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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011663 ID=TCONS_00011663|Name=TCONS_00011663|organism=Clytia hemisphaerica|type=transcript|length=1893bp
CACCTTTCCTGATTGGCTCGCAAACGAAAAGCAtttcttttcacaaaaaa
aacttgATAATAATTAGACatagagtttttttaagaaaaaagatGTTTTA
CAACCGTGCAATTATAATAATTTTCTGCTAGTCGACATTAGTCCTCgaca
caaatattttttttgattggaaaaattttaaGCCGTGTTTTTGACGTGTT
ATTGGTGAGAGCTTATATATCGCAGGACATTGACTTCCTTGGAACTTAAA
TAAACGCAAATGAAAGATATGAGAATTTAATGACGCGAATTTTGGTACCC
TTATGAGCgacatattactgtattacattCACTTCTACAAAGAGTCTTCG
GAACCAGCGTATGCTATGGTGTATAGTACAACGtcaattttaaggatttt
attgattttaacaTATTTGAGTTCTACCATGGCATGGATAGGGCTTGTTC
GTACTTTTCCAATAGCGGAGAAGCCAAATAAACGTGTTCCAAATGCTACT
GCTATAGACTCTAAATTCAAACAGAAATCTGGATGTCGTAAAGATAAACA
TTGCCAGCCAAGCGAGTATTGTAATCGTTACGAAAAGACTTGTTTAAATT
GTCGTAAAGAAGGCGAAACGTGTCGTCGCAACAAAATGTGTTGTCGTGGG
ATGGAATGCGCCGGAGGTGTTTGCCGTCGTAAAATAAGACTGGGAACTGA
AGGTGCTTTATGTACAAAAGACAGAGAATGTAATTATGGATTTTGTTGTG
CTCGTGAAAAAGGACAGAACGTTTGTAAACGAATGTTACAAGAAGGGGAT
AGATGTAGTAAACCAAATCGTTTGTATTTATGGTCTCATCAGTGTCCTTG
TGCTTATGGCATGAAATGTAGAAGAAGGAAGAGGACAAACAAATTGTTAG
ATTTGATCAAAGATTGGAATGACGAAAGTGAGAGACGATGCGTTCGAACT
AATTATAATACTTGAAAAAATGTTCAAGTAGTTTAGTCAATAAGTTGGTG
TTAAAGAAAAGGAGATTTATAGATCGGAAAGAACTGAACCTCACAATGAA
TCAACGGGTGAAAGCGTCACCGTTCGTTGCATCCTAAAAGGCTGGACCTT
CACTTTACCAACAATACAAACGTACGAAGCCAAAATATTGCGCAATACCG
TTCAACGCTGTTTTATTTATTGTCAACCACGCCTTATCAGTACTTTGCCT
CTGTATGACGCCAGTTAGGAAGCATGCACTAGCATCTTGGTATATTATAC
GTCAAGAATTTATGGTACAGGATGCACTCAAAGATCCCATTTCCAAGATT
GTTTTTGGGTGGATCTATGGAAAAATGCATTGTATTGTAAACATTGAAAT
CTATTTAACGATCATGGTGTTGTTTTTTTGAGATACTCAGATATCTACAC
GTGAACACTTTTAGACAATGGAATGGTTTCATTGTTGTTAGTTATCATgt
ttttaaacaatactatgatgacgtcacacattcgtGGACCAATAGATTTG
CAGCATTACTACTCACTTGATCAATAAACATTACCTGCTTTCGATTCAAC
GACCATCTAAGGTGTGTCATTAATATCGATGTATGAAATATGAATTTGCT
GCGACAGGAAATATGTATATCCCTTATGGGGGTCTTTTTTCCCTTTTAAG
AGAACTTTCCGTTTGTTAAATTATTGTAACTTTACCAAAGGGGAGTACGA
AGCCCCTTTTGAATCACGAAACCCTCACTTAATGGgtattgatttttttg
cttttatgaAAACGAGAATACTTTGTAAATACGTCAGATCTGTACATATT
TTGGAATCAAATTAAAGaattttatatttattgtttTACTACAATTCTTT
TCTCATTGTTTTTTTGACCACATCGAAAGTAGCTAACTTCCTA Run BLAST on NCBI protein sequence of Dickkopf protein >TCONS_00011663-protein ID=TCONS_00011663-protein|Name=Dickkopf protein|organism=Clytia hemisphaerica|type=polypeptide|length=220bp
MSDILLYYIHFYKESSEPAYAMVYSTTSILRILLILTYLSSTMAWIGLVR
TFPIAEKPNKRVPNATAIDSKFKQKSGCRKDKHCQPSEYCNRYEKTCLNC
RKEGETCRRNKMCCRGMECAGGVCRRKIRLGTEGALCTKDRECNYGFCCA
REKGQNVCKRMLQEGDRCSKPNRLYLWSHQCPCAYGMKCRRRKRTNKLLD
LIKDWNDESERRCVRTNYNT Run BLAST on NCBI transcript from alignment at sc0000131:459833..464382+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011663 ID=TCONS_00011663|Name=TCONS_00011663|organism=Clytia hemisphaerica|type=transcript|length=4550bp|location=Sequence derived from alignment at sc0000131:459833..464382+ (Clytia hemisphaerica)
CACCTTTCCTGATTGGCTCGCAAACGAAAAGCAtttcttttcacaaaaaa
aacttgATAATAATTAGACatagagtttttttaagaaaaaagatGTTTTA
CAACCGTGCAATTATAATAATTTTCTGCTAGTCGACATTAGTCCTCgaca
caaatattttttttgattggaaaaattttaaGCCGTGTTTTTGACGTGTT
ATTGGTGAGAGCTTATATATCGCAGGACATTGACTTCCTTGGAACTTAAA
TAAACGCAAATGAAAGATATGAGAATTTAATGACGCGAATTTTGGTACCC
TTATGAGCgacatattactgtattacattCACTTCTACAAAGAGTCTTCG
GAACCAGCGTATGCTATGGTGTATAGTACAACGtcaattttaaggatttt
attgattttaacaTATTTGAGTTCTACCATGGCATGGATAGGGCTTGTTC
GTACTTTTCCAATAGCGGAGAAGCCAAATAAACGTGTTCCAAATGCTACT
GCTATAGACTCTAAATTCAAACAGGTGAGGCTTGTTGTAATGGAATATCC
CAGCTAGctcacaacgttgtttcaacgttaacgttatatggacgttagat
agacgttgtttcgacgttttgTACCAGCTGGGATGACACATTCGAAGTTT
GAATTCATATCTTGAATGATGGACGAATATTTTGTTTACAAGACTAGCGC
TGAACACAATCAGATACCAGTCTTTGTCAATTAATTAgacttttactttt
tataatttgaaaataattactcGAGTGTAATTAGCTGTCAGGTAAATATC
AAACAATTTGTTATGATTTTCCCTTTGTTCTGTTTTAGAAATCTGGATGT
CGTAAAGATAAACATTGCCAGCCAAGCGAGTATTGTAATCGTTACGAAAA
GACTTGTTTAAATTGTCGTAAAGAAGGCGAAACGTGTCGTCGCAACAAAA
TGTGTTGTCGTGGGATGGAATGCGCCGGAGGTGTTTGCCGTCGTAAAATA
AGACTGGGAACTGAAGGTGCTTTATGTACAAAAGACAGAGAATGTAATTA
TGGATTTTGTTGTGCTCGTGAAAAAGGACAGAACGTTTGTAAACGAATGT
TACAAGAAGGGGATAGATGTAGTAAACCAAATCGTTTGTATTTATGGTCT
CATCAGTGTCCTTGTGCTTATGGCATGAAATGTAGAAGAAGGAAGAGGAC
AAACAAGTAagtattcttctttttttaattattttgcaTATTATATCTTA
ACGTAGTTTGAGTAGATCGCGCATGCTAGCTTGGATGTGTTTTTACTTAG
ATGTCGAAAGTGCTTTGTACATTTTTCACCAGCACTTGTGCCAAAAGCTG
GGATACAGTCCCAAGTAGTTACGCGGCTAAAGATTCGTGGATACATTTAT
GaattacaaattacaaattGTTTATTACAAATTAAGTACTTATTATTACA
AACCAGCCTATTTTTCAAACTTGCTTCATGTTTAAGGTATTCTTGGTAAT
gatggcctttttcaaaaatgaacttttaaaagaaatttcgaTACACATTT
TGGATACATGTTAAAACTGAGTGATTTGCGGTTAGTGATTTCTTCCTGTC
GAAAGGCGGAAAGAAAGTTGAGAAGGCGTAGAAAAGAGGAGGAGAAGTTC
AAACTTAATAACAACTCAATTGAAATCAAATTACATGACATTTGAACTGA
AAACCACATGATATTGTTACTATTTCTCTCAAAATACTTTTATCTTATTT
CTTGGTAATTATGCAAGAGTTAAATCAAAGTCTACCCACTTAGAGTTCAA
TCTTTAGGGGTGTGAGAAAATCGATTTGTAGGAGTTTTTGTTTATATGTC
TCGAACTTTTGAATTCAATATCTCAAACATAGGTTTGTCAAAACATATAA
TTTCTGAAGAAAAGGGGGAGGTAGGGGCGTCAGTTTGTTATGTACAATTT
CTTTAACAGCAATATAAAAAGTGTTAGAAAATTATTAGATGTCTCTTTAC
AAAATTAGACTTTTTGAACACGTCACCTCCTCCTTTCCAACTCCTCCTAT
CTTTCAATGGAATGATGTTTGGAGAGGCGTTTAACACCTCATCTGTATAT
CGTTTCATCAAAAGAACACGAACCATCAACGTCCAGACATTTTGTTCACA
AATGTTTTAAAGTTTGAATTCGCACCTCATTATTTCGCGTTCTTCAAAAA
TTCACGGGTGGTCAAATATTGAAAACCTTCGAATAACGTAAACTTTATAA
CAACCATCATGATTGACATCATGATATGTCGAACCCTTAAGTCGCTAAAG
CTTAAACTTTCCTGAGAGAAATCTTTAGTGAATATTCATTTAAGTATAAT
ATAAGGATACCAGttgtgaaaatgttttcaaaaccaGGATTATTTTTGga
actattttgaaaataaagtttttaaatatAGCTATAAATGAATGAACGGA
AAAAATAAGTGGTATGgctttaaaaaatacaataagatttaaaagttaaa
gaaaagcAATCATGCAAAGACGCACTTTAATCACATTAAACAAAAGAATA
GCATGTTAATTGATTGCCTATTTGTCTATCTTTATTACTCTTTTCCTTGT
TTTCTTTATCTATGCTTCTTGTTTCATACGGTATGCTATAAAATGTCAAG
GCAACAGGAACGGCCAAAATTGTGAGAGGGCGGGGTACGAAGGAAGTTAG
GGTtgtctttaaatttcattacaACCGTTCATCTACCCCTCCTCTAAATA
CCGGTACAAATCTCTTTGTCTCTGTTAGCTATTTTTCCTCTCCTCCTTTC
CACATCCTTCGCATACATACTTATGAAAACTTGAATAATAGAGTCAAGCT
TTAAGGATTTACTTTCAACGAATATCCAACATCTATTTTCGTaatgtttt
ttgaattaaaaactAATGCGAAAACTTTACGATAAATTTATGATCGAACT
AAATTACAAAGAGTGGGTACCCAGTTGGCGTGAGTTTATAAAGATTCCCG
TTTAATTATATCGGCAGTATATTTTGCTGGGACTTCTCATTCAAATGGTC
ACTACCGAATTCACGCCAACTGGGTAGATCACTCTAAACAtgctattttt
ttataagaatatccaaattttttgaactCTTCTGATCTGATGCTCTTTAA
CAATTTGAATGATAAACTTAAAGATGTTAAATATTTTTGCGCCATTTCCT
AAGAAAATGGCTGTTTAAGAGTCCAAAAAGactcaaaatattcttataat
ggctataatatagtttgttcttattaaagctttttttgtgTTCTGTGCGT
GTTTGCTGAAATGGTTCCTTCCTTTTCTGGGTTTAAATCATTTTAAATTT
GGACAGTgctatttttaaaagtttgagaTAATGATGATGGAAAACCATTT
CCTTAGTTTTAAAGTAAAGAACAGTTATAGAAGTACGCTCATCCTCGGTA
TcttgttttttatgaaagcttCGTGTCTCCTCCCAATTTTTTATGATGAT
CCTGTACCATGcctgaattttaatcaattttcattttctgtaCTTTCAGA
TTGTTAGATTTGATCAAAGATTGGAATGACGAAAGTGAGAGACGATGCGT
TCGAACTAATTATAATACTTGAAAAAATGTTCAAGTAGTTTAGTCAATAA
GTTGGTGTTAAAGAAAAGGAGATTTATAGATCGGAAAGAACTGAACCTCA
CAATGAATCAACGGGTGAAAGCGTCACCGTTCGTTGCATCCTAAAAGGCT
GGACCTTCACTTTACCAACAATACAAACGTACGAAGCCAAAATATTGCGC
AATACCGTTCAACGCTGTTTTATTTATTGTCAACCACGCCTTATCAGTAC
TTTGCCTCTGTATGACGCCAGTTAGGAAGCATGCACTAGCATCTTGGTAT
ATTATACGTCAAGAATTTATGGTACAGGATGCACTCAAAGATCCCATTTC
CAAGATTGTTTTTGGGTGGATCTATGGAAAAATGCATTGTATTGTAAACA
TTGAAATCTATTTAACGATCATGGTGTTGTTTTTTTGAGATACTCAGATA
TCTACACGTGAACACTTTTAGACAATGGAATGGTTTCATTGTTGTTAGTT
ATCATgtttttaaacaatactatgatgacgtcacacattcgtGGACCAAT
AGATTTGCAGCATTACTACTCACTTGATCAATAAACATTACCTGCTTTCG
ATTCAACGACCATCTAAGGTGTGTCATTAATATCGATGTATGAAATATGA
ATTTGCTGCGACAGGAAATATGTATATCCCTTATGGGGGTCTTTTTTCCC
TTTTAAGAGAACTTTCCGTTTGTTAAATTATTGTAACTTTACCAAAGGGG
AGTACGAAGCCCCTTTTGAATCACGAAACCCTCACTTAATGGgtattgat
ttttttgcttttatgaAAACGAGAATACTTTGTAAATACGTCAGATCTGT
ACATATTTTGGAATCAAATTAAAGaattttatatttattgtttTACTACA
ATTCTTTTCTCATTGTTTTTTTGACCACATCGAAAGTAGCTAACTTCCTA
Coding sequence (CDS) from alignment at sc0000131:459833..464382+ >TCONS_00011663 ID=TCONS_00011663|Name=TCONS_00011663|organism=Clytia hemisphaerica|type=CDS|length=1989bp|location=Sequence derived from alignment at sc0000131:459833..464382+ (Clytia hemisphaerica)
ATGAGCgacatattactgtattacattCACTTCTACAAAGAGTCTTCGGA
ACCAGCGTATGCTATGGTGTATAGTACAACGtcaattttaaggattttat
tgattttaacaTATTTGAGTTCTACCATGGCATGGATAGGGCTTGTTCGT
ACTTTTCCAATAGCGGAGAAGCCAAATAAACGTGTTCCAAATGCTACTGC
TATAGACTCTAAATTCAAACAGAAATCTGGATGTCGTAAAGATAAACATT
GCCAGCCAAGCGAGTATTGTAATCGTTACGAAAAGACTTGTTTAAATTGT
CGTAAAGAAGGCGAAACGTGTCGTCGCAACAAAATGTGTTGTCGTGGGAT
GGAATGCGCCGGAGGTGTTTGCCGTCGTAAAATAAGACTGGGAACTGAAG
GTGCTTTATGTACAAAAGACAGAGAATGTAATTATGGATTTTGTTGTGCT
CGTGAAAAAGGACAGAACGTTTGTAAACGAATGTTACAAGAAGGGGATAG
ATGTAGTAAACCAAATCGTTTGTATTTATGGTCTCATCAGTGTCCTTGTG
CTTATGGCATGAAATGTAGAAGAAGGAAGAGGACAAACAAATTGTTAGAT
TTGATCAAAGATTGGAATGACGAAAGTGAGAGACGATGCGTTCGAACTAA
TTATAATACTTGAATGAGCgacatattactgtattacattCACTTCTACA
AAGAGTCTTCGGAACCAGCGTATGCTATGGTGTATAGTACAACGtcaatt
ttaaggattttattgattttaacaTATTTGAGTTCTACCATGGCATGGAT
AGGGCTTGTTCGTACTTTTCCAATAGCGGAGAAGCCAAATAAACGTGTTC
CAAATGCTACTGCTATAGACTCTAAATTCAAACAGAAATCTGGATGTCGT
AAAGATAAACATTGCCAGCCAAGCGAGTATTGTAATCGTTACGAAAAGAC
TTGTTTAAATTGTCGTAAAGAAGGCGAAACGTGTCGTCGCAACAAAATGT
GTTGTCGTGGGATGGAATGCGCCGGAGGTGTTTGCCGTCGTAAAATAAGA
CTGGGAACTGAAGGTGCTTTATGTACAAAAGACAGAGAATGTAATTATGG
ATTTTGTTGTGCTCGTGAAAAAGGACAGAACGTTTGTAAACGAATGTTAC
AAGAAGGGGATAGATGTAGTAAACCAAATCGTTTGTATTTATGGTCTCAT
CAGTGTCCTTGTGCTTATGGCATGAAATGTAGAAGAAGGAAGAGGACAAA
CAAATTGTTAGATTTGATCAAAGATTGGAATGACGAAAGTGAGAGACGAT
GCGTTCGAACTAATTATAATACTTGAATGAGCgacatattactgtattac
attCACTTCTACAAAGAGTCTTCGGAACCAGCGTATGCTATGGTGTATAG
TACAACGtcaattttaaggattttattgattttaacaTATTTGAGTTCTA
CCATGGCATGGATAGGGCTTGTTCGTACTTTTCCAATAGCGGAGAAGCCA
AATAAACGTGTTCCAAATGCTACTGCTATAGACTCTAAATTCAAACAGAA
ATCTGGATGTCGTAAAGATAAACATTGCCAGCCAAGCGAGTATTGTAATC
GTTACGAAAAGACTTGTTTAAATTGTCGTAAAGAAGGCGAAACGTGTCGT
CGCAACAAAATGTGTTGTCGTGGGATGGAATGCGCCGGAGGTGTTTGCCG
TCGTAAAATAAGACTGGGAACTGAAGGTGCTTTATGTACAAAAGACAGAG
AATGTAATTATGGATTTTGTTGTGCTCGTGAAAAAGGACAGAACGTTTGT
AAACGAATGTTACAAGAAGGGGATAGATGTAGTAAACCAAATCGTTTGTA
TTTATGGTCTCATCAGTGTCCTTGTGCTTATGGCATGAAATGTAGAAGAA
GGAAGAGGACAAACAAATTGTTAGATTTGATCAAAGATTGGAATGACGAA
AGTGAGAGACGATGCGTTCGAACTAATTATAATACTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011663-exon-sc0000131-1491911889:459833..460356 | TCONS_00011663-exon-sc0000131-1491911889:459833..460356 | Clytia hemisphaerica | exon |
| TCONS_00011663-exon-sc0000131-1510915933:459833..460356 | TCONS_00011663-exon-sc0000131-1510915933:459833..460356 | Clytia hemisphaerica | exon |
| TCONS_00011663-exon-sc0000131-1575043694:459833..460356 | TCONS_00011663-exon-sc0000131-1575043694:459833..460356 | Clytia hemisphaerica | exon |
| TCONS_00011663-exon-sc0000131-1491911889:460671..461038 | TCONS_00011663-exon-sc0000131-1491911889:460671..461038 | Clytia hemisphaerica | exon |
| TCONS_00011663-exon-sc0000131-1510915933:460671..461038 | TCONS_00011663-exon-sc0000131-1510915933:460671..461038 | Clytia hemisphaerica | exon |
| TCONS_00011663-exon-sc0000131-1575043694:460671..461038 | TCONS_00011663-exon-sc0000131-1575043694:460671..461038 | Clytia hemisphaerica | exon |
| TCONS_00011663-exon-sc0000131-1491911889:463382..464382 | TCONS_00011663-exon-sc0000131-1491911889:463382..464382 | Clytia hemisphaerica | exon |
| TCONS_00011663-exon-sc0000131-1510915933:463382..464382 | TCONS_00011663-exon-sc0000131-1510915933:463382..464382 | Clytia hemisphaerica | exon |
| TCONS_00011663-exon-sc0000131-1575043694:463382..464382 | TCONS_00011663-exon-sc0000131-1575043694:463382..464382 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000131 | supercontig | sc0000131:459833..464382 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007275 | multicellular organism development |
| GO:0030178 | negative regulation of Wnt signaling pathway |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007275 |
multicellular organism development |
| biological_process |
GO:0030178 |
negative regulation of Wnt signaling pathway |
| cellular_component |
GO:0005576 |
extracellular region |
Blast
The following BLAST results are available for this feature:
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