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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011175 ID=TCONS_00011175|Name=TCONS_00011175|organism=Clytia hemisphaerica|type=transcript|length=1091bp
GTGAAAATGGATGAAAATAAGAATTGGCAAGAATTTATTCACCAAAACCT
CCTTAAAAATGGCTTCATAGACGGTTTCTTACTCTTTTCTCTCGACCTGG
AACTAGTCCATCAATATGGGGAATTATCGAAAATGGACCAATCAGAATTT
AGGAAATTTCAACAAGTATTTGATCATGTTCATGACGAAAGTTCCAGAGC
ATCATTATTACAAAGAGGATTACACCTCAATGTCGATGAACAAGATGATG
TTAAATTTGTGATTCGACATTTACAAAATAATTGTGTATCGTGTGTGACC
AAGCATAACCGTATTGGTGTGGTGATAATGAAATTTCAATTTGGTATCAT
CGTGGCTTCACATTCTTATCCAATCACATCACATGTAGCtttgaatcaag
ttcaagatttGGTGGTTATGTTATGCTCTTAACGGTTGTTGGCTGGAGAG
GTGGAGAAATGCTTAACTTGATTTTGAAAAGATCGGCTGAGTAGAAAATA
AATCATTGAGCTGGAAATTCTGTCGATTTTTCAGACGAATCTCGTCTTGA
CTGCCTGGTGCATTGGCGTGATAGTTGACTTCTATTTAAAACACCTTACT
GATACGAAAATAGCCATCGGTTTGTTTACATGGTGGTTATATCATTTACT
TGAATGGTTTTATGGCTGTAATTGTTTTTGGTTGTAATTGAATGAAAGCC
ACAGGTATCTTGGGTAAAACGCTAGATTGAGCTACTCTTTCCTGCTGAAG
CACAATAATGTACCCTCTTTAAAAGAAGATCACGGTTCGatgccggcaat
ttgatcaaccaTTTTCTCGCCATGTCAGTTGTTTCTTCATATTGATCAAA
GttgccggtaccgaactgtgGTCTAACTACAAAAggcaaagatggcgcat
tattattttgctttaaatgTAGTGGCTAAAGAAAGAGTATGCCTTTCACT
ATCGAAGGCTTGGATGCAAGAATTTAGAATGttcatttctcatttttttt
ggaacggtttttttatttttaccaaattttcatttaatttttttttagtc
caacttttttttcggTAGCTCTTAGTGATTTCAGTTACGAC Run BLAST on NCBI transcript from alignment at sc0000122:120153..121243+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011175 ID=TCONS_00011175|Name=TCONS_00011175|organism=Clytia hemisphaerica|type=transcript|length=1091bp|location=Sequence derived from alignment at sc0000122:120153..121243+ (Clytia hemisphaerica)
GTGAAAATGGATGAAAATAAGAATTGGCAAGAATTTATTCACCAAAACCT
CCTTAAAAATGGCTTCATAGACGGTTTCTTACTCTTTTCTCTCGACCTGG
AACTAGTCCATCAATATGGGGAATTATCGAAAATGGACCAATCAGAATTT
AGGAAATTTCAACAAGTATTTGATCATGTTCATGACGAAAGTTCCAGAGC
ATCATTATTACAAAGAGGATTACACCTCAATGTCGATGAACAAGATGATG
TTAAATTTGTGATTCGACATTTACAAAATAATTGTGTATCGTGTGTGACC
AAGCATAACCGTATTGGTGTGGTGATAATGAAATTTCAATTTGGTATCAT
CGTGGCTTCACATTCTTATCCAATCACATCACATGTAGCtttgaatcaag
ttcaagatttGGTGGTTATGTTATGCTCTTAACGGTTGTTGGCTGGAGAG
GTGGAGAAATGCTTAACTTGATTTTGAAAAGATCGGCTGAGTAGAAAATA
AATCATTGAGCTGGAAATTCTGTCGATTTTTCAGACGAATCTCGTCTTGA
CTGCCTGGTGCATTGGCGTGATAGTTGACTTCTATTTAAAACACCTTACT
GATACGAAAATAGCCATCGGTTTGTTTACATGGTGGTTATATCATTTACT
TGAATGGTTTTATGGCTGTAATTGTTTTTGGTTGTAATTGAATGAAAGCC
ACAGGTATCTTGGGTAAAACGCTAGATTGAGCTACTCTTTCCTGCTGAAG
CACAATAATGTACCCTCTTTAAAAGAAGATCACGGTTCGatgccggcaat
ttgatcaaccaTTTTCTCGCCATGTCAGTTGTTTCTTCATATTGATCAAA
GttgccggtaccgaactgtgGTCTAACTACAAAAggcaaagatggcgcat
tattattttgctttaaatgTAGTGGCTAAAGAAAGAGTATGCCTTTCACT
ATCGAAGGCTTGGATGCAAGAATTTAGAATGttcatttctcatttttttt
ggaacggtttttttatttttaccaaattttcatttaatttttttttagtc
caacttttttttcggTAGCTCTTAGTGATTTCAGTTACGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011175-exon-sc0000122-1491911889:120153..121243 | TCONS_00011175-exon-sc0000122-1491911889:120153..121243 | Clytia hemisphaerica | exon |
| TCONS_00011175-exon-sc0000122-1510915933:120153..121243 | TCONS_00011175-exon-sc0000122-1510915933:120153..121243 | Clytia hemisphaerica | exon |
| TCONS_00011175-exon-sc0000122-1575043694:120153..121243 | TCONS_00011175-exon-sc0000122-1575043694:120153..121243 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122 | supercontig | sc0000122:120153..121243 + |
Blast
The following BLAST results are available for this feature:
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