TCONS_00011203 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011203
Unique NameTCONS_00011203
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1803

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011203 ID=TCONS_00011203|Name=TCONS_00011203|organism=Clytia hemisphaerica|type=transcript|length=1803bp
agaaaattgtaaaccgaacaaagagcggttcttagaggcccatgtgctcg
cacggtggcctgcgaacttgtatagcgttattattattattattattatt
taactCTCATTTTAGATATAACTTTATAAAcaaattctatttttccttgC
TTGGTTGTAAGACTAATATGACATGATGAAATGGCTGCACTTATTGCACC
AAGACCAAATTCGCATCCCTTTCAAGAAAGGCAGCTATCACTCAAGGAAC
CAATAAAGATTGGAAGAGCAGTTGCAAAGGCCAAAGCAACACAAAATAAT
GGCATCTTCGATTGTCGTGTTCTTTCCCGAAACCATGCTATGCTCTGGTA
TGAAAATGGAAAGTTCTTCCTCCAAGATACAAAAAGCAGCAATGGAACAT
TTGTCAATGGCGTTCGATTGAGCCGTGGGGCTGAGGAAAGTGAGCCCTGT
GAAATCAAGTCTGGTGATATTTTACAATTCGGTGTTGAAGttgttgaaaa
tacaaaaaatgtGACACACGGATGCATCATAGGGCTTGCAACGCTTTTTC
ATGAAGATGGAACTGAAGCAACTGGgGCAAATGAGGAACCCCAAAGTGTA
CTATCCTTGGCCTCTGGTGATAAACCTATCCAACCAAAAGAACTGTGGCA
ATTATCCCAGTTTCTTCAGGATGCCTTACATCGTGAGCAGATGCTTGAAA
ACAAACTAGCAACTTTGCAAAGAATGATTTCCAATTCTCATGCAGCATCA
GACGACACATTCCAGGGCTTCATACAAGAGGATAAAGTCTTATCAAGGCT
GGAAACTCTGGAGAATCAATTGGAACTCGTCTCACAGGAATTGCCAGAGG
ATGAGCCTCAAACACAACTCATGGCATATCAAGATGAAAGACTTGAATAC
GAATCAGCTGCTAAGGAAACGCTGCAGAAAATCCTACAAGAGAAGATAGA
AGTACTACAGAAATGCTCTGATCTTGAGCGACTTTTGAGTAACACAGAGG
ACGAATGCACATTTTTACGAAACACttgggaaaaatcaaaagaagaatTA
GGGACGTTAATGGAAAGACACACACAGCTAATGGACGAGTTGAAACAAGT
CAAAGAGGATATGACCTCAGCTGAACAAAAACATGAAGCTACCCAACAAC
AGACGATATCAGAAAAGAAAGAACTTAAAGGTCAATTAGAAGATGCAGAA
AAACGTGGAAGCTCTTTAGCTGTAGAGGTGGAATCACTGCAAGCTGAATG
TGATTTTACAAAGCAACAGCTACAAGCCATGAAAGAACGTCTGGAGACAA
AGcagaaggaagaagaagaagaaaCTGAAAAGCATGATCTTCCTTTTGCA
TCAGACCATGCAACTTTGGAAAAAGATGTCAAGAATAAAACAGCTTTGAT
CCGATCTTTAAAAGAACAAATAGCAGAAATGCAAGCAAAATATGAAATGG
AACAACTCAATAAGTCAACAGATGACAAGAATGATGATTTCAACGAACAT
TTAGAGATCAGCTGCACACAAATCAAAGAGCTAGAAGGTGTTCTTCAGTC
GGTTGCCGTTACGTTGAATACATGGTCTGATGGGTTGATGGCAGGTGTGG
AAACCAGTACATCATTTCATTACAGCGAAATCCAAACCacaacaaatcaa
aacaagGAAGacTGTATTGTCAATCAACAAAAAGCCATTATGGCGTGCTC
GGAATTCCTTAATAATGTAAAGAaacaTTTCGAAGACGTTATCGCTAGAG
CACCAATAGAACGAGAGCTCAGTCACAATTCAACCGATGAATCGATTAAA
GGT
Run BLAST on NCBI

transcript from alignment at sc0000122:451166..462054+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011203 ID=TCONS_00011203|Name=TCONS_00011203|organism=Clytia hemisphaerica|type=transcript|length=10889bp|location=Sequence derived from alignment at sc0000122:451166..462054+ (Clytia hemisphaerica)
agaaaattgtaaaccgaacaaagagcggttcttagaggcccatgtgctcg
cacggtggcctgcgaacttgtatagcgttattattattattattattatt
taactCTCATTTTAGATATAACTTTATAAAcaaattctatttttccttgC
TTGGTTGTAAGACTAATATGACATGATGAAATGGCTGCACTTATTGCACC
AAGACCAAATTCGCATCCCTTTCAAGAAAGGCAGCTATCACTCAAGGAAC
CAATAAAGATTGGAAGAGCAGTTGCAAAGGCCAAAGCAACACAAAATAAT
GGCATCTTCGATTGTCGTGTTCTTTCCCGAAACCATGCTATGCTCTGGTA
TGAAAATGGAAAGGTAAGGCACCCTTATCTTGATGATGATGCAAGAATTT
AAGGAAATCCAGAGTAACCGATAGCCCTTGAAAACtcattgaaaaatttg
tttttaattcaaCCTCCCAAACTNGTAGCCCTTGAAAACTcattaaaaat
ttgtttttaattcaaCCTCCCATACTGTACTCCATGCCTTAATTTGAAGA
AGGAAACAATCTCTAAATATTGTGTAGTTTTCCAGGAATTTGGAAGGTAA
TGCAGGAGTAAATTGGACCATGTAAAATCACATtttgaaaaagcttttaa
atCAATCTTGTGCTTTGTTTTTCATAGTTCTTCCTCCAAGATACAAAAAG
CAGCAATGGAACATTTGTCAATGGCGTTCGATTGAGCCGTGGGGCTGAGG
AAAGTGAGCCCTGTGAAATCAAGTCTGGTGATATTTTACAATTCGGTGTT
GAAGttgttgaaaatacaaaaaatggtATGTCTACACTTTGAAACAACAC
ATTTATGTTATGCTCAATATTGATCTCATGTCCTGGTAACAACTCTGATA
GGAGACCTAGTCTATTGTAATTGAATATTATTCATTGTTAATCAGCTTTC
CTAAAATTTCAACATAATGTATTCCTGTTACAAAATTCAGTTTATAGACA
GGTATGAATTTGAAAGCATATTAGTATTATTTACTGCTCCATAACGATTT
CTTATCAATGTTCATTTTCACCATAGATCATAGCATTGCATTTAGATCTc
tatttctttaattttagtGACACACGGATGCATCATAGGGCTTGCAACGC
TTTTTCATGAAGATGGAACTGAAGCAACTGGGTACACTTTTGAAGTTTTG
ATAAAGTCTTTTTGCTAATGTTACTTGCCGAAATATCGTtgtaaatttat
aaaaaaattcctaTAAACTGTTTTATTGActgttatatttttttgaatga
aaaaataaagacaCTATATCAAGAATCGACCTTCTCCGGCAAAAGCAGAA
TCTTTATTATACTATGCTTgaacattgaatttttttttctttattcaggG
CAAATGAGGAACCCCAAAGTGTACTATCCTTGGCCTCTGTAAGTATAAAG
ATATTGGCAAGTATCATGATCATTTTCAGGGAAATCTTGTCATAAGCACT
GCAAAATCTTATTTTATAGAATTAATTGAAGTTCTCTTTATTTTTAGGGT
GATAAACCTATCCAACCAAAAGAACTGTGGCAATTATCCCAGTTTCTTCA
GGTAATCTTGTTGTCTGAGTAAAGTTTTCTTCACATAATTTCTTTGCTTC
TTAATTTTCATTGAACACTTGTATAACAAAACAccatttcaaaaacaaaa
ttttacacggttataaaattttttgaatttggtgTTGGTGAGAGTGCTTC
AAGTCCTCTTTACTTGGTGGATTGACATTTGTTTATAACATACAATCAGT
AAATTAATTTTGAACATTCTTTTAATCGTAAGattatttaatattttatt
tatttctaggcAAACTTGAAAAAGGCATTTAAGAGGTCGAAATATCGTTT
CAAAAAAAtgtgttatgttttattttgatttggtcACAAGGCTCTTTCTT
TATGTTTGACTTATTTATTTCTAGGATGCCTTACATCGTGAGCAGATGCT
TGAAAACAAACTAGCAACTTTGCAAAGAATGATTTCCAATTCTCATGCAG
CATCAGACGACACATTCCAGGTTAACTAATTTCTACAGTTTTTGAGATAC
TTTCCCATTCCACCATTATTACGCAGTGAAATCCTTAGCTTTTTTGTGGC
TGTTATACAGGGCGTTCTAGTATCATTTGGTGTCCTCAACAGTGGTTATT
ACGACATTATTATGACAgaacctttttgttttgtttggttgCTTCTGTAA
tatacaataaattttgattcttcttgaaacttctttttcatttgtaGGGC
TTCATACAAGAGGATAAAGTCTTATCAAGGCTGGAAACTCTGGAGAATCA
ATTGGAACTCGTCTCACAGGTACGAAGGTTTTGGTATCAAGAATAAACTA
CAACACAATAAATCGTTTCAATAATATCATTATAGAAATGGACGTTTAAT
ATGGAGCTTAATTAACCCTTTATGTGAACAGTTTAACTTTATCTTGTCGA
CTTTTCAGGAATTGCCAGAGGATGAGCCTCAAACACAACTCATGGCATAT
CAAGATGAAAGACTTGAATACGAATCAGCTGCTAAGGTTTGTATTTGTCT
CTCACTTTCTTCTACAGAAGATGTcttgaattgtttttacttgttTTTGT
TTGTGATTATAAACGTCTTAAACGTcttaagaaattattttttttaaatt
ttttaattgagTTCTTCTggttaaaaattgaatattcttatagatgGTAA
TAGATCTTATATAATTCTTATGGACAAATTTTAATATATCAAGTTGAAAT
GTAAACTTTTCAGGAAACGCTGCAGAAAATCCTACAAGAGAAGATAGAAG
TACTACAGAAATGCTCTGATCTTGAGGTAAAGTCATAATTGTCGGAAGTC
AGTCAGTGTATTAATTACCTGTTTCTGAGATTCCATCAAGTTATCGTTGC
TACCTTTTGTATATCTTTAATACAAGTTGGGAAAAGATTCACTTCAAAAA
TTTATAACTTCGAATATTTTAACAGTGTTTGGTTAACAACCAACACTAag
catttaaatatttttgccaGCCTTATattgaatacaattttttcttcaGC
GACTTTTGAGTAACACAGAGGACGAATGCACATTTTTACGAAACACttgg
gaaaaatcaaaagaagaatTAGGGACGTTAATGGAAAGACACACACAGGT
TTTatgtttttctcaaatttcatatCTTCAAATTTCGTATCTTCAAATGt
caTATCTTCAAATGTCAATTGGAATtctaacttttaatttttttgacttt
agtAGAATTGGAATAGAATTGGAATAGAATTTAACCCCTCCTAttaattt
tccttttcatttttctcctccaAAAGCAATGAAACTGTGAATCGGTTTTC
ACCATAAAGTTTGAAAGCTTTCTGAGTGACCATCTAAAAATTTATTGTCT
TTTCACTGCAGCTAATGGACGAGTTGAAACAAGTCAAAGAGGATATGACC
TCAGCTGAACAAAAACATGAAGCTACCCAACAACAGGTCTGTTTTGCATT
CATCCAAGCGTCTATCAGTTTCAGAAAATTGCTCTGTATAAATTTATTTG
TTCACCAAAAGTCAATAATAATAGCCCTAACTACCTTCAGCAGTCCAATG
CTTCCTGGACCAGATAAAATATGAAGGATAATCTAATCTTGAAAATAACC
TCCATACCTTCTGAAAACAACCCCTTGTTTATATTTCCTATCTTGTAACC
AGCATAAGTAATCAATCCTATCAATATCTTTCATCTCAATATCTTTCATA
GACGATATCAGAAAAGAAAGAACTTAAAGGTCAATTAGAAGATGCAGAAA
AACGTGGAAGCTCTTTAGCTGTAGAGGTAATTGGAACCCAAATGATTCTT
AGTAGGTCAGGTTCTAAGGTGTCACAAGTATAGTGTTCCAATACCTTCAC
TCGAGCGTtgtatgaaattttgagtctctAATTAATGGTTTTTATCACTA
TTTTTCTATCCTATGGGCATCAATCACTGTTGCAGGGTCTATTCAGAGTC
AGctctgttttactttattcaaTTACTCTTAACCTTCCTCTAGTATTCTA
ACAAGTTCAtgtcctttttggacctaccttaaggtagtgtcctataaatt
aacccgtgttcgttagttagttcgttagtacgttagttaccaacttttct
cgagattggctcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttttcaac
ttatttaattgtttctttacagaaaaatgttctttatgatgatgcccaaa
acttagcattgtttgatttccaaaaaaatcatcctttgaatcaggaactc
cttaaaaatcgccggaacaggcgaaaaccattttttcaacttatactcga
cagatatactttcaccgttaaacatcgatgcgtttcttaattgctttctc
cgttccaatagatatataaatcgaaatttaaaattatacattacttccat
taaattctaattattcgttttataaataggtaggtccattaaagtattac
ttgttatTTATATAAATGACAAAcccattgaaaaaagaaattgcacTTCT
TCACTTCAGGTGGAATCACTGCAAGCTGAATGTGATTTTACAAAGCAACA
GCTACAAGCCATGAAAGGTATATTTCATCACATTGTGTTTGAAAATCTCT
ACATACAAATTGACTACAAAGTTAAGGAACGTTGCCTTTTAACCTAGTCC
AGTACCTCTGGGAATATTACTTAGTGCTTTTAAACAAGGATAAAGACCAT
TGTTTTTGCTCTGTAGTATTTTTTGTAATAGTTGCTAGTAAGTGTTTATG
GAAATACGAAAACAATCAATCACGataaccaaatattttaatatcATTTT
TTCACCAGAACGTCTGGAGACAAAGcagaaggaagaagaagaaggttTGT
GTATTTCAATTTCTCCTTGCATTAAAGGATTCTAATCATTAGCTTAGCTC
AAAAGGTTAGATGTGCCCATCTAAAATACCAGACACAGCAACCTTTTGCC
AACCTTTATGCTGTCAGTCTCTGCATCATCGAGTTTGAGTAGACCTCTCC
TCTACTAGTATATAGTTCTCCTCCGTAATGTATTTTATAATTATGTATTA
CGTTGGTCTTGTCCTTTGTGAATTTAAATGTTTTACAAGTGCGATTATTG
AACTGAATGTATGCTGCAAGGACTGTCGAGTTGAAGTGACATGTTTGAGT
GTTTTAGTAATTATAAGCTTTCCATGTCTATGCTAACTTACTTGCATATT
CTGAAAAGTGTCTGTTTCATTTTCAGTGTGCTTGTTTaggttttttcttt
ttggttaatgattttgtttttgtaggttttaaagggacattaaagtagta
aaatgtaaacattgcgcgaaccacgtgtcatcaaagagaacaattaaaat
cacgtgtccaaaacaaacttgtaaaacaattgaacaatcaaaattagcca
tatttagtttgattttttattttgacatgtgacatttgttttgattttgt
attcgCTGCatatacagtttgtttacaaatttcgcaagtactgttatgtc
cctttaaagtttGTTTGTTCTTAGACGTAGTTTATTAGATTTTAACATTT
TATTCTTGCACAGTAACATTGTAGTATTTTATCGCTTAGCAATTCACCAT
TTTGTTATAACATAATTGAATTCAGTCCGCTTATGACAGCAAGAGGAAGA
TTCAAACCGCATCGAGACTGCATGAAATAGATTTTCTTCACAATATACTT
CTAGAGGCTCAGATATAAGACAGATGACATCTATGGAGAGTTTGTTTTCC
CAGTTTATGGAGATTCATTCCAAACgacaattcaaaaaattttgaagaat
tcgATAGTTGTTGAATCAAGTTGTTGAGAGACAGGCATACATACTTTAAA
TAGGGATATCGAAGTGATGGACCATTTGAGCAATTGGAGAAAGCCAAGAA
TGTTAGCAGACCTTGAGGTGAGATAGCTGAACAGTTTGCAGAGTTACCCT
TAAAAAAGGCCAGCAGTGCAACATACCAAGACAATCTACTAGAAAGGATG
GCAAACAAGTCATCAAGTCATTCGAGACAAATCAGTTTCTAGTGAGAAAG
CCGGAAAGAGAGCAAGACTGGAAGTTTTATCCGCAAAAACTGAATTATAT
GTCCAAAGTATTCCAGCTATGAAGGCTCACCATCAAATGAAATTAAATCT
CAAGTCAAGTCTCAATAGATGATAGAAGTTTACGAAAACATCGAgcaaga
aaatgatttttaacCAGAATTTGAAAAGATCCCAGAATTCACAATTAGTG
GCTGGATACGTTGATACTTCTTATCAACTTCCAGAATTACTGAAAAACAT
TGTCaagaatatttatttatttttcttagaaaCTGAAAAGCATGATCTTC
CTTTTGCATCAGGTACATCATTAACATTATTTGCAAATTATAATTTGTAT
TTACACTTTTTAGCATTAGGGTATTATTGTGCTCTATAGATATGCTTATT
ACGTGTTTTTGTAATAAATGGTTTGAGAATCAGCATGCTTGTGTAATTTT
AAACAAATGTTTTACGAGTGTAATGCTCACCAAAAAAAGGCTAatatttt
attcaatattttaatttttgctcgTTAGGTACTGTTTTGGAAATTatatg
tatttttgaaaatggcaTTTCACAAGTCAATTATTAATTTTGTGCGATCT
GGTTTTATCTCGTCTTTATGCAAAGCTATGTCAAAACATAAACTTGTTTC
TTAACCTCGTGTTTATTATGGCTATTATTTAAACTCATTCATTTGTACTT
GTATTAGACCATGCAACTTTGGAAAAAGATGTCAAGAATAAAACAGCTTT
GATCCGATCTTTAAAAGGTAAGTGTTGATagtttccataattcgaacaac
AAGGGGTGTGGGACCAATAAGCGTTCGAGTTTCGGAGAGTGTAAAAGATG
TAAACTTGTGAAACGGAATAGCTTTCGAATCTCATAGGATCGAAAAAAAC
TTTCGCCATTGTATGGAGACGTCCTCAGTGATTTTAATTTCGGACTGGAG
AGAGAACTACCTGCCCCTCCAAGACTTCAACAACCTTAGTTGATCAATTT
NCTTTCGAATCTCATAGGATCTCATAGGATCTCATAAGATTTTAATTTCG
GACTGGAGAGAGAACTGCCTGCCCCTCCAAGACTTCAACAACCTTAGTTG
ATCAATTTATATCAGATAATACATTTTTGTACCGATTCTTTACTGGAATT
CGGAAATTTTCGGAGCTAAACATACACAATATCTTCTAACTTTCTCTCTT
AGAACAAATAGCAGAAATGCAAGCAAAATATGAAATGGAACAACTCAATA
AGTCAACAGGTAATTGTTTCTTGGCCTTTCTTACTATCTTGATGTCGTAA
GAATGGTATAGGAAGTAATCATTTTATCCTACTTATCAAGCTAGCAATTA
GACAATATAAAAATTCTGAATGCATGGCAAAAGGTTCTTTAAAAGTCTCT
CTATTGGGACTTTGTTTTGACTTCCAATAGAATCGAGTTTGCTTTACATT
TTCTttaattgttgtttttctttaatttccattttgaatttgaagctCTC
GTCATCTTTCAAATAGGAGAAGAgacaaaaaatgaaatcttATTGCTAAa
ttctgattttctttttttgttttccgCCATCAGCAGATGACAAGAATGAT
GATTTCAACGAACATTTAGAGATCAGCTGCACACAAATCAAAGAGCTAGA
CGGTNTAGACGACAAGAATGATGATTTCAACGAACATTTAGAGATCAGCT
GCACACAAATCAAAGAGCTAGAAGGTGAGGAAGCAGCTTCCAGAAGAATT
TCTTAATGAACGAAAACTTATGATCAAcaaaaaacattggaaaatatCAT
AGTTTCTTTTCATTGGTGGTCACTGATAGTTTGAAAGGATTTCTAGAAGA
CTCGTTGAAGTTTATTTATTGAAAAACCCTTTAAAAGCTTTTGTAAATAA
CAATAAGGTCTCAGAAAAGACTTATGGTGGCCTTTATTGGTTATGATTGT
AAAGGTATCTATGAGAGTCAAAGGTGTAATTGATAAATATGCTCTACATG
AAGATGCTATTTTGTTCGCTCAGAAACTCCCCAACTTCTTCACATTTCTT
TTCTTGTGTAGGTGTTCTTCAGTCGGTTGCCGTTACGTTGAATACATGGT
CTGATGGGTTGATGGCAGGTATGTGATATCGTTTGCTAGCATTTAAAGCC
TGCTGAATGGAAAACGAAACGAAATAGCTAGAACAGCAACCTCGAAGTTA
TCATAACTATTTACATAAATGTAACTGTGTCTGTAACTTATATATTACAC
ATATACTCAGGCGAGTGTTTGGGGAAAATGATCCTGTGTGTTAATGGAAA
AGACCTTATGGTGTTCCTGTATATTCACCTCACATTGAAAATATCCAAAA
CTTTGTGTTCATTTTTAGGTGTGGAAACCAGTACATCATTTCATTACAGC
GAAATCCAAACCacaacaaatcaaaacaagGAAGGTATCAAGGACAATAA
TTGTTTCTCTTCCATTTGAAGAATTGTTAGGATATTAGTCCATGTGCATT
TTGtcgggtcaagctggagtttttacaagttctttgatgcCTCTGTTGGt
cgcgtcatccctattgtttaaaaataaccaatcagttaagcatcttgtaa
aaactccagctcatcccattttgtcaatgaaaatcatttttgataatTCA
TTTTAATATAAAAGGACAAGATCAGTTTTACAGGAacattttatttcttt
tgtttagacTGTATTGTCAATCAACAAAAAGCCATTATGGCGTGCTCGGA
ATTCCTTAATAATGTAAAGAGTGagttataatttcttaggtaTCATATAA
TTTTATAAGTTTGTGTGATTTCTTTCGCGAGGGGAAAGAACATGTATGCG
AGTATTTACTCCATTtggttttgattatttttctttactttctgTCTTCA
ATAGAATTGTTGGGATAAGTTTATTAATGAAAGTCTACAACTAAAGTCGG
TGGTGACCCGACTCGAAGGCTTATCTTTTGATGTctatctacctgaaggt
aggAGAAGGCGCctcagattttttttctgtctGCGGACGCAGACCTGAAT
TAGCAGTCAcagacctgatttagcggccgaagacctggatTAAAAACCGA
AGACTTGATGCAGCGGTCGAATACCTTTTTTAACGACCGAAGACCTGGAT
AAAATGAATTGTGTAAATTtgttataaatcttttttataaattcaatcaa
gatttttataTGGTTTCAATGGGAAATAGTATCGAaaacaaataaagtta
aaagattttaaactaaaaagaaTGAATATTAATGCCAATAACTCGTCTCG
AACTACCCAACTTTCGTCTTGGATACCACTGCACTAACCACTGGACCATC
GCAACTGGTGCTTTACCGAGTGGTTCAAGCTAGTTTAACTGACCCTAACT
ATTCGGCTGGTGACTTACTAAATCCGGTCTTCGGCCGTTGATTCAGATCT
TCGGCCGTtgattcaggtcttcggccgttgatTCAGGTCTTCGACCGCTA
AAATTAGGTCTGCGTCCGCTGACGGAAAAAACGTTTGCGAGGGAGCCctt
ctttctccctggattccTCCACTCACCCTGATACAAAATCAATGGAATAA
GCATCACAACCCTCAATACTTTTTGCTTTTCGTAACCGATTTAATAaatc
atattttctttttcagaacaTTTCGAAGACGTTATCGCTAGAGCACCAAT
AGGTGaaatattgttttaattttcaataactcTGTAAAGCTTTTAATATG
ATGTTAGTGTGATAGCAGTATAACCGGACACGTGGAATATTGAATCTAAA
CTAAAGTCTACATATAAACACGGCCTAACTATACAAATCAAAAGAGTGTG
TAAAATAAGGACCGTATGATAATAAAGATATCACAAGATTGTTTATCCTT
GTCAAAATATTGAAGCCATTGTATTAATTATATTGATTATTGATTAACAA
CTTTTCCCCAGTTTTAATATTGTATTCTTTTCCCTCTTTTTACAGAACGA
GAGCTCAGTCACAATTCAACCGATGAATCGATTAAAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006277XLOC_006277Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011203-exon-sc0000122-1491911889:451166..451528TCONS_00011203-exon-sc0000122-1491911889:451166..451528Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:451166..451528TCONS_00011203-exon-sc0000122-1510915933:451166..451528Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:451166..451528TCONS_00011203-exon-sc0000122-1575043694:451166..451528Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:451843..451990TCONS_00011203-exon-sc0000122-1491911889:451843..451990Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:451843..451990TCONS_00011203-exon-sc0000122-1510915933:451843..451990Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:451843..451990TCONS_00011203-exon-sc0000122-1575043694:451843..451990Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:452283..452346TCONS_00011203-exon-sc0000122-1491911889:452283..452346Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:452283..452346TCONS_00011203-exon-sc0000122-1510915933:452283..452346Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:452283..452346TCONS_00011203-exon-sc0000122-1575043694:452283..452346Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:452564..452603TCONS_00011203-exon-sc0000122-1491911889:452564..452603Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:452564..452603TCONS_00011203-exon-sc0000122-1510915933:452564..452603Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:452564..452603TCONS_00011203-exon-sc0000122-1575043694:452564..452603Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:452713..452766TCONS_00011203-exon-sc0000122-1491911889:452713..452766Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:452713..452766TCONS_00011203-exon-sc0000122-1510915933:452713..452766Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:452713..452766TCONS_00011203-exon-sc0000122-1575043694:452713..452766Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:453140..453235TCONS_00011203-exon-sc0000122-1491911889:453140..453235Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:453140..453235TCONS_00011203-exon-sc0000122-1510915933:453140..453235Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:453140..453235TCONS_00011203-exon-sc0000122-1575043694:453140..453235Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:453463..453534TCONS_00011203-exon-sc0000122-1491911889:453463..453534Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:453463..453534TCONS_00011203-exon-sc0000122-1510915933:453463..453534Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:453463..453534TCONS_00011203-exon-sc0000122-1575043694:453463..453534Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:453674..453751TCONS_00011203-exon-sc0000122-1491911889:453674..453751Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:453674..453751TCONS_00011203-exon-sc0000122-1510915933:453674..453751Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:453674..453751TCONS_00011203-exon-sc0000122-1575043694:453674..453751Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:453979..454041TCONS_00011203-exon-sc0000122-1491911889:453979..454041Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:453979..454041TCONS_00011203-exon-sc0000122-1510915933:453979..454041Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:453979..454041TCONS_00011203-exon-sc0000122-1575043694:453979..454041Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:454265..454363TCONS_00011203-exon-sc0000122-1491911889:454265..454363Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:454265..454363TCONS_00011203-exon-sc0000122-1510915933:454265..454363Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:454265..454363TCONS_00011203-exon-sc0000122-1575043694:454265..454363Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:454627..454701TCONS_00011203-exon-sc0000122-1491911889:454627..454701Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:454627..454701TCONS_00011203-exon-sc0000122-1510915933:454627..454701Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:454627..454701TCONS_00011203-exon-sc0000122-1575043694:454627..454701Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:454967..455041TCONS_00011203-exon-sc0000122-1491911889:454967..455041Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:454967..455041TCONS_00011203-exon-sc0000122-1510915933:454967..455041Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:454967..455041TCONS_00011203-exon-sc0000122-1575043694:454967..455041Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:456475..456532TCONS_00011203-exon-sc0000122-1491911889:456475..456532Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:456475..456532TCONS_00011203-exon-sc0000122-1510915933:456475..456532Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:456475..456532TCONS_00011203-exon-sc0000122-1575043694:456475..456532Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:456774..456809TCONS_00011203-exon-sc0000122-1491911889:456774..456809Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:456774..456809TCONS_00011203-exon-sc0000122-1510915933:456774..456809Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:456774..456809TCONS_00011203-exon-sc0000122-1575043694:456774..456809Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:458295..458327TCONS_00011203-exon-sc0000122-1491911889:458295..458327Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:458295..458327TCONS_00011203-exon-sc0000122-1510915933:458295..458327Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:458295..458327TCONS_00011203-exon-sc0000122-1575043694:458295..458327Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:458723..458782TCONS_00011203-exon-sc0000122-1491911889:458723..458782Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:458723..458782TCONS_00011203-exon-sc0000122-1510915933:458723..458782Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:458723..458782TCONS_00011203-exon-sc0000122-1575043694:458723..458782Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:459218..459274TCONS_00011203-exon-sc0000122-1491911889:459218..459274Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:459218..459274TCONS_00011203-exon-sc0000122-1510915933:459218..459274Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:459218..459274TCONS_00011203-exon-sc0000122-1575043694:459218..459274Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:459602..459628TCONS_00011203-exon-sc0000122-1491911889:459602..459628Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:459602..459628TCONS_00011203-exon-sc0000122-1510915933:459602..459628Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:459602..459628TCONS_00011203-exon-sc0000122-1575043694:459602..459628Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:459701..459739TCONS_00011203-exon-sc0000122-1491911889:459701..459739Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:459701..459739TCONS_00011203-exon-sc0000122-1510915933:459701..459739Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:459701..459739TCONS_00011203-exon-sc0000122-1575043694:459701..459739Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:460077..460133TCONS_00011203-exon-sc0000122-1491911889:460077..460133Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:460077..460133TCONS_00011203-exon-sc0000122-1510915933:460077..460133Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:460077..460133TCONS_00011203-exon-sc0000122-1575043694:460077..460133Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:460384..460449TCONS_00011203-exon-sc0000122-1491911889:460384..460449Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:460384..460449TCONS_00011203-exon-sc0000122-1510915933:460384..460449Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:460384..460449TCONS_00011203-exon-sc0000122-1575043694:460384..460449Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:460723..460785TCONS_00011203-exon-sc0000122-1491911889:460723..460785Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:460723..460785TCONS_00011203-exon-sc0000122-1510915933:460723..460785Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:460723..460785TCONS_00011203-exon-sc0000122-1575043694:460723..460785Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:461682..461717TCONS_00011203-exon-sc0000122-1491911889:461682..461717Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:461682..461717TCONS_00011203-exon-sc0000122-1510915933:461682..461717Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:461682..461717TCONS_00011203-exon-sc0000122-1575043694:461682..461717Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1491911889:462011..462054TCONS_00011203-exon-sc0000122-1491911889:462011..462054Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1510915933:462011..462054TCONS_00011203-exon-sc0000122-1510915933:462011..462054Clytia hemisphaericaexon
TCONS_00011203-exon-sc0000122-1575043694:462011..462054TCONS_00011203-exon-sc0000122-1575043694:462011..462054Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122supercontigsc0000122:451166..462054 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.4924	27.1754	25.8854	34.9031	36.3328	19.5026	39.4267	38.7543	26.114	21.2028	19.257	17.9037	14.0181	14.1427	13.4286	18.4806	19.8038	18.3703	9.98652	12.437	5.34036	11.6818	7.42886	14.8506	32.3768	33.4549	4.15112	4.52894	9.19322	8.72526
Blast
[Close]
BLAST of TCONS_00011203 vs. Swiss-Prot (Human)
Match: SLMAP (Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP PE=1 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 2.130e-121
Identity = 190/372 (51.08%), Postives = 271/372 (72.85%), Query Frame = 1 
Query:  187 ALIAPRPNSHPFQERQLSLKEPIKIGRAVAKAKATQNNGIFDCRVLSRNHAMLWYEN--GKFFLQDTKSSNGTFVNGVRLSRGAEESEPCEIKSGDILQFGVEVVENTKNVTHGCIIGLATLFHEDGTEATGANEE-----PQSVLSLASGDKPIQPKELWQLSQFLQDALHREQMLENKLATLQRMISNSHAASDDTFQGFIQEDKVLSRLETLENQLELVSQELPEDEPQTQLMAYQDERLEYESAAKETLQKILQEKIEVLQKCSDLERLLSNTEDECTFLRNTWEKSKEELGTLMERHTQLMDELKQVKEDMTSAEQKHEATQQQTISEKKELKGQLEDAEKRGSSLAVEVESLQAECDFTKQQLQAM 1281
            A+   RPNSHPFQER + L EPIKIGR+VA+ +  QNN  FDC+VLSRNHA++W+++  GKF+LQDTKSSNGTF+N  RLSRG+EES PCEI SGDI+QFGV+V ENT+ VTHGCI+    LF  DG EA   ++      P  V  +A+    +  +EL+QLSQ+LQ+ALHREQMLE KLATLQR+++ +  ASD ++Q  I ED++LSRLE + NQL+  S+   ED  + +L+A Q+++  YE+ AKE+L+++LQEKIEV++K S++ER LSNTEDECT L+   E+++EEL  L  ++   ++E+K + + +  AE K E  QQ+  +EKKEL+ ++++ E++   L  ++E+LQA+ DFT ++L A+
Sbjct:    6 AIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTAL 377
The following BLAST results are available for this feature:
BLAST of TCONS_00011203 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SLMAP2.130e-12151.08Sarcolemmal membrane-associated protein OS=Homo sa... [more]
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