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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011721 ID=TCONS_00011721|Name=TCONS_00011721|organism=Clytia hemisphaerica|type=transcript|length=520bp
TTTTGCCATACAAGTTTTGAAACCAACCGCTGAAAACAGataCCAATGTA
GCGATTGTGaatggttttcaaaaatcacTCAATCAGTGGTTCCTGGTGGA
TTCGCCATGATTGGTTTCTTAGCAATGGTTCTTCTTTTCCCTTCGGAGTA
CACTTGTTTGAGGAAAATATCGAATGATTTGAAACCATCCGTCAGTCGCT
CAAACATCATATCCAATCCATCAAACGAATACGAAAAGCAATCACAAGAA
TATCAGACAAAGAACCCGTCTGACATGGACATTTACTATTCAACAGAAAC
AGAAGATCGCATCAATAATCATTTCGACGAAACCGTAAAGAATGTATCCT
TGGGAATGCAGCAAACGAGCCTTGATATTCCGCCAACCGAAAAGaatcaa
aaatttgataattgctgaaacactttttttagtttttaagttGATGTGTA
CATATGAACCAATAATATTCTGTAAATAAAGTTACCGTTTTTATAGTTAA
AAATCtactagaaaaagaaa Run BLAST on NCBI transcript from alignment at sc0000132:45641..46691+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011721 ID=TCONS_00011721|Name=TCONS_00011721|organism=Clytia hemisphaerica|type=transcript|length=1051bp|location=Sequence derived from alignment at sc0000132:45641..46691+ (Clytia hemisphaerica)
TTTTGCCATACAAGTTTTGAAACCAACCGCTGAAAACAGGTCAGTTTTTT
ATCTTActtttttaacttaaaaaataaaacgaggctaaaaatagacctta
tcggagttttttatttttctaaaaaagcaatgcattgtgggattgtttcg
agtgtattacaatagaattcccNAGATGACAATCATTAGTTTCTGTTTGC
ATTTTCAGCTCTCTTATTTATACAaactcaatttttgattttaaagataC
CAATGTAGCGATTGTGaatggttttcaaaaatcacTCAATCAGTGGTTCC
TGGTGGATTCGCCATGATTGGTTTCTTAGCAATGGTTCTTCTTTTCCCTT
CGGAGTACACTTGTTTGAGGAAAAGTAAGTTATTTTCAGTTCGAGGATAT
TCATTTTCCTGAATCAATTTCATTCTTTTCAAAAAGAGAAATCGTTTTAG
TTTCTGGTTGGAAGCTTTAAACGAGGAAAAGATCGCGTCACTTTGGTAAC
TTCCTTACAAAAATATGTCCTTATTAGACCGTCATCCGATATATTGTCAG
AAATGGTAACGAGATCTGACTTCACGCAAAATTAACAAAGCTACCGCAAG
TACAAACATGTCGAATGACACACCTATTAAATCTTCCTGctaaaacaaag
caaaacagacaataaattatattcaaatttactTCTCTATCCTTTCAGTA
TCGAATGATTTGAAACCATCCGTCAGTCGCTCAAACATCATATCCAATCC
ATCAAACGAATACGAAAAGCAATCACAAGAATATCAGACAAAGAACCCGT
CTGACATGGACATTTACTATTCAACAGAAACAGAAGATCGCATCAATAAT
CATTTCGACGAAACCGTAAAGAATGTATCCTTGGGAATGCAGCAAACGAG
CCTTGATATTCCGCCAACCGAAAAGaatcaaaaatttgataattgctgaa
acactttttttagtttttaagttGATGTGTACATATGAACCAATAATATT
CTGTAAATAAAGTTACCGTTTTTATAGTTAAAAATCtactagaaaaagaa
a
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011721-exon-sc0000132-1491911889:45641..45679 | TCONS_00011721-exon-sc0000132-1491911889:45641..45679 | Clytia hemisphaerica | exon |
| TCONS_00011721-exon-sc0000132-1510915933:45641..45679 | TCONS_00011721-exon-sc0000132-1510915933:45641..45679 | Clytia hemisphaerica | exon |
| TCONS_00011721-exon-sc0000132-1575043694:45641..45679 | TCONS_00011721-exon-sc0000132-1575043694:45641..45679 | Clytia hemisphaerica | exon |
| TCONS_00011721-exon-sc0000132-1491911889:45887..46014 | TCONS_00011721-exon-sc0000132-1491911889:45887..46014 | Clytia hemisphaerica | exon |
| TCONS_00011721-exon-sc0000132-1510915933:45887..46014 | TCONS_00011721-exon-sc0000132-1510915933:45887..46014 | Clytia hemisphaerica | exon |
| TCONS_00011721-exon-sc0000132-1575043694:45887..46014 | TCONS_00011721-exon-sc0000132-1575043694:45887..46014 | Clytia hemisphaerica | exon |
| TCONS_00011721-exon-sc0000132-1491911889:46339..46691 | TCONS_00011721-exon-sc0000132-1491911889:46339..46691 | Clytia hemisphaerica | exon |
| TCONS_00011721-exon-sc0000132-1510915933:46339..46691 | TCONS_00011721-exon-sc0000132-1510915933:46339..46691 | Clytia hemisphaerica | exon |
| TCONS_00011721-exon-sc0000132-1575043694:46339..46691 | TCONS_00011721-exon-sc0000132-1575043694:46339..46691 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000132 | supercontig | sc0000132:45641..46691 + |
Blast
The following BLAST results are available for this feature:
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