TCONS_00011490 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011490
Unique NameTCONS_00011490
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1667

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011490 ID=TCONS_00011490|Name=TCONS_00011490|organism=Clytia hemisphaerica|type=transcript|length=1667bp
GCTTCATGTCAAATGTGTTTGTGGGTCTTGCTCCACCACCACACacgagc
ctaaaaatgtttttgcttcgCTGACCCGGAAATTTCAATGTAAACGAGCT
CAAAAGTAAACAATAAGCGAGACATAACAAAGAtggtagatttatttttg
aagacgtGGTAGTGCAATTTTGCCGcattttgctgaaaaaataccaagtt
ttTACCATTCATTACATGACattgtgaaataaaaaaaaatgggtGTTTGC
AAGTGTAANTTTtaccattcattcattcatcacCTTGTGAAATCAAAGAA
GATGGGTGTTTGCAAGtgtaaacaaagaaatgttacgAATCAATTTTGTT
ATGGATGTCGTGTGAATGTTTGTGAATCCTGCATGATTAAAGATCATCAA
AGGTGTATCATCAAATCATATGTACATTGGCTTCAAGACAGTGATTTCAG
TGCTACTTGTTCTTTATGCCTGGAGAGTATCGATAAAGGAGAAGTGATAA
GGCTAACATGTTACGATTTGTTTCATTGGGATTGCTTCAATGCTTGGGCA
TTAAAACTTCCAGAGTCAACTCCAAAGACTGGCTACACATGTCCTGACTG
CAAAGCACAAATCTTTCCACCTAAAGCATTAGTTTCACCAATAGCAGACG
TTTtgcgtcaaaaattttcaacagttgGATGGGGACGAAAAGGGTTAGGT
CTACCACTACAAACTCATGAGCAGaCGTCACCAAGGCCCACCACTCCAGT
ATTAAGTGATACGCATCAACAAGTATCATCCACACCTAAATCAAGTTACA
AACCGTTAGCGTCTGTCACTCCTTTCGTACCTCTATCCAACAAACAGCAA
CAGAAAATCGAACAACATAATGCATATCAAACACAACAAAACCTTTCAAA
TACACAACAACATCAACAAACACATGATACAAAACCATCGCAACAATCAT
CTATGTTTAGTAGAGATAAATACCCGACTGAAGGCACGTTATCACGGAAA
CAAGCACCAACGACACGATACGAAGAATCTAAAATCAATTTATCGTTTGA
TCACgatgaaaataaatataaacGAAAAGGTTTCATGCATTGGCTCTCTA
ACATGATGAGGTTATGGAAAAAGCCAGGCGAAATAAAGAAAGAAGCCAAT
ATGACGTATAAACGAGTATTCATCGCTTTAGTGTTATTTACATTGATCTT
TATGACTGTTATTTATTTCATGTCTGCCCTGGGTGGAAGGGTCGCTGAAA
ATGACCCATTGTTAGATCCAGACCTCAACAGATTTGTAAAAGTTGGTAAT
AATCATATTGGTGGCGTAGGCGGTCAAGATTTAACGATGTGAAATGGTTG
TTTTTGATTTCTTGGATTTTTGTTACCCTGATAGAGCACTTCGTTGAGCG
GTTCATTTCATGACCAAATATAGCCGATTCGCACACGCACGCAAATGAAA
CGTCACCATTTTCTGGTGTGGAAATTTAAATGGAATCTGGAAATataatt
tgattaaaaacattgttttaCAGACGTGTTCGATTGGCTTGAAAAGACGA
TATTATAAAGGATAGGATTATTTGATTAAAGTTTACaacttaaaggaaga
aattttggtgggtactcttaggttccaaatataAAGGTTCTATATATAGG
TTATATATAGGTTCCTG
Run BLAST on NCBI

protein sequence of TCONS_00011490-protein

>TCONS_00011490-protein ID=TCONS_00011490-protein|Name=TCONS_00011490-protein|organism=Clytia hemisphaerica|type=polypeptide|length=367bp
MGVCKCXFYHSFIHHLVKSKKMGVCKCKQRNVTNQFCYGCRVNVCESCMI
KDHQRCIIKSYVHWLQDSDFSATCSLCLESIDKGEVIRLTCYDLFHWDCF
NAWALKLPESTPKTGYTCPDCKAQIFPPKALVSPIADVLRQKFSTVGWGR
KGLGLPLQTHEQTSPRPTTPVLSDTHQQVSSTPKSSYKPLASVTPFVPLS
NKQQQKIEQHNAYQTQQNLSNTQQHQQTHDTKPSQQSSMFSRDKYPTEGT
LSRKQAPTTRYEESKINLSFDHDENKYKRKGFMHWLSNMMRLWKKPGEIK
KEANMTYKRVFIALVLFTLIFMTVIYFMSALGGRVAENDPLLDPDLNRFV
KVGNNHIGGVGGQDLTM
Run BLAST on NCBI

transcript from alignment at sc0000128:316653..322768-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011490 ID=TCONS_00011490|Name=TCONS_00011490|organism=Clytia hemisphaerica|type=transcript|length=6116bp|location=Sequence derived from alignment at sc0000128:316653..322768- (Clytia hemisphaerica)
GCTTCATGTCAAATGTGTTTGTGGGTCTTGCTCCACCACCACACACGAGC
CTAAAAATGTTTTTGCTTCGCTGACCCGGAAATTTCAATGTAAACGAGCT
CAAAAGTAAACAATAAGCGAGACATAACAAAGATGGTAGATTTATTTTTG
AAGACGTGGTAGTGCAATTTTGCCGCATTTTGCTGAAAAAATACCAAGTT
TTTACCATTCATTACATGACATTGTGAAATAAAAAAAAATGGGTGTTTGC
AAGTGTAANTTTTACCATTCATTCATTCATCACCTTGTGAAATCAAAGAA
GATGGGTGTTTGCAAGTGTAAACAAAGAAATGTTACGAATCAATTTTGTT
ATGGATGTCGTGTGAATGTTTGTGAATCCTGCATGATTAAAGATCATCAA
AGGGTAAGGTTACTTTTACCAAGGTCATTTTAATAAAGTCAATGGGAACC
TTGTTTGGCCTTTTTGTTTTCTTTCAGTTAAAATATGCCATTTTAGAGAT
GTAAAAATGGGTCAAAATTAGTTTGGATACTGAAAGAAAACTATTAACAA
GAGATATTTAAGTTTCCCTTCAAATGATTCTTCCTTACAGCTACCAGTTT
TAAATAAACACCCCTCCTTCAGGGGGAGGCGTTCGTTTTAACCAGGGGAT
GTCAATCGAAAATTTCGATTGTCGAACCAATCAAATATAATCGAAATCAA
TCGAAGTGATTGACCAAATCGATCGAAGTCAATCGAAGTGAATGATCGAA
ACGATCGAAGTCAATCGAAGATTTACATCTTTTTAAGATTGATTTGGTTC
GATTGGCTTCGATTGATTCGGTCAATCACTTCGATTGGTTTCGATTATAT
TCGATTGGTGCGACAATCGAAGTTTTCGATTGACATCCTCTGGTTAGTAC
CGTCTGGCCTGGGTACTAATAATGACTTATAAATGCTCAAAAACTATTTT
TCAAACTCAGGCGCATACTATTAACCTACCATAAAATCTCTTTAGAAAGT
TCTAAAAGATTTTTAAAAGTACTGAAAAAAACACATCATAATCAATCCAT
CCAGCATCAACCAACCGATCGAACAATCAAAACCAATCGAAGTGATTGAT
CGAATAAATCGAATCCAATCAAAGACGATCAAAGATTTACATATTTTTCC
CATTTTGATTGAATTCAATTGTTCGATCAATCACTTCGATTGAGTTCGAT
TGATTCGAACAATCACTTCGATGTACTTCGATTGAATTCGATCGATTCGA
CTCCAAATCGAATTCGATTGAGTTCGATTGACATCCCCTGGTTTTAAAGG
GGGCGTTTATCAAAAATTTCTCCTTTTATAGGTAGGGAGGGGCATTTATT
CGAAGTAATACGGTAGTCAAAATCAACTAGTCCAGAAATCAGAAAAGACA
GAGTTAGAGATAGAAAATAGAGAAAAAGAGGAGATGGGCAGAATGAGAGA
TTGAAACTAGATCTTTCTGTGATGTGCAGACCAGCTTGGTTGAGGAATCT
TGATTGGGGGCAATCACAAATATCTTTATTTCTTACATGTCCACATTCTA
CAGAGGCCAACTCTCACGCATTGAGCAAGCGCCTCACACAATTTTTGAAA
AATTTGATTTCTCACATGTTTTCCATTTTTTGAGAAAGTTTTTGACTTTT
TATGGAAAGATGTTTCCCCAAATGTTTGATTTATTTGGAGTTTGTGCTAC
CATTTACACCCAGCAAACAGCAAAAAAAAACCACCCTGATGTGTTTTTTC
GATTTTTAAGAAAGCTTTTCCAATTTATCTTTGGAAAAAGATCCCCTGAT
TTCCAATTTCGGAAAATCAGAGAATCTAGATTTTGAATTTCCCCTTAAAA
TTTCTATCTCATACAAAATGAACATGATGAACATAAGGTCTACAAAATAC
CTTTATTTTTAGAAAGTTAAAGAAATTAATCATGTAGAGAAGAGAATCTG
AAAATTTTACCAAGTTGAGGCACACTTTTTCTTTGGGGATGGATGGATGG
AAAGACCTTTTCTTAATCACAATGGCACGTCAAATAGACATTTTTCTAAT
CAGGGTGTCAATTTTAATAGTTAAAAACTGCAACTTCAAAGCAATGATGA
GAAAAAAATATTAGTCAAATAAATCTAATAAAATTAAATAAATACAAACT
TAAAAAATTCACTACACGCTCTTTCTACAAACAATATCACTTAAACAAAT
GTACCTACAAGATAATGCTGAAAGACATGAGTGAAAAAAGGTCTAATTAA
TGAAAGGCATTTTCCTCGTCTAAAAGTTCATGACATTGCTTGACTATAGA
CCTTTTTGCAATATGTCATTTATGTTGAATATAGAAACTCCAACCCAGTT
CAAACATAAATTATAACTTTGATATTTTGTTGTTTCCCTTCCATTCATTG
AATCAAGAAGCTATCAGGATTTATGCTGAAGTTTTTCAATTATTTATTAT
TACATCAGATGACTTTGTGATAAGGGAAAGGTCTAACTGGATAGTGTCTA
CAAATCAGAAAGTTTCAACATGACTTGTTTGCATTCTGATCTAGCCAGCT
AACATGATTTTGAAATCCAAACCAAAAGATTCTGCTGTTTGGAGGCCATT
GCAGTTACCCCTTGCTTATTAAAGCTATCTCAAGTGATGGTACTAATTTT
AAAGCCAATAGGTAATAGAAACATTATTCCATGTATCATTTACTAAAAAA
AATCCTTTCTGACTTTCTTTAGTGTATCATCAAATCATATGTACATTGGC
TTCAAGACAGTGATTTCAGTGCTACTTGTTCTTTATGCCTGGAGAGTATC
GATAAAGGAGAAGTGATAAGGCTAACATGTTACGGTATGTATGTTTCTCC
TCATTATGTTCTTTTCTGTTCTATTACAATTTGAAAGTATTAAAAAGATG
AAGTTAGTGTTTTCTTTCTTTATGTATTTTTGTACATGGCTTTGCTCTTC
ATTGAGCAATTTGTAACATCAATTACAAATTAAACTAAAAAATTTTTGAA
AAAGAAAACTATTTGAATCTCTTCAAATCTTTAATTTAATGTTTTTTCTC
ATCAAAAGATTTGTTTCATTGGGATTGCTTCAATGCTTGGGCATTAAAAC
TTCCAGAGTCAACTCCAAAGACTGGCTACACATGTCCTGACTGCAAAGTA
AGGAAACTTCACGATCAATATTTTATAGCAAACTCCATTTATCTGCTCAA
ATAATCAAGATTAATTTAAGATTTGAAGAGGCCAAACGTCATTATTTTCA
AAGCAATATTTTGTTTATGGTTTCCCATAAGAAATACTTTTCAAACAGTC
AAATATAAACATAGTACATCCAAATACACTTGCTATCCTTTTTTTTCAGG
CACAAATCTTTCCACCTAAAGCATTAGTTTCACCAATAGCAGACGTTTTG
CGTCAAAAATTTTCAACAGTTGGATGGGGACGAAAAGGGTTAGGTCTACC
ACTACAAACTCATGAGCAGGTATTTTGATTAAAATCTATGCTATGTCTTT
GATATTTTGCTTGTTTCTGTTGTAAGAATTTTAGTTTTTTTACCGTGGGG
AATCTAGAAATAGACATTGATTTTTCTGTTTGACCAAAATTCAATCCCAT
AACCCTTTGCGTTTATTACACACAAAGAAAAAGTAATAACTTTCACAACT
TTTGAATTAAGACGAAAAGGATTGTGGGATTGAATTTTGGTCAAATTAGA
GAAGTAATAATCATGACATTTGCATTTAACAAAGGGCTATTATGTAAGTC
AAAAGGATTTGAAGAATTGAAAGAAAAACTAAATTAGCAAATCAAAAAAA
GTGATCTTCATCAATCTTCTTTAAAAATCATTTTCTGTATCTCAAGCCCA
CATCTCATCCTTGTTATGCTCAAGGCTCAAAATAACGATTTCAAGTGGGT
TGCTCGGACAAAATGTCCGATCAGGGTTGCTTTAGCTTGAAAATTATGAT
TTTTGGGTCGGACATGAAGCTATTTGGGTCGGACAATGTCCGATGTCCGA
CCGTTATTTCGAGCCCTGTATGCTTAAAGATATTTTCTTTTTTTTCTTCC
AGACGTCACCAAGGCCCACCACTCCAGGTATGAATTATCCTGTGTTTTGA
TTGTAATATCTGTAGTTCTTGATTTTAACAATATTCAATTTCATAAAGGA
TGTGATAGTGTTGTCTGCCTTCTTGTCTTGTCTGGTTTTTGGAGATATTT
GTCATTTTTATTATAATTATGTCAAGCTTTTATGATATATTTCCTGGTTG
AACATACTAGAATTTTTATAGATTTACTATCGTTTAGCTCCAAAAGTTTC
CTTAATTCCTAAGATTTCCATATATTTTTCCTAAGGGGAAAATCCAAAGT
TCTAATTTGGCTTTTGAGCTCCACATCACACCTTTCGTATTTGGTATGAA
AAGAAAGGGGTGATGTTTTTAATTGATTCCAATTCCAAAACCCTTAATAA
TACTTTCTAACATACACATTTCCTAATTATTTCAGTATTAAGTGATACGC
ATCAACAAGTATCATCCACACCTAAATCAAGTTACAAACCGTTAGCGTCT
GTCACTCCTTTCGTACCTCTATCCAACAAACAGCAACAGAAAATCGAACA
ACATAATGCATATCAAACACAACAAAACCTTTCAAATACACAACAACATC
AACAAACACATGATACAAAACCATCGCAACAATCATCTATGTTTAGTAGA
GATAAATACCCGACTGAAGGTATACAACATTTATGCATTGCATCATTCAT
TTTCACATTAGATAAGGCTGTTTGTCGTCAAAATTTCCGTCAGAGTGTCC
AGTTGTTGACTTCTAAAATCAAAATCGTGTTTTTGGTTTAATTTAGATTT
TCGAACGTTTAAAATTTGAAACAAATTCTATTTTGAGAAATCCCTCAAAA
GGGACGTTATTAACGGACGCACATTACTTTTGCTTCAATTAATCCCATTG
CCTAGGAAATGGAGTAGCGACCAGTGTTTATTAGATTAATTCATATTTAT
TCGATGGATTCATATTCGTTTTCACATTTTTCTATTCACTCGTAGGCACG
TTATCACGGAAACAAGCACCAACGACACGATACGAAGAATCTAAAATCAA
TTTATCGTTTGATCACGATGAAAATAAATATAAACGAAAAGGTTTCATGC
ATTGGCTCTCTAACATGATGAGGTGAATTATGTTTTTAGTATTTTTTTAC
AATTCCAATTTGTTAATTACAAAATGTATTTCTTTGAAGGCTAGGTTTCT
GCTTTGCCTCTGATCAAATAGTGTAAGTGAAACTGTCTGACTCGATTCTA
TGATTTATTTCAAACAAAAAACTGATAAGTTTCTATTGATCTCCGTCTTT
GATATTGGATTTTTGTTCAAAGAGACTTTTAAGGTTTTGCCAATCGTAGG
AAACCATTGCAACAATATTTTTGGATCTAAGAGATAAGGTCATTTTGATG
GTGGCGTGAAGGTAATGAAAATTTTTTTCTCCNTTTTTGGATCTAAGAGA
TAAGGTCATTTTGATGGTGGCGTGAAGGTAATGAAAATTTTTTTTCTCGT
GTCTTTCAGGTTATGGAAAAAGCCAGGCGAAATAAAGAAAGAAGCCAATA
TGACGTATAAACGAGTATTCATCGCTTTAGTGTTATTTACATTGATCTTT
ATGACTGTTATTTATTTCATGTCTGCCCTGGGTGGAAGGGTCGCTGAAAA
TGACCCATTGTTAGATCCAGACCTCAACAGATTTGTAAAAGTTGGTAATA
ATCATATTGGTGGCGTAGGCGGTCAAGATTTAACGATGTGAAATGGTTGT
TTTTGATTTCTTGGATTTTTGTTACCCTGATAGAGCACTTCGTTGAGCGG
TTCATTTCATGACCAAATATAGCCGATTCGCACACGCACGCAAATGAAAC
GTCACCATTTTCTGGTGTGGAAATTTAAATGGAATCTGGAAATATAATTT
GATTAAAAACATTGTTTTACAGACGTGTTCGATTGGCTTGAAAAGACGAT
ATTATAAAGGATAGGATTATTTGATTAAAGTTTACAACTTAAAGGAAGAA
ATTTTGGTGGGTACTCTTAGGTTCCAAATATAAAGGTTCTATATATAGGT
TATATATAGGTTCCTG

Coding sequence (CDS) from alignment at sc0000128:316653..322768-

>TCONS_00011490 ID=TCONS_00011490|Name=TCONS_00011490|organism=Clytia hemisphaerica|type=CDS|length=8832bp|location=Sequence derived from alignment at sc0000128:316653..322768- (Clytia hemisphaerica)
GTTATGGAAAAAGCCAGGCGAAATAAAGAAAGAAGCCAATATGACGTATA
AACGAGTATTCATCGCTTTAGTGTTATTTACATTGATCTTTATGACTGTT
ATTTATTTCATGTCTGCCCTGGGTGGAAGGGTCGCTGAAAATGACCCATT
GTTAGATCCAGACCTCAACAGATTTGTAAAAGTTGGTAATAATCATATTG
GTGGCGTAGGCGGTCAAGATTTAACGATGTGAGCACGTTATCACGGAAAC
AAGCACCAACGACACGATACGAAGAATCTAAAATCAATTTATCGTTTGAT
CACGATGAAAATAAATATAAACGAAAAGGTTTCATGCATTGGCTCTCTAA
CATGATGAGTATTAAGTGATACGCATCAACAAGTATCATCCACACCTAAA
TCAAGTTACAAACCGTTAGCGTCTGTCACTCCTTTCGTACCTCTATCCAA
CAAACAGCAACAGAAAATCGAACAACATAATGCATATCAAACACAACAAA
ACCTTTCAAATACACAACAACATCAACAAACACATGATACAAAACCATCG
CAACAATCATCTATGTTTAGTAGAGATAAATACCCGACTGAAGACGTCAC
CAAGGCCCACCACTCCAGGCACAAATCTTTCCACCTAAAGCATTAGTTTC
ACCAATAGCAGACGTTTTGCGTCAAAAATTTTCAACAGTTGGATGGGGAC
GAAAAGGGTTAGGTCTACCACTACAAACTCATGAGCAGATTTGTTTCATT
GGGATTGCTTCAATGCTTGGGCATTAAAACTTCCAGAGTCAACTCCAAAG
ACTGGCTACACATGTCCTGACTGCAAATGTATCATCAAATCATATGTACA
TTGGCTTCAAGACAGTGATTTCAGTGCTACTTGTTCTTTATGCCTGGAGA
GTATCGATAAAGGAGAAGTGATAAGGCTAACATGTTACGATGGGTGTTTG
CAAGTGTAANTTTTACCATTCATTCATTCATCACCTTGTGAAATCAAAGA
AGATGGGTGTTTGCAAGTGTAAACAAAGAAATGTTACGAATCAATTTTGT
TATGGATGTCGTGTGAATGTTTGTGAATCCTGCATGATTAAAGATCATCA
AAGGGTTATGGAAAAAGCCAGGCGAAATAAAGAAAGAAGCCAATATGACG
TATAAACGAGTATTCATCGCTTTAGTGTTATTTACATTGATCTTTATGAC
TGTTATTTATTTCATGTCTGCCCTGGGTGGAAGGGTCGCTGAAAATGACC
CATTGTTAGATCCAGACCTCAACAGATTTGTAAAAGTTGGTAATAATCAT
ATTGGTGGCGTAGGCGGTCAAGATTTAACGATGTGAGCACGTTATCACGG
AAACAAGCACCAACGACACGATACGAAGAATCTAAAATCAATTTATCGTT
TGATCACGATGAAAATAAATATAAACGAAAAGGTTTCATGCATTGGCTCT
CTAACATGATGAGTATTAAGTGATACGCATCAACAAGTATCATCCACACC
TAAATCAAGTTACAAACCGTTAGCGTCTGTCACTCCTTTCGTACCTCTAT
CCAACAAACAGCAACAGAAAATCGAACAACATAATGCATATCAAACACAA
CAAAACCTTTCAAATACACAACAACATCAACAAACACATGATACAAAACC
ATCGCAACAATCATCTATGTTTAGTAGAGATAAATACCCGACTGAAGACG
TCACCAAGGCCCACCACTCCAGGCACAAATCTTTCCACCTAAAGCATTAG
TTTCACCAATAGCAGACGTTTTGCGTCAAAAATTTTCAACAGTTGGATGG
GGACGAAAAGGGTTAGGTCTACCACTACAAACTCATGAGCAGATTTGTTT
CATTGGGATTGCTTCAATGCTTGGGCATTAAAACTTCCAGAGTCAACTCC
AAAGACTGGCTACACATGTCCTGACTGCAAATGTATCATCAAATCATATG
TACATTGGCTTCAAGACAGTGATTTCAGTGCTACTTGTTCTTTATGCCTG
GAGAGTATCGATAAAGGAGAAGTGATAAGGCTAACATGTTACGATGGGTG
TTTGCAAGTGTAANTTTTACCATTCATTCATTCATCACCTTGTGAAATCA
AAGAAGATGGGTGTTTGCAAGTGTAAACAAAGAAATGTTACGAATCAATT
TTGTTATGGATGTCGTGTGAATGTTTGTGAATCCTGCATGATTAAAGATC
ATCAAAGGGTTATGGAAAAAGCCAGGCGAAATAAAGAAAGAAGCCAATAT
GACGTATAAACGAGTATTCATCGCTTTAGTGTTATTTACATTGATCTTTA
TGACTGTTATTTATTTCATGTCTGCCCTGGGTGGAAGGGTCGCTGAAAAT
GACCCATTGTTAGATCCAGACCTCAACAGATTTGTAAAAGTTGGTAATAA
TCATATTGGTGGCGTAGGCGGTCAAGATTTAACGATGTGAGCACGTTATC
ACGGAAACAAGCACCAACGACACGATACGAAGAATCTAAAATCAATTTAT
CGTTTGATCACGATGAAAATAAATATAAACGAAAAGGTTTCATGCATTGG
CTCTCTAACATGATGAGTATTAAGTGATACGCATCAACAAGTATCATCCA
CACCTAAATCAAGTTACAAACCGTTAGCGTCTGTCACTCCTTTCGTACCT
CTATCCAACAAACAGCAACAGAAAATCGAACAACATAATGCATATCAAAC
ACAACAAAACCTTTCAAATACACAACAACATCAACAAACACATGATACAA
AACCATCGCAACAATCATCTATGTTTAGTAGAGATAAATACCCGACTGAA
GACGTCACCAAGGCCCACCACTCCAGGCACAAATCTTTCCACCTAAAGCA
TTAGTTTCACCAATAGCAGACGTTTTGCGTCAAAAATTTTCAACAGTTGG
ATGGGGACGAAAAGGGTTAGGTCTACCACTACAAACTCATGAGCAGATTT
GTTTCATTGGGATTGCTTCAATGCTTGGGCATTAAAACTTCCAGAGTCAA
CTCCAAAGACTGGCTACACATGTCCTGACTGCAAATGTATCATCAAATCA
TATGTACATTGGCTTCAAGACAGTGATTTCAGTGCTACTTGTTCTTTATG
CCTGGAGAGTATCGATAAAGGAGAAGTGATAAGGCTAACATGTTACGATG
GGTGTTTGCAAGTGTAANTTTTACCATTCATTCATTCATCACCTTGTGAA
ATCAAAGAAGATGGGTGTTTGCAAGTGTAAACAAAGAAATGTTACGAATC
AATTTTGTTATGGATGTCGTGTGAATGTTTGTGAATCCTGCATGATTAAA
GATCATCAAAGGGTTATGGAAAAAGCCAGGCGAAATAAAGAAAGAAGCCA
ATATGACGTATAAACGAGTATTCATCGCTTTAGTGTTATTTACATTGATC
TTTATGACTGTTATTTATTTCATGTCTGCCCTGGGTGGAAGGGTCGCTGA
AAATGACCCATTGTTAGATCCAGACCTCAACAGATTTGTAAAAGTTGGTA
ATAATCATATTGGTGGCGTAGGCGGTCAAGATTTAACGATGTGAGCACGT
TATCACGGAAACAAGCACCAACGACACGATACGAAGAATCTAAAATCAAT
TTATCGTTTGATCACGATGAAAATAAATATAAACGAAAAGGTTTCATGCA
TTGGCTCTCTAACATGATGAGTATTAAGTGATACGCATCAACAAGTATCA
TCCACACCTAAATCAAGTTACAAACCGTTAGCGTCTGTCACTCCTTTCGT
ACCTCTATCCAACAAACAGCAACAGAAAATCGAACAACATAATGCATATC
AAACACAACAAAACCTTTCAAATACACAACAACATCAACAAACACATGAT
ACAAAACCATCGCAACAATCATCTATGTTTAGTAGAGATAAATACCCGAC
TGAAGACGTCACCAAGGCCCACCACTCCAGGCACAAATCTTTCCACCTAA
AGCATTAGTTTCACCAATAGCAGACGTTTTGCGTCAAAAATTTTCAACAG
TTGGATGGGGACGAAAAGGGTTAGGTCTACCACTACAAACTCATGAGCAG
ATTTGTTTCATTGGGATTGCTTCAATGCTTGGGCATTAAAACTTCCAGAG
TCAACTCCAAAGACTGGCTACACATGTCCTGACTGCAAATGTATCATCAA
ATCATATGTACATTGGCTTCAAGACAGTGATTTCAGTGCTACTTGTTCTT
TATGCCTGGAGAGTATCGATAAAGGAGAAGTGATAAGGCTAACATGTTAC
GATGGGTGTTTGCAAGTGTAANTTTTACCATTCATTCATTCATCACCTTG
TGAAATCAAAGAAGATGGGTGTTTGCAAGTGTAAACAAAGAAATGTTACG
AATCAATTTTGTTATGGATGTCGTGTGAATGTTTGTGAATCCTGCATGAT
TAAAGATCATCAAAGGGTTATGGAAAAAGCCAGGCGAAATAAAGAAAGAA
GCCAATATGACGTATAAACGAGTATTCATCGCTTTAGTGTTATTTACATT
GATCTTTATGACTGTTATTTATTTCATGTCTGCCCTGGGTGGAAGGGTCG
CTGAAAATGACCCATTGTTAGATCCAGACCTCAACAGATTTGTAAAAGTT
GGTAATAATCATATTGGTGGCGTAGGCGGTCAAGATTTAACGATGTGAGC
ACGTTATCACGGAAACAAGCACCAACGACACGATACGAAGAATCTAAAAT
CAATTTATCGTTTGATCACGATGAAAATAAATATAAACGAAAAGGTTTCA
TGCATTGGCTCTCTAACATGATGAGTATTAAGTGATACGCATCAACAAGT
ATCATCCACACCTAAATCAAGTTACAAACCGTTAGCGTCTGTCACTCCTT
TCGTACCTCTATCCAACAAACAGCAACAGAAAATCGAACAACATAATGCA
TATCAAACACAACAAAACCTTTCAAATACACAACAACATCAACAAACACA
TGATACAAAACCATCGCAACAATCATCTATGTTTAGTAGAGATAAATACC
CGACTGAAGACGTCACCAAGGCCCACCACTCCAGGCACAAATCTTTCCAC
CTAAAGCATTAGTTTCACCAATAGCAGACGTTTTGCGTCAAAAATTTTCA
ACAGTTGGATGGGGACGAAAAGGGTTAGGTCTACCACTACAAACTCATGA
GCAGATTTGTTTCATTGGGATTGCTTCAATGCTTGGGCATTAAAACTTCC
AGAGTCAACTCCAAAGACTGGCTACACATGTCCTGACTGCAAATGTATCA
TCAAATCATATGTACATTGGCTTCAAGACAGTGATTTCAGTGCTACTTGT
TCTTTATGCCTGGAGAGTATCGATAAAGGAGAAGTGATAAGGCTAACATG
TTACGATGGGTGTTTGCAAGTGTAANTTTTACCATTCATTCATTCATCAC
CTTGTGAAATCAAAGAAGATGGGTGTTTGCAAGTGTAAACAAAGAAATGT
TACGAATCAATTTTGTTATGGATGTCGTGTGAATGTTTGTGAATCCTGCA
TGATTAAAGATCATCAAAGGGTTATGGAAAAAGCCAGGCGAAATAAAGAA
AGAAGCCAATATGACGTATAAACGAGTATTCATCGCTTTAGTGTTATTTA
CATTGATCTTTATGACTGTTATTTATTTCATGTCTGCCCTGGGTGGAAGG
GTCGCTGAAAATGACCCATTGTTAGATCCAGACCTCAACAGATTTGTAAA
AGTTGGTAATAATCATATTGGTGGCGTAGGCGGTCAAGATTTAACGATGT
GAGCACGTTATCACGGAAACAAGCACCAACGACACGATACGAAGAATCTA
AAATCAATTTATCGTTTGATCACGATGAAAATAAATATAAACGAAAAGGT
TTCATGCATTGGCTCTCTAACATGATGAGTATTAAGTGATACGCATCAAC
AAGTATCATCCACACCTAAATCAAGTTACAAACCGTTAGCGTCTGTCACT
CCTTTCGTACCTCTATCCAACAAACAGCAACAGAAAATCGAACAACATAA
TGCATATCAAACACAACAAAACCTTTCAAATACACAACAACATCAACAAA
CACATGATACAAAACCATCGCAACAATCATCTATGTTTAGTAGAGATAAA
TACCCGACTGAAGACGTCACCAAGGCCCACCACTCCAGGCACAAATCTTT
CCACCTAAAGCATTAGTTTCACCAATAGCAGACGTTTTGCGTCAAAAATT
TTCAACAGTTGGATGGGGACGAAAAGGGTTAGGTCTACCACTACAAACTC
ATGAGCAGATTTGTTTCATTGGGATTGCTTCAATGCTTGGGCATTAAAAC
TTCCAGAGTCAACTCCAAAGACTGGCTACACATGTCCTGACTGCAAATGT
ATCATCAAATCATATGTACATTGGCTTCAAGACAGTGATTTCAGTGCTAC
TTGTTCTTTATGCCTGGAGAGTATCGATAAAGGAGAAGTGATAAGGCTAA
CATGTTACGATGGGTGTTTGCAAGTGTAANTTTTACCATTCATTCATTCA
TCACCTTGTGAAATCAAAGAAGATGGGTGTTTGCAAGTGTAAACAAAGAA
ATGTTACGAATCAATTTTGTTATGGATGTCGTGTGAATGTTTGTGAATCC
TGCATGATTAAAGATCATCAAAGGGTTATGGAAAAAGCCAGGCGAAATAA
AGAAAGAAGCCAATATGACGTATAAACGAGTATTCATCGCTTTAGTGTTA
TTTACATTGATCTTTATGACTGTTATTTATTTCATGTCTGCCCTGGGTGG
AAGGGTCGCTGAAAATGACCCATTGTTAGATCCAGACCTCAACAGATTTG
TAAAAGTTGGTAATAATCATATTGGTGGCGTAGGCGGTCAAGATTTAACG
ATGTGAGCACGTTATCACGGAAACAAGCACCAACGACACGATACGAAGAA
TCTAAAATCAATTTATCGTTTGATCACGATGAAAATAAATATAAACGAAA
AGGTTTCATGCATTGGCTCTCTAACATGATGAGTATTAAGTGATACGCAT
CAACAAGTATCATCCACACCTAAATCAAGTTACAAACCGTTAGCGTCTGT
CACTCCTTTCGTACCTCTATCCAACAAACAGCAACAGAAAATCGAACAAC
ATAATGCATATCAAACACAACAAAACCTTTCAAATACACAACAACATCAA
CAAACACATGATACAAAACCATCGCAACAATCATCTATGTTTAGTAGAGA
TAAATACCCGACTGAAGACGTCACCAAGGCCCACCACTCCAGGCACAAAT
CTTTCCACCTAAAGCATTAGTTTCACCAATAGCAGACGTTTTGCGTCAAA
AATTTTCAACAGTTGGATGGGGACGAAAAGGGTTAGGTCTACCACTACAA
ACTCATGAGCAGATTTGTTTCATTGGGATTGCTTCAATGCTTGGGCATTA
AAACTTCCAGAGTCAACTCCAAAGACTGGCTACACATGTCCTGACTGCAA
ATGTATCATCAAATCATATGTACATTGGCTTCAAGACAGTGATTTCAGTG
CTACTTGTTCTTTATGCCTGGAGAGTATCGATAAAGGAGAAGTGATAAGG
CTAACATGTTACGATGGGTGTTTGCAAGTGTAANTTTTACCATTCATTCA
TTCATCACCTTGTGAAATCAAAGAAGATGGGTGTTTGCAAGTGTAAACAA
AGAAATGTTACGAATCAATTTTGTTATGGATGTCGTGTGAATGTTTGTGA
ATCCTGCATGATTAAAGATCATCAAAGGGTTATGGAAAAAGCCAGGCGAA
ATAAAGAAAGAAGCCAATATGACGTATAAACGAGTATTCATCGCTTTAGT
GTTATTTACATTGATCTTTATGACTGTTATTTATTTCATGTCTGCCCTGG
GTGGAAGGGTCGCTGAAAATGACCCATTGTTAGATCCAGACCTCAACAGA
TTTGTAAAAGTTGGTAATAATCATATTGGTGGCGTAGGCGGTCAAGATTT
AACGATGTGAGCACGTTATCACGGAAACAAGCACCAACGACACGATACGA
AGAATCTAAAATCAATTTATCGTTTGATCACGATGAAAATAAATATAAAC
GAAAAGGTTTCATGCATTGGCTCTCTAACATGATGAGTATTAAGTGATAC
GCATCAACAAGTATCATCCACACCTAAATCAAGTTACAAACCGTTAGCGT
CTGTCACTCCTTTCGTACCTCTATCCAACAAACAGCAACAGAAAATCGAA
CAACATAATGCATATCAAACACAACAAAACCTTTCAAATACACAACAACA
TCAACAAACACATGATACAAAACCATCGCAACAATCATCTATGTTTAGTA
GAGATAAATACCCGACTGAAGACGTCACCAAGGCCCACCACTCCAGGCAC
AAATCTTTCCACCTAAAGCATTAGTTTCACCAATAGCAGACGTTTTGCGT
CAAAAATTTTCAACAGTTGGATGGGGACGAAAAGGGTTAGGTCTACCACT
ACAAACTCATGAGCAGATTTGTTTCATTGGGATTGCTTCAATGCTTGGGC
ATTAAAACTTCCAGAGTCAACTCCAAAGACTGGCTACACATGTCCTGACT
GCAAATGTATCATCAAATCATATGTACATTGGCTTCAAGACAGTGATTTC
AGTGCTACTTGTTCTTTATGCCTGGAGAGTATCGATAAAGGAGAAGTGAT
AAGGCTAACATGTTACGATGGGTGTTTGCAAGTGTAANTTTTACCATTCA
TTCATTCATCACCTTGTGAAATCAAAGAAGATGGGTGTTTGCAAGTGTAA
ACAAAGAAATGTTACGAATCAATTTTGTTATGGATGTCGTGTGAATGTTT
GTGAATCCTGCATGATTAAAGATCATCAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006435XLOC_006435Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011490-exon-sc0000128-1575043694:322366..322768TCONS_00011490-exon-sc0000128-1575043694:322366..322768Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1575043694:319935..320046TCONS_00011490-exon-sc0000128-1575043694:319935..320046Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1575043694:319622..319710TCONS_00011490-exon-sc0000128-1575043694:319622..319710Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1575043694:319300..319419TCONS_00011490-exon-sc0000128-1575043694:319300..319419Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1575043694:318692..318716TCONS_00011490-exon-sc0000128-1575043694:318692..318716Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1575043694:318050..318283TCONS_00011490-exon-sc0000128-1575043694:318050..318283Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1575043694:317597..317723TCONS_00011490-exon-sc0000128-1575043694:317597..317723Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1575043694:316653..317209TCONS_00011490-exon-sc0000128-1575043694:316653..317209Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1510915933:322366..322768TCONS_00011490-exon-sc0000128-1510915933:322366..322768Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1510915933:319935..320046TCONS_00011490-exon-sc0000128-1510915933:319935..320046Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1510915933:319622..319710TCONS_00011490-exon-sc0000128-1510915933:319622..319710Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1510915933:319300..319419TCONS_00011490-exon-sc0000128-1510915933:319300..319419Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1510915933:318692..318716TCONS_00011490-exon-sc0000128-1510915933:318692..318716Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1510915933:318050..318283TCONS_00011490-exon-sc0000128-1510915933:318050..318283Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1510915933:317597..317723TCONS_00011490-exon-sc0000128-1510915933:317597..317723Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1510915933:316653..317209TCONS_00011490-exon-sc0000128-1510915933:316653..317209Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1491911889:322366..322768TCONS_00011490-exon-sc0000128-1491911889:322366..322768Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1491911889:319935..320046TCONS_00011490-exon-sc0000128-1491911889:319935..320046Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1491911889:319622..319710TCONS_00011490-exon-sc0000128-1491911889:319622..319710Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1491911889:319300..319419TCONS_00011490-exon-sc0000128-1491911889:319300..319419Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1491911889:318692..318716TCONS_00011490-exon-sc0000128-1491911889:318692..318716Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1491911889:318050..318283TCONS_00011490-exon-sc0000128-1491911889:318050..318283Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1491911889:317597..317723TCONS_00011490-exon-sc0000128-1491911889:317597..317723Clytia hemisphaericaexon
TCONS_00011490-exon-sc0000128-1491911889:316653..317209TCONS_00011490-exon-sc0000128-1491911889:316653..317209Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011490-proteinTCONS_00011490-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000128supercontigsc0000128:316653..322768 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.9338	18.4563	8.14936	6.59436	27.5927	21.3245	33.1775	34.3396	17.3214	22.1756	18.9611	14.5089	12.1007	11.7622	11.2602	14.341	15.5332	13.2052	9.33186	13.1744	14.6021	15.3955	17.8859	19.994	16.3659	18.8724	9.4651	6.54295	14.764	15.3895
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Blast
[Close]
BLAST of TCONS_00011490 vs. Swiss-Prot (Human)
Match: ZFPL1 (Zinc finger protein-like 1 OS=Homo sapiens GN=ZFPL1 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.391e-58
Identity = 122/340 (35.88%), Postives = 169/340 (49.71%), Query Frame = 2 
Query:  302 MGVCKCKQRNVTNQFCYGCRVNVCESCMIKDHQRCIIKSYVHWLQDSDFSATCSLCLESIDKGEVIRLTCYDLFHWDCFNAWALKLPESTPKTGYTCPDCKAQIFPPKALVSPIADVLRQKFSTVGWGRKGLGLPLQTHEQTSPRPTTPVLSD----THQQVSSTPKSSYKPLASVTPF----VPLSNKQQQKIEQHNAYXXXXXXXXXXXXXXXXDTKPSQQSSMFSRDKYPTEGTLSRKQAPTTRYEESKINLSFDHDENKYKRKGFMHWLSNMMRLWKKPGEIKKEANMTYKRVFIALVLFTLIFMTVIYFMSALGGRVAENDPLLDPDLNRFVKVG 1297
            MG+CKC +R VTN FC+  RVNVCE C++ +H +CI++SY+ WLQDSD++  C LC   +   E  RL CYDLFHW C N  A +LP +T   GY CP C   IFPP  L  P+A  LR+K +TV W R GLGLPL   E  SP P     SD    +    SSTP       AS  P      P       + EQH                                   P   T + ++   TR ++    L  D D++KY+R+  + WL+ ++R   + G  K+   +  +   + L+L  L F+ ++  MS LG   A++DP LDP +N  ++VG
Sbjct:    1 MGLCKCPKRKVTNLFCFEHRVNVCEHCLVANHAKCIVQSYLQWLQDSDYNPNCRLCNIPLASRETTRLVCYDLFHWACLNERAAQLPRNTAPAGYQCPSCNGPIFPPTNLAGPVASALREKLATVNWARAGLGLPL-IDEVVSPEPEPLNTSDFSDWSSFNASSTPGPEEVDSASAAPAFYSQAPRPPASPGRPEQHTVIHMGN----------------------------PEPLTHAPRKVYDTRDDDRTPGLHGDCDDDKYRRRPALGWLARLLR--SRAGSRKRPLTLLQR-AGLLLLLGLLGFLALLALMSRLGRAAADSDPNLDPLMNPHIRVG 308
The following BLAST results are available for this feature:
BLAST of TCONS_00011490 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZFPL11.391e-5835.88Zinc finger protein-like 1 OS=Homo sapiens GN=ZFPL... [more]
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