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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011320 ID=TCONS_00011320|Name=TCONS_00011320|organism=Clytia hemisphaerica|type=transcript|length=2914bp
aaaaatacccgaagttttcctcttcgtcggtcaaatcgctataaaatcgc
ttaaatttcctcattcgccgtaccagatataaaaagcttccgtcgtgcct
gttgtaatctgttttcaatgaataatctaaaatgtactggagatgacatc
atgtaggcgttaataatgtgcgcgcgctctttcgcgagcgtgatgcgtga
tggaaggcggtcgtttcagtgtggtttagatccacactgtgacctagtct
ATTTTTCAAATAATGAGTTTCGGATGCATTTGGTATCATTTCCTAGTTCC
TTTGATTTAATTTCCTCTCTCCTTTCAAAGTATAGGATGGGTTTATCACT
TGCATTATATCATTCACCACAATTTACATTGGTTTTCATTTTATATCTGt
atgtttgtattttttgtaagaaccagtaaattttggcggaGACTTTGCTC
TTCTTTTTTGTCCTGATTTCAggcttaaatattcttaaaatgttcatgAT
ATGCTGACTTCATTCTCTTGACATTAAAGGGTTTTAAAATCAACATTTAC
TTATCCATTTCCGAACTCTGAGCTGAggatgttcttaagttgttcttagg
ttttgaccaaaattgttcttataaaaaagcgtgtatgtgtGTGTGTTGAT
ACCGTATCACTTTACCCCAATGTCCCTGTTCTCGAGGCTATCGACTTGTC
TACAAATCTTCTTTATTCGGGTAGATTTGAGAAACCATCGGTTGACCAAG
AAACTTTTAAGGAACTCTTAACTATTTGTATTCAAGATGTTTTAATGTTA
ACGTTAACGAGTGATGGCTACTACCGTCAGGTTGATGGCCTTGCCATGGG
TAGCCCTCCTGCCCCACTCCTGGCAAATGCATGGTTGAGTCAATACGATG
ACCAAATTCGAAGAGATGCTAAAGTTTATGATCGCTATATGGATGATATT
TTACGCGAGATAAAGAAAGAGAATATCCAATCAAAGTTAGTCGAGATCAA
TGGCATCAAAAATGAAACTTAAAATAAGTGAAAAGTTTTCGAATGCTCTA
CGAAAATGTAATGCGCCCTGTAACATTGTGTTTACAACGAGAAAAATGAG
ATCATGTTTATTGCCTTTACAGCCCACTGTAAAGTCGTAGTCGTAACAGA
TGTCCTTTGCAAGATAGACTTTGTGGCTCCAGGAGTCCATCCCAATAGAT
ATAGGTAAGATGAGGCTACCACAACAATCAATTTCATGGTCAGTCAGGCT
CTTCAACTTTTTGTTAGTAGCGCTAAGGAACGGGCTGACATCGGAATGGT
CCAACAGGTTGTCACTGAGCATGGTAACTGGGGATCCAGTATCAATCTTT
GCTTCGCATTGGAGAGCTTTACCGGCTATGAATACTTCGACCACACAGTT
TGATCCGTCCGTATTGCATTTCCTGGGTTCGTCTCTACACTAGCGATTCT
GTTAGCTCTTCTTGGGTGTCTTGTTTGGGTTCTCCCATCTGTGAAGTTCG
TTGGATTCCTTCCACTAGTAGATACTACTCAAGTGTCTCAAAGGGGAAGT
TCCCTTCTTATCGGGCACGTCGATCGAGGCCACTCGTAACTGCTCTATCA
CTCCAGGACCGAAAACATCTGTTTCCTGTCTGGGAGTAGACACTCCTTCG
CTCGTCGAGTGTTGTTGTTCGGTGTTAAATTCTATAGGTGCCTTTTCAAA
TCACTCACTCagattgccgtttttgctgttAAACTTTGTTCAATTCAACT
TTCATTAGCACTGGAAATGCATCGCATGCGTAAACCATGAATATTTCAGT
GGGTATCGGTACGGTGCATTCTCCTTCAATTATTCAGAGAGATATTGAAA
CGATTATCATACCTTTTCTGTTGAATTATTGATAATCCGGTGGAACGTAG
TTTCTTGAGTGAGCTCAATTTCAATAATTCATTAGTTTATGGTTAGGTAT
TCTTCACAAGTTTGCGTGTTCGAGCTAAGACGACTCAGCTATCGGTGTTA
TTGAAGTGTTCTCTTCTGAATATAACCATTCATGACAAATAGTTCATCAA
TAATTTGGTACTTGTTTACTTCAAAGTTAACCCTTGACGTCATTGGTTTC
CTGAGTCATTTCGACTGAgataaagtttttcaaattgtaTCTTGCACGTA
ACTTAAGTTCGATTTTCACATTAAAACAATTGCTTTTAGTCGTACTTTAT
TAGACTGTCACAATCAGATCTGTGCCTCTGACATTGAGCCCCCAGTTGTC
GCGCGGGAGAGGTTGTACGGTCCTCTCCTGGCGCGATAagcaaatattta
tttttatgccCCAGGCGTTTGTGATCTGACCCGCCGTTAGAAGACGGGGA
GAACTAGAATGTACAGTGGAATTCAGAGTGACAGTTgtagagcaaagtag
acattagtttttttcaataCATGTTTCACATAAATAGTTCCATTAAGATA
AATAACATTCAGCTTACGATAAATTAATACTTCTCTATATACATATGTCT
GCGTCCAGACGTTGTCGATATCTCGAGATGGCACGATGTCTCGAGATAGT
GATCACCTTCCGACCTACGGTTCGGGCATCTTCTAAAAAGGCATCCTCTG
GGCTTCCGTGGTTCCTGCACAGGCATCCTCTACGCGGGCATCTGCTAAAC
AGGCATACGACCATGGTTCGCGCATCACCAAACGGTGGAACATTGCGATC
GATCGCGGAAGTAGGCTTTGGCAGACCTGGTTCCTAGGACGGGGTCTGCT
GAAGCCTATGTTCGCGCGACTCTTGATTCTCCGATTGACTCTGGGTGATC
TTCGTCCCAGGTCTTGCTCGGCCGAGCGCTAGTTGAGAATACTCGAGCTT
TCCATTTCGTTGAGATATATTAATCTCATccataattcatttttattcac
aTTCAACTACGTAT Run BLAST on NCBI transcript from alignment at sc0000124:55151..58064 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011320 ID=TCONS_00011320|Name=TCONS_00011320|organism=Clytia hemisphaerica|type=transcript|length=2914bp|location=Sequence derived from alignment at sc0000124:55151..58064 (Clytia hemisphaerica)
ATACGTAGTTGAAtgtgaataaaaatgaattatggATGAGATTAATATAT
CTCAACGAAATGGAAAGCTCGAGTATTCTCAACTAGCGCTCGGCCGAGCA
AGACCTGGGACGAAGATCACCCAGAGTCAATCGGAGAATCAAGAGTCGCG
CGAACATAGGCTTCAGCAGACCCCGTCCTAGGAACCAGGTCTGCCAAAGC
CTACTTCCGCGATCGATCGCAATGTTCCACCGTTTGGTGATGCGCGAACC
ATGGTCGTATGCCTGTTTAGCAGATGCCCGCGTAGAGGATGCCTGTGCAG
GAACCACGGAAGCCCAGAGGATGCCTTTTTAGAAGATGCCCGAACCGTAG
GTCGGAAGGTGATCACTATCTCGAGACATCGTGCCATCTCGAGATATCGA
CAACGTCTGGACGCAGACATATGTATATAGAGAAGTATTAATTTATCGTA
AGCTGAATGTTATTTATCTTAATGGAACTATTTATGTGAAACATGtattg
aaaaaaactaatgtctactttgctctacAACTGTCACTCTGAATTCCACT
GTACATTCTAGTTCTCCCCGTCTTCTAACGGCGGGTCAGATCACAAACGC
CTGGggcataaaaataaatatttgctTATCGCGCCAGGAGAGGACCGTAC
AACCTCTCCCGCGCGACAACTGGGGGCTCAATGTCAGAGGCACAGATCTG
ATTGTGACAGTCTAATAAAGTACGACTAAAAGCAATTGTTTTAATGTGAA
AATCGAACTTAAGTTACGTGCAAGAtacaatttgaaaaactttatcTCAG
TCGAAATGACTCAGGAAACCAATGACGTCAAGGGTTAACTTTGAAGTAAA
CAAGTACCAAATTATTGATGAACTATTTGTCATGAATGGTTATATTCAGA
AGAGAACACTTCAATAACACCGATAGCTGAGTCGTCTTAGCTCGAACACG
CAAACTTGTGAAGAATACCTAACCATAAACTAATGAATTATTGAAATTGA
GCTCACTCAAGAAACTACGTTCCACCGGATTATCAATAATTCAACAGAAA
AGGTATGATAATCGTTTCAATATCTCTCTGAATAATTGAAGGAGAATGCA
CCGTACCGATACCCACTGAAATATTCATGGTTTACGCATGCGATGCATTT
CCAGTGCTAATGAAAGTTGAATTGAACAAAGTTTaacagcaaaaacggca
atctGAGTGAGTGATTTGAAAAGGCACCTATAGAATTTAACACCGAACAA
CAACACTCGACGAGCGAAGGAGTGTCTACTCCCAGACAGGAAACAGATGT
TTTCGGTCCTGGAGTGATAGAGCAGTTACGAGTGGCCTCGATCGACGTGC
CCGATAAGAAGGGAACTTCCCCTTTGAGACACTTGAGTAGTATCTACTAG
TGGAAGGAATCCAACGAACTTCACAGATGGGAGAACCCAAACAAGACACC
CAAGAAGAGCTAACAGAATCGCTAGTGTAGAGACGAACCCAGGAAATGCA
ATACGGACGGATCAAACTGTGTGGTCGAAGTATTCATAGCCGGTAAAGCT
CTCCAATGCGAAGCAAAGATTGATACTGGATCCCCAGTTACCATGCTCAG
TGACAACCTGTTGGACCATTCCGATGTCAGCCCGTTCCTTAGCGCTACTA
ACAAAAAGTTGAAGAGCCTGACTGACCATGAAATTGATTGTTGTGGTAGC
CTCATCTTACCTATATCTATTGGGATGGACTCCTGGAGCCACAAAGTCTA
TCTTGCAAAGGACATCTGTTACGACTACGACTTTACAGTGGGCTGTAAAG
GCAATAAACATGATCTCATTTTTCTCGTTGTAAACACAATGTTACAGGGC
GCATTACATTTTCGTAGAGCATTCGAAAACTTTTCACTTATTTTAAGTTT
CATTTTTGATGCCATTGATCTCGACTAACTTTGATTGGATATTCTCTTTC
TTTATCTCGCGTAAAATATCATCCATATAGCGATCATAAACTTTAGCATC
TCTTCGAATTTGGTCATCGTATTGACTCAACCATGCATTTGCCAGGAGTG
GGGCAGGAGGGCTACCCATGGCAAGGCCATCAACCTGACGGTAGTAGCCA
TCACTCGTTAACGTTAACATTAAAACATCTTGAATACAAATAGTTAAGAG
TTCCTTAAAAGTTTCTTGGTCAACCGATGGTTTCTCAAATCTACCCGAAT
AAAGAAGATTTGTAGACAAGTCGATAGCCTCGAGAACAGGGACATTGGGG
TAAAGTGATACGGTATCAACACACacacatacacgcttttttataagaac
aattttggtcaaaacctaagaacaacttaagaacatccTCAGCTCAGAGT
TCGGAAATGGATAAGTAAATGTTGATTTTAAAACCCTTTAATGTCAAGAG
AATGAAGTCAGCATATcatgaacattttaagaatatttaagccTGAAATC
AGGACAAAAAAGAAGAGCAAAGTCtccgccaaaatttactggttcttaca
aaaaatacaaacataCAGATATAAAATGAAAACCAATGTAAATTGTGGTG
AATGATATAATGCAAGTGATAAACCCATCCTATACTTTGAAAGGAGAGAG
GAAATTAAATCAAAGGAACTAGGAAATGATACCAAATGCATCCGAAACTC
ATTATTTGAAAAATagactaggtcacagtgtggatctaaaccacactgaa
acgaccgccttccatcacgcatcacgctcgcgaaagagcgcgcgcacatt
attaacgcctacatgatgtcatctccagtacattttagattattcattga
aaacagattacaacaggcacgacggaagctttttatatctggtacggcga
atgaggaaatttaagcgattttatagcgatttgaccgacgaagaggaaaa
cttcgggtattttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011320-exon-sc0000124-1491911889:55151..58064 | TCONS_00011320-exon-sc0000124-1491911889:55151..58064 | Clytia hemisphaerica | exon |
| TCONS_00011320-exon-sc0000124-1510915933:55151..58064 | TCONS_00011320-exon-sc0000124-1510915933:55151..58064 | Clytia hemisphaerica | exon |
| TCONS_00011320-exon-sc0000124-1575043694:55151..58064 | TCONS_00011320-exon-sc0000124-1575043694:55151..58064 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000124 | supercontig | sc0000124:55151..58064 . |
Blast
The following BLAST results are available for this feature:
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