TCONS_00011765 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011765
Unique NameTCONS_00011765
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3010

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011765 ID=TCONS_00011765|Name=TCONS_00011765|organism=Clytia hemisphaerica|type=transcript|length=3010bp
CTTGTTGCTGTTTAGTTAACGCAGACGTACATCGAGTTGAAACGAGATGT
CATTGCTTCGAATCAGAAAGATTTTCACGGACACAGCGTTCCAGAAGCAG
ATAGAGGATGTGAAGATTATTTGTTGTTATTCATCGCATGGATGTTCATG
GGAAGGAACCATACAATCTCTTACCGAGCATAGAGAAGACTGTGAATTCG
TGAACGTGATTTGTGAGAAAGGCTGTGGAAGCACTTTACTCAAGTATCAA
TTGGAATCGCACATTTGTTTGGACCCATCTACACCGTCACTACAACAAGA
ATTGGCACTTTGTAACTCAGCCTTCATGGAGAACGGAGAATTCGTGGATG
ATCACGATTGCACGATGGAATCACGTCCAGGACCTGAGGGTGAATCTTCA
AGAACAATGCCCACTTCTTCAGAGGAACCAGCATCGCCAAGTATTTCAGG
AGATGGCGCttctttgaaattctgtaaatttatcaagcTGGGTTGTAAGT
TCAAGGGAAATCGATTCGAGGTCGATTTACATATGGATATCGCTTCCGAG
ACACATTTAGATCTGGTCTGTAAATCTATCAATGAAATCAAAACAGAATA
TATTAAGAAAGAAAACAAGGTGATAGCGAAACATGACAATAAAATTAAAC
TGGTGCAAGATTATATCTGTAAGCAGAATGTTGTTATCAAAGATCTTCAC
GAAACAAACCGTACGTTGGAAACGAACTCAAGAAATATGCAAAACCAAAT
CAAAGACTTGGCGTCCAAAACGGAGATGTTTATGGAGGAAATTACTCGCT
TGAAAGTACAGGCCAATCAACTTCAAGAAGAAATGAATGAATCACGTGAC
ACTAATTTCACTGGATCTCTTTTATGGAAGATTAAGAACTTTTCGAAACA
CATGCAAAACGCAGTTAATAAAACGGAACTTTCAGTATACAGCCCACCTT
TCTTTACCAGTCGATACGGGTACAAAGTAAGGGCGCAACTTTTCGTAAAC
GGACTTGGCTCGCAAACAGGAGAGTACATGGCTATATATTTCCATATTCT
CCCTTCAGAACATGATGATATATTAAGATGGCCTTTCAATCACAAAATCA
CTTTTTCTCTTCTCGAACAAACGCCAGACCAGACGAACGTGACGTATACT
TTAGTGCCGACGCCGAACGAGGACAGTTATAAACGGCCTTCGGATAAAAT
GAGCGACGGAAAAGGTTTCAATCGATTCATTTCGTTGGACGCCCTGAAAA
AAGGGAAGTACATTAAAAATGATTCGATATTTGTCAAAATTCGAGTTCAT
TGTAAAAATACGAGCAGGAATCACGAATCTTAGTTTTTTATCTAAATTAT
CTTAACTTATCTTTTGTAAAATAGATTTTCAATCAATCGCTTTTTGAAGC
CCGTCTCTAGTCGAATAAGCCATAGTTCAGGCGAAATATATGAAGTCACT
GAATAATTTCATGTTTTGAGAATTTCTTGGTTTCCTTCGGGAAAAATGAT
GACGACAacttgaaagattgttttagCCAGATCGATTtgtctttttttga
ctttctgtAGAATATCATCTTAAAATAGATCTATattaatattatattat
aaGACTGTAAATTTACAATATAATATTTCTACGTTAAAGAATTATTCGAT
GCATTTGAACATCATCTTGAAAATTAAGAAGCACAATTGATCAATAGAAA
TCAAACTTCCGAAATCGCCTTGGAGAAAATACATGGAGTTATCTTCGATA
TTCCAAGGAATGATCGAACTTCAGGGTTTAAGAAAACTATCACCATCCCC
ATATATTCACAATGCATAATCCATGATAATGCGCcaagaacaaagaaaat
gtcttACTCAAGATTGCAAATAAAATTCAATAGTGAACTTCATTCCCGAG
GATATTTGGACTTGTATGACAAATCCGTTTGCTCACACTAGCCAAATTTA
TCATccaaaatatgttttcatgaTCGATCTTTTGCTTTGCGTCTATTAGT
CGTTGGGTAAAATCGATGAGTCGTCGTAACGACATCAGCTTTGTCGTACT
TTCTGGCAGGTGGCAAAAATTCTTTCATGTTATCTTGAGGATATTTCTCC
TTGATCTTTTGCCGTGTTCCGTACAGCTTCATATCATGACGTAATTTAAA
GTAATCCATGACGTCATAAGCAATAAGGACAGTCAGTGCAAGAATGACCA
GAAGATCTTGAACGTCCatcctcaaaatgttctttcaGTGGAACTGCTCC
AAACCATCAATCATTTTCTCCCTTTTTCCTTCAAATCGGTTTTGATATCT
TAATATTAAAAGTGATTTGATAAATAAAACCTTAATGTTAATCCTGGCCC
ACTAACCCCTGTTATTCCATTTAACCTAAACTGTGAAAACGTTCAGCAAA
CTGTATAATCAAGATAGGaactgtaaaaataaaactgaacGAATTGATCA
CTTTCTTTCTTCGACCAAAAGTAAAACTTCAGCCATCGCCAATGTTTCCC
AAAATTGTTTACCATTTTGATTTAAAGTTCCAGACTCATTtcttcaagaa
attgaaaacttgaaCTTCAAGAAATCTGATCAGAAAAGATCATCCCAAAA
GTTTCTATATCATCTcataaaagaaattttgaattctCGTCTTATTTTGA
TGAAGTGAAGTGAGacaagaaaaaagagaaaaggaaGCATGAAAAAACTG
AGGTTTTGAAGAAAGGAAGACAAAAACACCTGCACCACTAACTAGACTAG
AAGTAGTTATCACTTTCatctcttttattttaaagtttatcatatttcaa
cattttttaccAGTCTGAACTTCCACTTCCAAAACTGTTTACTTGTCCTA
GCAGTATGAACTTAAAAACTGTAATAAATCGATTGATAATTGATGAAAAG
AATTCCTACTTATCAATAAATTCCATTTGATTCGATGATGAATTTACTTT
AAATGGGCCCCACAGTTTGGGTGACAAAATGAAAGTTACGTCCCAGTACA
CCAATTGAAA
Run BLAST on NCBI

transcript from alignment at sc0000132:221453..235072-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011765 ID=TCONS_00011765|Name=TCONS_00011765|organism=Clytia hemisphaerica|type=transcript|length=13620bp|location=Sequence derived from alignment at sc0000132:221453..235072- (Clytia hemisphaerica)
CTTGTTGCTGTTTAGTTAACGCAGACGTACATCGAGTTGAAACGAGATGT
CATTGCTTCGAATCAGAAAGGTTTGGCTTATTTCTCATCCATAATTTCAA
GGCGTATTCCCTTCATTAGTCTGATTAGTCAATTCAGAGAACCAAAATAA
ATGTTTTCTTGTTGGGAAATAATAGAGAGTGCTTTTCTTCCATATTTTTT
CTTCAGTATTTATTTGTTTGAATAAAGTTCATACACATCATGAAGTTTGA
AATGAGTTTTTGATGTTAATACCTTGTGTGTTGGATCGTGTCTTATTCAC
GAGGCAGTGCGTTACCTGAGTATCGTGGGAAGACTTCAGTCTTTTTAGAG
GTGCTTCTGTATTTAGATAAGCTTATGTAAACATCAGAAGCTTAAGAAAG
TTTGTTTCCATAATAAAAGCATCCACCCTTAAGCAGTTTAGTCAGGCGAT
GCTTTCTTTTGTTTGTTTTTTGGATAGTTATGAGAATCATTTTTGATGCA
ACCGGTTTTATTTTTCCTGTTCTTTACCAACACCCTTTCTCCAACACCAC
CCAACAATTTTTAAGAATTAGTTTCGGAATAACCAAACATCAGTTTGATC
AATTCTTGTGTGGTCCGACTATATTCTCCTTTTCTGCGAGAAGTTACCGG
ACTGGTGAGCAAGGCTACGAACTCAGTATCATGTTGATCCAATTCAACCT
TTTTTTCCCTTTGTAACAAACAGAAAAATCTGTAAACTCGTCTTTCTTCT
CGTAGATTTTCACGGACACAGCGTTCCAGAAGCAGATAGAGGATGTGAAG
ATTATTTGTTGTTATTCATCGCATGGATGTTCATGGGAAGGAACCATACA
ATCTCTTACCGTAAGTCTCTTCATGTTCTTAAGACAGTCCATTGGAAGGC
TTTAAAGACACTTTCATTTATCTATCTGCTAGACATCATCTTGACCCTTG
ACCAACCTCACGCCAGAACTGCGAAAATAAAGACTTTTTGAAATGTTAAC
GTAAACCCTTAGCAACCAAAATATAGACGATGCATCGAAAATATTGACCA
CGAAAAATTCTTTTTCGCAGCCGGGGAAATTTCTTTTTGTTGAACAATTA
GAATCGTTTTGAAATCTTTGCAAACGACGAGCAGGTGGATTAGTTTTGGT
GGACAGGATATTAAGAGTAATTACAAGTGGAAGGTGGTTTTCGCTCAACG
AAATGTTTGGAATTGGCTGCATTTCTTTGGTTTCCTTCACACTCGATTAC
TGTTCGTCTCCATCGTGATAAGTACCTTCATTTCCTGTAAATGTAATCTT
TCGATTGTCTTTTGAATTTCAAGTGAGAATTTTAACATTGCGATGGTGGA
ATCTTTACTTCGAACTTCTAATAAAATAAGATGACTCATTGAAAACTGGT
GGAAGGTCATGTGGCAATAACATCATATACAATTTGTGTTTATCGTGCAT
TGTTACACAAACTAACAAACAAGCTGTAGTGTGTTTTGCTTTACGAGAGA
TGGAAGAAGGCCGCGCCAAGTGAATCCAATTTTCAAGAGTTTGGTTAATT
TTTGTTTTCCCACAAAATATACTTCTCTACAATTTTCTCACGGACAAGAA
AATTTTGCTTTGCTATCGTTATTTAAGCCATCAAAATTACCTTATGTCGG
AGAGGCCTTGTTAATTTGAGGCAACTCATCTTTTCCTTCACCGATATTTG
ATTTTCGATTGAGATTACCCAAATAAGAAAAGGGGTTGAACGCACGACGC
AATGGGATTACTTGTAGCATGGTAATTGTAAGTTAAGTTCAACCTCTTCT
TAGTGTAGTTGGCTTAGGAGTTGAACGAGTGCCAAGATTTCAAATCTATT
TCCTTTTTGTGAAAAGTTTCTCTCCTCTCACGAAAATACGACACTTTTCA
AATACAGCAAAAGTAACTTGTTTAAATCGTTGTATTCTCAAAATCATTCT
TCAATCTGATTTCCATTTCTGTTCATCCAGTCAGTTTGTTGTGGCTGAGA
TTCTCTACTCTTACCTTTACATTGATCATGTTTTTGAATCAGAAGAAAAA
AGAATTTATCTGAGTAACCATTTATATTAATAACGGATCGGTCACCTAGC
AATTAGTAATGATGAGAATTGATGGTCATTGATTGGAAGTGGTCTTTACA
AAACTCCTGCTGTTCTTAATCAATTCCATCTGCAATGATGGTGAAGGGAA
ATAAGGAAAAGTGAAAAATAGAATCTTTTCATGATCTATTAGTTCAAGAG
TGTAATGTTACTCTTTCTGTTGTTAATCATCAGTGTCAATTGAAATTGCT
GTAGTAGAGGCTGCGTGTATTTTGAATTGTGTGAGTCATGGGGAATTAGC
TTTAGGTCTCAATTCGGATTAATACACAGTGATTTTATCCTTTCGTGTAT
CTCATTTCGTCAGCAAAGTTCATTGAGTTCATGAAAAATTGTAAAAAGCT
AAATTTGCGTGTAGTTGCGTGTTAAAGACTATTTGTTACACGAGAGACAT
GCAAGTGACGTGGAATTTCGAATGGGATTTGATTTCTAGTATTTTTCACT
TTAAAAAGCCACCAGCTTATAGGCCATTTCACAGTCGAAATGAATCATGG
GTAATCAGGACTGATTGCGTCCTCGTAATAACGGCGTCCCGTTGACTAGA
CTCAAAAACATCCAAAATTTTAGACCAATGGAAAGTCGTTATATACATAA
GCGGTGGTACGGTGGTATTACCCATGATTTCTTTCAGCTCTGAAATGGCC
TATGTGGTTTTTATATATAAGAACAAACTATATAAGAACATAAGTCTTCG
ATGGCCAAAATATTAAGAACAAGTTAAGAACATTTTAAGGCTTTGCAGAC
TCCCAAACTAACTACCGATGTTTAAGCTTCCTTAAACATCGGTATGATTA
TTGAATTGAATGGACAAAAATACTCACAAAATGGTGAAAATAAGAACATG
TTAAGAACATTTTTAGGCTTGAAACTCAAAAAGTTAAGAAGATCTAAAGG
CTTATATAAAAAGCCTTATAAAAAAACGTGTATGCGTAAATTTAAGTTTT
TTTCTTCAAATTAAGCGCACTTGTTAACAGATAAAGCAGGATAAAGTGGC
ACGCGGATATTTTTACCCTGATGAATGAAAGGCTGTCAACAAAAACACCA
GAACTTCCTGTGGTGAATTCGAAACGAACTGTTGACATTTTTCTTGCCCT
CTTCACAGCGCATGGATGGTGCTCTTTGATGATAGTCCTCCTTTAAACAA
GTGGTTTACGCTTTCTAAAGGGTGCTCTTTACCAAAAATCATGATTTTTC
TGAACTAAGATAGATTACCTCACAGGTGTTTATTATGCTTTTGGAGCTTG
GTTTGAATTTTTTCAACTTTGTTTTTCGGTATCATTAACAAAGCATAACT
TTCCTGAAAATTCTTCCGGTCATAAGTTTGTAAGCCGATGTTATCATTAA
TTTGAGAAATTTCATATATCTTATTTTCTTATATCAACTCTTTTGTTAAA
TTGTTAAACATGGTCATTTTTTTCGGGGAAATTGTGCACCCCTAAGTAAG
CAATGATGTATATTGTAACTATGGGATTCAGGTCGTTAACAACAAACGCA
TCGAAAAGGGGGGAAATGGTAGCATTCTTTCGAGCTGAAGAATAACAAAA
CACTTGAAGACTTCAAAAGATTTGAAATATAAAGTACACTTGATTACAAT
GTCTCGCAACGTCATTTGGTCTCCTCTTTACGACGTCTTGATAGAAGTTC
AGTCAGTTCTCATTGTTCGTTTGCATTCAGTTTACTTGTGGGCTGCTTGC
AGATGGATGGGTTTATTTTATTTGTTTCTGTATGAAACGTGATTTTTTTA
ACATTGATTATTTTTTTATGGTTCGCTTTCATTTTACGCTAAGCTTAATA
AATTGAGTTGAATAATGTATAATACACCGTCTTGTGTGCATACCACGAGT
GACTTACTATAGGTATTTGTATTCACAAATGTCAAGCTCGCTTTCTGTTG
CTTGTGGTCGGATATCCTTATCTTTCATGGTAAGATCAAGAATGTCAGCT
CGCGAAGGAAATGCTTTTTGCACTGAGTAACCAAAACGTCAGCAAATGCG
ATTTGAATTTTGACAGGTTTTTTGACCGCATAAAACCTCAGTGTTAACAC
ATTGCTCAAACACTCCTCGAGATTGGTTCGTAGGCGTTCAAAGAATGTTT
CTCTCTCTTATTTTTAGAGTTAGTTGTAAAGGTCTAAACCCATGAGGCTA
CAGATATATCGAAGAGCAGCGCTGATTATTAAGCAACGATAATAAAACAT
AGATTGATTACAGGTCCCTGTAATGGTTATTGTATTCTAAAGATTATTTG
AAATTTTGAAATTTTGAAATACATTCATTGAAAGGGAAGATTTTGATGGA
AGAGTTCTGATTGGTGCAATTGATAAGCCCTAATGTGTGCGATATCTGAT
GCAATTGGAAACCTAGCTCTGAGAATTTACACAAGATATTTTACAAAGGG
GATGGGGAGGAGCTCTAGGACCTGTAATGTGTTTGTTTATGGATTAAGAC
GCGCTACATCATGAAGAGATCACTTGAAATAGATTTCTGACCTTTCTTAA
TGAACTCTATTTGTTACTTGAGCTGTCGATGAATATTATTCGTAGTCTTT
ACTTGAGGATCAGCTCACAGTGGCTTTAAAATGACCTTTTTATCTTACTT
TCATTATGTGGCATGACTTAAAAAAACGAGTTCTAGTTCCTTCCCGAACC
TGTATGAACTGGTCTTTTATACTTTTTCTGAATGCTATTTTGAAAAAAAC
CTCTACGCATCAGTTTATAATCCTTTTTAATAGAATCAAACGGATTAAGG
CAACGGCGACATTTGAATTGCTTTCAACTCTCTCTTGCTCTCATTTATTA
TATACACTCAATGACAGAAAACCCTGTTCCTTTTTCTTGAAACTTTTTCA
AAAAAATAACGGACGACTTGAGATGATTTTTGAATGATTTTTGAATTTTT
ATAAATACTTGGGTGGTTTTAACTGACGAGTAATGGTTTGAGGAGATGTA
CACACCGTAATTGCGATTAAGAATACGATTTTAAAAAGCTTTTTGAATGC
TGGAGTGTGTTATGAGTAATACCAGTAGCATTGATATGTGCACCTTGATG
GTAAGGTTTGATAGCCTCATTTTTGCTCACTACTCTTGCATTATCCGCTA
TATCCATTCGACAACTTTTAAGAAATTTTCTTAATTTGCATTTTCAGAAG
GGAACATATTTATTAGAGGGTTTGATTTTATATCAGAATTTACTTATCAT
TTCACTCAATGCTCTATTAACCTTCTCAAAGTATATACACTGAATCTTCA
AAAATGAAATTAAAAATAGAAATATTGACGGATATCTACATCAATTAAAG
CGTTTATAAAAAGTGTCTGTTTCCACGACGATAAAAATGACATCATCTTT
TCATTAAAGTGACGTCATCTATTTTGATAACAGATAAAATATAGGATTTT
GGAACAACAGAGATTAGATGATTCGCGCTTTTGCATGTATGACCCGCGTT
TATAATGTACTAACATTTCGAAATAACCAATAAATGAATGCGAAAATACC
CCCTGTTAATCTACTGATATACTCTGTTTAAAGGTGTATCGACAGGGGGT
TAAATGATGACGCTATCTACTGTTTTCGAAAACGATATAGCGCGCCAATG
TCGACAGATGTTTCATTCGGGCTCTCAGTTTGAACAATATATTTGCTTTC
TTTCTTTCAAAATCATTTTTGTTTTGGCTCTTTGTTCTTTATGATTTGCG
ATGGGTAAATCGCGTGCTGGAGATATCAAGAACTACATTAGATATTCCTC
ATGAAAAAATCGATTTCTATTTTTCACTGATATTTTCAGGGTTTTAAGAA
AAGATCCGCTTATATTTTATTCTATGTTTTTCGTCTTTTCTCGAATAGTT
TGGAACGAGGCAAATATTTTTTTAAAGCTCGTGATTTTCATGTTGCTCAC
TGTTGATCTTTCAGGAGCATAGAGAAGACTGTGAATTCGTGAACGTGATT
TGTGAGAAAGGCTGTGGAAGCACTTTACTCAAGTATCAATTGGAATCGCA
CATTTGTTTGGACCCATCTACACCGTCACTACAACAAGAATTGGCACTTT
GTAACTCAGCCTTCATGGAGAACGGAGAATTCGTGGATGTAAGTAAAGCT
TTAATGTATATTTAGTATGAGATGGTGGACTAATTTGCCAAATATGTTAC
TGGTACAACAATCACGTTGTAGAGTTTGAATCGGTCACATACTGGTGTAT
GTACCAGAGAAACTCACTTGCACCTCGCAGCAGATTTTTAAAATCTCATT
TTCAGTTTATTAAATTTAAAGCAAAGCTTAATTCTTATGCATCATCGCAA
AAGCAAGCGCTATGATTCACGACTATTATCAAGCCAGTGTTTATCTCCTT
AATAAACAAACAAAGGGGTTATTGAGATGTGCCTTCAAACCTCACCATTC
GTCACTTACAAGTCAACTCGATTTCGCAAAAGATTTCAAAGGATTTTCTT
TGATACGTACTCGTGAATCAGCAAGGATAATCTAAAAAAAGTTTGTTTTA
GTGGCCGCTATTTTGGACTCCTTGATGTTTGTGTGCAAGAAGAGAGACTT
TTTATGAAGAGTTGTTTATTCCTGCTCAGACAATATTTCACAATATCACG
ATGGATGTTTGGTGACGTCTTCGTCTTTTTACCGGCTGTTGTTTTTCTGA
ACAAGCTTCTGTTCCTTTTTTGATAATGGAACGAGGAAGGACCCCCTTGG
TCGCTTACAAGGCGCCATATTGTGTCTTGTTGTATGTCTCGTATGTTATA
CGATCGAATGATGTATGATTGATAAAATAAAAAATATATGTGAAGTTTGT
TTAGTATCATGTTCAGTCTTCTCATCTAAGTTGTGAATCAATCTTTCTTT
CGATCGGTCGATCGGTATCTACAGACGTTCGATCATGCTGTGTGATCTTA
CGTTGATTCACCTTCGCAATAAGAAACAAAAAATCCAGTTTTGCACAGTT
TGTGTCAAGAGGAGAAATTGATTTTGGAAGTCAAACAATTTATAACGTGG
CAGAAGATTAAGAGGTGATTTTGGGGTAATCGATTTGGTACTTGAGTTTG
TGACAGAGTGACTGCCTTTTTTTTGATTAAGAGATTTACATTTTTAGTGA
GTGTTGATTGAAGAATGAATGGATAAAAGAAATTCGAGATGACAGCCTGC
TTCATTTCTGTGATGATTGATTGCTTAGCTTTCTATTCCCTTGCTTTTTG
ATGCAGGGATGCTTCGAGTGTTGAGGTCAAGAGGATAGCTTATTTGTTTT
TATTTTGTTCCGAATGTTGAAAAGATAATTTTAAGTGTATATATAAAGTT
GGTCAATCTCAGTTGAAGTTTGAATATGTAAAAGAAAATGAATTAAAAAT
GACGAAAGCTAGATCGATTGACCTTCCATACCACATAAATAGTGAATGGA
ACAAACACCTACTTGGTGACGTCGACCATTGCCAACTGAATTTCAACATT
CACACTTTAGTTAGTTGCCACCTGATTCAATCGGAATTGAACGATTGCTA
AATGTTGAAAGAAAGTCAAGGGAATATTTAAGAGAACTTCTTTACGAGAA
ATTTTACTGTAATTTTCAGAAGATTTTTTAAATAGATAGATGGTGAAATT
ACAAAGTAAGTAGCATCGACCTGAAATTAAAACCTTTTTTTCTAAAAACG
ATGACCTGGCTTTTGATTACTGACATTTTAAATGTTCAGTATTCTTTAAC
TTTCACGTCTCAAAAGCTAACTATCGCCAAAAAGTCGTGACAAAAAAAAA
AAGTTTACGGAAGTTTCGTGACGATTTTAAGGAAAATTGAGGCTGCCAAG
ACAAACTTGGCGTATACAAAGAAACTTTGTTTAGAAACGTGAAATATATT
CACACTGCAAACATTGAAGGTTGGTACAAGTAGAGATAAAGACTACTTCA
GTTGGAGCCAGCATAGAATACAGTATGCTTGAGTTCTAATCCAACTTATT
CCATAGTACTTGAGCAAAAAGAGTCAAAATAAGTTCAGTGAATACTTATG
TGAGAAATGGTAACAACTGATTCNGTCAATCTCAGTTGAAGTTTGAATAT
GTAAAAGAAAATGAATTAAAAATGACGAAAGCTAGATCGATTGACCTTCC
ATACCACATAAATAGTGAATGGAACAAACACCTACTTGGTGACGTCGACC
ATTGCCAACTGAATTTCAACATTCACACTTTAGTTAGTTGCCACCTGATT
CAATCGGAATTGAACGATTGCTAAATGTTGAAAGAAAGTCAAGGGAATAT
TTAAGAGAACTTCTTTACGAGAAATTTTACTGTAATTTTCAGAAGATTTT
TTAAATAGATAGATGGTGAAATTACAAAGTAAGTAGCATCGACCTGAAAT
TAAAACCTTTTTTTCTAAAAACGATGACCTGGCTTTTGATTACTGACATT
TTAAATGTTCAGTATTCTTTAACTTTCACGTCTCAAAAGCTAACTATCGC
CAAAAAGTCGTGACAAAAAAAAAAAGTTTACGGAAGTTTCGTGACGATTT
TAAGGAAAATTGAGGCTGCCAAGACAAACTTGGCGTATACAAAGAAACTT
TGTTTAGAAACGTGAAATATATTCACACTGCAAACATTGAAGGTTGGTAC
AAGTAGAGATAAAGACTACTTCAGTTGGAGCCAGCATAGAATACAGTATG
CTTGAGTTCTAATCCAACTTATTCCATAGTACTTGAGCAAAAAGAGTCAA
AATAAGTTCAGTGAATACTTATGTGAGAAATGGTAACAACTGATTCTTTT
GTGATTTGTGTTTGTCTGTTTTGTCATTTGACAAGTGATTGGAGCAAACC
TAAACATCCGAATGAATCCATCAGTCAACAAGATATGTGATCTCATGTAT
TTTATACCATAACCCTCGACTTTTTCTCTTCGCTTCATATAGTCTCATAC
GCACACATGGCTTGTGATGTGCGGTCGATACATGGTTTTCTATTTTCGAA
TGGGTAGACAAGAAATATAGAAGGTTTTGAGTTTGGTCAACAGTAGACTA
GAGTAGTTTGAGAATATAGGACTCTTCGTTGCTTTAGTGACTGTTACCTG
ACACTGTTATTATATTTGGTTCTTGTGAAAATATTTTTGTATGAAAGTAT
GAAAGAATTAAAAAACAAAACGGGTATGATTCGTTTACGAATGCAGAAAT
ACATGGAGAGAATAAGCGGTGATGAAAGTGCTGGTAGTGCTGGTGGTGGT
GGTGCTGGTGGTGGTGGCAAATATTACGCCAGTGAAACAATCACCGAAGA
AAGTGAAAACGATATCGACGTAAGTTCATGGTGTAAAGAAAGAAAGGAAC
TTGAACTCTTTTTTTACTTACTGGGGTCATTGAGGCTCAACCGGATTGTA
ATTTTACTAATTCTCATTTAATTTCTACTTGCAGGATCACGATTGCACGA
TGGAATCACGTCCAGGACCTGAGGGTGAATCTTCAAGAACAATGCCCACT
TCTTCAGAGGTAAGGGATGAAACTTGTGACGGATACCAAGGGATGATGTT
TCCAAATAGGGTTGCAAATGGCCCCACACTTCGAATGGTCTTTATAAGGA
TTACACTTCATCTTAACTCAATGAACAAATGAAACTTTTGAGGATGATGA
GGTTCATTGACCACAAGGGGCGTTCTTTAACGTGCTTTATGAGATTTTTA
TGACCAACAAATGATTATAAATTTGAATTTTTTTCTCATGATTTCCCATG
GTATGGCTAAACTATGAATGGGTTTAGAAGTATTGAGCCCTTCAACGTTA
TGATTACATGACATGGGCCTGTTCTGTACGATTTCTCTGTTGATAAATTT
TTGTAAAAGAAGGTGGTTCAATTCCTTTTTTGAAGTAAAATGTTTCTTAG
GATTTGTCCGTACAATATCTTGTTTCAGTTTTGAAGTTTGAAACTGAGAT
TAGGCCAAAGGGGAAAGATTCTTTCCTCTAGGGAAACATAATCTTTGGGA
AATATTTGAATTCTAAAGAAAGTTTATTTCTCTTTTTTTCGTGAGCAGTG
AAAAATATCATTTTTCGTTATGAAGGATGTCAAAGTTTAAATCCCTTTTC
TTCATCCATCCATCATCAATTCTCTTTTCCATTCTCATAATCGGTTGAGA
TACAACACAGATGTTTTGTGTCTTTCTTTTTCCTGTTCCTCAACTGATAG
TATACTGAGTATATCTTGTTCGAGCAAAATATAATGTTCAAGAAACTTTT
TTTCGGGATTTGCTTCAGGGTTGAAACATTTTTTAACGTTTTTTTTTAAA
TTGCTCGATTAACTAAAGGAAACAAGATGCAAAATAACGAACAAAAAGTA
AAATCAACTTTGATATTTTCTGGTGTGAAATCATTATTTGACTGACTCTT
GCTTTATTAAGTTATTGTACATATTAAAATCCCACTTCAATACAACAAAA
TTTGTACTTTTAAAGTAAAAAAGCCTTGTAAGATTAAGAAAACAAACATT
TTCGAAGATCGTATTCTTGATCCCATGTTGAGATAACTTCGTTTGTTTGG
ATTTTCGTTTACAAAAAATCATTAAAATATCAGAAAAAAAGTTAGAATCT
GAAGAAATTGCTTTTAACCTACTAAAATAAAAAAGACTTACCTACGCACT
TAAACGCCCCTTCATTCAAAATCAGTTTTTTATCTGTTAATTTTGTTGAC
AATTGTTGAGATTCTGTCGCAATTTTAAGCTATAGAATTATTATTCACGT
ACCATCTTCCTCCTGTGCAAGAAATTCATTACAATTCTTTTCCTTACCGT
CAATAGGAACCAGCATCGCCAAGTATTTCAGGAGATGGCGCTTCTTTGAA
ATTCTGTAAATTTATCAAGCTGGGTTGTAAGTTCAAGGTAAGAAAACAAC
AGAAATTTCACTTTACAAATACTCGAGTCATGGTGAAAAAAATATTGACT
AACCCAACTAGTCTAAGAATGTGTGACCAATGATGATTCTGTCACTTTTT
TCGATCGAATCGAGATACGCTTACAATCATTATCTTCATTCTCTTCTTCC
TTTTTATTATTCCAGGGAAATCGATTCGAGGTCGATTTACATATGGATAT
CGCTTCCGAGACACATTTAGATCTGGTCTGTAAATCTATCAATGAAATCA
AAACAGAATATATTAAGAAAGAAAACAAGGTGATAGCGAAACATGACAAT
AAAATTAAACTGGTGCAAGATTATATCTGTAAGCAGAATGTTGTTATCAA
AGATCTTCACGAAACAAACCGTACGTTGGAAACGAACTCAAGAAATATGC
AAAACCAAATCAAAGACTTGGCGTCCAAAACGGAGATGTTTATGGAGGAA
ATTACTCGCTTGAAAGTACAGGCCAATCAACTTCAAGAAGAAATGAATGA
ATCACGTGACACTAATTTCACTGGATCTCTTTTATGGAAGATTAAGAACT
TTTCGAAACACATGCAAAACGCAGTTAATAAAACGGAACTTTCAGTATAC
AGCCCACCTTTCTTTACCAGTCGATACGGGTACAAAGTAAGGGCGCAACT
TTTCGTAAACGGACTTGGCTCGCAAACAGGAGAGTACATGGCTATATATT
TCCATATTCTCCCTTCAGAACATGATGATATATTAAGATGGCCTTTCAAT
CACAAAATCACTTTTTCTCTTCTCGAACAAACGCCAGACCAGACGAACGT
GACGTATACTTTAGTGCCGACGCCGAACGAGGACAGTTATAAACGGCCTT
CGGATAAAATGAGCGACGGAAAAGGTTTCAATCGATTCATTTCGTTGGAC
GCCCTGAAAAAAGGGAAGTACATTAAAAATGATTCGATATTTGTCAAAAT
TCGAGTTCATTGTAAAAATACGAGCAGGAATCACGAATCTTAGTTTTTTA
TCTAAATTATCTTAACTTATCTTTTGTAAAATAGATTTTCAATCAATCGC
TTTTTGAAGCCCGTCTCTAGTCGAATAAGCCATAGTTCAGGCGAAATATA
TGAAGTCACTGAATAATTTCATGTTTTGAGAATTTCTTGGTTTCCTTCGG
GAAAAATGATGACGACAACTTGAAAGATTGTTTTAGCCAGATCGATTTGT
CTTTTTTTGACTTTCTGTAGAATATCATCTTAAAATAGATCTATATTAAT
ATTATATTATAAGACTGTAAATTTACAATATAATATTTCTACGTTAAAGA
ATTATTCGATGCATTTGAACATCATCTTGAAAATTAAGAAGCACAATTGA
TCAATAGAAATCAAACTTCCGAAATCGCCTTGGAGAAAATACATGGAGTT
ATCTTCGATATTCCAAGGAATGATCGAACTTCAGGGTTTAAGAAAACTAT
CACCATCCCCATATATTCACAATGCATAATCCATGATAATGCGCCAAGAA
CAAAGAAAATGTCTTACTCAAGATTGCAAATAAAATTCAATAGTGAACTT
CATTCCCGAGGATATTTGGACTTGTATGACAAATCCGTTTGCTCACACTA
GCCAAATTTATCATCCAAAATATGTTTTCATGATCGATCTTTTGCTTTGC
GTCTATTAGTCGTTGGGTAAAATCGATGAGTCGTCGTAACGACATCAGCT
TTGTCGTACTTTCTGGCAGGTGGCAAAAATTCTTTCATGTTATCTTGAGG
ATATTTCTCCTTGATCTTTTGCCGTGTTCCGTACAGCTTCATATCATGAC
GTAATTTAAAGTAATCCATGACGTCATAAGCAATAAGGACAGTCAGTGCA
AGAATGACCAGAAGATCTTGAACGTCCATCCTCAAAATGTTCTTTCAGTG
GAACTGCTCCAAACCATCAATCATTTTCTCCCTTTTTCCTTCAAATCGGT
TTTGATATCTTAATATTAAAAGTGATTTGATAAATAAAACCTTAATGTTA
ATCCTGGCCCACTAACCCCTGTTATTCCATTTAACCTAAACTGTGAAAAC
GTTCAGCAAACTGTATAATCAAGATAGGAACTGTAAAAATAAAACTGAAC
GAATTGATCACTTTCTTTCTTCGACCAAAAGTAAAACTTCAGCCATCGCC
AATGTTTCCCAAAATTGTTTACCATTTTGATTTAAAGTTCCAGACTCATT
TCTTCAAGAAATTGAAAACTTGAACTTCAAGAAATCTGATCAGAAAAGAT
CATCCCAAAAGTTTCTATATCATCTCATAAAAGAAATTTTGAATTCTCGT
CTTATTTTGATGAAGTGAAGTGAGACAAGAAAAAAGAGAAAAGGAAGCAT
GAAAAAACTGAGGTTTTGAAGAAAGGAAGACAAAAACACCTGCACCACTA
ACTAGACTAGAAGTAGTTATCACTTTCATCTCTTTTATTTTAAAGTTTAT
CATATTTCAACATTTTTTACCAGTCTGAACTTCCACTTCCAAAACTGTTT
ACTTGTCCTAGCAGTATGAACTTAAAAACTGTAATAAATCGATTGATAAT
TGATGAAAAGAATTCCTACTTATCAATAAATTCCATTTGATTCGATGATG
AATTTACTTTAAATGGGCCCCACAGTTTGGGTGACAAAATGAAAGTTACG
TCCCAGTACACCAATTGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006608XLOC_006608Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011765-exon-sc0000132-1575043694:235003..235072TCONS_00011765-exon-sc0000132-1575043694:235003..235072Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1575043694:234213..234317TCONS_00011765-exon-sc0000132-1575043694:234213..234317Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1575043694:228885..229058TCONS_00011765-exon-sc0000132-1575043694:228885..229058Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1575043694:225514..225588TCONS_00011765-exon-sc0000132-1575043694:225514..225588Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1575043694:224136..224216TCONS_00011765-exon-sc0000132-1575043694:224136..224216Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1575043694:221453..223957TCONS_00011765-exon-sc0000132-1575043694:221453..223957Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1510915933:235003..235072TCONS_00011765-exon-sc0000132-1510915933:235003..235072Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1510915933:234213..234317TCONS_00011765-exon-sc0000132-1510915933:234213..234317Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1510915933:228885..229058TCONS_00011765-exon-sc0000132-1510915933:228885..229058Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1510915933:225514..225588TCONS_00011765-exon-sc0000132-1510915933:225514..225588Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1510915933:224136..224216TCONS_00011765-exon-sc0000132-1510915933:224136..224216Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1510915933:221453..223957TCONS_00011765-exon-sc0000132-1510915933:221453..223957Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1491911889:235003..235072TCONS_00011765-exon-sc0000132-1491911889:235003..235072Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1491911889:234213..234317TCONS_00011765-exon-sc0000132-1491911889:234213..234317Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1491911889:228885..229058TCONS_00011765-exon-sc0000132-1491911889:228885..229058Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1491911889:225514..225588TCONS_00011765-exon-sc0000132-1491911889:225514..225588Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1491911889:224136..224216TCONS_00011765-exon-sc0000132-1491911889:224136..224216Clytia hemisphaericaexon
TCONS_00011765-exon-sc0000132-1491911889:221453..223957TCONS_00011765-exon-sc0000132-1491911889:221453..223957Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000132supercontigsc0000132:221453..235072 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.000236106	0.00692688	1.44712	0.957322	0	0.000113675	0.622204	0	2.17162	2.8647	4.53073	4.48599	0.000240214	2.07618	1.23762	2.75976	0	0	0.00302912	0	2.4829	3.43542	9.5976	8.95909
Blast
[Close]
BLAST of TCONS_00011765 vs. Swiss-Prot (Human)
Match: TRAF3 (TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 7.906e-39
Identity = 118/468 (25.21%), Postives = 213/468 (45.51%), Query Frame = 2 
Query:   68 KIFTDTAFQKQIEDVKIICCYSSHGCSWEGTIQSLTEH-REDCEFVNVICEK-GCGSTLLKYQLESHICLDPSTPSLQQELALCNSAF-MENGEFVDDHDCTMESRPGPEGESSRTMPTSSEEPASPSISGDGASLKFCKFIKLGCKFKGNRFEVDLHMDIASETHLDLVCKSINEIKTEYIKKENKVIAKHDNKIKLVQDYICKQNVVIKDLHETNRTLETNSRNMQNQIKDLASKTEMF----------MEEITRLKVQANQLQEEMNE-----------SRDT----------------------------------NFTGSLLWKIKNFSKHMQNAVNKTELSVYSPPFFTSRYGYKVRAQLFVNGLGSQTGEYMAIYFHILPSEHDDILRWPFNHKITFSLLEQTPDQTNVTYTLVPTPNEDSYKRPSDKMSDGKGFNRFISLDALKKGKYIKNDSIFVKIRV 1297
            K+F D   +++I  ++I C   S GC+ +  +  L  H + DC F  + C +  C   +L+  L  H+  + +    +   + C S   M   +  +D DC       P   S +T+   SE  A  S   +  S   C F + GC F+G   ++  H   ++  H++L+ +  N ++ +    +N+ + K +  I+ + + IC   + I+   E  R  E+   ++Q  I   A K +             EE   +K     LQ  + E           +R+T                                  ++ G L+WKI+++ +  Q AV    LS+YS PF+T  +GYK+ A++++NG G   G +++++F I+  E+D +L WPF  K+T  L++Q   + ++     P PN  S+K+P+ +M+   G   F++   L+ G YIK+D+IF+K+ V
Sbjct:   99 KVFKDNCCKREILALQIYCRNESRGCAEQLMLGHLLVHLKNDCHFEELPCVRPDCKEKVLRKDLRDHV--EKACKYREATCSHCKSQVPMIALQKHEDTDCPCVVVSCPHKCSVQTL-LRSELSAHLSECVNAPST--CSFKRYGCVFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEK-NKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIV 560
The following BLAST results are available for this feature:
BLAST of TCONS_00011765 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF37.906e-3925.21TNF receptor-associated factor 3 OS=Homo sapiens G... [more]
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