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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011674 ID=TCONS_00011674|Name=TCONS_00011674|organism=Clytia hemisphaerica|type=transcript|length=1738bp
GGTAAATCGTGGATACAAATTGTGTCTCAAACAGACTCTTTATCGATGAT
ATAAGTGAAGACGAGATGGATTGAGTTTCAAACAGACTATCTGATGATGC
TGCTAGTGTAGAGATTGATTGAGTTTCAAACAGACTCTCTGATGATGCTG
CTAGTGTGGAGATGGGTTGAGTTTCAAATAGACTATCTGATGATGCTGCT
AGTGTGGAGATGGGTTGAGTTTCAAATAGACTTTCTGTTGAAATCTCCGG
TGATGAGGTAAGGAAACTGCTGTAAGATAGGGAGGATGAAACAGATGATT
CTTGGCCGACCGCAAAAGATGATGACGATTGAAATATACTCTGAGTCAAT
GGTGATACAGATTCAAAAAGACTTTCAATCAGTGAAATTGATGACTGAGA
ATCTAGAATGGATGTTGAAAAGGATTCAAAGATATTCTCGCTTGATGACA
TTGATGCAGAAGATGATTCCATGATGCTGGTGAACGATTGGAGATTATCG
CTCATCGAGaaggattcgaatgttttggacATCAATGATGATGATTGGTG
CATTTGAGATGATGCTGGTGACGAAGAGAAGCTTTCAGTTTGTTCTGGTA
AAGAACTTGACGGTGATGAAAACATCTCTGGCGAGGATGATGAGAACATT
TCTGATGCTTCTGGTAagattgaagatgaagatgaaattaTTTCAGATTC
TCCCGGTAGAGCTGTTGAATAAGAATCTACCATTGATGAGAAGCTTTCTA
GTTGCTGGTAGCTCGAGCTGACTGATGACATTGGTGGTTCAAGAAGGGTC
GAAACACTGCTGGAGACGAAAACTGATGACGACTCTTGTTGATGGTCGAT
GGATGTAAAGAATAGAGATTCTGATTGTTCTATGGACATTGTTGAGCTTG
TGATTGATTGCATTTTAGACAGATTTGGTGTTTCAATATCAAGATTACTC
GACGCCTGGCTGACAGAGGATGTTATGCTTGACGACTTTTCAAGTACACT
AATGCTTGCTATCATACCTATGGATTGACTTGGGGATGCCAGCAGTGAAG
ATACTGACATTTCATTGTCCACACTACTGCTTGTGCTTGGTGTTGAAGCC
AGATTAACAATCGAATTGTCAACATAAGTACTTGTCGAAGCCTCTACAGA
ATTCTCAATAGAAGTTTGTATAGCACTGTTAAGTCCTTGTGTTGGTGAAA
CATTACCAGTCTGTGTGGGAGTTGTTGACTCCTTGATATCTGAGATGCNA
ATTTTCAAGTGCACTAATGCTTGCTATCATACCTATGGATTGACTTGGGG
ATGCCAGCAGTGAAGATACTGACATTTCATTGTCCACACTACTGCTTGCC
AAAGCTGGTGTTGAAGCCAGATTAACAATGGAACTGTCAACATAGTTACT
TGTCGAAGCCTCTACAGAATTCTCAATAGAAGTTTGTATAGCACTGTGAA
GTCCTTGTGTTGGTGAAACATTACCAGTCTGTGTGGGAGTTATTGACTCC
TTGATATCTGAGATGCTCACACTTGACGACCCCTCGTCCTGGGATACTGA
AGTTTGTTGGACAACTAATGATAATGAACCATAACTTGAAGACTTGGCAA
GAAAAGAGCTTTGAACTTGAACAAATTCGCTTGGGGAGACAGTCGCTACG
TAAGATGACGGTTGAAATTCTTGCAGAGCTTCAGATTGATCTTCTGTTTC
TTCATTTTCGTTTGGTTCTTCCCCACCTTCACATTTTG Run BLAST on NCBI transcript from alignment at sc0000131:267026..268818- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011674 ID=TCONS_00011674|Name=TCONS_00011674|organism=Clytia hemisphaerica|type=transcript|length=1793bp|location=Sequence derived from alignment at sc0000131:267026..268818- (Clytia hemisphaerica)
GGTAAATCGTGGATACAAATTGTGTCTCAAACAGACTCTTTATCGATGAT
ATAAGTGAAGACGAGATGGATTGAGTTTCAAACAGACTATCTGATGATGC
TGCTAGTGTAGAGATTGATTGAGTTTCAAACAGACTCTCTGATGATGCTG
CTAGTGTGGAGATGGGTTGAGTTTCAAATAGACTATCTGATGATGCTGCT
AGTGTGGAGATGGGTTGAGTTTCAAATAGACTTTCTGTTGAAATCTCCGG
TGATGAGGTAAGGAAACTGCTGTAAGATAGGGAGGATGAAACAGATGATT
CTTGGCCGACCGCAAAAGATGATGACGATTGAAATATACTCTGAGTCAAT
GGTGATACAGATTCAAAAAGACTTTCAATCAGTGAAATTGATGACTGAGA
ATCTAGAATGGATGTTGAAAAGGATTCAAAGATATTCTCGCTTGATGACA
TTGATGCAGATGATGATTCCATGANAGGATTCAAAGATATTCTCGCTTGG
TGACATTGATGCAGAAGATGATTCCATGATGCTGGTGAACGATTGGAGAT
TATCGCTCATCGAGAAGGATTCGAATGTTTTGGACATCAATGATGATGAT
TGGTGCATTTGAGATGATGCTGGTGACGAAGAGAAGCTTTCAGTTTGTTC
TGGTAAAGAACTTGACGGTGATGAAAACATCTCTGGCGAGGATGATGAGA
ACATTTCTGATGCTTCTGGTAAGATTGAAGATGAAGATGAAATTATTTCA
GATTCTCCCGGTAGAGCTGTTGAATAAGAATCTACCATTGATGAGAAGCT
TTCTAGTTGCTGGTAGCTCGAGCTGACTGATGACATTGGTGGTTCAAGAA
GGGTCGAAACACTGCTGGAGACGAAAACTGATGACGACTCTTGTTGATGG
TCGATGGATGTAAAGAATAGAGATTCTGATTGTTCTATGGACATTGTTGA
GCTTGTGATTGATTGCATTTTAGACAGATTTGGTGTTTCAATATCAAGAT
TACTCGACGCCTGGCTGACAGAGGATGTTATGCTTGACGACTTTTCAAGT
ACACTAATGCTTGCTATCATACCTATGGATTGACTTGGGGATGCCAGCAG
TGAAGATACTGACATTTCATTGTCCACACTACTGCTTGTGCTTGGTGTTG
AAGCCAGATTAACAATCGAATTGTCAACATAAGTACTTGTCGAAGCCTCT
ACAGAATTCTCAATAGAAGTTTGTATAGCACTGTTAAGTCCTTGTGTTGG
TGAAACATTACCAGTCTGTGTGGGAGTTGTTGACTCCTTGATATCTGAGA
TGCNAATTTTCAAGTGCACTAATGCTTGCTATCATACCTATGGATTGACT
TGGGGATGCCAGCAGTGAAGATACTGACATTTCATTGTCCACACTACTGC
TTGCCAAAGCTGGTGTTGAAGCCAGATTAACAATGGAACTGTCAACATAG
TTACTTGTCGAAGCCTCTACAGAATTCTCAATAGAAGTTTGTATAGCACT
GTGAAGTCCTTGTGTTGGTGAAACATTACCAGTCTGTGTGGGAGTTATTG
ACTCCTTGATATCTGAGATGCTCACACTTGACGACCCCTCGTCCTGGGAT
ACTGAAGTTTGTTGGACAACTAATGATAATGAACCATAACTTGAAGACTT
GGCAAGAAAAGAGCTTTGAACTTGAACAAATTCGCTTGGGGAGACAGTCG
CTACGTAAGATGACGGTTGAAATTCTTGCAGAGCTTCAGATTGATCTTCT
GTTTCTTCATTTTCGTTTGGTTCTTCCCCACCTTCACATTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011674-exon-sc0000131-1575043694:268370..268818 | TCONS_00011674-exon-sc0000131-1575043694:268370..268818 | Clytia hemisphaerica | exon |
| TCONS_00011674-exon-sc0000131-1575043694:267026..268314 | TCONS_00011674-exon-sc0000131-1575043694:267026..268314 | Clytia hemisphaerica | exon |
| TCONS_00011674-exon-sc0000131-1510915933:268370..268818 | TCONS_00011674-exon-sc0000131-1510915933:268370..268818 | Clytia hemisphaerica | exon |
| TCONS_00011674-exon-sc0000131-1510915933:267026..268314 | TCONS_00011674-exon-sc0000131-1510915933:267026..268314 | Clytia hemisphaerica | exon |
| TCONS_00011674-exon-sc0000131-1491911889:268370..268818 | TCONS_00011674-exon-sc0000131-1491911889:268370..268818 | Clytia hemisphaerica | exon |
| TCONS_00011674-exon-sc0000131-1491911889:267026..268314 | TCONS_00011674-exon-sc0000131-1491911889:267026..268314 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131 | supercontig | sc0000131:267026..268818 - |
Blast
The following BLAST results are available for this feature:
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