TCONS_00011080 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011080
Unique NameTCONS_00011080
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011080 ID=TCONS_00011080|Name=TCONS_00011080|organism=Clytia hemisphaerica|type=transcript|length=2186bp
TTGATCGAGAGTCATCTTATGTTGTCAacATCCGGGGAAAATCTAAAGCA
TCAGTAACACAATATCAAaccaaatccaaaaagaaacCAACCAACAAACA
CATAACCATTTGCTAGTAGAAACCACTCCATCTCTTACGAAGGCCAAATC
ATGGCAATGTTAGCAGCAAGTATCCAAgaactggtttccatcaagatcAA
GCCAAGACATGATGGAATCACTGATCAATACAATCGTATTTTCATGGTCA
AGATATGTTTGATTTGCGCTGCTATCATTGGTGTGAATTACTTCAGTGAT
AAAGTATCGTGTATTGTGGCAAATGGGAATGGTATGGATGGTGCGTTTGT
TGGAAGTGCTTGCTGGATTCAAgGTTTTTATGTGTTTGACGAGATGAGAG
ATCGACTTGATGAATCTGGATACTATGGTATCCCAAAGAATATGGATTAT
GATGGCATCAATCCTCTTGGTCAGTTATGCTCCACTGTTGATCGTGCCTT
GGACAAAGTGACCGAATGTCAACCCATGCAAAGGTTGTATTATCTTCAAT
ACCAATACATGCCTTTCTTCACTGCATCTTTggctttctttttctatttg
cCTTACATTTTGTTCAAGACGGTCAACTTCGATATCATCAGTTTGCGAGA
TGAGATTAAAGATGGTGAAATGTCTGCTGATAAGATCTTCACCAGTTATT
TTGACCGTATCGTGAACAACCGACGTCGCATGCGATACAAGTCCATCTTG
AATATCATAATCAAGCTTATGTACTTGATCGCGAACGTCCTCGCATTCGA
AGCCTGCGATTCAATCCTGCACGGTGACTTCCGTAGCTACGGAACCGAGT
TTGCTAAATGGGTCAAATATGAGAATTTCGAACGCCACGACCATAACCTG
AAAGTGCGTGCTGTTCCAAAACCAGGCAACATTCTGCTTCCACCAATGGG
GTTCTGTGATATCCATGAAGCATCGCGTGATGTTCGAAACACGCACATTA
ACACGCATCGCTTCATATGTGAGATTTCGCCGCACGTTTTATACCAATAT
GTTATGTTGGTTTTCTGGTTTCTCCTGGTGATTGGTATCGTCATCTCCAT
CCTTGGTTTCTTCCAACACATTATGGTGCACATTGCAAGCTATATCCAAA
TGAATCGCCATGACCCTACTGGTAAACTCTACCGAGTTTTAACCTTGAGA
GAGATTGACTACCTTGATATCCTACGATTGAAAAGCACATCTCAATATGG
TACAGTCTTGAAGAAGATCAGAGAGGATCGGTTAGATCATGTCGTTGATG
AAACAGAGAAACTATACCCAGGCAAAGATACCATGTTTTAAAGCAAGCAG
AACATATTTTAAAGTCCGTCCATTTTCATCTACATAATCGTTGACGATTT
TTAATGagattcttttttctttccactattgggctgttccattagaAACC
GTACAGGGGGtaggacgaaccttttcaagttagaaaaaattattgtaaat
attgaaaatggcaaaatttgcaaaaatatcctttgaaaaattattttcat
accttaaaatgagggtggacgaactaaaatcccCTGGAAATCTTAGAATA
ACTTCTTACCCCCTAGGaaaaataccccctggaaagtttttatggatata
aaatggaatggcccattttttACGATGAGAATACTAGTACAacaattgta
aaaaaaaacagtatcTAGATGAAAGTGGACCGACTATGATTTAAAAGGGC
CAGATTTTGAACATTCAAGCAAACTGTCCTCGATAAAATTGCAGTGATTG
TGCAAACCTTTAAAGATTTCTAAACTTAACTACTGTAATGCTTCATGTCT
TGGGTAGATTATATTTTTGTGGACTATGTAAATTCTCTGTGAAAATCAAC
TCATGTCCCTTAGATAATATCATACTTAGtgaatttttctcgaaaattgg
gAACCTAAATACCCTGTGTTGATTAATTTTTGTAATGTATCTAAAATTAA
GATTAAAAAtgccaatttttttcagttatttttcattgcttAGCTTTTTT
CATCTACTTTAATGACCAAAAAGAATCACTGTATGAATTGTAAACATATC
TTTTGTAACTATCATatctattttttgataatttaccattttttttaCCG
TACACTTTTTGActctttgattaaaaaaaaaacaac
Run BLAST on NCBI

transcript from alignment at sc0000121:137395..152261+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011080 ID=TCONS_00011080|Name=TCONS_00011080|organism=Clytia hemisphaerica|type=transcript|length=14867bp|location=Sequence derived from alignment at sc0000121:137395..152261+ (Clytia hemisphaerica)
TTGATCGAGAGTCATCTTATGTTGTCAGTAAGTATAATGATATATGTCTT
TTGCTTCGTTGCTTCACAAATGCTGGATTGCCAGATATTTAAAAATGTGT
CACGTAAAAACCAAGAGAGTGCTagatttaaagtctattcacgataagtg
tgcactcttttttcatttacctataacttttgaaggaattcttcaatttt
tataaatttggtatcattggaaagatgttagtgagtggaacaatttgaaa
ttaaaaaatctttaaaaaaattataaaaatgaagatgaaaataaaNNNNN
NNNNNNNNNNNNNNNNNNNNNctccttgattatcgaacattatcactgtg
aaaaaatttctcaaaaataatcattcagtcaaaagatatcaagcaaagtt
ataagctgattgacgtctaaaagcggtgttttctgctgttttttgctgtt
ttttggggtcaatcacttatcaactttgtatcataactttttaatgaata
tatattttagtaaaactttttcacagtgatgatctcctaagaccaaagaa
tctctccagtgaaaatgaaagttatagcacttttctacaagatcttcatt
tttttcttcttcattttcatgttcatttttagaattctttNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNctccaacgataccaaatttataaagattgaaga
attccttcaaaagttataggtgaaagaaaaaagagtgcacacttatcgtg
aacagactttaatcaTTCATCTGAAATGTGGCGCAAATTTTAAGGCGCAA
ATTTTTCTTGCGTGACAAAGGTTATGGATAGATTCCTCTCTAGTCTTCAG
CTAACgataaaaaatcattattttcattGGCTACTTTGGGCCATGATATT
TACAAAATCTAACATATATTTAACATGATGACGTACCTTAAATGGGTTAA
ATTTTGGTGtggattaaatttggcaaataataaaatatactgaaaaattc
gcaaaattaaatccccgccaaattaaacaaaaagaatattacGTAAAAAA
TAACAACTTTTCAGTATATTTTATAGTAAATTTTACCCATTTAAGTGTCT
CAAAATTTGcatttcgccaaattaaatccccgtcaaaaatcgtattttgg
ccaatcgctaaattaaatccacgccaaaatttatccacttaagtaAGGTA
TTCaatcaagaaaaaatgaatTCTTAGGCTTAACACCATTTTCGGACTGC
TTTAAGGATGGCGAACCGAATCTACCGCTTTTTGTTTTCACAATGcatat
tattttgaaatctaacgatggtttttatttcaatcgggcgttttagatgg
gaaataagttaGTTAGTTTCAAACTATTGCCCCCTTTTCGAgcctttaaa
ctcaatggtagaTAATGTTAACtataacattaaaataaaacgaTGTTggt
atttcattttttagacATCCGGGGAAAATCTAAAGCATCAGTAACACAAT
ATCAAaccaaatccaaaaagaaacCAACCAACAAACACATAACCATTTGC
TAGTAGAAACCACTCCATCTCTTACGAAGGCCAAATCATGGCAATGTTAG
CAGCAAGTATCCAAgaactggtttccatcaagatcAAGCCAAGACATGAT
GGAATCACTGATCAATACAATCGTATTTTCATGGTCAAGATATGTTTGAT
TTGCGCTGCTATCATTGGTGTGAATTACTTCAGTGATAAAGTATCGTGTA
TTGTGGCAAATGGGAATGGTATGGATGGTGCGTTTGTTGGAAGTGCTTGC
TGGATTCAAggtacacgtctttttttataagtaagAGTGTCTATCCCTTA
ATCAAGCTTGCATTATCCTCAGCATTATATTGCTCTTAAACAATAGAgtc
attgtttaggtaccaaaaactgagccagcatatgcttataaacagTAGAT
GAAAAAACATGTCCACGTTGTTTTATACAAGAACAAATTACATCGAGACA
AAAAGTTTCGAGgttaagaaatttaaaattgtaAGAGCATCtaaaggctt
tatggactctaaaatttgataaaaatagtcacaaaattttgagaattagA
AAACTTTCTAAGAATTTGGAGgttccaaaacaaaaaatttgcaCATAATC
CATTGCACCAAATATGTTCATTTATCATCTAAATTTCCACATCAACTATT
TATAAATTCCCTTCATTTTATTTAGGATTCTACATTTTCGAGGAAATGAA
GACTCGATTGGATCAATCAGGGTATTACGGTATCCCACGCAACATGGATT
ATGACGGCATCAATCCTCTCGGTCAACTTTGCACCACAAGTGATCGTGCA
TTGGACCCTGTAGAGCAATGTACTCCCATGGAGAAAGTGTTCTATCTTCA
ATACCAGTATATGCCATTCTTCGTTGCATCACTGGCTTTATTGTTTTACG
TGCCTTATTTGGCGTTCACTTTCACCAACGCAGATCTGGTGTTGCTCAAG
GATTACCTCAAGGCTGGAAGTGTAGATTCAGATGATTTGTTGAAGAAATT
CTTTGATCAGAAAAAGAATCGACGTAAAAAGATGAGATATCGTGTGTTCT
CATTGTTGCTGGTCAAACTGATGTATCTGCTGGTCAACGTTGTGGCGCTG
TTAGCTTGCCACGTCCTGCTTCATCACAAATTTCTGACCTATGGTCGTGA
TTATCTGCAATGGACGGACTTGGATCACAATTTGGCACACGAGCACAATT
TGAGAGAACGTCATAGTCCTAAACCAGGAAATGCGTTACTTCCTCCCATG
GGCCTTTGCGAGATCCATGAAGCATCGCGCGACGTACGCAACACACATGT
CAATCAACATAAGTTCATTTGTGAAGTCTCGCCCCACGTGTTGTATCAAT
ACGTCTTATTGGTCCTTTGGTTCGGCCTTGTAATCGGCATCGTAGTCTCA
GTCATCGGTGTCCTAATGAATCTCTTTGGACATCTCCTCAATTTTGCCTG
CTTCATGAGCTCATCCGACCCTGCACGCCGTATGTACCGCGCGATCACGT
TGAGAGAGATTGATTATCTGGAGTATATACGCCGTAACAACATGCCGATC
TACGTGGAGCTTCTACGTAAGATCAGAGATGCCAGATCTATCACTTTTAA
AGGCAAAGAGAAATACGGATACACCGGTGTTGAACTTTAAATGATGAAAA
ACTTTCTTGGATTTTCGTCTTGTCTCATGTCAATCTTTCAATGATATGTG
GACACCCTCTTAAAAGAATTCCGTGAACTTCCTGTATAGACCAAAAGCTA
ACTAAGTTAATTTTTGGTTATAATTTGGAGATTACCTCCATGGTTCGTCC
AATCCTGTGATTAATCTTATGATTTCAATTTGTTTGGCTGATTGTACAGC
TTTGGTAATTCTTTACTAAGTCAATAGCCTCGTGAAATTAATTTGTTTTG
CTATCGACTACAGTACCTAAAAAGAATTTATCCTCAAATACCATTTTTCA
CATCCCAAAGACTATCATAAGAACTTTTTTCAGATGTAACGTATTTcagt
ttttatgaaaaaaaaagtcaaaattcttCACTTTCTTAGTTTTTGATTGT
ATTTCAACAATTTGAACAACTTTTATTTGCTTGTAAATATTGTGactttc
tgagaaaaaaaatcttacattCTCCCCCAAAACAACTCTTAATATAACTT
TAACCCAGCCAGCGAGCTGTAATAATCATCACGGTTCGCTGCTTTAACTT
TGGCATCTTTTTGGCTTTTACTTTGGAGTCTCCATAAGCACAGATTATTC
CTGTAAACTTTGAACAAAATAAGATGATTTCAAAACGAAATTCGGGTTAC
AAGAGATTTTCGCCCTTCTTCATACCTGATGTGACGCTTtttcgcttttt
tttataaacggTTTGATTGGTTTGGTTTTTTCAACAAGTTTTCCATTTCG
AGATTATCTGTAATGGTGCTCATAGAAACCAAGATGGGAGTCACCGTCCG
AAATTatataattttgaatttatttttaaaaatcattgcCGTTTCATTTT
GTCGCCCGACACGAAAAATCTTACCGACAAAGTTGGCGTGTGTAGTAAAG
CCGACTTAAGCTTACACCAAATGGGTActcctttttctcaaatatttaaG
GCTTTGCCGGCTTTATAACGTAAAAACATTATGATATATTTTGGCTAGCA
GCATAAAACCTTTTCTAATCAGACATTTAAGCTTTGTTTTGTCGTTGCtg
tcaaaaaatattacttttcagCGATTGATTTTtctaataatttgattttt
cgaaaaaatggtaaaaatacaACCGACAAAACAGCCATCTTTCAGTCTTA
CCGTTCAGTTTTACCCCCACCTCAGCCTCAATCAGCACTCTGGTGGGGTT
TAAAATAATAAGTGCAATGACATTTCTGAGAAACGCCTTTTTTtgggaat
tatttttttttgaagttagATCTCCTGGAAGACAATTGTTTTggagctgc
cccccccccgggcattgCGGAGGGGGATCTCCTGGAAGGTATTGTTGCCA
TTGTAATTCTTTGGTCGACATAAGCTTAGAATAAGTTGAGCCCTGTatta
tcatttgaaataatttttgatgttttgttgATGCCATAGATAAGTCAATG
ATTCATTTGAAGTCTTTTCACCTAACCTAACGCTAACGACTTTGACTGGT
taaagaatacacgtttttttttattagaacacctaaaatttggctgagcc
tggatgtgcttattttttagcaattttcagcctaaaatgttcttaaatgc
gtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagttaaaactgc
ttgaaaagaggaaaaaattgtagtttcttgtcatttttttccaaactgag
gctgggcatgttcttacgatgttcttaatttttcgacaagTTTCAgtctc
aatgttcttataaactaggttctaacaaaaaaaaaacgtgtagatagAGT
GTACATTAATTCCACTGAGCTTCATATAAACCCTGGAGTCAGTCACCTTG
TCATCAATGATGGCAGATAAAGCTTTGTCCAgagtatataaaggtcagtt
aCCAATTAAGACATCTGGTGACATCATCATGTTTAAAAAAGTGgacgaat
acacgtttttttaagaacatccaaaatttttgaagcctttagatgttctt
aacatattgcTTTCGccatttttagagtatttttgtccattttgctGTGA
AATTCTGTGttctagagtccgcaaagccttaaaatgttctaaacattttg
gctatcgaagccttatgttcttatatagtttgttcttattaaaataaaaa
cgtaTAGGACTCGAGTCAGATCATGCTTGTGACTCATTATATGACTCAga
gatttaaaaaacaaacaccCCTCAGCTACGGTTTGTTCACACACACACCC
TTACTAAGAGAAGATATAGTTGATCTTTTGTCTTTCGTTTGTTAATCTTG
ATTTATTAGTTATCTCTAAGTCACCTGAGAAAGTTTTCGATGAAATAATT
TCGTAAAGAGCTACTGTCCTGCTAAAAATATGAAAGAAGTGGAATTctca
aaaacaataaattcaaaataacttttggcgaaatatcaaatttttctaaa
aactcGAAACAAGAATATATTTACCAGTACATCGTTTTAAACTGGTGTAA
TAAGGCTAACTATATAATACAAATTTACAGAGTTAAAAATGTTTGGGTCA
aatatttacagttaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTGGTGT
GACAATATCTTCTGCTGGAAGGCTAGATGCTGGCATAATGTTTTCCTGAG
CTTGACTCTGAACACTACGAGAAACCTCATTTTGTGATTGTGGTAttctt
tttttgcactttgGAAGGTGTTCTAAATAGTATCGTTCAATCTTGTATTT
TTTGTTGCAGTCCTTACAAGAAAATTTGTATCCACTTACATTTTGACTCA
TGGTTTCTCGATTCTTGTGTTTTCTGATTGTATACAAAGAGCTCGTGTTT
TTTTGGTTTGTTCAAGGCCCAATTTCTCCTACCTCTCCCTTGCCAAAAAG
AGCTAATTGTAACAGATACCTCTCTTGTGTCTAGAAGTTGATAAATCTTT
TGGTTGTATTCACTCTTCTGGTGATATTCCATTGACTTTTTCCAAACCAA
GACAAATAATCATAAAAAATTCACTAAGATAcgtccgccattttgttttc
attgtggatggaaatatcaaatttttgcgTTTTCGTCCTGAAAGCTAAAA
GCttggaaaaaataaactttatgtGAATTTTCACCAGTAATGaagttgat
aaaaaagttgtaaGAGAGCGACCCCCTTACAAGGACATTTTTAAAGatct
tgaattttgaaaacatGGGATACTTAAACTTGTGAGAAATGTCGGTTAAT
TTTATTCTTTGTGGCTTTATTTCGAATATTTAATACCATTGCCATAATTC
TAGTCTAGTCTTAGATGtaaaagttagttttttattttaatgctCAGTTT
AGACAAAGTAAATGCGTTAATTCTTCTTAAAAATCGTATGCTAATTCTTA
TGTCGgtattttgatttcaaagttATCAAACCTAAGcattttgctttaaa
tttaatgtgatttcaaaaactttaagcTTGCCTAAAATTAAGACCAATTT
TACGTTGTGATCGGCCAGCTGGTTCAAACCCCCTTAAAATCCTCAAAGGA
ACGTTTGTATTATTATAAACTTAGACTGACGCACCGAGTTGCTCTTTCAT
ACTCaattttgacacctttttctaaATCTCTTCTTAGCACTTTCTAGCAT
ATTAGGGATAAGCCGTCATCTTAAACACTTGCGTCAGCAAAATATATAAT
TTGTAAATTtcgtttgaaaaattgaaaagtttttttttagatGACGGGCT
TATTTGTCccaatatttttgtcatgtgatttttgactgattttgatgaat
ttttataATAGTCCTGTCCAGAAAATCTTCAATGAcagtgataattttgt
gaatAGGCCGTttaaattttcataatctgCATTTGTTATACCTTAGGTAG
TAAGATTTTCTCTTGATCGACCACACCCTTTTGCAAACATAATGCGAACA
TGATTTCCAAATTTTAAtaatcgggggggggggggttatttAGAATATGA
GCTGTCGAATATTCTTATTAATAAAGCCCttgtgttttgtgtttgttttt
ttttttttttcaaaagggggggggggggggctcattcagaatatgagctg
tCGAATATTCTTATTAATTAATGCCTTAGTGTTTAGGtttgcttcatttt
ttattgttaataTCTCTGTCCGTTTACTTTCGTTTTAGCTCAGcaagaaa
taagaatttaagAAACTATAATAAATGGAACATGGAAAATTTGGCTTTTA
TTTCAAGGCTGATATGGTTTTGGACTTGAGTTTAATTCATGGTTTTGATT
CTTATGGAAATTCGTGGTTCTCAAAAAGCAGCGCTggttttatttaattt
ggtcTTGAATAGGGTTGTTTTAATTGTGAGAAAAGAAACTGGTCTGTATC
AAAATGTTTAAATATCATGAACACAGTTGAATGTCATTGAAGGTTGACAA
AGCTGTCCGTATATGGTCATACAATCCGATTATCAAACTGAGAAAGAGTC
AAAAAGAACAATACAATGATTCTGACTTAAGGTAAGAAGGTTTTTTATTA
TTGTGAGTGCGTATACTCTCTCTTTTTCacatcatcaaaaattttcgctg
TCGTTTGAGTGttgtaaaaattaaatttattttggtagatcgttatcttt
attttgataatgGTATTTGGTGTGACGGGGTTTTAGGGAAGTAGCTGGGG
TATAAGTTTTGACAATGATATGAAATAGTGACGCTTGAAAAATTACCTAG
GCCTTTTTCACATGTGTTTTAAGACTTAAACTTCTTCTCAAACTCACTTT
GCAGAATCTTATTCATTTGTTCGCGATTAGATTATAGTTAGTTGAAATTT
TTTCGGATTTGCAAAATTATTGTTTCATACGAAATTATAGatgactctcg
cttattcgattctttctttaattcgaacttattcacAACCCCCGTCTAGA
AGAAACTCAATATACGAGTTCAAATTAGCAAGAGTCAATTGTAGATAAGA
ATCTAGCCATTTTCTTTAACTGCGAAAAATTTTGTAATCTTGATTCTAAG
ACATAGCCTTATACACGTTTGCCAGGCTTATATTTTAGAACGCAAAGTCA
TTCTTGTGTGCCAAACTTGTGGTGATCTCCACCTTAAAAaggtttcgcgc
gaacaaaaaaaagttgaaggaagctCAACCTTTTTCAACCGTTACTTCAA
TCTCGACCAATGAAATTACTTCTTTCTttaaccgaccaatgaccttacaa
aaacgttgaaaagtttttgctcatttcgcacgaaagtggagaccggcctt
taagcGATAAATGATGGGTGCACGAATGACGTCAATGCTTAAGAAGTCGG
CGTTGATCTCGTTGCAATGCATTATcttctcaaaatatttgaagcacTGA
TTTCAAGAAATGTTCACTCAGCGCTCAAAGCGTCATCATGATTTTGTTTC
TACTTCGTTTTTATAATCTAAGAAAtctttgaaataataaaattcaatcA
ACATTGTAAGAAGACCAGCAAGCAATACCACCATCGCCAGCCAAGAGATT
CTGCAGTACCTTGAAGAGGACCACGAAACAGAATCACCATGTCTCTATTA
GGAGAGAGTATCTCAGCTCTGGTGGCGATCAAGATCAAGCGACGTTATGA
TACCTTTACTGATCAATACAATCGAATCTTCATGGTGAAAATGACCATAT
TGTTTTCAGCTTTCATTGGATTCAACTATTTCCAGGATAAAGTGTCGTGT
ATTGTGGCCAATGTCAATGGCATGGATGGTGGGTTTGTTGGAAGTGCTTG
CTGGATTCAAGGTATACTGTctttgataagttttgatatgttaACCAAGC
TCTAGGTTCTTTTGCATAAGAATTACTTGTACCGTTTTATTGTTACTCAA
TGAGTGGAGTTGGATATTTGGGTAAAATCAGGCTGCtgacatccactaac
ggattcgtgttCCTTATATACTACCCACGTCTTTGTAGAGgtttgcgatt
cagactatggGTAAATGTATTAGATTCTGTGTTATATACCTCTCAAGGTT
TTGATTGGTAGCCACGTGTAAATGAAATGGTCTTAACAACGGTCAATATg
cgtttattttttattagctTGTGCTAATCTTAAAATTCTCTCTGATAGAT
TTGGTAAGAATTATTCTAATTCCGAAATAGGTGCCATTTTTGACTTTACT
ACATTTCAGGTTTTTATGTGTTNNNNNNNNNNNNNNNGATACCTTTACTG
ATCAATACAATCGAATCTTCATGGTGAAAATGACCATATTGTTTTCAGCT
TTCATTGGATTCAACTATTTCCAGGATAAAGTGTCGTGTATTGTGGCCAA
TGTCAATGGCATGGATGGTGGGTTTGTTGGAAGTGCTTGCTGGATTCAAG
GTATACTGTctttgataagttttgatatgttaACCAAGCTCTAGGTTCTT
TTGCATAAGAATTACTTGTACCGTTTTATTGTTACTCAATGAGTGGAGTT
GGATATTTGGGTAAAATCAGGCTGCtgacatccactaacggattcgtgct
ccttatatacTACCCACGTCTTTGTAGAGgtttgcgattcagactatggG
TAAATGTATTAGATTCTGTGTTATATACCTCTCAAGGTTTTGATTGGTAG
CCACGTGTAAATGAAATGGTCTTAACAACGGTCAATATgcgtttattttt
tattagctTGTGCTAATCTTAAAATTGTCTCTGATTTATATAGATTTGGT
AAGAATTATTCTAATTCCGAAATAGGTGCCATTTTTGACTTTACTACATT
TCAGGTTTTTATGTGTTTGACGAGATGAGAGATCGACTTGATGAATCTGG
ATACTATGGTATCCCAAAGAATATGGATTATGATGGCATCAATCCTCTTG
GTCAGTTATGCTCCACTGTTGATCGTGCCTTGGACAAAGTGACCGAATGT
CAACCCATGCAAAGGTTGTATTATCTTCAATACCAATACATGCCTTTCTT
CACTGCATCTTTggctttctttttctatttgcCTTACATTTTGTTCAAGA
CGGTCAACTTCGATATCATCAGTTTGCGAGATGAGATTAAAGATGGTGAA
ATGTCTGCTGATAAGATCTTCACCAGTTATTTTGACCGTATCGTGAACAA
CCGACGTCGCATGCGATACAAGTCCATCTTGAATATCATAATCAAGCTTA
TGTACTTGATCGCGAACGTCCTCGCATTCGAAGCCTGCGATTCAATCCTG
CACGGTGACTTCCGTAGCTACGGAACCGAGTTTGCTAAATGGGTCAAATA
TGAGAATTTCGAACGCCACGACCATAACCTGAAAGTGCGTGCTGTTCCAA
AACCAGGCAACATTCTGCTTCCACCAATGGGGTTCTGTGATATCCATGAA
GCATCGCGTGATGTTCGAAACACGCACATTAACACGCATCGCTTCATATG
TGAGATTTCGCCGCACGTTTTATACCAATATGTTATGTTGGTTTTCTGGT
TTCTCCTGGTGATTGGTATCGTCATCTCCATCCTTGGTTTCTTCCAACAC
ATTATGGTGCACATTGCAAGCTATATCCAAATGAATCGCCATGACCCTAC
TGGTAAACTCTACCGAGTTTTAACCTTGAGAGAGATTGACTACCTTGATA
TCCTACGATTGAAAAGCACATCTCAATATGGTACAGTCTTGAAGAAGATC
AGAGAGGATCGGTTAGATCATGTCGTTGATGAAACAGAGAAACTATACCC
AGGCAAAGATACCATGTTTTAAAGCAAGCAGAACATATTTTAAAGTCCGT
CCATTTTCATCTACATAATCGTTGACGATTTTTAATGagattcttttttc
tttccactattgggctgttccattagaAACCGTACAGGGGGtaggacgaa
ccttttcaagttagaaaaaattattgtaaatattgaaaatggcaaaattt
gcaaaaatatcctttgaaaaattattttcataccttaaaatgagggtgga
cgaactaaaatcccCTGGAAATCTTAGAATAACTTCTTACCCCCTAGGaa
aaataccccctggaaagtttttatggatataaaatggaatggcccatttt
ttACGATGAGAATACTAGTACAacaattgtaaaaaaaaacagtatcTAGA
TGAAAGTGGACCGACTATGATTTAAAAGGGCCAGATTTTGAACATTCAAG
CAAACTGTCCTCGATAAAATTGCAGTGATTGTGCAAACCTTTAAAGATTT
CTAAACTTAACTACTGTAATGCTTCATGTCTTGGGTAGATTATATTTTTG
TGGACTATGTAAATTCTCTGTGAAAATCAACTCATGTCCCTTAGATAATA
TCATACTTAGtgaatttttctcgaaaattgggAACCTAAATACCCTGTGT
TGATTAATTTTTGTAATGTATCTAAAATTAAGATTAAAAAtgccaatttt
tttcagttatttttcattgcttAGCTTTTTTCATCTACTTTAATGACCAA
AAAGAATCACTGTATGAATTGTAAACATATCTTTTGTAACTATCATatct
attttttgataatttaccattttttttaCCGTACACTTTTTGActctttg
attaaaaaaaaaacaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006209XLOC_006209Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011080-exon-sc0000121-1491911889:137395..137421TCONS_00011080-exon-sc0000121-1491911889:137395..137421Clytia hemisphaericaexon
TCONS_00011080-exon-sc0000121-1510915933:137395..137421TCONS_00011080-exon-sc0000121-1510915933:137395..137421Clytia hemisphaericaexon
TCONS_00011080-exon-sc0000121-1575043694:137395..137421TCONS_00011080-exon-sc0000121-1575043694:137395..137421Clytia hemisphaericaexon
TCONS_00011080-exon-sc0000121-1491911889:139009..139354TCONS_00011080-exon-sc0000121-1491911889:139009..139354Clytia hemisphaericaexon
TCONS_00011080-exon-sc0000121-1510915933:139009..139354TCONS_00011080-exon-sc0000121-1510915933:139009..139354Clytia hemisphaericaexon
TCONS_00011080-exon-sc0000121-1575043694:139009..139354TCONS_00011080-exon-sc0000121-1575043694:139009..139354Clytia hemisphaericaexon
TCONS_00011080-exon-sc0000121-1491911889:150449..152261TCONS_00011080-exon-sc0000121-1491911889:150449..152261Clytia hemisphaericaexon
TCONS_00011080-exon-sc0000121-1510915933:150449..152261TCONS_00011080-exon-sc0000121-1510915933:150449..152261Clytia hemisphaericaexon
TCONS_00011080-exon-sc0000121-1575043694:150449..152261TCONS_00011080-exon-sc0000121-1575043694:150449..152261Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121supercontigsc0000121:137395..152261 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0075807	0.210148	0.148731	0.0352671	0.0125204	0	0.081538	0.049948	0.0185835	0.0235908	5.03776e-08	0.0155567	0.0270196	0	0.0117546	7.03145e-09	4.47837	2.52441	0	0	3.86463	8.73442	5.22769	4.40322	0	0	0.104264	0.119114	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011080 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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