TCONS_00011213 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011213
Unique NameTCONS_00011213
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1791

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011213 ID=TCONS_00011213|Name=TCONS_00011213|organism=Clytia hemisphaerica|type=transcript|length=1791bp
GTTTCAGAAACCCGGCATTCCATGTATTTTCATCTCCGGAATAGACCAAT
AATCTCCCCCTCAGTTTTTTCTCGCAACTTGGTCTCATTCTCCCATAGTT
TGAATTTTTGCTCACCATATTGTAcaagtactcttaggtgccaaataaac
gggggggggggNACCAGTTGCTGGAAGAAcaagaaatcaacaaaagatCA
AAAGAACTGGCTGCCTCCCTGCAAAGAAGATATCTTCAGACACACAGCGA
ACACCAAGAACTGATAGAGAAATTTAATCAAGTGTTAGCGCAACTTTACG
AAGCACAACAGCATATGAACATCGAACAACTAGACAAGTCAATGAGCTAT
CAATCCTTAGAATCCGCGCGGCGATTGGCGGACGAAATGAAGCAACAAGC
GTCCGATTATGCAAAGGAGGCAGGACATGGTAGAGTCACAAATAATAGCC
TTCACGAGGAAAACGAAACTCTACAAATGAAGATTGCAAGACTGGAAAAT
GAATGTAAACTATTGAGGCAAGAAAATCAATTACTGTCAAAAGCTCAACC
TTCCTCAAGGCCATCATGCTCTCCTTCACCGCAACGTCACAGATTCGAAT
CCAATACAAGTACACATGGAGATGATGAAAACACGACATCTACCAGCAAT
AGTATTACTCCTGAAGAACTTCAAGAACAATTGAAGCTAGCAGAGGAGTC
GTTAGAGAAATTGACCACTGAGCGAACAGATACGATCGAACGTTTCACGC
AGAGACAACAGCAATTGATGAATTTCATTACAACCATACTGCTTTTCATG
ATGATCTTTTTCGTGATGATTTTACTTGGACTCATTGACGTATCACCCGG
GGCTCTCCCTCTCCTTGATGAGCACTCATGGAATGAATTTCTTGAACATC
TATTCTAAAATCAATCGAGAGGAAGAGCAGTTTTGGAAGTTTTTAAAACG
ACGAGCGCCATATTCAAAGGAAGCGAGAGTCTGTCAAGTCATTTGGCCCC
ACATGTTGTCTATCCATGCAGGGAATGCTGGGATATTTGGAAATGTCATG
GATGGTTTTTATGATAGAAGAAAGTCAGAATTATCAATCAGTCTTAGTTG
TACGGGttttaaaatgataaatatacaAAAGAAGACGAattaaaaaagat
ataaaattaTAGGCTCACTCTTTTGGAACACAAANATAATTTTTTGTGAC
AATTATTtctagaaatttatgaaatttcaaTTTGACGTGAGTTGTGAGTA
GATAGCAGTTTTTGACCACATGCAAATGGTTTTATCCGTGAAAATTATAT
CTTGTGCGTCTACCATAGATTGACATGTGTATAGGAGCCCCCAGCGGTAA
GTCtaatcacgatatcacgcattttctttgtcttcaataaacagcaaaaa
aattggataatcatgcatccctttgaaaaagtctaaATCACGCattatgg
ctcaaattttttcaaatcacgatcaacgttttgacctctgatcacgcaat
cacgaaaaaaaaaaatccaaatcacgtaatctcGCTAGAAAAAAGTCctc
atcacgccatcacgaaaactgCTTGGGGGGCTCGTATAGGGACCTAACTT
TGTAATGACCGAAACATTGAGGAccaaaactttttactttttgagtAATA
TTTATTTAGATTTAGTTTAGATGTATATCATTATATGTTATGTTATTCCC
TTGGTTTTCAGTTTGtgctttctttatttttgaacataTTTGAATTTTAA
CCAGTTTTTTTCAGCGACTCGTTTCCTTTCGAAGTTTCCTG
Run BLAST on NCBI

protein sequence of TCONS_00011213-protein

>TCONS_00011213-protein ID=TCONS_00011213-protein|Name=TCONS_00011213-protein|organism=Clytia hemisphaerica|type=polypeptide|length=197bp
MNIEQLDKSMSYQSLESARRLADEMKQQASDYAKEAGHGRVTNNSLHEEN
ETLQMKIARLENECKLLRQENQLLSKAQPSSRPSCSPSPQRHRFESNTST
HGDDENTTSTSNSITPEELQEQLKLAEESLEKLTTERTDTIERFTQRQQQ
LMNFITTILLFMMIFFVMILLGLIDVSPGALPLLDEHSWNEFLEHLF
Run BLAST on NCBI

transcript from alignment at sc0000122:462403..473056+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011213 ID=TCONS_00011213|Name=TCONS_00011213|organism=Clytia hemisphaerica|type=transcript|length=10654bp|location=Sequence derived from alignment at sc0000122:462403..473056+ (Clytia hemisphaerica)
GTTTCAGAAACCCGGCATTCCATGTATTTTCATCTCCGGAATAGACCAAT
AATCTCCCCCTCAGTTTTTTCTCGCAACTTGGTCTCATTCTCCCATAGTT
TGAATTTTTGCTCACCATATTGTAcaagtactcttaggtgccaaataaac
gggggggggggNACCAGTTGCTGGAAGAAcaagaaatcaacaaaagatCA
AAAGAACTGGCTGCCTCCCTGCAAAGTAAGAATATACCTGCATTTTATTT
ATTATCTTAAGTTAGAGtcaactttaaagaaagtaAATCTTTTTCCATCA
GAAATGTAAGACCATTCGTCAAAACGTTCAAAATTAATAGCCTTTTTTTA
TGTAATGTAGAGAGAAGAAAATTCCTTTGTCAAATAGAACAATCAACTGA
CAAAACGCGCATTAAAGTGTTTTAATGATTCGTTTAAAAACTGCAATGTT
TTGCGAGATGGGCAGCTTTCTTATGATCGTTTCAGACATCAGACCTTATA
CACTGCCAATCTGGCGTTTCAAGGAAGAATCTTTTTAGTGGAATTTTTCG
ATTTAGGATTCGAATTGAAAGTGCTAACAGTATACAGGCTCAAATTTTCA
TTCTTTGCAACTTTATTTTCCAGGAAGATATCTTCAGACACACAGCGAAC
ACCAAGAACTGATAGAGAAATTTAATCAAGTGTTAGGTATCTGATAAAAG
ACTGTTTAAATCCAGGTTTCTTTTGAATTGGTAGACAGTATATCCGAAGA
CCTTTCTGTTTTACCCAGTTTGAATCTTATGTTTATTTGTTTTCATTGTT
AGTTCGTTAGAAATCCCATCCAGTTTATTTCTTTCTTAGATTTCTTTAGT
TGAGCTAGAATATGACAATTGACAAGTTCCATGACAATTGACAAGTTCCA
GAAGCCTTTTAAACCCTGGTGAAGAGAATGGGCTCCAGTTTACCCGAAGA
AAAAGGGAATTCCATTTAGATTCCATTAGCTGCATGTTTGATAGGCCGAA
AATgcgaatttaaaaattttgtggcAGATTTAATTTCGCCAAAATGGCAA
ATATTtgcgaaatcgcgaaatttaatctcgcgaaagttaGTCCTATAAAA
GTAAACTGGGACCCAGTCTTTTTACAGGGCTCATATTGATAAGTGTATTC
ATttcaacaataaaatttttcagCGCAACTTTACGAAGCACAACAGCATA
TGAACATCGAACAACTAGACAAGTCAATGAGCTATCAATCCTTAGAATCC
GCGCGGCGATTGGCGGACGAAATGAAGCAACAAGCGTCCGATTATGCAAA
GGAGGCAGGACATGGTAGAGGTTTGTGTCCGGAAGAACTATCTTGTTGTA
TCGGctgtttgtttctttttattctttgtcTCGGAAAGCTACGAAGGCAA
TTTCTACCACTATTTggatatttttattaattttgaatgTTACAAATATT
AAATGGAGTGTGAATAAAAAGTACATGAAGAGCCGTCTTAATTTTTGATC
GGTCCTTCAATGAAGTTGATTGTCTTCTTCAACCTTCTTTACAGTCACAA
ATAATAGCCTTCACGAGGAAAACGAAACTCTACAAATGAAGATTGCAAGA
CTGGAAAATGAATGTAAACTGTAAGTCGGGTTTAATTtgtattattatcc
atatagcggtcattaagtaagccattaaagattcgaacggcgggtggtat
tgaaaggttctatgactcaaatagtcataccagcgctgagaaaactaagg
cgtcgtgcttcagagggctgaaatatcattaaccgccctggttatagagc
gataacgtcatttgcggcccgctcggaactttattgaagtcgttgcattg
aagcggtgagactaaaccgacgtcagaaaaaaacacttttttgtcatttg
aggcccgctcgcaagggtactcaaaacttgttgaagtcattgcattggaG
CGAAAATACTtggctgacgctagaaaaaaaacgttgtttgaatttttgat
acggataataatagtaatagcgttaagttttcgttcgttgttgtcattaa
ttctgcccttgcagtttgattattagccctctagtgccatttgcACCCTC
CGCTTCgcgaaaataacaacaacgacctcaaactgaacgccaTTGTTATA
TTAATTGGCAACATATGGTTGATGAAATATTTTGGCGTTTTTCATTACCC
GACCGAGCGAATTCATATcaagtaaaattgaaaaaaaatgagatcgggta
gctcagtcggtagagcattcgccttataatctaagggttgtgggttcgat
ccccggtcaccgccaactcagcggatgagtagcttagattgggtaatctg
atctaggcggtaagttactgggNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcgatctcccaggt
ctagcgcaaatagaaaaggggatagactccctcactcccggctccgccga
cagccaccagatgaatatacttacttacttactactgAAAAAAAAATGGT
TCAAACACCGAAAAGCTCCGGGAAAATGAATTCAATCatgaaattttaag
ttttgttttaaaCCTATGTTTTTATCTTTCTCGAATCTCTCTCTTCATAG
ATTGAGGCAAGAAAATCAATTACTGTCAAAAGCTCAACCTTCCTCAAGGC
CATCATGCGTAAGTCTTTTCACATACTTACAGATTTGCTtctacttttga
aatatttttggaatacttataaaattttacttttaagtTACAATTGAGAG
CGTTCTCTAATCCGACGTTCTCTTATTCTACGCGTTCCATTATTCGATGG
TATTGAAAGCCATCGTGAACGAgaaactctctaattcgatagtaattcga
tacgctccattgggctattccagaaaaaaatgaatatatgGGGGGGTGGA
GGAATTGAAATCGactgttttttcgtttttttgtgaTTCGTTCTTTCAAA
TAGCACTTCTTCACGCATTTTCCTCTTTTGCAGTCTCCTTCACCGCAACG
TCACAGATTCGAATCCAATACAAGTACAGTGAGTGTAAACAATTTTTTGG
TTTATAACTTCTTATCAAAGCATGAGCATATCTTAAGTCCGtttgcttta
agtgtgcactattTTGCTTGCCATCttcaatcaattttaattctaacata
ttatataccgaaTATCAAAGCGAATTTATGGTACTTGAAGAAGTTGTTAT
TTTTACGTTAtgtaagggaagaaattttcgcggaatttaagtTCGCGGTT
GAGGGaactttttgtttacaattccaaaaagaccaattttagggtgattt
tttaaatcctgagaataATCATgtttcgtggaatttaatttcgcggattc
gTCAAAGaactgcgaaattaaattctgcgaaaatttcttcccttaaggta
tgcaAAATCTTGATGTAGTCGTTTATTGAAAGCCGTGTATTTAAAAAGAT
CTCGAGCAAGCTTCGAAATTCTTACACACTGTTTGTGCTGAGAGGGGTTA
AAAGGAACTTCAAGAAGGAGAAAGCTTCATGAAAAATTACAACTACTATA
CTGTTGCCATTTTCAACACGACAAGTCAGTTTACCAAtatgtttcttttt
caaatgaaTTCACTTTTCTTTACAGCATGGAGATGATGAAAACACGACAT
CTACCAGCAATAGTATTACTGTAAGTCTCTTCATTGACATCGCTGGTTTT
CATTTCTATATACAATTTTCGTAGACATTGTACATGTTATTCTTCTCACG
CATACACACCTCGACATATCTTCGATTCTTTTGCACGTCTTAAGCccggt
ctccacttgcgcgcgctgcgatcaaACTCTATCTAGCAAAGCtcccacgc
tattggtcaaaagaaaaatgaagcaattccattggcgcgatctgacgcaA
CGGTCGAAAAAAGTTAAAAcgtattcaacttttttttcgagcgctcGCTA
Cattttcatgatgtaatcttttttccaggcaaaaaggattgaagccaaac
gGTGTGGTCGCAGCGCGCGttagtggagaccggcctttactcTTGATTTA
TACCTACCATAAAGTGGCAATTTACTCAATTGttttaaatatcaaaaaat
ttgagaTAGAAATTATGTTTTAGAATTGTGGTTCTTATTGATTTCAGCGT
GCTTTATACCTGTAGTGTTTCTCTTGTCTTGAGGCCTTCATTTTAGGATA
GCTTGGATGCTTGTTACCCTTTCTCTTGCAATTCAACATCTCATTGGGTT
CCCAGCTAGAAGTAACCacaattttaaaatataattgctAAACTCTTGAA
TGACTGCTAATAATTTGGTAGtctttttaaaactgtttttattatattta
tgtGATATTATTAAATGTTTGAAATAAAGCTATAAGTTAATAATTCACGC
ACTAAACGATAAACagattaaataaatttttaatattaaaGTAGTGAACG
TAACTTATAATAACATGGTCGGATTgcttgaatgaatgaatgaaagaacg
aatgaatgaatgaatgaatgaatgaatgagtggTTGGTTGGTTGCGTGAA
TCGCTAAAATACGATTAAAATGTCGCGGATAGTATAAGATTAAACGATAA
AGCGCTTCATAATCATTCCATCGAAAAGCATCTTGGCTATCTTAATATGT
TGGCAAGAGAAACACTACCAGGTAACCTTGCTAAGATTTTTGTTCAAATC
TTTTCATTGCTTTTATTTATGTtgtgtacagggtgtcccgtaAAATGTCC
TGTGTCAGAACACGActacaaataaaaaaataatcaactaCACAAATGTT
TCCAACTTGTAGTCAAATTTTGATACAACACTCTTTTTCAGGACACCCTG
TAAAATTCTTGTGctatattttcagatttttttgtccTTTAGGGTCGGCG
CAAAATCTGAGAATttgcaaaaactaaaacttgGTATAATTTATTTCCCC
CCCTGTAGATTGATGAGaattgttctgtaaaatacaacgaTTGGGTGGAC
TGGCTGGTTATTGAAGCATTCTGATCCAAGTCGAAATGAATTCTGCCAGC
ATCATAGTGGCTAACAATCTGAAATTTCAAATCTTATCACTCCAACGATG
TTAATTGgtcttgaaaaatatatttcttggAATGCGTTCGATTAAACTGT
GTGGATGGTTTGTATTTAATGTGAAAGCCTACTTTGCTTGATTAATTGTA
GTTTATGTTTCGTGTTATTTGGTTTTTGGTGTTGCGTATTATCTAACTGT
TAATTATACAAAAtgtgttatttttttattgaatttcaattaatttaatt
tttagagAGTACacactttatttttttaatgaattaattttttcttaatt
attaatcgaaaaatatttttatacatcaatcatatcatatcatattcTCG
TATACGTTCAAACTTTCATCTTGCACTGTTGTTTCTTTCTAGCGGAAAAA
CCTTCTATCTCATTTTCTATCTCATTCAATGTGTCACCCTCtcttgacgt
caatgcaatgacttctttcgtTCTTAAATAAGTATTTATCTTTGATAATC
CAGCCGGactagaatatttcaaaagtaaaacatAACCCAAAAATAATCAT
CTCCTTGGATTTCAAATAAGAATAATACGTTAAGGGAAGGGAATACGTTC
GGTGTTACAGAATTATTTCGATGTGTCTTATGCTATCGTATCATTTTAAc
ccaaatttcattttcaattggTTATGGGTTGTGTTgagttatgtttttat
tttatacttttCTGCCCACTTTCTGCCCACATTTTTCTCACTCTTGAAAT
TATAATTTGCAGGACATTCAAGTAGAAAGAACCATAATTGCAACAAGAGT
GCTTTACACACGTTCATTTTGTTGGTCGACTTGAAAATTCTCTGAGCAAT
CtcaaacaccccccccccctgcaattttttaaaaagctgtGAACTTTTTG
GCAGTTTTTGGCTAGCTATTTTATCTGAAAGATTttgtttcagccaaaaa
atGGGTGGGTGTTAAGCATCTTACAGacacgtcatcaaattttgacgtca
aatatttttttcattacaTTGCACTTCTTTCTTTCTCGTTTTCACTATAC
GCAACCTTTTTGCTAATATATCTACTTATCTACAACACGCAGTTCTTCTT
TACCCATAACCTCATATTTACTGCTTACTGGCGAGATGTGTTTCAAAAAT
CCTAGTGTTAGTTTTGTAACTTTTTctacttttatcaattttactAAAAA
CATTATACACAATAAGgagaaaatataaataatattTGTTAGTTTCCTTT
ACCTTTTGATCAATCCAAACCAATCCTTTAGAAGATGAAAATTTCTTCGC
TCAGTGAAATATACAGTGAAATAAACGAATAAACAGAATCACTCAAAAAA
TTGAGCGAAATATCGAGAAAGAAAGAACTACCTAATAATTGCTACACTAT
GCTGGCGCAATCTCCAGGCAATGCAGTGTATTGTAGATTTTATtcaaata
ccttaagggaagaaattttcgccggacaaattttcgcggtttttttgACA
GATCcgtgaaattaaatttcgcCGAACACGAATATTCTCAGGATTTAGTA
AATCACTTCTACAATTGTTCTTTTTATGGCAAAAAATTCtaaccgcgaaa
gtttctttctCCGAGAAATTCTTCCCTTAGGGTAAAATAATTGTAAatta
gttctttatttctcgATACTTGAAGTATGACAGCCCATTTCGCatattga
aattaattttctttcttctatCTAGCCTGAAGAACTTCAAGAACAATTGA
AGCTAGCAGAGGAGTCGTTAGAGAAATTGACCACTGAGCGAACAGATACG
ATCGAACGTTTCACGCAGAGACAACAGCAATTGGTACGTACTTTCGTTTT
GTGAATACAGTGGAGTTTCTGCGACTCGAGCACGCACggggaacgcaaat
ttgttcgagtaatggagtaagatttataaggcattgttaacttaaGGGAC
TGGAAAACTGGCCAATGATGTCACTTTCAATGGCAACAGGTGGTCACACC
GGGTCACACTTCACAAACTTTGATCTTCTATCTACAAGGAGCAATAATCA
AACATAAAATCCCTTGACACTTCTGCACATTGGAGTCCTTTTGGGGACAA
AAAGCAGAGACCCCACTCGGCATGTTTTTCATGATTTTCATGATTTTTGC
AAATTTGGCATTTTTCATGGTTTTTAGCATGTTTTGGATCATTTTGGCAT
GTTTTTCAGAGAAACATTAGGgaattttgtttatattgtcTCTTCTCTGT
CCTGATATTCAGATTCGTTAAAGATAGCTCAAAATAGCACTTTCAGCCcc
caaaattctaaaattttctcacttgcccaaccatggtgggcaacgttaaa
tattattttaagttttcaataaATACCATTGACAGGAATGTTAAAACAAG
GATGTGTCAGGCAGGGGGGATCCATCTTTTCCAATGCTTAATAGGGAGGT
AGGagatttccagaaaaaaattgggggtggaagattttaggggggggggg
ggcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNggggggggggggtcaaggaAAAATTAGGGGGGTAACa
acttttggtcaaaatatctatcaggcgagaccaatttaatttgttgttct
aagggcagatcgttagcaaaatatgggtcggtcggtcggtaaaataagaa
tatatttttcatttatcaggatTGGTAAAGTaccaaaaatgttttccaaa
atatatctggttcaaaaattcactttttttatctccgatgaagatcataa
taaaatcttagtgtacggaatgcttgattttctaaattttttaatttctt
gaattaattttcagctttattcaaatttgatacTTACacataactagtgt
gtaaaatatattgtagtggaaattcaatattattattttcttgattttag
caaaaatagggtcggtcgggcccgtaggacaacaaattaaattggtcttg
cCTCATATTTATATTGTTTTAGATATTTGGTATGGGACAACTAAAAAACA
AGTGTAGATAGCTAAATCTTTGCCTGGGGCACCATGTTAAACtctttttt
tcatataatttttgatacaaatttcaatgttttcggTTTTGAATGACTGG
TGGACTGCTGCTGGCAATAGCAcgggttcgaaattttttttaaatagggg
ATACACATATAGCTTTATAAAACTCTACTTTATAAAACAAGTAGCCAATA
TTTGGATAACTTTTGTCAAGACTACATGTCACTGAACCGCCTCATTATTC
TTTCAGGGTTTAGACAGGTCCATGACCTCGGCAAAACAGGGTTTTTTTTA
AGCAccaatttttaaaatgtctcTTGCATTATAGCTTGTATTTTAGTGTC
TGGATATAcatgatttttaaatatttctcctTTGGGGCCAACCTTGGTTT
TTTCAGGAACAGGGCTCCCTAAGCTAAAATTTGCTTTATGTATGTACATT
TTTCTGACTCTTAGTTATATTGTTCCTACATTTCAATCAGTTATTTTCTA
GTTTTCCActcttgaaaagacacttttatGGCATCTTGAAAATCATAAAC
TTTTCCTATTgtccaaccatggtgggctacATTTTAAATTGCAGCCTTTG
ATTGATTAATACATTCCAAGTGAAATGATTTCTACTTATGTTTGTGATAT
TTATTAGATTATATATCGATTTCTCATCATGTCTACATCACTGTTTTTAG
GTACGGGAAACACGGGGACTTAGTTGATTAATAACTCTACTTTTTggcat
gtttttcatgtttttccatttaaaattagcaTTATTTAGCATTCTTTTCT
GctctttttggcattttttcatgcatgttttttcaaaaatgccagTGGGA
TCTCTGAAAAAGTAGCTACATTTGTCACCATATCTAAGAATCtcgaatga
aaatgaaatgaaaacctaagacccgatgatgggagaagaatctcttgATC
CGTAATCTCGtaatccaagccacgataaacttccaatatgaagtCTAAGA
ATGACTAAACTGAAAACGAAACAAGAGTCAAGGTATAGGTGGAAAATTCA
GAATATTAAAATTCAGTCAGCATTTCAAAATTGTTACAATCGGTTTGCCT
AAATGGGTTCTTCAAGAAAATATCGGTTCATGGGGAGTAGAGGAtaaatt
gattttcaatgtTCTACTCCTGGATATTTCGCTATATCTCCCGGGTGCGT
GTTTCGACcatgaaaaaaacattaaatcgacaccatggacatggcagttt
ttcacAACTTTTTCAATACCAATGGACTCTAGTGTTACCGCAAAACGTTC
ATTGAAtttcttctttcatttcttttgcAGATGAATTTCATTACAACCAT
ACTGCTTTTCATGATGATCTTTTTCGTGATGATTTTACTTGGACTCATTG
ACGTATCACCCGGGGCTCTCCCTCTCCTTGATGAGCACTCATGGAATGAA
TTTCTTGAACATCTATTCTAAAATCAATCGAGAGGAAGAGCAGTTTTGGA
AGTTTTTAAAACGACGAGCGCCATATTCAAAGGAAGCGAGAGTCTGTCAA
GTCATTTGGCCCCACATGTTGTCTATCCATGCAGGGAATGCTGGGATATT
TGGAAATGTCATGGATGGTTTTTATGATAGAAGAAAGTCAGAATTATCAA
TCAGTCTTAGTTGTACGGGttttaaaatgataaatatacaAAAGAAGACG
AattaaaaaagatataaaattaTAGGCTCACTCTTTTGGAACACAAANAT
AATTTTTTGTGACAATTATTtctagaaatttatgaaatttcaaTTTGACG
TGAGTTGTGAGTAGATAGCAGTTTTTGACCACATGCAAATGGTTTTATCC
GTGAAAATTATATCTTGTGCGTCTACCATAGATTGACATGTGTATAGGAG
CCCCCAGCGGTAAGTCtaatcacgatatcacgcattttctttgtcttcaa
taaacagcaaaaaaattggataatcatgcatccctttgaaaaagtctaaA
TCACGCattatggctcaaattttttcaaatcacgatcaacgttttgacct
ctgatcacgcaatcacgaaaaaaaaaaatccaaatcacgtaatctcGCTA
GAAAAAAGTCctcatcacgccatcacgaaaactgCTTGGGGGGCTCGTAT
AGGGACCTAACTTTGTAATGACCGAAACATTGAGGAccaaaactttttac
tttttgagtAATATTTATTTAGATTTAGTTTAGATGTATATCATTATATG
TTATGTTATTCCCTTGGTTTTCAGTTTGtgctttctttatttttgaacat
aTTTGAATTTTAACCAGTTTTTTTCAGCGACTCGTTTCCTTTCGAAGTTT
CCTG

Coding sequence (CDS) from alignment at sc0000122:462403..473056+

>TCONS_00011213 ID=TCONS_00011213|Name=TCONS_00011213|organism=Clytia hemisphaerica|type=CDS|length=4158bp|location=Sequence derived from alignment at sc0000122:462403..473056+ (Clytia hemisphaerica)
ATGAACATCGAACAACTAGACAAGTCAATGAGCTATCAATCCTTAGAATC
CGCGCGGCGATTGGCGGACGAAATGAAGCAACAAGCGTCCGATTATGCAA
AGGAGGCAGGACATGGTAGAGTCACAAATAATAGCCTTCACGAGGAAAAC
GAAACTCTACAAATGAAGATTGCAAGACTGGAAAATGAATGTAAACTATT
GAGGCAAGAAAATCAATTACTGTCAAAAGCTCAACCTTCCTCAAGGCCAT
CATGCTCTCCTTCACCGCAACGTCACAGATTCGAATCCAATACAAGTACA
CATGGAGATGATGAAAACACGACATCTACCAGCAATAGTATTACTCCTGA
AGAACTTCAAGAACAATTGAAGCTAGCAGAGGAGTCGTTAGAGAAATTGA
CCACTGAGCGAACAGATACGATCGAACGTTTCACGCAGAGACAACAGCAA
TTGATGAATTTCATTACAACCATACTGCTTTTCATGATGATCTTTTTCGT
GATGATTTTACTTGGACTCATTGACGTATCACCCGGGGCTCTCCCTCTCC
TTGATGAGCACTCATGGAATGAATTTCTTGAACATCTATTCTAAATGAAC
ATCGAACAACTAGACAAGTCAATGAGCTATCAATCCTTAGAATCCGCGCG
GCGATTGGCGGACGAAATGAAGCAACAAGCGTCCGATTATGCAAAGGAGG
CAGGACATGGTAGAGTCACAAATAATAGCCTTCACGAGGAAAACGAAACT
CTACAAATGAAGATTGCAAGACTGGAAAATGAATGTAAACTATTGAGGCA
AGAAAATCAATTACTGTCAAAAGCTCAACCTTCCTCAAGGCCATCATGCT
CTCCTTCACCGCAACGTCACAGATTCGAATCCAATACAAGTACACATGGA
GATGATGAAAACACGACATCTACCAGCAATAGTATTACTCCTGAAGAACT
TCAAGAACAATTGAAGCTAGCAGAGGAGTCGTTAGAGAAATTGACCACTG
AGCGAACAGATACGATCGAACGTTTCACGCAGAGACAACAGCAATTGATG
AATTTCATTACAACCATACTGCTTTTCATGATGATCTTTTTCGTGATGAT
TTTACTTGGACTCATTGACGTATCACCCGGGGCTCTCCCTCTCCTTGATG
AGCACTCATGGAATGAATTTCTTGAACATCTATTCTAAATGAACATCGAA
CAACTAGACAAGTCAATGAGCTATCAATCCTTAGAATCCGCGCGGCGATT
GGCGGACGAAATGAAGCAACAAGCGTCCGATTATGCAAAGGAGGCAGGAC
ATGGTAGAGTCACAAATAATAGCCTTCACGAGGAAAACGAAACTCTACAA
ATGAAGATTGCAAGACTGGAAAATGAATGTAAACTATTGAGGCAAGAAAA
TCAATTACTGTCAAAAGCTCAACCTTCCTCAAGGCCATCATGCTCTCCTT
CACCGCAACGTCACAGATTCGAATCCAATACAAGTACACATGGAGATGAT
GAAAACACGACATCTACCAGCAATAGTATTACTCCTGAAGAACTTCAAGA
ACAATTGAAGCTAGCAGAGGAGTCGTTAGAGAAATTGACCACTGAGCGAA
CAGATACGATCGAACGTTTCACGCAGAGACAACAGCAATTGATGAATTTC
ATTACAACCATACTGCTTTTCATGATGATCTTTTTCGTGATGATTTTACT
TGGACTCATTGACGTATCACCCGGGGCTCTCCCTCTCCTTGATGAGCACT
CATGGAATGAATTTCTTGAACATCTATTCTAAATGAACATCGAACAACTA
GACAAGTCAATGAGCTATCAATCCTTAGAATCCGCGCGGCGATTGGCGGA
CGAAATGAAGCAACAAGCGTCCGATTATGCAAAGGAGGCAGGACATGGTA
GAGTCACAAATAATAGCCTTCACGAGGAAAACGAAACTCTACAAATGAAG
ATTGCAAGACTGGAAAATGAATGTAAACTATTGAGGCAAGAAAATCAATT
ACTGTCAAAAGCTCAACCTTCCTCAAGGCCATCATGCTCTCCTTCACCGC
AACGTCACAGATTCGAATCCAATACAAGTACACATGGAGATGATGAAAAC
ACGACATCTACCAGCAATAGTATTACTCCTGAAGAACTTCAAGAACAATT
GAAGCTAGCAGAGGAGTCGTTAGAGAAATTGACCACTGAGCGAACAGATA
CGATCGAACGTTTCACGCAGAGACAACAGCAATTGATGAATTTCATTACA
ACCATACTGCTTTTCATGATGATCTTTTTCGTGATGATTTTACTTGGACT
CATTGACGTATCACCCGGGGCTCTCCCTCTCCTTGATGAGCACTCATGGA
ATGAATTTCTTGAACATCTATTCTAAATGAACATCGAACAACTAGACAAG
TCAATGAGCTATCAATCCTTAGAATCCGCGCGGCGATTGGCGGACGAAAT
GAAGCAACAAGCGTCCGATTATGCAAAGGAGGCAGGACATGGTAGAGTCA
CAAATAATAGCCTTCACGAGGAAAACGAAACTCTACAAATGAAGATTGCA
AGACTGGAAAATGAATGTAAACTATTGAGGCAAGAAAATCAATTACTGTC
AAAAGCTCAACCTTCCTCAAGGCCATCATGCTCTCCTTCACCGCAACGTC
ACAGATTCGAATCCAATACAAGTACACATGGAGATGATGAAAACACGACA
TCTACCAGCAATAGTATTACTCCTGAAGAACTTCAAGAACAATTGAAGCT
AGCAGAGGAGTCGTTAGAGAAATTGACCACTGAGCGAACAGATACGATCG
AACGTTTCACGCAGAGACAACAGCAATTGATGAATTTCATTACAACCATA
CTGCTTTTCATGATGATCTTTTTCGTGATGATTTTACTTGGACTCATTGA
CGTATCACCCGGGGCTCTCCCTCTCCTTGATGAGCACTCATGGAATGAAT
TTCTTGAACATCTATTCTAAATGAACATCGAACAACTAGACAAGTCAATG
AGCTATCAATCCTTAGAATCCGCGCGGCGATTGGCGGACGAAATGAAGCA
ACAAGCGTCCGATTATGCAAAGGAGGCAGGACATGGTAGAGTCACAAATA
ATAGCCTTCACGAGGAAAACGAAACTCTACAAATGAAGATTGCAAGACTG
GAAAATGAATGTAAACTATTGAGGCAAGAAAATCAATTACTGTCAAAAGC
TCAACCTTCCTCAAGGCCATCATGCTCTCCTTCACCGCAACGTCACAGAT
TCGAATCCAATACAAGTACACATGGAGATGATGAAAACACGACATCTACC
AGCAATAGTATTACTCCTGAAGAACTTCAAGAACAATTGAAGCTAGCAGA
GGAGTCGTTAGAGAAATTGACCACTGAGCGAACAGATACGATCGAACGTT
TCACGCAGAGACAACAGCAATTGATGAATTTCATTACAACCATACTGCTT
TTCATGATGATCTTTTTCGTGATGATTTTACTTGGACTCATTGACGTATC
ACCCGGGGCTCTCCCTCTCCTTGATGAGCACTCATGGAATGAATTTCTTG
AACATCTATTCTAAATGAACATCGAACAACTAGACAAGTCAATGAGCTAT
CAATCCTTAGAATCCGCGCGGCGATTGGCGGACGAAATGAAGCAACAAGC
GTCCGATTATGCAAAGGAGGCAGGACATGGTAGAGTCACAAATAATAGCC
TTCACGAGGAAAACGAAACTCTACAAATGAAGATTGCAAGACTGGAAAAT
GAATGTAAACTATTGAGGCAAGAAAATCAATTACTGTCAAAAGCTCAACC
TTCCTCAAGGCCATCATGCTCTCCTTCACCGCAACGTCACAGATTCGAAT
CCAATACAAGTACACATGGAGATGATGAAAACACGACATCTACCAGCAAT
AGTATTACTCCTGAAGAACTTCAAGAACAATTGAAGCTAGCAGAGGAGTC
GTTAGAGAAATTGACCACTGAGCGAACAGATACGATCGAACGTTTCACGC
AGAGACAACAGCAATTGATGAATTTCATTACAACCATACTGCTTTTCATG
ATGATCTTTTTCGTGATGATTTTACTTGGACTCATTGACGTATCACCCGG
GGCTCTCCCTCTCCTTGATGAGCACTCATGGAATGAATTTCTTGAACATC
TATTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006278XLOC_006278Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011213-proteinTCONS_00011213-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011213-exon-sc0000122-1491911889:462403..462627TCONS_00011213-exon-sc0000122-1491911889:462403..462627Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1510915933:462403..462627TCONS_00011213-exon-sc0000122-1510915933:462403..462627Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1575043694:462403..462627TCONS_00011213-exon-sc0000122-1575043694:462403..462627Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1491911889:463026..463088TCONS_00011213-exon-sc0000122-1491911889:463026..463088Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1510915933:463026..463088TCONS_00011213-exon-sc0000122-1510915933:463026..463088Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1575043694:463026..463088TCONS_00011213-exon-sc0000122-1575043694:463026..463088Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1491911889:463576..463722TCONS_00011213-exon-sc0000122-1491911889:463576..463722Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1510915933:463576..463722TCONS_00011213-exon-sc0000122-1510915933:463576..463722Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1575043694:463576..463722TCONS_00011213-exon-sc0000122-1575043694:463576..463722Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1491911889:463947..464022TCONS_00011213-exon-sc0000122-1491911889:463947..464022Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1510915933:463947..464022TCONS_00011213-exon-sc0000122-1510915933:463947..464022Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1575043694:463947..464022TCONS_00011213-exon-sc0000122-1575043694:463947..464022Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1491911889:465153..465210TCONS_00011213-exon-sc0000122-1491911889:465153..465210Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1510915933:465153..465210TCONS_00011213-exon-sc0000122-1510915933:465153..465210Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1575043694:465153..465210TCONS_00011213-exon-sc0000122-1575043694:465153..465210Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1491911889:465536..465580TCONS_00011213-exon-sc0000122-1491911889:465536..465580Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1510915933:465536..465580TCONS_00011213-exon-sc0000122-1510915933:465536..465580Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1575043694:465536..465580TCONS_00011213-exon-sc0000122-1575043694:465536..465580Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1491911889:466178..466222TCONS_00011213-exon-sc0000122-1491911889:466178..466222Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1510915933:466178..466222TCONS_00011213-exon-sc0000122-1510915933:466178..466222Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1575043694:466178..466222TCONS_00011213-exon-sc0000122-1575043694:466178..466222Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1491911889:469328..469435TCONS_00011213-exon-sc0000122-1491911889:469328..469435Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1510915933:469328..469435TCONS_00011213-exon-sc0000122-1510915933:469328..469435Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1575043694:469328..469435TCONS_00011213-exon-sc0000122-1575043694:469328..469435Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1491911889:472033..473056TCONS_00011213-exon-sc0000122-1491911889:472033..473056Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1510915933:472033..473056TCONS_00011213-exon-sc0000122-1510915933:472033..473056Clytia hemisphaericaexon
TCONS_00011213-exon-sc0000122-1575043694:472033..473056TCONS_00011213-exon-sc0000122-1575043694:472033..473056Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:462403..473056 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.04006	1.19537	1.49511	2.92741	6.21655	4.53068	5.12975	4.47988	3.078	2.11649	0.592279	2.09271	1.20558	0.529625	1.11207	0.941453	1.42741	1.54083	1.53194	1.80623	1.8377	0.901761	1.54933	0.778131	48.7577	41.8567	0.974737	0.618158	0.467213	0.765683
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011213 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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