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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011060 ID=TCONS_00011060|Name=TCONS_00011060|organism=Clytia hemisphaerica|type=transcript|length=1123bp
AAGACCGGGTTTTATTTATTCCGCTGTTAAATATAAATAAAGTCAACAGT
AACTCAAGTTATTTAAAACGATATTTTTAGCAAACATCAAATTTCACTTG
ACTTGTATAAAACACCCATTTGTCCACAGCGAtggctttttgctgatttg
atCCCGATTTCATTGAAACTACAAAAGTACATGTATTTAAAGTACACTGA
AAGTCCCTATTGGAGAAATACaggaatcaaaacaaaattctcataatgca
aaaaataaaacttgaaacagGATTTCACTATGAACATTTTGCTCTCTCGT
TTATACTTCTATAACACCCATGTTTAACACAGCCCCGGCGGAACTTCACC
CAAAACAACAGGGTTGAAATTCTCTATCGAACTTGGATTTGAATTCTAAA
TTGTTCTCTTGTAAATTCTGTTGCGGGAGTCgagacacaggggtgtttta
aaaaGACCGTTATCTTTATTTGAAAGTCGAAAAGTTTATGGGATTCCGAA
AAAAAATACTCAGAACTTAGCAGCGGTAGGTCCcgcgaaaaataagaaaa
tatctAATGAAATATAATGAGACAGTCtgaaaaagttcttataaaggTTA
AAACGTGTTTGTTTCACCAATTCACTCTTTCACCCTCCCATCATGTGTTt
ttaaaaagtcataaaaaggCATGTGCAAAAACTAATGATCGGTTGACGAG
TTTGATTATCCACACTTCCATCGCACGCCAAGAAaattaatgaccaatta
agcgcAATTCGAATCGTTATGTCGTTAATTTCTCGGCTCACACGAATTTG
TCTCTTGGTTTTTTTCAACAAATGGCACTTCAAgtacaatgtttttgttt
tgaaatagcGCAGCATACAGTCATGATGGTAGATCGTTGGAGTGACGGCA
AATCATTACGAAGTTTAACATTTTACGAAGTTGACCTTTCTGAAATTGAG
ATCATGTTTCTTTCATGATGACTTGGCTGATTCACTTGGAATGTTTGTTT
TctgaaaaacaataacacaaaTGTTATGTACAGTAAGTTTGGTTGATCTA
TTTTTCATGTTCctcgagaaataaagaaaaaacttgaaaatctgtccgaa
gtttccccgacctacggtacccc Run BLAST on NCBI transcript from alignment at sc0000119:358748..359870 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011060 ID=TCONS_00011060|Name=TCONS_00011060|organism=Clytia hemisphaerica|type=transcript|length=1123bp|location=Sequence derived from alignment at sc0000119:358748..359870 (Clytia hemisphaerica)
ggggtaccgtaggtcggggaaacttcggacagattttcaagttttttctt
tatttctcgagGAACATGAAAAATAGATCAACCAAACTTACTGTACATAA
CAtttgtgttattgtttttcagAAAACAAACATTCCAAGTGAATCAGCCA
AGTCATCATGAAAGAAACATGATCTCAATTTCAGAAAGGTCAACTTCGTA
AAATGTTAAACTTCGTAATGATTTGCCGTCACTCCAACGATCTACCATCA
TGACTGTATGCTGCgctatttcaaaacaaaaacattgtacTTGAAGTGCC
ATTTGTTGAAAAAAACCAAGAGACAAATTCGTGTGAGCCGAGAAATTAAC
GACATAACGATTCGAATTgcgcttaattggtcattaattTTCTTGGCGTG
CGATGGAAGTGTGGATAATCAAACTCGTCAACCGATCATTAGTTTTTGCA
CATGcctttttatgactttttaaaAACACATGATGGGAGGGTGAAAGAGT
GAATTGGTGAAACAAACACGTTTTAAcctttataagaactttttcaGACT
GTCTCATTATATTTCATTagatattttcttatttttcgcgGGACCTACCG
CTGCTAAGTTCTGAGTATTTTTTTTCGGAATCCCATAAACTTTTCGACTT
TCAAATAAAGATAACGGTCtttttaaaacacccctgtgtctcGACTCCCG
CAACAGAATTTACAAGAGAACAATTTAGAATTCAAATCCAAGTTCGATAG
AGAATTTCAACCCTGTTGTTTTGGGTGAAGTTCCGCCGGGGCTGTGTTAA
ACATGGGTGTTATAGAAGTATAAACGAGAGAGCAAAATGTTCATAGTGAA
ATCctgtttcaagttttattttttgcattatgagaattttgttttgattc
ctGTATTTCTCCAATAGGGACTTTCAGTGTACTTTAAATACATGTACTTT
TGTAGTTTCAATGAAATCGGGatcaaatcagcaaaaagccaTCGCTGTGG
ACAAATGGGTGTTTTATACAAGTCAAGTGAAATTTGATGTTTGCTAAAAA
TATCGTTTTAAATAACTTGAGTTACTGTTGACTTTATTTATATTTAACAG
CGGAATAAATAAAACCCGGTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011060-exon-sc0000119-1491911889:358748..359870 | TCONS_00011060-exon-sc0000119-1491911889:358748..359870 | Clytia hemisphaerica | exon |
| TCONS_00011060-exon-sc0000119-1510915933:358748..359870 | TCONS_00011060-exon-sc0000119-1510915933:358748..359870 | Clytia hemisphaerica | exon |
| TCONS_00011060-exon-sc0000119-1575043694:358748..359870 | TCONS_00011060-exon-sc0000119-1575043694:358748..359870 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000119 | supercontig | sc0000119:358748..359870 . |
Blast
The following BLAST results are available for this feature:
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