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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011465 ID=TCONS_00011465|Name=TCONS_00011465|organism=Clytia hemisphaerica|type=transcript|length=281bp
ATGGACAAAACGATCAATTCACAGAGCAGTACCACAAGCGATACAGCAAC
AGCTATGAATACCATGTTGTTTGTGCAAGGACAAGAATTCGCTGTTGTTG
GGACATtgttaattttgatgaagatcaTTGCGGAATATTGTCAATGCATT
GATGACGTACCAATGTTGGTCACTGACGTCATGACACGTTTGTGCGAATT
ACTCAAAatattcaatTCGCGCGCATGTCAGTTAGTGTTGGGCGCAGGTG
CTCTACAGACAGTTGGCTTGAAGACCATCAC Run BLAST on NCBI transcript from alignment at sc0000128:4507..21979- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011465 ID=TCONS_00011465|Name=TCONS_00011465|organism=Clytia hemisphaerica|type=transcript|length=17473bp|location=Sequence derived from alignment at sc0000128:4507..21979- (Clytia hemisphaerica)
ATGGACAAAACGATCAATTCACAGAGCAGTACCACAAGCGATACAGCAAC
AGCTATGAATACCATGTTGTTTGTGCAAGGACAAGAATTCGCTGTTGTTG
GGTAAGTTGTCTACTTGAGTGTTTTTAACGGACGGAGATCAACAATATTA
TAGATTTAATCACAGTCCATTCTCAACTCAAAGGCAATTTTTATGAGTGA
CCCAATTGATTAATTTTGTTGTTTTGATCTCAGCAACTTTTATTAGCCAT
TCTATTCCGGCTTACGCTTAAACAGTTTAAAGTTTTCATATTTGACAGAT
TTTTTGATGTGAAAATGGTAGCTGAAATTTATAATGACAACAGGGGAATG
TAAATCAAATAGTAGAATTCATATTGTGTGGGTGGCTCACTTTTTTGTCG
AAATTTGAAAATGAGCAAAGGATATTTTGTGAGGTTAAGTACCGTGGATT
ATTCACGAACACGAACGGGAAATATTAAAGGCTTTTTTAAATTCAAAAAT
TGATTGGTTGAACTACACTAGTGTCTTTCATGTTCCATTCGCGCATGAAT
TATCTACGGTACTAAACCTCACTAATGGTATGCGAGATACGAGCGGGATT
TTTGGAAAAGCCTTTTAAATTTATATTTTAGCGATTGGTTTATGGGGTTT
AAGGAAGCTATCAATGGCTAGATTTAAGCATTGATTGGCTGGTAGATTTA
TATTATTGCTTATTTATTTAACGAACAGCTTTAGTAGTCGAAGGTTAAAA
CAAATCAATTTGAAAACAAATTCTGATGTTGTTAAATGCGGTTGTGCGCA
GGGCAGATAGACGTGAACGGATCTTATTTATCACTCTCTTATATTATGTT
TTAGGACATTGTTAATTTTGATGAAGATCATTGCGGAATATTGTCAATGC
ATTGATGACGTACCAATGTTGGTCACTGACGTCATGACACGTTTGTGCGA
ATTACTCAAAGTAGGTCTATTTCTCCTTCATAGCTATGCTAATTTAACGA
GCAGTACAATTCTTATGTTTATCTCAGATCAAGACTTCAAAATCAAAAAT
TTAAGACTTTAAAAGATTTAGAAAACACGAATTACATGTGTTGCCAGTCG
ACTTGTGCATCAATGCCGAAAACGGCGTTGGTCAGCTTTTTGGCACGAAA
AGTGATGAAATACAGCATTTGTCTGGGAAATTAAACAGTGTTGTATTTTT
TTTTAATTTGATTATGTTATATATCCAAGCAGTGACTTACGGGATTAGTA
GTTTTATGAATCGGCTTAGGCATTAGCTATATAGTTGATTTCTACTTGCA
AAGCTTTCGCTACCACAAAGCAAGGCAGTCCAAGATCTCACTCGTCAAAA
TTCTGTTGATGTTCTCCGATTCGATTTTCAAGGGGAATTGGATCTTCATC
GAAGAAGGGAGCCTATTTAGGAGAATTTCTTGTTGATGGCAACTTTTAAT
ATTATCGAATAACGGAGCGTATTGTGTCAAGTGTCAACTGTAAGTTTTTA
CAACAAAACTGCAGGATGTGGTCCTTATTATTCAATTCACTCATTTCGCC
TTCTCTTTTTTTTAGATATTCAATTCGCGCGCATGTCAGTTAGTGTTGGG
CGCAGGCGCCTTACAGACAGTTGGCTTGAAGACCATCACGGCGAAACACT
TGATGCTCGTTGCGCAATGTTTACAAGTTGTGATACTAAACATCAATACA
ATCAAAAATCACTTCGAATTGAGGCTGACACCCAAACAATACGTCATGTT
AACGCAATTTGATCAAATATTAAAGGTATTTTTAAACTTCAGTTGCTAGC
TAGAGTGTGAAAATGGTTGTTAGTCTGCCTGTCTGTTTATATGTGTCCCT
CTTCAACTTTTAACTTCAAATTAAATATTTAGGGACTGAGACGAAATTTT
TTTCCACAAGATTTCAAGTGTCGGATATCTTGAAAAATATATTTTTTTAA
TTAAGATTGTTTAAAAAAAAGAAGTTTAATACAAGAATTATATAGTCAAA
AGGATAATCTGATGGCTTAAGTAAAGATCTTCGGCATGAAAGTCCGAAGT
TTTTTGTCCTGGGCGAAACCTCAAAAAACGATTTCTTAAGTTTATATAGC
AAAGGTAAAATTTATTTGAAGAAATAGCAAGGTAAGCTAGACAGAGATTT
CAGTAGGTTAAGGATCTCAAATTACCCTCAGATCATCCCTCAAGTTTTAT
GTTATCTTATATTGAATCATCAAAATAAAAAATAACCCGTTTTTAAGAAC
TGAAGAAAACAATATGTGAACCTTAGATAAATCCTCCAATCTTTGGATTT
TATTGTCCATTTTAAAAGTAGTCACAGCCAATTTTACATTCGTCGACGGT
TGGAAAGGTTGAGCAACCTTCTCTTGAGCATGCGACGCACAAATTGAATG
TGTACCCCTCGACCTTCGGAAAGCAGCCAGATTGCCCGTTGCGCTCACAT
TTCGTTCGGCAGCTACCGACAGTGACTCCAAGGTGTCGCATTTTACACGC
ATGCGTACACGAAAACATTTGATTACATCCTTTTTGAAGGCTTGTATCTG
ATGCGCATGCGAATTCACTGCACGCATTTAAACATCCTGCCAAACGTTTA
TCTACAAGTGAAATGCAAACATTATGTAATGGTTCGAATGAGATGCAAAT
GGATCCTTATTATTCATTAAGCAATCGAATTTTAATTAGTTCTATTAATC
AAAGAATCAAAAAGGTAAAATATAGTTTACACAAATAATAATAATAGGTT
CGGGTTAACCCAGATATCGGGAATTATCGTTTGGCGATAGTTTAAATCTC
AAAAATAGATCTTCACTTGAGTTTTAATGCGGTAAATTGTGCCTTTAAAT
ACTTTCAAAGTCAGGTAATTATAGACCTTATCTATTTAGAACCAAATAAG
AGACTCTTCTTTTGACAGCTGAAAATATTTTCAAATTTTGATAAACGGGA
GGGGACTTATTACCTGGGGGTTGGAAATTGTACTTCAAAATAAGGTAATT
ATAGACTAAAATTTAGCTATTTAGAGCAAAATAAGGGACTTTTCTTTTGA
TAGCTGAAAATATAAATAAACGTGAAAGGGGGTCCTTAAATGGTCCGGGG
TGTGGAAGAAATCAAAAAACTAACAAGCGTAGGGCGTTTATTAGGCACAC
GGTAGGATAGGATGTACGTAGCCTTACCTTCTTGTGCTTGAGCACTGCAG
CTGGATGGACAAGCCTTATTCATGAATGAAGGGTTTTTGGTGCATTCTCC
ACGTCTTGCCCAATAACTGCATGACCAACGTTTATCACCATGAAAGCCTG
CCATAAAAAGAATGGTATTTATAGAAGTCTGATTTTAAAGCCGTTAATTT
CCAAGCTACTGCAAACGACTCTCTAAAAGTAAACATACAATTAAAGCTTT
TCAGGGCCAAAGGATTTGTTCTTTTCACATTCATCATGTGATTTTTAAGG
TGTGACAGGAACCTATTGTAACAAACCTAGCTTAAATCAACTGATATCAA
GCAAGTCTTCTTGACTTAAAAAAGTAACACTTTGTGGGAACGCTCCTTAT
ACAGTCGAGTCTCCATAACTCGAACACGGGCGGGAAACAGAAATTTGTTT
GAATTAAGGAAATTATTGAGTATTATGGAGTTATGAAGTAAGGCTTATAA
GGTTAACTGATGGGGCAAGAAAACTTGTTCGAGTTAAGGAGGTTCGAAGT
AAAGAGATTCTACTGCAATAACAACGAGATAATATTAGTAGCGTATGTAC
TTACAGACGTCACAGGCAGGAGCACAGCTGACAATCATGTAGGCTGGGTT
TTCATGGCATTCACCTCTTTTGGCCCAACTATCGCAATTATCGTTCGTGT
TCTTGCAGTTTATGTCGTTGCTGATGACCGCTCCACGTGCACTGTGAACT
GTAAACAAAATGTCAAGATTCAAAGTTAAAATCTTTCCATCCCGGTGCTA
CTTAAATGTGATTTTTATTTCGTTACGCTTAAGATTAACTTAATCTTTCC
CTCTATACCGGAGAAATTCACATCATCCCAAATTGATGCACGGGTTTAAA
GTTTGAACCATCTTTTGTATTCAAATGTCGAGAAAAAGTAAAATGTTACC
TGCTACTACAGCAATGCAAATGAGTGTTGTCAATCCCTTCATTTTGTTTT
GTGTGTGTTTTGTGTGTTTTTCTTCTTGTCAAGTCAATGGCTTCTTTTGC
TTTGAATGATTTCTCAGTGGTCCTTGTCCTTATTTATAGTCTTTTCTACA
GACCATTTTCTTCCTTTTTCGCCTATTCTTTCTTTTCGAAACTGAGAGGA
TGATTTTTTAATTTGCGTAATTTTATAGCTACTAATATTTCATTTTTTTA
ATTACAGGAAACTCATTAAAACGAATTCATAACTATATCGTATCGTATTT
TCGAATAGGTAATCTTAGACCACGGTCACATTCGCTCCGAAACGAATGAA
GTCATTCCATTGGTTAAACTCAAGTTTTACGTCACTTCTAACCAATGGAA
TGACTTAATTTCGTTTCGGAGCGAAACGGAACCGTAGTGTAGAAACGTGG
TCTTGTACTATAACTTATTTTATGGAAGCCCTAAGTATGCCGTCCAACCT
AGAGTTCTTTCTTGTAAGATTTACAGATCGAGATCAAAAGTCCCTTGAGC
TGTTTTTAAAGATTTTAAGAACAATAAATCTTTCCTGTCTAGAAATATTC
CAATGTTCTGGTGATAAAGTTCTTTTTTTTTTTTTTTTTTTTTTGCAATA
CATTAAAATAGTAAGATGCAATAACGATTACTTAGGACCTGAATACACAG
GTTGCAAAAGTCTGAAGACAAATCACGCTTTTTACTAGAAATTTTTATGT
GCTTGTTGTTATGTTACATGAGATTTATTTTTGATTGATTCGAATGTATT
GCCACTAAAAAAGTTATCAGCTGTTGAGTTGTAAAGCAAGTAACATGGAA
ATAGAATCGGGTGAACTTTTTCGAGTAATCACATGTTTTGATTGCATTGA
TATAATTTTGCAATCTGTGTATTCTCACTTAACGTATCCGATCATGACAA
GTGGCAGAGCTTGATAAAAAAATGTACAGTATTAGACTAGATAGACACCT
GACATTGCAAGCTCTTTACAAGTACAATACTATGGTTGAAAAATAGAAGC
TCAAAGTCAGGTCTTAGTCAAAAAAGCCATAATTTCACCTTTATATGGTA
ATGTACAATGGACTCTCGGTTAATCAAAGTAAATCGACTTTCCCCGTTTT
ATCCTCTTTTTAAGTGGTTTCTTATTCCCGTGGATAAGAGGCTATTTTCT
TCCAGTTATTCGAAGTCTAACAGTTTTATAAGTTATGGGGTATCAACTGG
TTGAAATCCCCATGATATTCCAAAGACAAAGAGAGAATGAGGCTAAGACA
GCCAGTTAAGTATTTGATTTGATTTTTATTTGATTTGGAAGGTCGTTGGA
CTAAAATCGAACGTGCACAACACACACTGGGCTAGAATTCATCCAACTTT
ATGGAGATTAAATTGGAGTAAAAATTGAAAACTTGTTTCAGGCTACAAAT
ATTGCATTTTTTGAAAAGTATGGAACGTGTGCAAAAATTTAGCCACTTCC
AACCATTTTCGACTGCTGCTCAAAAGATTTTAGCCTCATTTTGGCGAAAC
TTGTACCAAAGTCCCAAAATTTAAATTTTGAAGAAAAAAAACGCTTCCAG
GGGTTTGCTAAAGATAAATTGTACGACAAATCATTTTTTAAGTCTGCCCA
AAGACTTGCTCTAAGTTTATTATACCATTTACATGGAGTTAATCTGAACT
AGACAAAGATAGTGGTCAATATTGGGCTGATCCATTAAAAAAAAAGGTAA
AATTTCCAAAAAAACCCTTGGAAAAGTTCTTTTCATACTTAAAAGTGAGG
GTGGACGAACTAGAATCAGTCTTTTACCTACTAGAAATTTTAGAATAACT
TTTTACCCCCTTGGAAAAATGAAAACACACCCCCTTTTCTCAGATTATGA
TATGAAATGTTCGTCCACCCCCTGTATAGATATAAAATGNACTGTGTTCG
AATCGCAAGCTCTTCCAAGCAGGGTCTTAGGGAAATATGGTGATAGACTC
TCTACCTTCAATCACAATTGACGCTCTCTAATTTAACGTTCAAATATTCC
ATCCCCTCCATTATTCGATAATATTGAAAGTCACCGTCAACAAGAAACTC
TCATAAACGACGCACTTCTATTTGATACGTTTCCTTATTCAATGAAAATT
GAATTCCCCTTGAAAATCGAATTAAAGAGCGTCAAATGTACTATGGTGTC
TACGGGACCATGAAAACCTCGAAAAAGAACCATCCAATCTTGAAAATTTA
CTAATAGATGTTGTGGAAGAAAATCCACCTTGAAAATGGAGAAAAATATT
CATGGACTTCCTACTACTAGATGCTAAAAGAAGGAATATTTTATATTTTA
TATTTTATATAGGATTACAACAATCACAGACACGAACTATTATGTAAAAT
AACCAATCTGATGGAGGAAATATTCAATTCGTATTTATCACAGGTACTAA
CCGCTTTTTCTTCGTATTTGTTCAGCTACTCATCGACTACAATCCTGTAG
AACTGCTAAACTTTCAACTCCCGCTTAATCCCCACTCTGTCGCCACAAAC
GCCACAAACGAAGGCTAGTTCCGTTGAGGATTTTCAAGCCTTTTTAGTAC
CTTACAGTGCATTTCTTTCTTCTTTTTTTTGACCCTAGCATTGTGTTTCG
GAAAAAGACACCCTGTGTGACAACGGTTATTTTCGGTTAGTGTCGGTTAT
TTTGCCATGATAACTCTCCCCTGGAAATATCATTTAATTTGCGAATATTT
TATTGCAGTACGAATTAAAACCACCGATGCCTTCGAAAACCATGCGTAAT
ATTGTGGCGCAAGTCAAGAAGTTGCGTGAAACAATGGCCGCCATTTTGTC
CGAACAACAACTTGAAGTCCTGTTTCGTGACGTCAGAAGAAAATTTAAAG
ACTGTCTTGCGTCGAAGCTAGCGGATTTTGGTGTATCAAATGATGGAGGG
CCTCAGCACGGGTTCGTATATTTTCACTTGTATTTAATGCTTTATCCATC
GTTTAAGGCCCCCTTTAAGAGCAATATGATTTCAAGTGTATGGTCATACA
GTAACCATAAATGCCGAAAATCCCCGGTTGGAAGATGTTTTTAAAAAAAG
GCGTGATTAATCGAGAATGAAGGTCTGTTTCAAGGTCATATTTCCCTGTT
GGAGGAGACAATTTAAAAAAATCTTGAAAATCATATTATGTTTTCTTTAT
AGATTGGTTACTTCAGATGTCATTTTTTACTCGACCAGTTTGAATAAGTT
GACGGGTTTCAAAGACTTGGATCATAAATGTGACGGACTTTGGAATTCAA
TCAATGAGCTTAAAAAAACTCGCAAAAAACATGAACAACATTCATCGAAA
AGTCAGCAGCGGGCTTCATCAGCAAAAACGAAAAGTAACAGGTGATGTCA
GTAGATCCTTTTTAATGGTTATGTTTTTTTTTGTAAAATACAGAACTTTT
TTTATAATTTTAGACTGTTTCTCGAGTCCCCATTCAGTCCATTCCGTGAC
CTCTTTTTTGAGGGCAAACTTTTCAAATCTGTAGCGAGAGAGTAGATTTT
TATAGGCATACACGCTTTTTTTATAAGAATATCTTATATAAGAATATCAG
GGTGAAAATTGGCCAAATCGTAAGAATACCCTAAGAATACCCTCTAGGGT
GAGTTTCACAGAATTTGATAAAAATACAGTCATTTTGTATTTGGTTAACA
GAAAAACTGCTTCCTTTGTTAGACTTGAATTTAAACTTGTGGAGAAATGT
AATTTTAGCTCAAAATGTTCGTTCAAAAGTTCAAATTGATCATTTCTCAT
GTTTGTAAAAAATTCAAGTCTAAAACAGTAAGAATATGTTAAGAATATTT
CACCCTCAATTTTGCCTATTTCTTAAAAATACTTGACCGTCATCCAAAGT
AAGTAAGTCTGCGACCGCAGTCGGAGGCGACCCGAAGGCTCCTCTTTCGA
TAGCTATCTACCCGAAGGTAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTACCATTTTGGGAATCTTTGGTAT
GACCCGGCTGGGGGTTGAACCCACAACCTTGCGAACCGTAGCCGGATGCT
CTACCACTGTACTACGGTCGCTAAACCAAAAAACACTAACTTATCAGCCA
AAACTTGGCCGGCCCTAAGTGACTAAATTTTGGCTTGGTGACTAAAATTA
GGGCCGACTAAGTTTTGGCCGATAAGGTATTCTTATTAAAAAAAACGTGT
AATCAGATAGTTTTAGATCTTTTGTCTGCAGCTTCTTTCCGTTGTTCTGA
GCAAAATATTTTTGTGTTATTCTTTTTTTAAATCAAGATATCACAATTTG
AAATCCCTATAATGAGTTTTAGCGCGGATCTTACTTCAAAATTTCACTTT
TTCTTGTTAATTGTCAATTGTCAAAAAATTGTAACTTGAATATCTTGACT
TAAGATAAGAATTATACAAAAAAAATTTGGAGGTTTTGCGCTGGACCATG
TGAGGAATTTACAAAAAATCTGAAACCCTATACTAGGATTCCCCCGACAT
TTACGTTGCAAAAATAAAACTTGATCTTGGTCCCTTTTCGTCCTGATAAT
TAGGGGTACATTTAAAGAAGTAATAATGGTTTGACCTTTCATAATTTTTG
AACAGCTTAAATTAGGTTTTCAAGATAATATTTTTGGGATTGTAATTTTA
ATGAAATTCTTTTATTTAGACTCTTGTCACAGTATTTGTGAACAGATTAT
TTTTGTTTATTTTTGTAAGATATAGGAAAATTTAAAGAAATTAAATTATC
TACACAAAGTAGACTCTATTACAATTAGCTTAAGGGTATAAATTTTTGCG
GGGATTATATTTTGCAAATTTTCGCGAATTTCGTCTTTTTCGCGAAAATT
TTCAAACTCTTATCTCTCGCTAAATTCGCGAAATTTAATCTTTGCGAAAA
TTAAGTTTTTTACACTGAAAATTCTTTCAGCTAAGAAACTCTCTTAAACC
GAGTCTCCTTTACTCGAATGTTTCTGTAATTTGAATAAATTTTCATTCCT
CGTAGCCGTCGAGGGTTGTCATTTAAAAAAAAATTTAAATTAATTGATTT
AGTTCACATTGTAACATTTTCTTTAGAAATTCCCAACACTTCACACTCTG
TACAACTAAATTTTGACAGTTAGAAAATCAAACAGAGTGTTACCAGATAA
AAACTTAAAATATCACAAGAATAAAATATGAACTAAAAACTAGCCATTGC
TTTCACGGCAGGTACGAAATGCATAAAACATAATGCATATTGCATAATGC
ATAATAGTATTGTGTAATTTACAGAACGATTTTATATTTTCTAAAACTCT
CCTTTGTAGAGGCTAAACCGCGAAAACCTCTTTAGAAGAGTTTCTTGTAA
ACATTCCAATCAGAGGAATTTCCCCAGACATAATATTTACTTTTCGAATC
CGACGAAAGAGAAAACATTCGAATCATAATAACAAAGGTTTTTCCGTCAG
CATAAATAATAAGAATCAGATCAGAAAGGTTTCCCCCTTCTTCTGTCTCA
AAAAAACATAAACATTCGAATGTAAAAAAATTCGAAGCCTATTTTCTTTG
ATCTAGCTTCCGGATAGTCAGAAAATCTGCCGTATACTATCTTCGCTTTC
TGATTTGAATGATGGCGCTACTTTTTCCCCCATCAGAATTAGTAAAGGCC
AAAAAGTAGTTGAGCTCCAGCTCCTGGACTAGCTTCCGGATGAAGCTCTT
TAATTTATATTGGCTGGATATTAGCTTATCTAACAAAAAGCATTCACATG
GTTAATGCTTTGTAAGAGGGTAAACCCGTTGAAATTTATTAGCAATTGTT
CGAAAGAATCTCTGCTGAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTTCTTCATCCTCCAAAATTCAAATTTACAGCTTTCTACCC
TTTATTTTCTGGTAGAAAATGGTATATTTGTTTTGTTGAAAGTATTATCT
TTCAAATTCTCCTAATTATAGCCTCTAAAATTGACATTTTTCAAATATTA
TGCATTATGCATTATGCAATATGCATTATGTTTTATGCATTTTGGACCTG
CCGATTGCTTTCACTAACTGCCACCTGCTACAAATGCTTATAACGACTAA
ATGCTGATTAAAGCTTTTTAATGCTTTATAGTGAAATTTTGGAAAATTAT
TAGGAATAATTAAAATGATTCTTCTCAAAAGTATTTTCTTTGGGATATCA
ATAAGCTATCATATAAGAAAATAGAACAATCGAATGTTTATGTGTTTACC
TATTTTTGGGAAAGAAGAAGGAGGATATCTTTCTGATCTGTTGCATCTTC
TTATTATTCATGCTGACGGAAAACCCTTTGTTGTTATGATTCGAATGTTT
TCTCTTTCATTCGGGTTCGAAATGTAAATATCATGTCTGGGGAAATCCCT
CTGATTGGAATGTTTACTTAAGAAACTCTTCTAAATAGGTTTTCGCGGTT
TTAGCCTCTACAAAGGAGAGTTTTAGAAAATATAAAATCGTTCTGTAAAT
TACACTATATGGTATATATATAATCACAGATATCTGTAAAGCCCGAAGGG
CTAGATTTGCGGCTTTTATCAAAAAGTGAAGCTCATCTTTGGAAGGATTT
CCTACCAGAGTCACGTGACTAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTAAAT
TTCGAAAAAAATATCAATCGTACACAAAGGAATTGCTAGATTCAATCTGT
CGTCAAAAATGCGGCGCATTTTTTAAGGCTTCACTTTTTATTGCCCGAGA
AAGGTTAGAGATTGAACTCTAGCCCTTCGGGCTTTAAACTCAATGGTTTT
ATGCATTATGTACCCGTCGGTTTGGCACTCCTACACGGTAGAAGAAATGA
GAAATACGACGTAAAGTCGTAAACACAATGCAAGTAGTAATCATATTCCC
ATTCAAGGATATTATCTAAGGCCCCCTTTATATCACGATCAATAAAAGTG
AGGGCGATAAAAGTATGCTTTTTTATGCTTTCACATAAGCATAGAAAATT
AATTTTAGTATCTGAACATAAAAGTATGTTTTAGATTCTTTAACACTTTT
AACAAAGAATTGCCTTTATAAATTGCTTTTTAATCAAATCCCTTAAGAGT
AATTAAGAACTTAATTGCTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCTTCTTTTATAAAAAGTGCTAAGTTTTAATGGGTAATTAACCTTTTT
GTTTCGAACTTTTTTCAAACTGTCCGCAAAGAATTGAACTATTATAAATT
TTGCGGAAAATATTTCTTAAAAGATGTGTTAAAAGTTATGATATTTTTTA
AGCAAAATCCAGATGAAAATTTAATGAAAAACCACTATTTTGAAGATTTC
GCGACAAAGAAGCATTTACAAAAATTTTCCGCAAAAATTTTTATTGTTTG
GTAAAAGATACACCATCTATTGCGAAAAAAATTTCAAAATGTTTTTTCTT
CGCCGAAACTAAGCTCTTCAAAGTTGAAATACTCTTCCTCGCAAAATTCT
TCATTTTCTTCTTCATCAAACTTTTTCAATGCAATTTTTAAATTTTCAGA
TTCAAGAATAGTTTGAAAATGTATAACATACCATGGTTTTGTTCATTACA
TCAGTCAGAAAATACATTTTAAACACGGCAATTATGAAAAATTCACTATG
GTCAGAGCCCTTAATGTATATCAAGGCAACGTTGAATACTCGGTAAAAAG
GAAGAAGAAATATTATTTTATCAGGTAAGTATTATCCCTGTATCACGCGA
GTGGTATTTTAGCTCTCCCCGCCTCTCGCACCTACCTGTGTCACAACGAA
GGTAATATACCATATTACATCCCTGTCTCATGCAAGAGTGCGAGTGGTGT
TTTGCTTTCCTATCTCCCTGTCTCACAACGAAAGAAATACACAGTACATT
TCTGTCTCACAACGAAAGAAATACACAGTACATTTCTGTCTCACAACGAA
AGAAATACACAGTACATTTCTGTCTCACAACGAAAGAAATACACAGTACA
TTTCTGTCTCACAACGAAAGAAATACACAGTACATTTCTGTCTCACAACG
AAAGAAATACACAGTACATTTCTGTCTCACAACGAAAGAAATACACAGTA
CATTTCTGTCTCACAACGAAAGAAATACACAGTACATTTCTGTCTCACAA
CGAAAGAAATACACAGTACATTTCTGTCTCACAACGAAAGAAATACACAG
TACATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCAC
AACGAAAGTAATACACAGTACAGATCTGTCTCACAACGAAAGAAATACAC
AGTACAGATCTGTCTCATAACGAAAGAAATACACAGTACATCTCTGTCTC
ACAACGAAGAAAATACACAATACATCTCTGTCTCACAACGAAAGAAATAC
ACAGTACAGATCTGTCTCATAACGAAAGAAATACACAGTACAGATCTGTC
TCATAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAAT
ACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAGTACAGATCTG
TCTCATAACGAAAGAAATAAACAGTACAGATCTGTCTCATAACGAAAGAA
ATACACAGTACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCTC
TGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAG
AAATACACAGTACATCTCTGTCTCACAACGAAGGAAATACACAATACATC
TCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAA
AGAAATACACAGTACATCGTTGTCTCACAACGAAAGAAATACACAGTACA
TCTCTGTCTCACAACGAAGGAAATACACAGTACATCTCTGTCTCACAACG
AAAGAAATACACAGTACATCGTTGTCTCACAACGAAAGAAATAAACAGAA
CATCTCTGTCTCACAACGAAGGAAATACACAGTACAGATCTGTCTCATAA
CGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAG
TACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCTCTGTCTCAC
AACGAAGGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACAC
AGTACATCGTTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTC
ACAACGAAAGAAATACACAGTACAGATCTGTCTCATAACGAAAGAAATAC
ACAGTACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCTCTGTC
TCACAACGAAAGAAATACACAGTACATCGTTGTCTCACAACGAAAGAAAT
AAACAGAACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCTCTG
TCTCACAACGAAAGAAATACACAGTACATCGTTGTCTCACAACGAAAGAA
ATACACAGTACATTTCTGTCTCACAACGAAAGAAATACACAGTACATCTC
TGTCTCACAACCAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAG
AAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAGAACATC
TCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAA
AGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAGTACA
TGTCTGTCTCATAACGAAAGAAATACACAGTACATCTCTGTCTCACAACG
AAAGAAATACACAGTACATCTCTGTCTCGCAACGAAAGAAATACACAGTA
CATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAA
CGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAG
TACATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCAC
AACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAAATATAC
AGTACATCTCTGTCTCACAACGAAAGAAATACACAGTACATCTCTGTCTC
ACAACGAACGAAATACACAGTACATCTCTGTCTCACAACGAAGGAAATAC
ACAGTACATCGTTGTCTCATAACGAAAGAAATACACAGTACATCTCTGTC
TCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAGGAAAT
ACACAGTACATCGTTGTCTCATAACGAAAGAAATACACAGTACATCTCTG
TCTCACAACGAAAGAAATACACAGTACATCTCTGTCTCACAACGAAAGAA
ATACACAGTACATCTTTGTCTCACAACGAAGGAAATACACAGTACATCGT
TGTCTCATAACGAAAGAAATACACAGTACATCTTTGTCTCACAACGAAAG
AAATACACAGTACATCTCTGTCTCACAACGAAAGAAATACACAGTACATC
GTTGTCTCATAACGAAANNCAGTACATCTCTGTCTCACAACGAAAGAAAT
ACACAGTACATCTCTGTCTCACAACGAAGGAAATACACAGTACATCTCTG
TCTCACAACGAAAGAAATACACAGAACATCTCAGAGCCAATCTCGAGAAA
AGCTGGTAACAGACAAATGGACGGACGAACGAACGAACGAACGAACAGAC
AACGGTTAATTCATAGGACCTCCAGCGGGGTACCCGGAGGTAGGCCCAAA
AAGCAAAAGATTTGTAAACATAAATATTAATACAAGTAAAATTTAGTTTT
CATTTATCAGCCTTACTGTACTCGCATATATAGGGGACCTAGCAAAAGGC
AATTTTATGGGGGGAGCTAAGTTGTTGGGCGGAGCTAGAAACCTGGCTGA
AGCTATGCAGTCGACTTGTGCATCAATGCCGAAAACGGCGTTGGTCAGCT
TTTTGGCACGAAAAGTGATGAAATACAGCATTTGTCTGGGAAATTTAACA
GTGTTGTATTTTTTTTAAATTTGATTATGTTATATCCAAGCAGTGACTTA
CGGGATTAGTAGTTTTATGAATCGGCTTAGGCATTAGCTATATAGTTGAT
TTCTACTTGCAAAGCTGTCACTACCACAAAGCAAGGCAGTCCAAGATCTC
ACTCGCCAAAATTCAGTTGATGTTCTCCGATTCGATTTTCAAGGGGAATT
GGATCTTCATCGAAGAAGGGAGCCTATTTAGGAGAATTTGTTGTTGATGG
CGACTTTTAATATTATCGAATAACGGAGCGTATTGAATACTTGAACGTTG
AATTCACAGTTCAAGTGTCAACTGTAAGTTTTTACAACAAAACTGCAGGG
TGTGGTTCTTATTATTCAATTCACTCGTTTCGCCTTCTCTTTTTTTTAGA
TATTCAATTCGCGCGCATGTCAGTTAGTGTTGGCTGCAGGTGCTCTACAG
ACAGTTGGCTTGAAGACCATCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011465-exon-sc0000128-1575043694:21879..21979 | TCONS_00011465-exon-sc0000128-1575043694:21879..21979 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1575043694:21020..21125 | TCONS_00011465-exon-sc0000128-1575043694:21020..21125 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1575043694:20375..20414 | TCONS_00011465-exon-sc0000128-1575043694:20375..20414 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1575043694:4507..4540 | TCONS_00011465-exon-sc0000128-1575043694:4507..4540 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1510915933:21879..21979 | TCONS_00011465-exon-sc0000128-1510915933:21879..21979 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1510915933:21020..21125 | TCONS_00011465-exon-sc0000128-1510915933:21020..21125 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1510915933:20375..20414 | TCONS_00011465-exon-sc0000128-1510915933:20375..20414 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1510915933:4507..4540 | TCONS_00011465-exon-sc0000128-1510915933:4507..4540 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1491911889:21879..21979 | TCONS_00011465-exon-sc0000128-1491911889:21879..21979 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1491911889:21020..21125 | TCONS_00011465-exon-sc0000128-1491911889:21020..21125 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1491911889:20375..20414 | TCONS_00011465-exon-sc0000128-1491911889:20375..20414 | Clytia hemisphaerica | exon |
| TCONS_00011465-exon-sc0000128-1491911889:4507..4540 | TCONS_00011465-exon-sc0000128-1491911889:4507..4540 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000128 | supercontig | sc0000128:4507..21979 - |
Blast
BLAST of TCONS_00011465 vs. Swiss-Prot (Human)
Match: VPS54 (Vacuolar protein sorting-associated protein 54 OS=Homo sapiens GN=VPS54 PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 2.632e-29 Identity = 49/71 (69.01%), Postives = 64/71 (90.14%), Query Frame = 1
Query: 67 LFVQGQEFAVVGTLLILMKIIAEYCQCIDDVPMLVTDVMTRLCELLKIFNSRACQLVLGAGALQTVGLKTI 279
L V+GQ++AVVGT+L+L++II EYCQC+D++P + TD++TRL +LLK FNSR+CQLVLGAGALQ VGLKTI
Sbjct: 732 LIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYFNSRSCQLVLGAGALQVVGLKTI 802
The following BLAST results are available for this feature:
|
