
GAATACGAGGCAAGTGATGTTCGTGACGTAATTTATGAAATGTCTATATT
CTTAAGGATTACGATAAATTTTCATGGGTAAAAAATGAAGTGCTTCATTT
CGGGTATCTCTACGATTGAAGGGTACCTTTGCACAACCACCCTGAAAAAA
GAGAGTTTTTCTTTGGCGCGGACTGGAAATTAGTTCGAATTTTAGAAAGA
TTCGAATAATAGACGTTTGAATAAGCGAGAGTCTATTGTAGTATCTGATC
AAATTGACCAAATTTTTAGGAAAAATTCTCTCTAAGGGTCTTCCATAATC
GAAGATTTTTTGCTCGAATATACTTATCACCTCGCAAATCTAGTACCCTG
GGTTCCTTTCATTGCAATTATGCACTCCTCCCCGGAGTGAAGCTGAAGGA
GGGAATTTTTGGGTTGATGGAAATATATAATAGTAATTATGTAATCTTTT
GTCCTGTCAGAATTAAATCCAATACCCGCCTTCTTTTTTCAGCTTCAAGA
AATCAACAATGCGAGTAATTTGGCATCGACAAACAAAACAAACACATCGA
ATAACCCTTTCACCTCAAGTTCACAAGCTGCCACGGGCGGGGGCGGCTTA
TTCGGAAACGCCGCAAATAACAAACCCAGTGGTGGTGGTTTGTTCAGTTC
AAATACAAACAAACCCTNGCCTCAAGTTCACAAGCCGCCTCGGGCGGGGG
CGGCTTATTCGGAAACACCGCAAATAACAAACCCAGTGGTGGTGGTTTGT
TCAGTTCAAATACAAACAAACCCTCGTTATTCGGAAGCTCATCTAACAAT
CAAAATTCAGGGACTTCATTATTCGGCGGTAGTGGCAACCAATCAAATAG
TGCGTTCGTTAGCAAACCCTCAGGTGGTGGTTTATTCGGAAGCAGCAACA
CTCAAAGCGGTGGTTTACCGAACCCATTCGCTTCAAACGCACAACAACAA
AAGAATACCGGTGGCGGACTTTTTAGTAGCAGCACCGGAAGTGGTGGAGG
ATTATTTTCAAATAATACCGGTACTAACGCCGGAAAAGGACTTTTTAGTA
ATAATACCGCTTCTAATACGGGTGGTGGATTATTCGGAACTTCGACGAAT
CAACAACAATTGTCCGGAGGAGGGCTATTTTCGTCTAATACGAACAATGG
CGGAGGGCTTTTTGGTAGTTCATCTACAAATAATCAGCCCAGCGGTGGAG
GAATTTTCGGGAACTCAGCACCGAATAATCAGACCAGTGGTGGAGGGCTG
TTCTCAAATAGCACGTCTGGTGGAGGTTTGTTCTCACAGAATAAGCAGCC
TAGCCAAGGAGGAGGACTTTTTGGTGGAAATACTCAGGTGAGACTTTGTT
TTTTCCAATTTTAATTGGGTCTTTCTGTGTAATTTACTTAATCTCCGCCA
TAATGGAAGTAAACATTGGAATTTTTAGAGGCGTTCCCCTATGCTAATCG
AACGTTTGCTTCCATAATGGCGGAAGTTACGTAACTTAACAAAACATGAA
AAACTTCTCTAACGACCCTTATTATAGAACTAGGGATTTCGCACTGCAAA
ATTAGAATAGGCAGGGCGAAAAAGTGGGCTGTCTAAACTAGTGCTAAGTC
CCCTATTTGACGTCATCAAAACTGAAGCCGTTCCATTGTACTTGTTACCT
GTCATTTTTCGTTTCATTTTTCAAATTTCAAAAACGTTCAAATTGTGTGA
CGTTCAAGATGAATACAAATATCAAAAGAAGGCGTGAAAGGTTTGACTCT
GTAAGCATACGCTTTTTGTTTCTAATCTGATGATATTCCTAAGTTAAGAT
AAGCCAAGGTGATCGAATAGATGATCTTTACTTTCTTGTTCATCTACGTT
TTTTGTTTTTATTTTCAGCAACCGGCTCAGGCGGCACAGAACACTAGGAC
TAGTGCCACACCCTCGAACCCATTCCTTAGTTTATCGCAGAAAAGTAAAA
TTCAAGAACAGAAACAAATGACAGAACAAATTAAAAAACAATCTACGGAA
CCTGCCAAAACGTCCGGAATTATCATCTTTCCGCAGTGCACACCGGCAGA
TTTGGTGAAATTTAAAAGCGATAAATTTGTTTTAGGGGAAATTCCCACTT
GCCCACCTCCAATAGAGCTTTGTAGATGAAGAGTTTTGTTGGTTGTGGAT
AGTGGTGGAAAATCTTAATTCTTTAATGGACAANAAGTTTTGTTGGTTGT
AGAAAGTGGTGGAGAATCATTCTTACTGGACAATATTCTTGGCAATTTGT
TGATAACACGAATAACTTTCAAAAATTCATATTGATAACGGCTTGAGGAC
GAATTGAATACATAACGACTGATGCGTCATTTAACAACCTTCTTATAACC
CTTTTGTATGAGGATTTAGTGGATTGCATTTAGAAAGTAATACCTAAAAT
TTTAAGTTTCTACTTTTTAGATATAAAAACTCCAATTGTATAAAGATTTG
CACTAAAGGCATCGAAAACAGTCTAGTGCACAGACAGTAGAGTGTTTATT
CTAGTGAGGCGAAAATAAAAAAAATGTAGTGTTTCCGGAATGCGGGTGAA
GGAAAAAGGCTCTCATGCGGCCGGTCGGAAAAATTTTGTTTTGCTATTTT
TGATAACTTAAGATCATTGAAATAGAACTTTAAAGATAACTTTTATGTAC
AAACAGTATAAATACCTAACCAAACGGCGTTTGATAGATTGAACAGTCAA
CTTGATTTTCTTTATGATAAACCATATAGATGAACCCATAGTCTGCGGCC
GGGTCAGAAAATTTTGTTTTTTCACCCGGCTGGTTTCCGGAAACACTACA
TTTTTTATTTTCGCCAGATGTACTGTTTTTGACCCACATCTCGTTATTTC
TCAATGAGTATTACCTGTTACTGATGTGAAAGTATTAAGATTCACCGGTT
TTCCCTGACCAAATATTTTGACCAACTATTCCTCATTTTTGTATCCCTAT
CAAAACTTTCCCGATGAAATAACTCGGCTTTTTCTCACGACGTGAGGTTT
AAACCATTCGGAATGATCCAATCGAGCTAACAGAATAGTGATTCGTGGGT
TCTTTCTGCCTGACTTTTTTAATGCTTGTATGCCTATTTTAGCTTTGTAC
CTATTTAATAATTAATACGATTATTTCAACTGAATAGAGATTGAAAGATG
CCGTCTATTCTTTAATCAAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006661XLOC_006661Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011860-exon-sc0000133-1575043694:273389..273550TCONS_00011860-exon-sc0000133-1575043694:273389..273550Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1575043694:273029..273156TCONS_00011860-exon-sc0000133-1575043694:273029..273156Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1575043694:272140..272318TCONS_00011860-exon-sc0000133-1575043694:272140..272318Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1575043694:271023..271117TCONS_00011860-exon-sc0000133-1575043694:271023..271117Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1575043694:270341..270417TCONS_00011860-exon-sc0000133-1575043694:270341..270417Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1575043694:269326..269403TCONS_00011860-exon-sc0000133-1575043694:269326..269403Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1575043694:262301..263558TCONS_00011860-exon-sc0000133-1575043694:262301..263558Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1575043694:260879..262182TCONS_00011860-exon-sc0000133-1575043694:260879..262182Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1510915933:273389..273550TCONS_00011860-exon-sc0000133-1510915933:273389..273550Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1510915933:273029..273156TCONS_00011860-exon-sc0000133-1510915933:273029..273156Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1510915933:272140..272318TCONS_00011860-exon-sc0000133-1510915933:272140..272318Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1510915933:271023..271117TCONS_00011860-exon-sc0000133-1510915933:271023..271117Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1510915933:270341..270417TCONS_00011860-exon-sc0000133-1510915933:270341..270417Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1510915933:269326..269403TCONS_00011860-exon-sc0000133-1510915933:269326..269403Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1510915933:262301..263558TCONS_00011860-exon-sc0000133-1510915933:262301..263558Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1510915933:260879..262182TCONS_00011860-exon-sc0000133-1510915933:260879..262182Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1491911889:273389..273550TCONS_00011860-exon-sc0000133-1491911889:273389..273550Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1491911889:273029..273156TCONS_00011860-exon-sc0000133-1491911889:273029..273156Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1491911889:272140..272318TCONS_00011860-exon-sc0000133-1491911889:272140..272318Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1491911889:271023..271117TCONS_00011860-exon-sc0000133-1491911889:271023..271117Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1491911889:270341..270417TCONS_00011860-exon-sc0000133-1491911889:270341..270417Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1491911889:269326..269403TCONS_00011860-exon-sc0000133-1491911889:269326..269403Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1491911889:262301..263558TCONS_00011860-exon-sc0000133-1491911889:262301..263558Clytia hemisphaericaexon
TCONS_00011860-exon-sc0000133-1491911889:260879..262182TCONS_00011860-exon-sc0000133-1491911889:260879..262182Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000133supercontigsc0000133:260879..273550 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.171805	0.167537	0.680843	0.380628	0.642131	0.0660456	0.467598	0.561332	0.171788	0.147542	0.0802535	0.134866	0.149338	0.0829127	0.0975566	0.256412	0.128973	0.132194	0.0913163	0.191112	0.0830554	0.243069	0	0.179091	0.295183	0.397588	0.353368	0.754248	0.19069	0.0971416
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011860 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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