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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00011046 ID=TCONS_00011046|Name=TCONS_00011046|organism=Clytia hemisphaerica|type=transcript|length=2242bp
AAAGATTTGACTGTTGTGAAGACTTTCGGATAGTTAGCCGTAAATACTTT
CATTTTCTAACGCCTTCTCCCGCCAAAAAAATTACTGGCGTTATTGGCTT
TTTCgcttttttgtttgaatttacCATGACTCAAAACCACCCccaaactt
cttggaaaaaCCAATCTGATAAATCAACAGCAGTCCAGTCCAGATcatgt
ttaaaatttgaagAGGCATGACAGACGAGGAGGAGCCAAAACCTTTAATC
AAAGCAAAAGATCATAAATATCCTGGATATGAACAAGAAAGCAACAAGGA
ATGGAAAGAGAATTTCTATTTCATACAAGCAGCTGACACTCAATTTGGTT
TGATCGACGATTGGGCGAATGTACCTGTTGAAAAACAAACTTGGGATGAA
GACATTAGACTTACCGAGTTGGCAATTAAACATGCAAACACATTAAAtcc
aaaaccaaaatttttcattgtatGTGGAGATATGATTAATGCAGGGCCTG
GTCAGATATACCGTGGTGAAcaagaaaatgattttaaaaggattttcgag
cAGCTTGATTCAGACATCCCACTTGTTTGTGTTTGCGGGAACCATGATAT
TGGGAATAGCCCGACAGTTGAAACGGTGGCAACTTATCGAAATATGTTTG
GGGATGATTATTTCTCCTTTTGGATTGATGGTGTTTTATTTCTGGCATTA
AATTCACAATACTATGAAGACCACTCTCAAGTGGAAGATGAATATACACA
ACAAGAATTATGGCTTGATCAACAACTTGAAGTGGTCAAACTAAAACAAT
GTCAACATTGTGTTGTGTTTCAACACATCCCATGGTTTCTTAAGGACGCT
AATGAGGAAAAAGACTATTTTAACATTGAAATTAATACTCGTTTGCGAAT
GTTGAATAAATTACGCGATGCTGGTGTGCGCCATATTTTTTGTGGTCATT
ACCATCGCAACGCTGGTGGTTTCTATGGTGATTTAGAATTAGTTGTGACG
TCAGCTGTTGGCTGTCAGATAGGGAAGGATGTGTCTGGTATGAGACTTGT
AAAAATTACCAAGGAcaaaattgaacataaatatTATGGAGTTGAAGACG
AAAACTTTCCCAAGACAATTGAACTGGATGGAGATTGTAAGTTGCCGTAA
AATGTTTTGTGTTGTGGGAATACTTTGTGGGCAGAAAGTTATGAATTCAC
TATGTTCTTGTTTAATTTTTGGCGTGATGCTTATTACATTAGCTAGTAGA
GCTTTTCAGgcaggtccattcagcatctagcttgttctcGATGTCCCCAC
ATAAGAAACGGCTCAGGTATGCATCGTTAAGGTTTCATACTTTATTTTCT
TGTTGACTAAATCAAGACCAAATTTTACGCATTTTATAGGCTTTTCTAAC
CTTAACCTATACGGCTTTTGCTTGAGGTTTTTTTCTAACAGCGTATTTTC
AACTAAGCACGAAATTTTAAATAGAGGTTTATATATTGATTAATTTCTAT
TCTAATTGAGCGTGTAAAGTTTTTATTAGTAAGTAATATTTACAAAGTAT
ACTTTATTCAGATATTTATCGTAAAAGTATGATatattattataatatat
tttatttttctgtttttttactATGATCTACAAATTGTTCAACACTCGTT
TTAATGTTACAGCTCCTAAAGTAAGTTATTTCATTGATATGATATTAAAA
TGGAAAAACTCTACGTGACTAATGATTTGTAAGTCAGTTCAAAGCAAATT
AAGAAAAGTCTGCCACATGGTCATGGTTTAGTAGAGAAAACAAACTATTT
ATTCTTCTAAGTATCTGGCCGAGCCCTCGaccttaaaaacttttaaaaac
ttaatttttattttaccgacaGTCTTAGTATAAAAANCCTCgacattaaa
aacttttaaaaacttaatttttattttaccgacaATCTTAGTATAAAATG
TCTTTGGTAAAATAAGATGTTTCTTGCATTTATATTTGGTTCGGTAATGA
TTTTGTATATTGGAGAATTTTATGATATTATGTACAAATTATTGACTGAA
TAAGCAGCCATTTTTATTATTCTAGGCTAGGTAGGGTGTAGGAAAgtttt
tatattctttttacACGTATTTAATCACCTATGAAAGACATGTTTCATAT
TTAGTCTAGCAATCGAAGGACtttcttcttaaattttagTCTTTCAAAGT
AATTTTCTAATCGTTTCCTGATGGTGACAAATTCAAGGCtgg Run BLAST on NCBI transcript from alignment at sc0000119:393308..413753- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00011046 ID=TCONS_00011046|Name=TCONS_00011046|organism=Clytia hemisphaerica|type=transcript|length=20446bp|location=Sequence derived from alignment at sc0000119:393308..413753- (Clytia hemisphaerica)
AAAGATTTGACTGTTGTGAAGACTTTCGGATAGTTAGCCGTAAATACTTT
CATTTTCTAACGCCTTCTCCCGCCAAAAAAATTACTGGCGTTATTGGCTT
TTTCGCTTTTTTGTTTGAATTTACCATGACTCAAAACCACCCCCAAACTT
CTTGGAAAAACCAATCTGATAAATCAACAGCAGTCCAGTCCAGATCATGT
TTAAAATTTGAAGGTAAATGATATTTTTAACACAATATAACATTCAAGAA
AGATAGAAGTAAGGCTACTTTTAATCTATACTGTATTATTGGGGGATGCA
ATAAGTAAATGTATGTTAATGTTTGCTGGTTCATGAAAATAGGGTTAGTG
AGGAGTCCCCTGCCCAGTTGGCGACCGGTCTAGTTGGCGACCGAACGTCT
TTGAACCCAGAAAAGTCATGCAAAAACAAACCTCTTTAGAATTTCTTTTG
GTAGTAATCTGCCTTGACCTATTTCCCGTACTGTGTAAAAAAAGTTCTAG
AAAAGAACGAGTAGAAATCCGAAAGATCCAACTTTGCACAGAAGCACATG
AAAAACCCGGATTTTTCAAAAAAATAAAAAATGACTACCTGTGGACAAAA
AAGCTTCGCAAGAAAAAACGCTTCAACTCCCACTCCAAAAAATACTTGTC
CAAAACGATGAATATGTTAGAAAGCATTTCTGTAAAAATCAGCTCGATAC
AGTTTCCTTCGTTTGAAATATTGATAAAAAAGTTGATGCGATGCAATCAG
CTTTGAAATTTGACGTCCAGTCTGCGACCGACCAAACTCAAAAAATGAAA
AAGAAGATTCTACATTGCGATCAAAACATTCCAGACGCAAAGAGAAAAAA
ACAGACATAAAAAATTCCTGCGTTTTTATCAAATGAAGACTCTCTCCATA
GACCGCCACTTTCAAAACAAAACAAAAACAAACTTTAGAAAAAAATGGCG
ACTTGAAAAAAAATTCTGAAAAAACATGCCGAAGGGAAATGTAAGTAAGC
TATTTTAAAACAAAAGAACGAGTGAAAAGAAATTAAATACGGGAAAGCTT
ATGAGTTTTTTTATCACCCTGATCAATTAATACGACCTTACCTGTAAGTA
GAGCACTGATTTTTTCCTTCTTGCGATCGGTCGCAGACTGGTACGTCGGT
CGGGAAGTGGGCACTAGTACCGCTCGCTTCGAAAGTTTTTTATTCTTAGA
ATCTGATCGCCTCAAATAAAAAATCAAAACAAACACGAAGAGCATGTTAA
AAGTTGTCTAACCGTTGGTTGAAAAAGATTTTCAAAAAAGTAAAAAGTAA
GTGAAAAATTTAAATTAAAAAAAATTTGGTCGCCAACTGGGCAGGGTACT
CTACCCGAGTTTCCACTGGGTTTGTGACTCTAGGGCAGTTTCAGCTGGAC
TCGTGATTCTAGGGTATTTTTAGTTGGATTTGTGATTCTAGGGCAGTTTT
TGCTAGGTTCGTGTTTCTAGGTTCGTGTTTCTAGCAGTTAGTCACACTAG
GAAATCTAGCTTTCAGAAAAAACAACATCAGTCATCTACAGGATGTATTT
GCGAAAAAAAGGATGGGTTATTTTTTCATGAATCCCTTTAGAAATTTTGC
GGCGCATTTTTTTGCTTGAGAATCAGGTAAACGATATAGCCTTTTCGCAC
CATTATTCTTTGATACGCATTTTGGCGGGACGCTAGTGTGACTAACTGTC
TAGGGCAGTTTCAGCTGGATTCCTGTTTCTAGGGCTGTAGTGTAGTATAG
ATATTGGGCCCACCACGTGCGTTTGGTTTGGGAACGCGAAACACGAACGC
GAACTACCCATGTCTAAACTTTTCAATATATCTCCAGAACTAACAGATTT
TTTAAAATTATGTTACTAGGTCCAAGTTCCTGAATAGTTTTACTATGTTA
TGTGAAAAAATCATAACCATCAGTGAAATACTCATTCATCTATTTTTAAA
GATGGAAGACAAAAATTTGCAAAGAAAAATAAACCTTGAGCACAAAAAAT
GCTTTTTTAAACACTTTTTTCCACCGAAAAACAAATAACTTTTATAGACT
TACCTTCCCCAAACATTGGAGAAGCCTCTACTAATTAAAGTAAATGAGAT
AAGAAGATAAGATAAAACCTTATTAAAATCAACCAGAATTTACAACCTTT
TGTCCAAAGCAAAAGATGTGCTTTTCTCGCCGCCTTCTTGTTTTAGAATG
AGAATTCCAGAGAATTCCATTCGGTTCCAGTTCCCACGGTCTTTTTTTCA
TCCAATCAGACCAGACCCCATCAATCGAACTTGTCGAACCAATCGAACAA
TCGAACTCCATCGAACGGTTAAAGTTCGATTAAAAAGATTAAGCGAACCT
AATCGAACAATCACAATTTTTGAAGCAATAGCAGTTCAATTAGTCCGGTC
AGTAAAAAGTAAATGCATAATTTTTAAAATATGCATGATACAGTAATTAT
GCATGGCTGTATCATTGTTTTTATGCTGGAGTACATAATTATTCAACATG
GCTGCCTCTTTAAAAAAAGATCTATTCTGGAATGCGTTGTTACTAAAAGA
GATGACGAGTGGTAACGATGTGGTAACGATGTGGTAACGATGTGGTAACA
AGTGGTAACGAGGTAACGAGTGGTAACCAGTTGAAAACGAGTCGCCCTAA
GTCTTCAAATTTGAATTTCTCAATTCTGGTGTTTTTGCAACAGATGCTGA
TGGCTCTTGAGGTTCTGTAGCAGGACCTGGCAGATCTGGTGAATGTGCAG
TAGGAATTGGAGATTTAGGCGAATGTTATGGTGAAGTTGATAGATCTGGT
GAATGTGATGGTAAAGCTGGTTGTTTGGGTGAATGAAATGGTGGAATTGA
TGGTTCTGGTGAATGTAAATCAAAGATTGATGGTTCTGGAGGTTCTGCAT
CAGGAGTTGGTGATTCTGGTGAATGTTATGGTGGAGTTGATGGATCTGGT
GAATGTGATGGTAAAGCTGGTTGTTTGGGTGAATGAAATGGTGGAATTGA
TGGTTCTGGTGAATGTAAATCAAAGATTGATGGTTCTGGAGGTTCTGCAT
CAGGAGTTGGTGATTCTGGTGAATGTTATGGTGGAGTTGATGGATCTGGT
GAATGTGATGGTAAAGCTGGTTGTTTGGGTGAATGAAATGCTGGTGTTGA
TGGATCTGATGAATCCAATACAATGGTGGAGTTGGTGATTTTGGTGAATG
TGCATCAGGAGTTGATGCTTCTGGTTAATGCACAGCAGGAGTTGGTGGTT
CTGGTGAATGTACATCAGGAGTTAGTGGTTCTGGTGAATATACAGTAGGA
GTTGTTGATTCTGGTGAATGTGCAGCAGGAGTTGGTGGTTCTGGTGAATG
TGCAGCAGGAGTTGGTGGTTCTGGTGAATGTGCAGCAGGAGTTGTTGATT
CTGGTGAATGTGCAGCAGGAGTTGGTGGTTCTGGTGAATGTGCAGCAGGA
GTTGTTGATTCTGGTGAATGTGCAGCAGGAGTTGATGGTTCTGGTGAATA
TGCATTAGGAGTTACTGGTTCCGGTGAATGTGCAGCAGGAGTTGGTGGTT
CTGGTGAATGTGCAGCAAGAGTTGTTGATTCTGGTGAATGTGCAGCAGGA
GTTGTTGATTCTGGCGAATGTGCAGCAGGAGTTGGTAATTCTGGTGAATG
CAATGGTGGAGTTGGTGGTTCTAGTGAATGTACAGCAGGAGTTGGTGATT
CTGGTGAATGTGCAGCTGGAGTTGGTGGTTCTGGTGAACGCAATGGTGGA
GTTGGTGGTTCTAGTGAATGTACAGCAGGAGTTTGTGATTCTGGTGAATG
TACAGCAGGAGTTGGTGATTCTGGTGAATGTGCAGCAGGAGTTGGTGGTT
CTAGTGAATACAATGGTGGAGTTGGATATGATAGTGGAGTTGATGGATCT
GGTGAATGTGATGGTGGCATTCATGGTTCTGGTTAATTTGATGGTGGTAT
TGATGGTTCTGGTTAATGTGCTGCAGGATTTGATGGTTCTGGTGAATGTA
ATGGTTAAGTTGATGGTTCTGGTGAATTTGATTGCGGCATTGATGGTTGT
GGTGAATGTGCTGTAGGAGTTGATAGTTTTGTTGAATTTGCAGCAGGAGT
TAATATACTGATAAATTGTTATTGAGATGTTATTCATGGATGTAACATCA
ACACGTTCATTAACTAGCGAAAAATTTCGGATTCACCATAACTGTATTTT
CATTACNCAACACGTTCATTAACTAGCGAAAAATTTCAGATTCACCATAG
CTGTATTTTCATTACATCCATGAATATCTTGTTAGTTGTTTTGTTTCGAG
AGTTCTTGAAATAGTTTATTGTTCAACTTGGAGAGGGAATGTTTGTAAAC
ATCGAATTATTTTTCATAGCAGTTATTTGGGGGGGGGTCAGATTTAGGCA
GGGCTGTCGGATTTAGGACCACTCACGGTAGAAGATCTTTCAAACTCAGT
ATGTGAATAGAGCAGTAAAAAATACAACTTTTCTATTTTTCCTTTTTTTT
GAAAAAGTTCTAGGAATGAAAATAAAGGGATACAGCAATGATGATAATTG
AATACAATCCATTGATGATCCGTGGCACAATCTTAAAGCTAGAATCGCCT
CGAGTACTTTTCGCTTGAGAAAATGATTAACAGATTGAGGTTTTTCATCA
GTTCAATGTTTATATTGTCAATGATGACAGTGCGGTTATTAATTTTGTTA
GATCTGACAAATTGATGTTTGTAAGTGCACTTTATAGTTTTGATTCAAAT
ACAAACGACATTCCTCAAAATCAGCAAAAACAAATACGTGAAAGAATTCT
TTTTTAAGGGTATCTGTTCTTATACATGAGAGAAAAATTTCAAATGCTGA
TGGCCATAGTTAAGTTGTAAACATGTAGCCTCTGGCAGCTAGTGGAAGTA
CCTCGATTTTAACCAGACGGTGTCAATCGAACATTTTTGAACAAAAATCG
CAATTGAACCAATTGAATGTAATGAAACGCGATCGCATAATTGCAATTCG
GCTGTCAAACGTAATCGAATATTACCCAGGATTTTCGATTGTGTTCAATT
TCGTTCAATTGATTCGATGTTCGATTCATTTGATTGACACCGTCTGGTTT
TAAGCATGTTCAAAGTTCGCAATAACGGCTTTCTTTTTATTAAGGAAACC
AAATGAGTGAGAACAAGTCATAAAACTAAAAGTCAGCGCTCCGTGGTTGT
GATATAGTTTACGAAATTATTAATATATTTAATGACATATATTTTTAACA
ACTTTTTTCTACAGCCTCTTCGTAGGATAATGTGTCTTTCTATAAGCAAT
TCTATAACACTTGGTCGAGACATGGGACTGTTAATATCTGGCCTGTATTT
TCACTTACTGTTAAATCTCTTTTATAACAAATTTGTCTTGATAACTCCAC
CAAGTTTATCAATCATTGATAACTCCACCAAGTTTATCAATCATTGATAA
CTCCAACAAGTTTATCAATCATACTTTCTGTTATAACATGTCACGATAAC
TTTCACTGATAGGGCGCACTTTTTAACTTTTTTGTTTTCATTCAAAATGA
CCGGATGCCGATTGGAGAATTAGAGAACGCCCGCTGCCTATCCACCTATC
GCCCGATGGGATTAACAAAGTTCAGCCAGAAGTAGATTCTACAGCACCTG
ACCCCGAGAATGTAGTAAACCCCGAGAATGTAGGTTTCTCATTTTTTAGC
ATCGTAGCCCTAACGATAGTTCAACTTCATAAAAATTTGTTTCAGAGCAT
ACTGTTACATCTTACTGATTATTTCTGGACAGAAAATTTTAACTTGAATT
AATTTTTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTGGTATTAAGTTATGATGATAGGG
TATTTTCTTAGTCCTAATGAACTAAGGAAATGGGGAAAATAGTCCATTTC
AATATTTATTGTTCTAAGTTAAATATTTTGATGAAAATGTTTGACCTAAC
TTTTGGGGTTAGTTGACCTACAATTTGGGGGCCTTTATAACCCGACATAA
AAAGTCTGTCAAATTATATAAAACTTGTTTGTTGTACTTTTATAACATGA
AAGTACTACCTGAGAGATGATTAATGTTGAATTTTTGAGCTTCTACGACG
TGTCCCAGACCCGTTGGGGCCCCAGCCCAATCAGAAAATTTGCCTAAGTT
TGGAGCAATAGAATTTCTATTCCAATTTGGACTTAAATAGAAATTTTTGG
ACCCGATGTGGGGAAAAGTTCCACCGGGGCTGTGAGGCAGGGGTGTTGTT
ACATTATCCAATTATTTCAACACAAAATTTTCAACCTACAAAATAAAAAC
AACTTTCTTGTCTCTTCTTTTCGTCCTTCCTTTTACTTTTCCTCATTTGT
AGTACGATGAAATTAATATATTTGTAAATTTTTTGTCAGCGTATATTTCT
AAAGTATGAATTTTCACTTAGAGAACAATAATTTTCGATGAATACCGAAA
TTCCATTCCCAACAACCGAATCTTTTCACCTACATTCTGGGGGTTAAAAA
GTGAAAAAATCCAATTTTCAGAATAACAAAATGCTCTTTAGAATATTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TTTCTAAAATTTGCTGTTAGAATTAATCCAATTGAAAAAATATCAACATT
TTACTATTACTAGATTTAAAGCCATAAAACCAAACCTACATTCTGGGGGC
TAAAACGAAAATGGGAGTCAACTTCAAGGACCAAAAATATTGGTCCATCT
CTCAAAAGTAATGAAACTAACCCCTGGGAAAGGATTTCGGGAGTTCAAAA
TTTCGTTGAAAATATTTAATATCTTTTAAAATGCAAATCTACATCTTTCA
GGTCTGATTCAAATTTCACCTACATTTTCGGGGTCAGGTGCTGTAGTCTG
CTTTTTCAAGGGCCAATGACCTTCCGAAAAAATAAAGTAGGAAGGTTAAA
AATTTTCATGAAAAAGGGGTTGGATAGCAAGGAGGGGGGGATCGTTTAAG
AAGTGGGGGTTTACATATATATAATGTATCGTATTTTACTTTTTTGTTCA
CTTATATATAATGTATATAGATTATTTTCAAGCAATGTTATGATTTTGGT
CTGCATGCAAGAAAGTTTTCTGTTTAAGTAGTCTGAGTCAAAAAGGAAAA
AAAAGTTTATTTCTCTTTCTCTCTCTAAAGATATTTCACATACTGCATGT
TTGTTAGCTTAGGAGGATAGTCATTTTGAAGGTTGGGGATGCCAAGAAAG
GGGATCAGACCCCTTTCCGCACTATGTTGTCATGTGATCCTTAAAATCGC
ATTTGCTGTAAAAGTCTGCCATTTGGAAAAAAGTAAACAAATTGCTGTGT
GACTTATTGCAACAATAACACTCTAAATTAACAAAAAAACACTACTACCA
GATGCCAACTGACTCTGAAAAGAGATTACTCTAAGTTGGTCTAATGTTGG
CATCTCTCATCTAACATCGACACCCTTTTTGGACATACCTCCGGGTACCC
CGGTGGAGGTCCTTTAAATTAACCTTCGTTCGTTCGTTCGTTCGTTCGTT
CGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCG
TTCGTTCGTTCATTCGTCTGTTACCAGCTTTTCTCGGGATTGGCCCATTA
CTTTTTTCTGTTTTTTGGCACAATGATGCAAAATGACAATACCTAAAATG
TAACAGAGTGACAGAGCCCGACTTTCGAAAAACATTCTTTTCCGGCCGAA
AATGCTGGTTTTTTGGCATTTTCTCAAGATCTTGTTATTAGTTTTTTCTG
ATTTTTTGCTCAAAGATGTGTATCAACAACGCCCAAAACATGGTCGAGTA
CGATTTTTTAGAAAATTTTTTTCCGGCGGAAAATGCGCCGGAAATCGCCG
TTTTTCTGGATTTTTATTGGACTCGTTCCTTATAATTGGTTGTTTTTTCA
TTCAAAAACATTATTAATAGCAATGCCCACCATCAAGCATGTTTCAATTT
TCAATAAAATTGATTTAAGAAGCCGGAACTATTTAAAAATTGCCGGAACA
ACCTTTTTTCGCCGGAAAGACAGTGTTTCTTGAATTTCTCGAGCTGTGCT
TTATATTTTTTTATGAAATTTTTCTCACTGATGCAAAATGACAATACCTA
AAATGTGACGGAGCGCGATTTTCAAAGAAAAAATTTTTCCGGCTAAATAT
GTCGGAAAAAACGTTTTTTTTTACATTTTCTCGAATTTTTATCCTTAGTT
TTTTCTGATTTTTCACAGAAAGATGCGTATTTGCAATGCTCAAAACATGG
CCGAGTTTGATTTTTGAGAAAAAAAATTTTCCGGTTGAAAATGCCGGAAA
TCACCGTTTTTGCAGATTTTCATTGGATTTTTTCCTTATATCCTATGTTT
TTAACACAAAAACATTATTGATAACAATGCTCACCATCAAGCATAATTCA
ATTGTCAATAAAAATGATTTTTGCGACCAGAACTTTCTATTTATTTTTTC
CCTACAACCCTTCCATGTCCCCCAATCAACAATCAATGATGAGGATTTCA
TTGCGTTATGCATTTTTGCTAAACGCTATATTTTCTGACTATGATTTTTT
TCATTTTTCTCCTCGCATTGCTATCTAACTTTCACAGATTGGAAAATAAG
AATTATACAGGTACGAGCCAGGAAGTATCTTATCCATTTGGTGGACTAAC
TTTATTGGGGTTTTTCTTGTTCCTTATGGTAATAAGAATATTTTAAGCTT
CTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTT
CTTGCAAGCTTGTCTAGACACTAGCACAGATTTGTCGCACAGTCGCTGAA
CGGCCTGTAGAGTTTCTGTCCACCCTACGACCATCACATGGTATTGGTTT
TCCTAGCAAAGTAGCATTTACTTTTCATTAAGTGAAACACAGCACCGAGT
TGGAGTTAGTCCTGATCTCCTAGACGACGGTCAATACTTGGTACACTACT
GCGCCTTCACATGGGATAAATCATAACTGGACGTCTATCTTCCATTGTGT
CTTTGAAGCGAGCTTCGTTGCCGTCTGTATTTTAAAATTGGTATAAAAAT
CCGTTGACATTCCATCACAATGCTATTTCTTTGAAATACTTAGGTAAAAT
GATTGATAGATAGCTTGAAAGTTTGAAAATCTATATATTAATATGCTAAA
ACGTGTGTGTTTACAACGTTTTATAAAAAGTTTTGGAAAATCTAACAAGG
CTCTACAATGCCTCCTCTTCATGGCGTTGAACTTTTTACTCCTTTCTTTT
ATAAAATCAAAATCTTATCATCAATCAGCAGCTATCTTTATTCTTCCGTT
GGTTTTTTTAGATGTATAGTGATTTGCTGGATTTGGGCCGCTGCGCATAC
GGCTAGTTACTCTTAAGTCACAAAATAATTATTTTCAAATTTTTTTATAC
GCTGAAATGGAGAATTTCAACTGCGTGTATACTTTTGANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGAAGTTTTGACGTTGTTAGCAAGGTATT
CCCAAGGTAGATCATCGAAACCTATTGTTTCATTTTATGTTTTAACGAGG
CGGCAACGAAGCTAGCAGTGCTTTCGAAGAAAGAAGGATGTCCAGTCGTT
TGTTCATGTTCTGACAGAGCCACAGAGACCAGATGATTCTAAAAATTTAA
AACCTCACGAGGGGAAAGGAAAATGGGATCACCATCAGCAAGCTATTTCC
GAAACAAATAAGAATTTTAAAATCAAGATTTCTTAATATTATACTTAGAT
TTTTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTAATGTTAAGAT
GCAATGAGAGAATTTTTCATTAATTATTTGGAAATTTCACAGTTTTCGGG
ATCATGTCTTACCGTAAATCATACTTATAAAGTGTTGACCGGACACATTT
AGCCCTTACTTGTTGTTAAGTACCCCTCTGAGTGAGATTACGAAGTAGTG
ATAGGTTTTAAACCCTATTGGGAAACATTTCGCTCATTCATTTCAGACAA
AAAGGCCAATTTGGAGAGAAAAAGATCTTTTTTTCGACTGTAAGGAAATT
GTACTCTGGTCTGTAAAATACACATTTATACTGCAAAATTTTTGAAAATT
TGCACAAACAATTTTTAATGCCTTTTCTAGGAGCACATAAAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNGTGAGAAATCCAGGTGGCCCAGAAGCTTAAAATATTCTT
ATTACCATAAGGAACAAGAAAAACCCCAAGAAAGTTAGTCCACCAAATGG
ATAAGATACTTCCTAGCTCGTACCTGTATAAATGATAATACCTTGCATAA
TTGTTATAGACTCAACCCACTGTAACAACATGGTTTTTTACTTGTTGGTT
TTGCACCTCAGTTAGTAAAGAAAAGTCACATTTTGAACCCTCAACTAGTG
GCTCTTTAACATTTTTTTTGTGGATTGAAAAACTTTCCAACTTATTTTTG
TATGTTTTAAATCTTGGTAAATCATCTGTTACAAATGCGGACTAACTGAA
ATTTTAGTTGAGCTTGACATTCCCAATTCTCCTTTTACGAAAAGCAAGCT
TGTAACATTGTATCAAACTTTTTCCAACAACAAATCTTCTGGTCTTATCT
GACAATAATAATATCCCGACAGTCTTATGGAACCAACCATACCCAACCTT
CCATGATCTTCTTTTAAAGTTTTGCAACCAAAGTTTTGACAATTGCAAAC
CTCACAGGTGGCGTTTTCCCTGTTCCAAGAAAGGACCTGAACGTAGCATC
TAATTACAGGGGTATCACGTTCATGCAGATAGCCACCAAGATGTACAACA
AATCGATTTTAAACCGTCTTGTTCCTGTTTTTGATCCATGACTACCGGGC
TCTCTAATTCATTCCAAATTCTTTTTAGAGGCATGACAGACGAGGAGGAG
CCAAAACCTTTAATCAAAGCAAAAGATCATAAATATCCTGGATATGAACA
AGAAAGCAACAAGGAATGGAAAGAGAATTTCTATTTCATACAAGCAGCTG
ACACTCAATTTGGTTTGATCGACGATTGGGCGAATGTACCTGTTGAAAAA
CAAACTTGGGATGAAGACATTAGACTTACCGAGTTGGCAATTAAACATGC
AAACACATTAAATCCAAAACCAAAATTTTTCATTGTATGTGGAGATATGA
TTAATGCAGGGCCTGGTCAGATATACCGTGGTGAACAAGAAAATGATTTT
AAAAGGATTTTCGAGCAGCTTGATTCAGACATCCCACTTGTTTGTGTTTG
CGGGAACCATGATATTGGGAATAGCCCGACAGTTGAAACGGTGGCAACTT
ATCGAAATATGTTTGGGGATGATTATTTCTCCTTTTGGATTGATGGTAAG
AATATAATTAATTCAACATGAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
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GATAATGTTACAAAGACTCTAGGCGTGCCTAATACAATGAAATTTTTATC
TAGTCTAGTTTATCAACTTGTTTTATGAATTTTATACATTTTGCCAATTT
AGTTCAAAAAACTTAATTTACGTTGTGTTAGAATGAGAAAAACTTGTTTT
CATTTTCAGGTGTCTAAAGTGTGGAAGTGATTCATAAGAGGAATGTTCTT
TGAATAAAAACATCCACAGATTCTGTTTAGCATCCCTTGTATGCAGTATC
TTATGCATATAACTTTTTGCATTTTTACTGATTGCCAATTTAAGGGGGGG
GGGTGGTTCCCCCTTTTTCAGAAAAATAGGGATTTTTAAGTTCGCATCGA
TACCAATTTAGGGGGGTGGGTCCCCCCATTTTTAGAAAATTGGGATTTTC
AAGTTGGTATTGATACCAATTTAGGGGGTGGTGGTGTCTACTACTTTCAA
ATCTCGAAAAGTCAGGTTTTTGGGCCCTGGGTTGGTATCCTGAACCCTGA
CCCCCCTGCATGAAATAAAATTTTCTTTATACTGTACCAGGGTGCATTGC
ATCTTTATCGGAAGTGTAGTGATAGGACAGTTAATTTTTGAAATTTCAAT
AGATGTTGAGTCTGTTCTCCGGCAAACTTTTCTGCTCTGGATTTCTCTCT
CTCATTAATTAATTATTTTTAATTTACGTAATCGATTGTAAAATTATTTA
TGTACACCTAGGAAAAAGACTTAGTGTTGTGGTATCTGGACAGCGTTATG
CATTCCTGCTTTAAAAAAAGGAGGAATTCTCTGATAGGGAAGGCTCATAT
CATTACCACGAAGAAGTCAAGAATTAGCCAACCCGAATTTCAGGGTAATT
TGGGTCCATTAGTCTGTCAACCTGAGTGGTTGGGACCCTCTCTTTATTGA
CCAGGGCGGATAATGTGAGTTGAATGTAACATCTTTTTAGAACTAACAGA
TATAGAAAATTGAAATTTAGCTTCCAAAGTATTTCTCAGATAAAGTGTAG
CCATGGCAACAGAGCTTTATTTATTTCCCTGTAGGTGTTTTATTTCTGGC
ATTAAATTCACAATACTATGAAGACCACTCTCAAGTGGAAGATGAATATA
CACAACAAGAATTATGGCTTGATCAACAACTTGAAGTGGTCAAACTAAAA
CAATGTCAACATTGTGTTGTGTTTCAACACATCCCATGGTTTCTTAAGGA
CGCTAATGAGGAAAAAGACTATTTTAACATTGAAATTAATACTCGTTTGC
GAATGTTGAATAAATTACGCGATGCTGGTGTGCGCCATATTTTTTGTGGT
CATTACCATCGCAACGCTGGTGGTTTCTATGGTGATTTAGAATTAGTTGT
GACGTCAGCTGTTGGCTGTCAGATAGGGAAGGATGTGTCTGGTATGAGAC
TTGTAAAAATTACCAAGGACAAAATTGAACATAAATATTATGGAGTTGAA
GACGAAAACTTTCCCAAGACAATTGAACTGGATGGAGATTGTAAGTTGCC
GTAAAATGTTTTGTGTTGTGGGAATACTTTGTGGGCAGAAAGTTATGAAT
TCACTATGTTCTTGTTTAATTTTTGGCGTGATGCTTATTACATTAGCTAG
TAGAGCTTTTCAGGCAGGTCCATTCAGCATCTAGCTTGTTCTCGATGTCC
CCACATAAGAAACGGCTCAGGTATGCATCGTTAAGGTTTCATACTTTATT
TTCTTGTTGACTAAATCAAGACCAAATTTTACGCATTTTATAGGCTTTTC
TAACCTTAACCTATACGGCTTTTGCTTGAGGTTTTTTTCTAACAGCGTAT
TTTCAACTAAGCACGAAATTTTAAATAGAGGTTTATATATTGATTAATTT
CTATTCTAATTGAGCGTGTAAAGTTTTTATTAGTAAGTAATATTTACAAA
GTATACTTTATTCAGATATTTATCGTAAAAGTATGATATATTATTATAAT
ATATTTTATTTTTCTGTTTTTTTACTATGATCTACAAATTGTTCAACACT
CGTTTTAATGTTACAGCTCCTAAAGTAAGTTATTTCATTGATATGATATT
AAAATGGAAAAACTCTACGTGACTAATGATTTGTAAGTCAGTTCAAAGCA
AATTAAGAAAAGTCTGCCACATGGTCATGGTTTAGTAGAGAAAACAAACT
ATTTATTCTTCTAAGTATCTGGCCGAGCCCTCGACCTTAAAAACTTTTAA
AAACTTAATTTTTATTTTACCGACAGTCTTAGTATAAAAANCCTCGACAT
TAAAAACTTTTAAAAACTTAATTTTTATTTTACCGACAATCTTAGTATAA
AATGTCTTTGGTAAAATAAGATGTTTCTTGCATTTATATTTGGTTCGGTA
ATGATTTTGTATATTGGAGAATTTTATGATATTATGTACAAATTATTGAC
TGAATAAGCAGCCATTTTTATTATTCTAGGCTAGGTAGGGTGTAGGAAAG
TTTTTATATTCTTTTTACACGTATTTAATCACCTATGAAAGACATGTTTC
ATATTTAGTCTAGCAATCGAAGGACTTTCTTCTTAAATTTTAGTCTTTCA
AAGTAATTTTCTAATCGTTTCCTGATGGTGACAAATTCAAGGCTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00011046-exon-sc0000119-1575043694:413541..413753 | TCONS_00011046-exon-sc0000119-1575043694:413541..413753 | Clytia hemisphaerica | exon |
| TCONS_00011046-exon-sc0000119-1575043694:398909..399375 | TCONS_00011046-exon-sc0000119-1575043694:398909..399375 | Clytia hemisphaerica | exon |
| TCONS_00011046-exon-sc0000119-1575043694:393308..394869 | TCONS_00011046-exon-sc0000119-1575043694:393308..394869 | Clytia hemisphaerica | exon |
| TCONS_00011046-exon-sc0000119-1510915933:413541..413753 | TCONS_00011046-exon-sc0000119-1510915933:413541..413753 | Clytia hemisphaerica | exon |
| TCONS_00011046-exon-sc0000119-1510915933:398909..399375 | TCONS_00011046-exon-sc0000119-1510915933:398909..399375 | Clytia hemisphaerica | exon |
| TCONS_00011046-exon-sc0000119-1510915933:393308..394869 | TCONS_00011046-exon-sc0000119-1510915933:393308..394869 | Clytia hemisphaerica | exon |
| TCONS_00011046-exon-sc0000119-1491911889:413541..413753 | TCONS_00011046-exon-sc0000119-1491911889:413541..413753 | Clytia hemisphaerica | exon |
| TCONS_00011046-exon-sc0000119-1491911889:398909..399375 | TCONS_00011046-exon-sc0000119-1491911889:398909..399375 | Clytia hemisphaerica | exon |
| TCONS_00011046-exon-sc0000119-1491911889:393308..394869 | TCONS_00011046-exon-sc0000119-1491911889:393308..394869 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000119 | supercontig | sc0000119:393308..413753 - |
Blast
BLAST of TCONS_00011046 vs. Swiss-Prot (Human)
Match: CPPED (Serine/threonine-protein phosphatase CPPED1 OS=Homo sapiens GN=CPPED1 PE=1 SV=3) HSP 1 Score: 312.383 bits (799), Expect = 3.347e-99 Identity = 150/307 (48.86%), Postives = 205/307 (66.78%), Query Frame = 2
Query: 218 MTDEEEPKPLIKAKDHKYPGYEQESNKEWKENFYFIQAADTQFGLIDDWANVPVEK--QTWDEDIRLTELAIKHANTLNPKPKFFIVCGDMINAGPGQIYRGEQENDFKRIFEQLDSDIPLVCVCGNHDIGNSPTVETVATYRNMFGDDYFSFWIDGVLFLALNSQYYEDHSQVEDEYTQQELWLDQQLEVVKLKQCQHCVVFQHIPWFLKDANEEKD-YFNIEINTRLRMLNKLRDAGVRHIFCGHYHRNAGGFYGDLELVVTSAVGCQIGKDVSGMRLVKITKDKIEHKYYGVEDENFPKTIELD 1129
M+ E +A+ + E EWK FYFI AD QFGLI W+ + W+++IRLTE A++ N LNPKPKFF++CGD+I+A PG+ +R EQ D KR+ +D IPLV V GNHDIGN+PT ETV + +GDDYFSFW+ GVLFL LNSQ+YE+ S+ Q+ WLD+QL + + + CQH +VFQHIP FL+ +E+ D YFN+ +TR ++ +K AGV+ +F GHYHRNAGG Y +L++VV+SA+GCQ+G+D G+R+V +T +KI H+YY + DE K IE D
Sbjct: 1 MSAAEAGGVFHRARGRTLAAFPAEKESEWKGPFYFILGADPQFGLIKAWSTGDCDNGGDEWEQEIRLTEQAVQAINKLNPKPKFFVLCGDLIHAMPGKPWRTEQTEDLKRVLRAVDRAIPLVLVSGNHDIGNTPTAETVEEFCRTWGDDYFSFWVGGVLFLVLNSQFYENPSKCPSLKQAQDQWLDEQLSIARQRHCQHAIVFQHIPLFLESIDEDDDYYFNLSKSTRKKLADKFIHAGVKVVFSGHYHRNAGGTYQNLDMVVSSAIGCQLGRDPHGLRVVVVTAEKIVHRYYSL-DELSEKGIEDD 306
The following BLAST results are available for this feature:
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