|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011724 ID=TCONS_00011724|Name=TCONS_00011724|organism=Clytia hemisphaerica|type=transcript|length=670bp
ATattataaataataaaattcaaattgacCTATATACCCTCGAGGAAACG
GAAATAATTGAAATTAGTAGAGATAACATAACAGACAGACAGTAAAAGCA
AAAAGCATAATTTTTGTAATAAACATGTTTCTGTTCAAGAAGATCTCGAA
GAAGGAAAAGCAAGAGGAAACTGAATTATACGTCGAACTTGCAGACACTA
TTCCTGTGGAAATATTTCATAATCTTCGGTTTCATTCAAACAGACCAAAG
AAATCAGACTTTGCAGTAGAGGTTGGTTTGCGAAATTCACTTTGCAATGT
TGTGGTAAAAGAGAAGAGAAATGAGAACATTGTAGGAATGGCTAGATTGG
TAGGTGATGGAGGAATATTCTGCGCCATTGTTGGTGTCCGAGTTTTACCT
GTTTacgaaaagaacaaaaaagtaGAGACGATGTTGATGAAGAAAATGAT
GGAATATATCGAACATAACATTCCAAAAACGTGTTTTATTACAGTAGTGG
TATCCAAAAAGAAGtccgttttttataaaaaatttggttttatGGAGAAT
AGTACATTGAACAGAATTGGGATGTTCTATAATAAATGAAAATGGAACGT
TTATATTCCTCTAAAAATTTTGTGGTTTTGTATCTATTTACAAGTATTTA
CAGTTACTAATATGTTACAC Run BLAST on NCBI protein sequence of TCONS_00011724-protein >TCONS_00011724-protein ID=TCONS_00011724-protein|Name=TCONS_00011724-protein|organism=Clytia hemisphaerica|type=polypeptide|length=154bp
MFLFKKISKKEKQEETELYVELADTIPVEIFHNLRFHSNRPKKSDFAVEV
GLRNSLCNVVVKEKRNENIVGMARLVGDGGIFCAIVGVRVLPVYEKNKKV
ETMLMKKMMEYIEHNIPKTCFITVVVSKKKSVFYKKFGFMENSTLNRIGM
FYNK Run BLAST on NCBI transcript from alignment at sc0000132:163733..165049+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011724 ID=TCONS_00011724|Name=TCONS_00011724|organism=Clytia hemisphaerica|type=transcript|length=1317bp|location=Sequence derived from alignment at sc0000132:163733..165049+ (Clytia hemisphaerica)
ATattataaataataaaattcaaattgacCTATATACCCTCGAGGAAACG
GAAATAATTGAAATTAGTAGAGATAACATAACAGACAGACAGTAAAAGCA
AAAAGCATAATTTTTGTAATAAACATGTTTCTGTTCAAGAAGATCTCGAA
GAAGGAAAAGCAAGAGGAAACTGAATTATACGTCGAACTTGCAGACACTA
TTCCTGTGGAAATATTTCATAATCTTCGGTTTCATTCAAACAGACCAAAG
AAATCAGACTTTGCAGTAGAGGTTGGTTTGCGAAATTCACTTTGCAATGT
TGTGGTAAAAGAGAAGAGAAATGAGAACATTGTAGGAATGGCTAGATTGG
TAGGTGATGGAGGAATATTCTGCGCCATTGTCGGTGTCCGAGTTTTACCT
GTTTacgaaaagaacaaaaaagtaGAGACGATGTTGATGAAGAAAATGAT
GGAATATATCGAACATAACATTCCAAAAACGTGTTTTATTACAGTAGTGG
TATCCAAAAAGAAGtccgttttttataaaaaatttggttttatGGAGAAT
AGTACATTGAACAGAATTGGGATGTTCTATAATAAATGAAAATGGAACGT
TTATATTCCTCTAAAAATTTTGTGGTTTTGTATCTATTTACAAGTATTTA
CAGTTACTAATATGTTACACTAGCCTTGTGCCACGCTTttagaataaaaa
gaaaactaaaaacacAACCAGAATACGAGGCAACCCTATATATAACTAGA
GCCTTAACAAGATACACTGCACTTGCACTTATTCGGCCAATGTCTTTTCC
TGGGTGGACAGGGttatttcattgtttgataATTAATAAAAAAGTTCAAC
GAATGAATGCATTAAAACAGCCGTTCTGGTAGGAAAAACTAAAGACACAT
AAATAAGAAAGTGTTAatgctaaaaacaaaaagaagaaaaactaaTTCAG
GAAGATCGTTGATGAGATATTTCGAGCATAAGATCGTCGNCGATTGGTAG
GTGATGGAGGAATATTCTGCGCCATTGTTGGTGTCCGAGTTTTACCTGTT
TacgaaaagaacaaaaaagtaGAGACGATGTTGATGAAGAAAATGATGGA
ATATATCGAACATAACATTCCAAAAACGTGTTTTATTACAGTAGTGGTAT
CCAAAAAGAAGtccgttttttataaaaaatttggttttatGGAGAATAGT
ACATTGAACAGAATTGGGATGTTCTATAATAAATGAAAATGGAACGTTTA
TATTCCTCTAAAAATTTTGTGGTTTTGTATCTATTTACAAGTATTTACAG
TTACTAATATGTTACAC Coding sequence (CDS) from alignment at sc0000132:163733..165049+ >TCONS_00011724 ID=TCONS_00011724|Name=TCONS_00011724|organism=Clytia hemisphaerica|type=CDS|length=930bp|location=Sequence derived from alignment at sc0000132:163733..165049+ (Clytia hemisphaerica)
ATGTTTCTGTTCAAGAAGATCTCGAAGAAGGAAAAGCAAGAGGAAACTGA
ATTATACGTCGAACTTGCAGACACTATTCCTGTGGAAATATTTCATAATC
TTCGGTTTCATTCAAACAGACCAAAGAAATCAGACTTTGCAGTAGAGGTT
GGTTTGCGAAATTCACTTTGCAATGTTGTGGTAAAAGAGAAGAGAAATGA
GAACATTGTAGGAATGGCTAGATTGGTAGGTGATGGAGGAATATTCTGCG
CCATTGTTGGTGTCCGAGTTTTACCTGTTTacgaaaagaacaaaaaagta
GAGACGATGTTGATGAAGAAAATGATGGAATATATCGAACATAACATTCC
AAAAACGTGTTTTATTACAGTAGTGGTATCCAAAAAGAAGtccgtttttt
ataaaaaatttggttttatGGAGAATAGTACATTGAACAGAATTGGGATG
TTCTATAATAAATGAATGTTTCTGTTCAAGAAGATCTCGAAGAAGGAAAA
GCAAGAGGAAACTGAATTATACGTCGAACTTGCAGACACTATTCCTGTGG
AAATATTTCATAATCTTCGGTTTCATTCAAACAGACCAAAGAAATCAGAC
TTTGCAGTAGAGGTTGGTTTGCGAAATTCACTTTGCAATGTTGTGGTAAA
AGAGAAGAGAAATGAGAACATTGTAGGAATGGCTAGATTGGTAGGTGATG
GAGGAATATTCTGCGCCATTGTTGGTGTCCGAGTTTTACCTGTTTacgaa
aagaacaaaaaagtaGAGACGATGTTGATGAAGAAAATGATGGAATATAT
CGAACATAACATTCCAAAAACGTGTTTTATTACAGTAGTGGTATCCAAAA
AGAAGtccgttttttataaaaaatttggttttatGGAGAATAGTACATTG
AACAGAATTGGGATGTTCTATAATAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011724-exon-sc0000132-1491911889:163733..164085 | TCONS_00011724-exon-sc0000132-1491911889:163733..164085 | Clytia hemisphaerica | exon |
| TCONS_00011724-exon-sc0000132-1510915933:163733..164085 | TCONS_00011724-exon-sc0000132-1510915933:163733..164085 | Clytia hemisphaerica | exon |
| TCONS_00011724-exon-sc0000132-1575043694:163733..164085 | TCONS_00011724-exon-sc0000132-1575043694:163733..164085 | Clytia hemisphaerica | exon |
| TCONS_00011724-exon-sc0000132-1491911889:164733..165049 | TCONS_00011724-exon-sc0000132-1491911889:164733..165049 | Clytia hemisphaerica | exon |
| TCONS_00011724-exon-sc0000132-1510915933:164733..165049 | TCONS_00011724-exon-sc0000132-1510915933:164733..165049 | Clytia hemisphaerica | exon |
| TCONS_00011724-exon-sc0000132-1575043694:164733..165049 | TCONS_00011724-exon-sc0000132-1575043694:164733..165049 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000132 | supercontig | sc0000132:163733..165049 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008080 | N-acetyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008080 |
N-acetyltransferase activity |
Blast
The following BLAST results are available for this feature:
|
