TCONS_00011652 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011652
Unique NameTCONS_00011652
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3406

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011652 ID=TCONS_00011652|Name=TCONS_00011652|organism=Clytia hemisphaerica|type=transcript|length=3406bp
aaatttaTGATCAGTTTCCCGAGTGTTCTGCTCAAACACATGGTCGCACA
TACTCAAACATTTCCAACTATGTTTGCAACGGGTAAGTCAGACCACGtac
tttgttttgattctaGAATTCGACAAATGTTCGAAAGGGAATTTACACTA
GAAAATCGATTGAGTGCTGAACATTGAACTTTTTTTGCTGATGTGTTTAA
GAACTGAAAAAAAGGAATATTCATGCATATGACATATCACAGGGAAATTG
GCAATGGTGACATAATCTTATAAATCATAAAAGTAcagagaatatttttt
taaaagatattaaACATTGAGGAACCAAACATTGATCGCCAGATAAATTT
AGTttgtaaaattcaaaatggctgagGGGACATCAGCATTCGAAGGATGT
GCTGTAATTTTTCATAATGTTGTTGAATGGTATAAACCAACTGAAAATGT
AGCTTGCTATTTTTCAATGAAGGACAATGTTAGTATTGATACCGAAGAAC
AACCGCACTGTTTTGTTGCGATATTTCCAGTAGGATGGGATAATTTAGAG
GCAAACATAACACGGAAGAACTTTACGTTGATTGAAGCTGTGTCTGATAA
ATCATTCCAAATTGAGTTTCTTGAGAATGAACTCCCAGCAAATAATCCAG
ATGAGTTTTAtcagttttgtttttataacatCAAAACTGAAGTTGTCTAT
GGAGCAAGTTGTCCTTTCCAAATTTGTAACCGATCTGATTCTGAGCCGTT
CATTGTCTGTAGCAATGGAAGCCCAAGAAGTGAAACTGACAGAAGCAGTA
AGACTGAAACAAGCAACAGCATGAATACATGGGTTGACGAAAACAACATC
GAGATAACTGAAAGCGAAGATGACTTTACAACAGTTATGGTTACAAAAAA
AGCTGCTCATCTAAAAGAGGATTTGACCAAAGCAAAACTTCAAACTGAAG
AGCTCTTGAGATCAAACGAAAGCATGAAAACCCAAAGCAAGCATACTGTA
ACTGAGATTAACAGATTGAACCAGGACATTGATCTTGGGGAAAAGAAGGT
TGCTCTTCTTGAGGAAAATGTCAAAGAAAATGAGAAAGTTATCAACCATT
TGAATGGGAAGATGAGAAATATGAAAGAAGAATTAATTGCTGAACACAAC
GCCAAAGTTGCTGAACTTAGCAAGGAAATGGAAGCTCTCAATTCAGGTCG
AGCTAAGGCCTTGCTTGAAAATAACATCATGACATCAGAgttcaaaaaca
aagaagaatCACTTTTAGATGAGATTGCTCACCTGAAAATTACCCTTGAA
ATCGAGAAAAGCTCGTGCAAGTTGCTAGAAGATGTGCATAAGAATGTTCT
TGAAAAATTcagcaaaatcaaaaatgaacatGGAAAGGATCTTGAGgaag
caaaattgattcaaatCAAACTTGTTGAGGTTGAGTCACAAATCAAGATT
GAAAAACAGAAGAATATCACACTCCTTaatgattttgaaaatctgaCAGC
ATCTCATGAACAACTAAAAACTCTTGCAGAAAAGAAGGAGGCAGAATtcc
aagaaatcaaaaatagcTTGAGAGAGGAATTGGCATTGATGACAACCCAA
ATGCAGGAACATATTGACAAATTATCAAATGAGCTTgcagaatcaaaaca
aaaggaaCAAGAGCTTGAGCAGATCAACAATGAATCACaggaaagaatga
aagagctgGAGCCtcaaattgaagaaatttgTAGGCTAAAAGCTGAGGAG
ATTGAGCGTTTGAATGATGAAATCAAAAGACAAGCTGATTTGCTCCATGA
GAGTAATTCTCAATTGCACAACATCCAGTTGCAAATGGAcgagaaaacaa
atcaaatgcTTGAACTGGAGATGAATTTCAAGGAGAAAGAAGAGCAAACT
GAATTGATCATGGAAGATTTGAGATCAAAAGTCGAGGAATTACAAGAGAA
CCAGATAGAGGAGACCAAATCAAAATCACCAAAACCTTCAACAATGACTA
AATCTGAAGGATCCTATTATGCCTTGCAAGTTGCTtacaatttcattcaa
aaacaactaaaacaaTTCAAAGCTGAAAACGAGGAGCTCCGCAAAATGAA
CCACATGAATCTTCCCAGTGATATCAAGGATGTAGGAGTCAGTGATAATC
CTGATGCTGTAGTGAAAGAAAATTCAGAGCTCAAGCTTCGACTTCAATTT
GGTAAAAAGGCATTTGAAACGCAGTTTAAAGAGAATTCAAAACTGAAATC
AGaattgaaaacattgaaaagatcGACTTCAACAAAAGATTCAGCCgaat
ctttcaacaaatttgagTTTGTTGATGTCAAGGAAAAGAAAGAAGCATTG
GAATTGGAATTAACTGTCGTCAAAGGACAACTGGCAACTAAGGAAAAGAA
CGAAGAGGAACTTGTCACGCAACTCCAAGATCGCAACGATCGAGTACGAC
AATTTGAAGACAAATATAAACTGGCGAAAATCGAAAACGACATATTGAAA
CATCAAGTATCAGCGTTACTAGAAGGAGGTGCCACAGCAACCATTCGACG
AAAATTTGATCCAACCGTTCCTCACAAAACAGAAGCCAAGAAACCTGAAA
TAGCATATCCACCAAGCATGGTCAGAATCGAACGCGAGAAGCGTGAACAT
GCGAGATGGTTACCCTCAAAAACACCTCAGGAACCACCAAGCATTCAAAT
GATTCCTAACCGCGAACTACCTCAGCCCTCTGCTCCTACTATCAGTCAAG
TCGCTACTAATGTTGGTCATCAACCCGTCGTACCGGCCAATGGTTTGATC
GGACGCGGGCGAGGCCGAGGGGCTGGTCAACACCATGGTTACCAGCGAGA
TGGGTGTGTCTCTACTAGTCCAATATCCATTTGTCCGGTCTGTGAACACC
GATTCCCAGAGGGTTTTTCAGAACTCGCTGCAAGTAATCACGTAAATGAG
CATTTCACAGATCAGTAAAAGTCTTACTGAAACATTTCTTTGTTACGCCC
GAACGTCTTGTATCACCCCCTTCTCATAGGCCAATTAGGGTTTTAGCCAA
TGGGATTAGAATAACGGAATGAAACTCGAttttgatattcccatgttttt
tatgacTGCGGATTTGAATTCCACTCTTTTCAAGTTAGAAAATAAGATTT
GATTATTTAcccactgggtctgtgaaaagggggtgtcTTGTATTAATAAA
CCTTGCTGCAATCGAGGGTTGATTCATTTGATAAGTATAGTTTGATAATT
TATGTTTTCTTTCGTTATTTTTACATTAATTATCTAAAGAGGCTTGAGCT
ATTTTTAAATTGCTACTTAATAGACTAAATAACGTCTCAACAAACATTGT
CCACCGTCGCTCATACTGCAAAGGCTACATTGCTACCTTAGTGGATAATT
TTTTNN
Run BLAST on NCBI

protein sequence of TCONS_00011652-protein

>TCONS_00011652-protein ID=TCONS_00011652-protein|Name=TCONS_00011652-protein|organism=Clytia hemisphaerica|type=polypeptide|length=866bp
MAEGTSAFEGCAVIFHNVVEWYKPTENVACYFSMKDNVSIDTEEQPHCFV
AIFPVGWDNLEANITRKNFTLIEAVSDKSFQIEFLENELPANNPDEFYQF
CFYNIKTEVVYGASCPFQICNRSDSEPFIVCSNGSPRSETDRSSKTETSN
SMNTWVDENNIEITESEDDFTTVMVTKKAAHLKEDLTKAKLQTEELLRSN
ESMKTQSKHTVTEINRLNQDIDLGEKKVALLEENVKENEKVINHLNGKMR
NMKEELIAEHNAKVAELSKEMEALNSGRAKALLENNIMTSEFKNKEESLL
DEIAHLKITLEIEKSSCKLLEDVHKNVLEKFSKIKNEHGKDLEEAKLIQI
KLVEVESQIKIEKQKNITLLNDFENLTASHEQLKTLAEKKEAEFQEIKNS
LREELALMTTQMQEHIDKLSNELAESKQKEQELEQINNESQERMKELEPQ
IEEICRLKAEEIERLNDEIKRQADLLHESNSQLHNIQLQMDEKTNQMLEL
EMNFKEKEEQTELIMEDLRSKVEELQENQIEETKSKSPKPSTMTKSEGSY
YALQVAYNFIQKQLKQFKAENEELRKMNHMNLPSDIKDVGVSDNPDAVVK
ENSELKLRLQFGKKAFETQFKENSKLKSELKTLKRSTSTKDSAESFNKFE
FVDVKEKKEALELELTVVKGQLATKEKNEEELVTQLQDRNDRVRQFEDKY
KLAKIENDILKHQVSALLEGGATATIRRKFDPTVPHKTEAKKPEIAYPPS
MVRIEREKREHARWLPSKTPQEPPSIQMIPNRELPQPSAPTISQVATNVG
HQPVVPANGLIGRGRGRGAGQHHGYQRDGCVSTSPISICPVCEHRFPEGF
SELAASNHVNEHFTDQ
Run BLAST on NCBI

transcript from alignment at sc0000131:223764..228420+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011652 ID=TCONS_00011652|Name=TCONS_00011652|organism=Clytia hemisphaerica|type=transcript|length=4657bp|location=Sequence derived from alignment at sc0000131:223764..228420+ (Clytia hemisphaerica)
aaatttaTGATCAGTTTCCCGAGTGTTCTGCTCAAACACATGGTCGCACA
TACTCAAACATTTCCAACTATGTTTGCAACGGGTAAGTCAGACCACGtac
tttgttttgattctaGAATTCGACAAATGTTCGAAAGGGAATTTACACTA
GAAAATCGATTGAGTGCTGAACATTGAACTTTTTTTGCTGATGTGTTTAA
GAACTGAAAAAAAGGAATATTCATGCATATGACATATCACAGGGAAATTG
GCAATGGTGACATAATCTTATAAATCATAAAAGTAcagagaatatttttt
taaaagatattaaACATTGAGGAACCAAACATTGATCGCCAGATAAATTT
AGTttgtaaaattcaaaatggctgagGGGACATCAGCATTCGAAGGATGT
GCTGTAATTTTTCATAATGTTGTTGAATGGTATAAACCAACTGAAAATGT
AGCTTGCTATTTTTCAATGAAGGACAATGTTAGTATTGATACCGAAGAAC
AACCGCACTGTTTTGTTGCGATATTTCCAGTAGGATGGGATAATTTAGAG
GCAAACATAACACGGAAGAACTTTACGTTGATTGAAGCTGTGTCTGATAA
ATCATTCCAAATTGAGTTTCTTGAGAATGAACTCCCAGCAAATAATCCAG
ATGAGTTTTAtcagttttgtttttataacatCAAAACTGAAGTTGTCTAT
GGAGCAAGTTGTCCTTTCCAAATTTGTAACCGATCTGATTCTGAGCCGTT
CATTGTCTGTAGCAATGGAAGCCCAAGAAGTGAAACTGACAGAAGCAGTA
AGACTGAAACAAGCAACAGCATGAATACATGGGTTGACGAAAACAACATC
GAGATAACTGAAAGCGAAGATGACTTTACAACAGTTATGGTTACAAAAAA
AGCTGCTCATCTAAAAGAGGATTTGACCAAAGCAAAACTTCAAACTGAAG
AGCTCTTGAGATCAAACGAAAGCATGAAAACCCAAAGCAAGCATACTGTA
ACTGAGATTAACAGATTGAACCAGGACATTGATCTTGGGGAAAAGAAGGT
TGCTCTTCTTGAGGAAAATGTCAAAGAAAATGAGAAAGTTATCAACCATT
TGAATGGGAAGATGAGAAATATGAAAGAAGAATTAATTGCTGAACACAAC
GCCAAAGTTGCTGAACTTAGCAAGGAAATGGAAGCTCTCAATTCAGGTCG
AGCTAAGGCCTTGCTTGAAAATAACATCATGACATCAGAgttcaaaaaca
aagaagaatCACTTTTAGATGAGATTGCTCACCTGAAAATTACCCTTGAA
ATCGAGAAAAGCTCGTGCAAGTTGCTAGAAGATGTGCATAAGAATGTTCT
TGAAAAATTcagcaaaatcaaaaatgaacatGGAAAGGATCTTGAGgaag
caaaattgattcaaatCAAACTTGTTGAGGTTGAGTCACAAATCAAGATT
GAAAAACAGAAGAATATCACACTCCTTaatgattttgaaaatctgaCAGC
ATCTCATGAACAACTAAAAACTCTTGCAGAAAAGAAGGAGGCAGAATtcc
aagaaatcaaaaatagcTTGAGAGAGGAATTGGCATTGATGACAACCCAA
ATGCAGGAACATATTGACAAATTATCAAATGAGCTTgcagaatcaaaaca
aaaggaaCAAGAGCTTGAGCAGATCAACAATGAATCACaggaaagaatga
aagagctgGAGCCtcaaattgaagaaatttgTAGGCTAAAAGCTGAGGAG
ATTGAGCGTTTGAATGATGAAATCAAAAGACAAGCTGATTTGCTCCATGA
GAGTAATTCTCAATTGCACAACATCCAGTTGCAAATGGAcgagaaaacaa
atcaaatgcTTGAACTGGAGATGAATTTCAAGGAGAAAGAAGAGCAAACT
GAATTGATCATGGAAGATTTGAGATCAAAAGTCGAGGAATTACAAGAGAA
CCAGATAGAGGAGACCAAATCAAAATCACCAAAACCTTCAACAATGACTA
AATCTGAAGGATCCTATTATGCCTTGCAAGTTGCTtacaatttcattcaa
aaacaactaaaacaaTTCAAAGCTGAAAACGAGGAGCTCCGCAAAATGAA
CCACATGAATCTTCCCAGTGATATCAAGGATGTAGGAGTCAGTGATAATC
CTGATGCTGTAGTGAAAGAAAATTCAGAGCTCAAGCTTCGACTTCAATTT
GGTAAAAAGGCATTTGAAACGCAGTTTAAAGAGAATTCAAAACTGAAATC
AGaattgaaaacattgaaaagatcGACTTCAACAAAAGATTCAGCCgaat
ctttcaacaaatttgagGTTTGTAGGATTATATTTCCTTGTTTCATGTTT
CGTTATTGTTTAAGAAGTACTGTTTAGCAAAGCTGTATGCTTGATAAAGT
TGAAGTACTTTTCCCACAATACCTTTTAAATCCTTAtcaaggggccgtcc
acatagtacgtacgcactaagagGGGGAGGGGAGGGATCAAAGGAAactg
tacgtacgcagagaaaaaattttcatagtccttttttgcttgttttttgt
cgacttttacgcttcttatacgcatcaaagaaaagaaaagaaaagtttct
taataaacatcgAGTTTCATGTACGAATTTCATGAATGTgataaaggtcc
gaaccaaacgatttgaattcgaaattttcttcaaccgaggggggggggNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNggggggggggtgaatgaaaaagtacgtactttaCCAgg
agggggtatagccatttgcgtacgcttgcgtacaggggggaggggtattc
gattttcgacattttagtgcgtacgtactatgtggacggcccccaaTAAG
AAAAGAGAATCGTCCAAAAAAGActggttgttttttttcaaatacgaAAG
TAACTTATTCATCTTTCAATATCTTTCATAGTTTGTTGATGTCAAGGAAA
AGAAAGAAGCATTGGAATTGGAATTAACTGTCGTCAAAGGACAACTGGCA
ACTAAGGAAAAGAACGAAGAGGAACTTGTCACGCAACTCCAAGATCGCAA
CGATCGAGTACGACAATTTGAAGACAAATATAAACTGGCGAAAATCGAAA
ACGACATATTGAAACATCAAGTATCAGCGTTACTAGAAGGAGGTAAGGAA
CTCTTTCTTATTGGTCATCAAGGCTAGTGGGCTGAAAAGTATTACACATT
TTCTTTTTACAAGTAACCAGGATACAAAGGTTTAAGCCCTTAAATTAGCC
AATTCTTTCTCAATATCTCGCAAGGTAGCTTTTTAGATAGAGCCCTTGAC
CCATGAGCataaatatagtataatattagggcaatcaaagaattttttta
gaaaatgagctagaatgctaagcaaccccagccctgacccgaaaaaATTT
GAGTTGCTTATACAAAAATCTGTTTATGTTACCCGATATCCGGCAATAGG
ACGATCGATTACCAGAAGAGGTGAAATCCAGCAAAAAAATCTATGATTTT
GTGTATTCTAGGATTGTATGGAGGTCAAAAATGAAACGTTACTGTGCTAG
ATACaattttaacccttttttcAATGAATGTTCTCTCGTATATATCAACA
CTTAAGTTACCATTGCACATTTTAGATTACCAACTATACTTGGTTCATCT
TAATAATTTCCATTTATGTTTCTCATAAGGTGCCACAGCAACCATTCGAC
GAAAATTTGATCCAACCGTTCCTCACAAAACAGAAGCCAAGAAACCTGAA
ATAGCATATCCACCAAGCATGGTCAGAATCGAACGCGAGAAGCGTGAACA
TGCGAGATGGTTACCCTCAAAAACACCTCAGGAACCACCAAGCATTCAAA
TGATTCCTAACCGCGAACTACCTCAGCCCTCTGCTCCTACTATCAGTCAA
GTCGCTACTAATGTTGGTCATCAACCCGTCGTACCGGCCAATGGTTTGAT
CGGACGCGGGCGAGGCCGAGGGGCTGGTCAACACCATGGTTACCAGCGAG
ATGGGTGTGTCTCTACTAGTCCAATATCCATTTGTCCGGTCTGTGAACAC
CGATTCCCAGAGGGTTTTTCAGAACTCGCTGCAAGTAATCACGTAAATGA
GCATTTCACAGATCAGTAAAAGTCTTACTGAAACATTTCTTTGTTACGCC
CGAACGTCTTGTATCACCCCCTTCTCATAGGCCAATTAGGGTTTTAGCCA
ATGGGATTAGAATAACGGAATGAAACTCGAttttgatattcccatgtttt
ttatgacTGCGGATTTGAATTCCACTCTTTTCAAGTTAGAAAATAAGATT
TGATTATTTAcccactgggtctgtgaaaagggggtgtcTTGTATTAATAA
ACCTTGCTGCAATCGAGGGTTGATTCATTTGATAAGTATAGTTTGATAAT
TTATGTTTTCTTTCGTTATTTTTACATTAATTATCTAAAGAGGCTTGAGC
TATTTTTAAATTGCTACTTAATAGACTAAATAACGTCTCAACAAACATTG
TCCACCGTCGCTCATACTGCAAAGGCTACATTGCTACCTTAGTGGATAAT
TTTTTNN

Coding sequence (CDS) from alignment at sc0000131:223764..228420+

>TCONS_00011652 ID=TCONS_00011652|Name=TCONS_00011652|organism=Clytia hemisphaerica|type=CDS|length=7803bp|location=Sequence derived from alignment at sc0000131:223764..228420+ (Clytia hemisphaerica)
atggctgagGGGACATCAGCATTCGAAGGATGTGCTGTAATTTTTCATAA
TGTTGTTGAATGGTATAAACCAACTGAAAATGTAGCTTGCTATTTTTCAA
TGAAGGACAATGTTAGTATTGATACCGAAGAACAACCGCACTGTTTTGTT
GCGATATTTCCAGTAGGATGGGATAATTTAGAGGCAAACATAACACGGAA
GAACTTTACGTTGATTGAAGCTGTGTCTGATAAATCATTCCAAATTGAGT
TTCTTGAGAATGAACTCCCAGCAAATAATCCAGATGAGTTTTAtcagttt
tgtttttataacatCAAAACTGAAGTTGTCTATGGAGCAAGTTGTCCTTT
CCAAATTTGTAACCGATCTGATTCTGAGCCGTTCATTGTCTGTAGCAATG
GAAGCCCAAGAAGTGAAACTGACAGAAGCAGTAAGACTGAAACAAGCAAC
AGCATGAATACATGGGTTGACGAAAACAACATCGAGATAACTGAAAGCGA
AGATGACTTTACAACAGTTATGGTTACAAAAAAAGCTGCTCATCTAAAAG
AGGATTTGACCAAAGCAAAACTTCAAACTGAAGAGCTCTTGAGATCAAAC
GAAAGCATGAAAACCCAAAGCAAGCATACTGTAACTGAGATTAACAGATT
GAACCAGGACATTGATCTTGGGGAAAAGAAGGTTGCTCTTCTTGAGGAAA
ATGTCAAAGAAAATGAGAAAGTTATCAACCATTTGAATGGGAAGATGAGA
AATATGAAAGAAGAATTAATTGCTGAACACAACGCCAAAGTTGCTGAACT
TAGCAAGGAAATGGAAGCTCTCAATTCAGGTCGAGCTAAGGCCTTGCTTG
AAAATAACATCATGACATCAGAgttcaaaaacaaagaagaatCACTTTTA
GATGAGATTGCTCACCTGAAAATTACCCTTGAAATCGAGAAAAGCTCGTG
CAAGTTGCTAGAAGATGTGCATAAGAATGTTCTTGAAAAATTcagcaaaa
tcaaaaatgaacatGGAAAGGATCTTGAGgaagcaaaattgattcaaatC
AAACTTGTTGAGGTTGAGTCACAAATCAAGATTGAAAAACAGAAGAATAT
CACACTCCTTaatgattttgaaaatctgaCAGCATCTCATGAACAACTAA
AAACTCTTGCAGAAAAGAAGGAGGCAGAATtccaagaaatcaaaaatagc
TTGAGAGAGGAATTGGCATTGATGACAACCCAAATGCAGGAACATATTGA
CAAATTATCAAATGAGCTTgcagaatcaaaacaaaaggaaCAAGAGCTTG
AGCAGATCAACAATGAATCACaggaaagaatgaaagagctgGAGCCtcaa
attgaagaaatttgTAGGCTAAAAGCTGAGGAGATTGAGCGTTTGAATGA
TGAAATCAAAAGACAAGCTGATTTGCTCCATGAGAGTAATTCTCAATTGC
ACAACATCCAGTTGCAAATGGAcgagaaaacaaatcaaatgcTTGAACTG
GAGATGAATTTCAAGGAGAAAGAAGAGCAAACTGAATTGATCATGGAAGA
TTTGAGATCAAAAGTCGAGGAATTACAAGAGAACCAGATAGAGGAGACCA
AATCAAAATCACCAAAACCTTCAACAATGACTAAATCTGAAGGATCCTAT
TATGCCTTGCAAGTTGCTtacaatttcattcaaaaacaactaaaacaaTT
CAAAGCTGAAAACGAGGAGCTCCGCAAAATGAACCACATGAATCTTCCCA
GTGATATCAAGGATGTAGGAGTCAGTGATAATCCTGATGCTGTAGTGAAA
GAAAATTCAGAGCTCAAGCTTCGACTTCAATTTGGTAAAAAGGCATTTGA
AACGCAGTTTAAAGAGAATTCAAAACTGAAATCAGaattgaaaacattga
aaagatcGACTTCAACAAAAGATTCAGCCgaatctttcaacaaatttgag
TTTGTTGATGTCAAGGAAAAGAAAGAAGCATTGGAATTGGAATTAACTGT
CGTCAAAGGACAACTGGCAACTAAGGAAAAGAACGAAGAGGAACTTGTCA
CGCAACTCCAAGATCGCAACGATCGAGTACGACAATTTGAAGACAAATAT
AAACTGGCGAAAATCGAAAACGACATATTGAAACATCAAGTATCAGCGTT
ACTAGAAGGAGGTGCCACAGCAACCATTCGACGAAAATTTGATCCAACCG
TTCCTCACAAAACAGAAGCCAAGAAACCTGAAATAGCATATCCACCAAGC
ATGGTCAGAATCGAACGCGAGAAGCGTGAACATGCGAGATGGTTACCCTC
AAAAACACCTCAGGAACCACCAAGCATTCAAATGATTCCTAACCGCGAAC
TACCTCAGCCCTCTGCTCCTACTATCAGTCAAGTCGCTACTAATGTTGGT
CATCAACCCGTCGTACCGGCCAATGGTTTGATCGGACGCGGGCGAGGCCG
AGGGGCTGGTCAACACCATGGTTACCAGCGAGATGGGTGTGTCTCTACTA
GTCCAATATCCATTTGTCCGGTCTGTGAACACCGATTCCCAGAGGGTTTT
TCAGAACTCGCTGCAAGTAATCACGTAAATGAGCATTTCACAGATCAGTA
AatggctgagGGGACATCAGCATTCGAAGGATGTGCTGTAATTTTTCATA
ATGTTGTTGAATGGTATAAACCAACTGAAAATGTAGCTTGCTATTTTTCA
ATGAAGGACAATGTTAGTATTGATACCGAAGAACAACCGCACTGTTTTGT
TGCGATATTTCCAGTAGGATGGGATAATTTAGAGGCAAACATAACACGGA
AGAACTTTACGTTGATTGAAGCTGTGTCTGATAAATCATTCCAAATTGAG
TTTCTTGAGAATGAACTCCCAGCAAATAATCCAGATGAGTTTTAtcagtt
ttgtttttataacatCAAAACTGAAGTTGTCTATGGAGCAAGTTGTCCTT
TCCAAATTTGTAACCGATCTGATTCTGAGCCGTTCATTGTCTGTAGCAAT
GGAAGCCCAAGAAGTGAAACTGACAGAAGCAGTAAGACTGAAACAAGCAA
CAGCATGAATACATGGGTTGACGAAAACAACATCGAGATAACTGAAAGCG
AAGATGACTTTACAACAGTTATGGTTACAAAAAAAGCTGCTCATCTAAAA
GAGGATTTGACCAAAGCAAAACTTCAAACTGAAGAGCTCTTGAGATCAAA
CGAAAGCATGAAAACCCAAAGCAAGCATACTGTAACTGAGATTAACAGAT
TGAACCAGGACATTGATCTTGGGGAAAAGAAGGTTGCTCTTCTTGAGGAA
AATGTCAAAGAAAATGAGAAAGTTATCAACCATTTGAATGGGAAGATGAG
AAATATGAAAGAAGAATTAATTGCTGAACACAACGCCAAAGTTGCTGAAC
TTAGCAAGGAAATGGAAGCTCTCAATTCAGGTCGAGCTAAGGCCTTGCTT
GAAAATAACATCATGACATCAGAgttcaaaaacaaagaagaatCACTTTT
AGATGAGATTGCTCACCTGAAAATTACCCTTGAAATCGAGAAAAGCTCGT
GCAAGTTGCTAGAAGATGTGCATAAGAATGTTCTTGAAAAATTcagcaaa
atcaaaaatgaacatGGAAAGGATCTTGAGgaagcaaaattgattcaaat
CAAACTTGTTGAGGTTGAGTCACAAATCAAGATTGAAAAACAGAAGAATA
TCACACTCCTTaatgattttgaaaatctgaCAGCATCTCATGAACAACTA
AAAACTCTTGCAGAAAAGAAGGAGGCAGAATtccaagaaatcaaaaatag
cTTGAGAGAGGAATTGGCATTGATGACAACCCAAATGCAGGAACATATTG
ACAAATTATCAAATGAGCTTgcagaatcaaaacaaaaggaaCAAGAGCTT
GAGCAGATCAACAATGAATCACaggaaagaatgaaagagctgGAGCCtca
aattgaagaaatttgTAGGCTAAAAGCTGAGGAGATTGAGCGTTTGAATG
ATGAAATCAAAAGACAAGCTGATTTGCTCCATGAGAGTAATTCTCAATTG
CACAACATCCAGTTGCAAATGGAcgagaaaacaaatcaaatgcTTGAACT
GGAGATGAATTTCAAGGAGAAAGAAGAGCAAACTGAATTGATCATGGAAG
ATTTGAGATCAAAAGTCGAGGAATTACAAGAGAACCAGATAGAGGAGACC
AAATCAAAATCACCAAAACCTTCAACAATGACTAAATCTGAAGGATCCTA
TTATGCCTTGCAAGTTGCTtacaatttcattcaaaaacaactaaaacaaT
TCAAAGCTGAAAACGAGGAGCTCCGCAAAATGAACCACATGAATCTTCCC
AGTGATATCAAGGATGTAGGAGTCAGTGATAATCCTGATGCTGTAGTGAA
AGAAAATTCAGAGCTCAAGCTTCGACTTCAATTTGGTAAAAAGGCATTTG
AAACGCAGTTTAAAGAGAATTCAAAACTGAAATCAGaattgaaaacattg
aaaagatcGACTTCAACAAAAGATTCAGCCgaatctttcaacaaatttga
gTTTGTTGATGTCAAGGAAAAGAAAGAAGCATTGGAATTGGAATTAACTG
TCGTCAAAGGACAACTGGCAACTAAGGAAAAGAACGAAGAGGAACTTGTC
ACGCAACTCCAAGATCGCAACGATCGAGTACGACAATTTGAAGACAAATA
TAAACTGGCGAAAATCGAAAACGACATATTGAAACATCAAGTATCAGCGT
TACTAGAAGGAGGTGCCACAGCAACCATTCGACGAAAATTTGATCCAACC
GTTCCTCACAAAACAGAAGCCAAGAAACCTGAAATAGCATATCCACCAAG
CATGGTCAGAATCGAACGCGAGAAGCGTGAACATGCGAGATGGTTACCCT
CAAAAACACCTCAGGAACCACCAAGCATTCAAATGATTCCTAACCGCGAA
CTACCTCAGCCCTCTGCTCCTACTATCAGTCAAGTCGCTACTAATGTTGG
TCATCAACCCGTCGTACCGGCCAATGGTTTGATCGGACGCGGGCGAGGCC
GAGGGGCTGGTCAACACCATGGTTACCAGCGAGATGGGTGTGTCTCTACT
AGTCCAATATCCATTTGTCCGGTCTGTGAACACCGATTCCCAGAGGGTTT
TTCAGAACTCGCTGCAAGTAATCACGTAAATGAGCATTTCACAGATCAGT
AAatggctgagGGGACATCAGCATTCGAAGGATGTGCTGTAATTTTTCAT
AATGTTGTTGAATGGTATAAACCAACTGAAAATGTAGCTTGCTATTTTTC
AATGAAGGACAATGTTAGTATTGATACCGAAGAACAACCGCACTGTTTTG
TTGCGATATTTCCAGTAGGATGGGATAATTTAGAGGCAAACATAACACGG
AAGAACTTTACGTTGATTGAAGCTGTGTCTGATAAATCATTCCAAATTGA
GTTTCTTGAGAATGAACTCCCAGCAAATAATCCAGATGAGTTTTAtcagt
tttgtttttataacatCAAAACTGAAGTTGTCTATGGAGCAAGTTGTCCT
TTCCAAATTTGTAACCGATCTGATTCTGAGCCGTTCATTGTCTGTAGCAA
TGGAAGCCCAAGAAGTGAAACTGACAGAAGCAGTAAGACTGAAACAAGCA
ACAGCATGAATACATGGGTTGACGAAAACAACATCGAGATAACTGAAAGC
GAAGATGACTTTACAACAGTTATGGTTACAAAAAAAGCTGCTCATCTAAA
AGAGGATTTGACCAAAGCAAAACTTCAAACTGAAGAGCTCTTGAGATCAA
ACGAAAGCATGAAAACCCAAAGCAAGCATACTGTAACTGAGATTAACAGA
TTGAACCAGGACATTGATCTTGGGGAAAAGAAGGTTGCTCTTCTTGAGGA
AAATGTCAAAGAAAATGAGAAAGTTATCAACCATTTGAATGGGAAGATGA
GAAATATGAAAGAAGAATTAATTGCTGAACACAACGCCAAAGTTGCTGAA
CTTAGCAAGGAAATGGAAGCTCTCAATTCAGGTCGAGCTAAGGCCTTGCT
TGAAAATAACATCATGACATCAGAgttcaaaaacaaagaagaatCACTTT
TAGATGAGATTGCTCACCTGAAAATTACCCTTGAAATCGAGAAAAGCTCG
TGCAAGTTGCTAGAAGATGTGCATAAGAATGTTCTTGAAAAATTcagcaa
aatcaaaaatgaacatGGAAAGGATCTTGAGgaagcaaaattgattcaaa
tCAAACTTGTTGAGGTTGAGTCACAAATCAAGATTGAAAAACAGAAGAAT
ATCACACTCCTTaatgattttgaaaatctgaCAGCATCTCATGAACAACT
AAAAACTCTTGCAGAAAAGAAGGAGGCAGAATtccaagaaatcaaaaata
gcTTGAGAGAGGAATTGGCATTGATGACAACCCAAATGCAGGAACATATT
GACAAATTATCAAATGAGCTTgcagaatcaaaacaaaaggaaCAAGAGCT
TGAGCAGATCAACAATGAATCACaggaaagaatgaaagagctgGAGCCtc
aaattgaagaaatttgTAGGCTAAAAGCTGAGGAGATTGAGCGTTTGAAT
GATGAAATCAAAAGACAAGCTGATTTGCTCCATGAGAGTAATTCTCAATT
GCACAACATCCAGTTGCAAATGGAcgagaaaacaaatcaaatgcTTGAAC
TGGAGATGAATTTCAAGGAGAAAGAAGAGCAAACTGAATTGATCATGGAA
GATTTGAGATCAAAAGTCGAGGAATTACAAGAGAACCAGATAGAGGAGAC
CAAATCAAAATCACCAAAACCTTCAACAATGACTAAATCTGAAGGATCCT
ATTATGCCTTGCAAGTTGCTtacaatttcattcaaaaacaactaaaacaa
TTCAAAGCTGAAAACGAGGAGCTCCGCAAAATGAACCACATGAATCTTCC
CAGTGATATCAAGGATGTAGGAGTCAGTGATAATCCTGATGCTGTAGTGA
AAGAAAATTCAGAGCTCAAGCTTCGACTTCAATTTGGTAAAAAGGCATTT
GAAACGCAGTTTAAAGAGAATTCAAAACTGAAATCAGaattgaaaacatt
gaaaagatcGACTTCAACAAAAGATTCAGCCgaatctttcaacaaatttg
agTTTGTTGATGTCAAGGAAAAGAAAGAAGCATTGGAATTGGAATTAACT
GTCGTCAAAGGACAACTGGCAACTAAGGAAAAGAACGAAGAGGAACTTGT
CACGCAACTCCAAGATCGCAACGATCGAGTACGACAATTTGAAGACAAAT
ATAAACTGGCGAAAATCGAAAACGACATATTGAAACATCAAGTATCAGCG
TTACTAGAAGGAGGTGCCACAGCAACCATTCGACGAAAATTTGATCCAAC
CGTTCCTCACAAAACAGAAGCCAAGAAACCTGAAATAGCATATCCACCAA
GCATGGTCAGAATCGAACGCGAGAAGCGTGAACATGCGAGATGGTTACCC
TCAAAAACACCTCAGGAACCACCAAGCATTCAAATGATTCCTAACCGCGA
ACTACCTCAGCCCTCTGCTCCTACTATCAGTCAAGTCGCTACTAATGTTG
GTCATCAACCCGTCGTACCGGCCAATGGTTTGATCGGACGCGGGCGAGGC
CGAGGGGCTGGTCAACACCATGGTTACCAGCGAGATGGGTGTGTCTCTAC
TAGTCCAATATCCATTTGTCCGGTCTGTGAACACCGATTCCCAGAGGGTT
TTTCAGAACTCGCTGCAAGTAATCACGTAAATGAGCATTTCACAGATCAG
TAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006537XLOC_006537Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011652-proteinTCONS_00011652-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011652-exon-sc0000131-1491911889:223764..226080TCONS_00011652-exon-sc0000131-1491911889:223764..226080Clytia hemisphaericaexon
TCONS_00011652-exon-sc0000131-1510915933:223764..226080TCONS_00011652-exon-sc0000131-1510915933:223764..226080Clytia hemisphaericaexon
TCONS_00011652-exon-sc0000131-1575043694:223764..226080TCONS_00011652-exon-sc0000131-1575043694:223764..226080Clytia hemisphaericaexon
TCONS_00011652-exon-sc0000131-1491911889:226795..227005TCONS_00011652-exon-sc0000131-1491911889:226795..227005Clytia hemisphaericaexon
TCONS_00011652-exon-sc0000131-1510915933:226795..227005TCONS_00011652-exon-sc0000131-1510915933:226795..227005Clytia hemisphaericaexon
TCONS_00011652-exon-sc0000131-1575043694:226795..227005TCONS_00011652-exon-sc0000131-1575043694:226795..227005Clytia hemisphaericaexon
TCONS_00011652-exon-sc0000131-1491911889:227543..228420TCONS_00011652-exon-sc0000131-1491911889:227543..228420Clytia hemisphaericaexon
TCONS_00011652-exon-sc0000131-1510915933:227543..228420TCONS_00011652-exon-sc0000131-1510915933:227543..228420Clytia hemisphaericaexon
TCONS_00011652-exon-sc0000131-1575043694:227543..228420TCONS_00011652-exon-sc0000131-1575043694:227543..228420Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000131supercontigsc0000131:223764..228420 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.74795	7.28538	14.0276	15.4096	95.5228	70.7293	88.3568	96.8899	71.0975	96.4292	91.8391	70.9816	133.398	91.3569	64.5537	87.2547	57.8245	79.2606	131.376	208.388	68.2346	72.969	43.1287	61.279	108.006	108.844	329.035	376.619	321.082	235.895
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011652 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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