TCONS_00011024 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011024
Unique NameTCONS_00011024
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1804

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011024 ID=TCONS_00011024|Name=TCONS_00011024|organism=Clytia hemisphaerica|type=transcript|length=1804bp
CAAGGCTTTTATTTGAATCCGTTTTCCTCGGAAACAACGAAAACAAATTT
AAACAGTTGGgcacattaaaaaaaaattatatttcataaAACGTCTTTCG
ATCGAGAGACGATGGGCAGACTTCCGAACGATAATTATTGACAACACAAA
AGACGACTCACGATTAAAAGCGTACTCCGATCAAATGGTATTGCTGAACT
GACTAGGAAGTAGGAAGAAATTCTTTCtcagtttcttttttgaaaacttt
ttatttgcTCAGTGAAACAAGACAATCAAGATTCTCAAGGATTGCATTAT
TCACAAAGGAAGACTATAAGGGCTGTCTTTAGAAAATAATGAACATAGAT
TTCGACTTCAACCATGGCATATCACTTTGTTAAATCCAATCGAATCGAGA
ACAAGGGGCCCGGTCTGATTAATTAAGATTGTCCAACGTCCAATCATCGT
CCAAGTAACATCCACGCACGCAGAAGACAAggattttaagaatatttctg
TTGAGAATTGGCGAACATAAAATGACGACTAAACAAGTGAAGATTAAGAA
TAGGAACGTACCACGAACCTATGATAAAGATGGTTTCAAATTGAGAGCAG
GTTGTCTTTGCTTCAAAGATGAAACACAAAGAGAGGTATTGCTAGTGACT
AGTTCAAAAGATACGGATTTGTGGGTTGTACCTGCCGGAGGAATCGATCC
GGGTGAATCACCTGAACAAGCCGCTGTCCGAGAGGTCGTGGAAGAGGCAG
GGGCGATAGGAAAGATTGGGACATGTCTTGGTGTCTTCCAGAATGACAAA
TCAAAGTCACAAACGTATATGTACACAATGATCGTTAAAAACCTCGTCGA
ACCAAAAGAAAACAAAGACCGTAAATGGTTCATGCTGAAGGACGCAGTGA
CGAAACTCAATCACCGTCCAATCCAACAGTCGTATTTGACCAGTGTCATC
TCtaccaatcaaaacaaagatcctAAAGTTAACGTTTACTCGATCGGTAA
CCTTCTACCCAAGCGATGATGGTGTTGGAATCAGACTTGAGAAATTTACC
CCTTGTACATATggagaatgtttttttatatgcaatttttcttGATGGAT
GGGCCATGATAGTGTAGATTGTAATATTTCTAGGATGCTTATAATGTCAC
TTCTAAATGTGATTCTTTCTGAGGATGGTTTTTGCTTGATCTATTACTTT
ATCCTGTCAAATCATgacgcaatttttttttaagtcgGTATTTCAACAGC
TACTCCGCCCTTGCTATTCCAGCCTTGCTATTAAGCTAAAGTCAGCCAAT
TATATCTGTTATGTGTCACCTTTTCGAGTTGCACAGTTTGAGAGATTGAG
GCTTGCTTCTTGTGGTGTTTCCTTGTGGTGTTTCCTTGAAACTTTATCGT
TCGCAGTGTGGAGATGTAAAGCTTTTCTTATAGGGACTCAATGTTTGTAT
ATGGGATAAATTTTTATTCGCTGAACTGGAAATTGGTTCAAAGCTAATAG
TTATTTTTTTCGCTGGATAAAGTTGAggaaatactttttgaaatacAACT
TGTGAAAATTGGTTTTGATAGAAAAATCATAACAGTTTTTCTCGCTTtta
ataaatgaaattttctcaTCATTCGAAGAAATACGaaagaattttgatga
aaagaaagatatctgaaaaaagaaatatggtataattttatttttattat
ttttgttttatatagGTATAAGTATATCAATAATATTTTATAGTATTTGT
GGTCAGGAAAATATGTCTTGAGAAGATATATCGAACAAATTGGTTGTATT
ACGA
Run BLAST on NCBI

protein sequence of TCONS_00011024-protein

>TCONS_00011024-protein ID=TCONS_00011024-protein|Name=TCONS_00011024-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MTTKQVKIKNRNVPRTYDKDGFKLRAGCLCFKDETQREVLLVTSSKDTDL
WVVPAGGIDPGESPEQAAVREVVEEAGAIGKIGTCLGVFQNDKSKSQTYM
YTMIVKNLVEPKENKDRKWFMLKDAVTKLNHRPIQQSYLTSVISTNQNKD
PKVNVYSIGNLLPKR
Run BLAST on NCBI

transcript from alignment at sc0000119:124445..142011-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011024 ID=TCONS_00011024|Name=TCONS_00011024|organism=Clytia hemisphaerica|type=transcript|length=17567bp|location=Sequence derived from alignment at sc0000119:124445..142011- (Clytia hemisphaerica)
CAAGGCTTTTATTTGAATCCGTTTTCCTCGGAAACAACGAAAACAAATTT
AAACAGTTGGGCACATTAAAAAAAAATTATATTTCATAAAACGTCTTTCG
ATCGAGAGACGATGGGCAGACTTCCGAACGATAATTATTGACAACACAAA
AGACGACTCACGATTAAAAGCGTACTCCGATCAAATGGTATTGCTGAACT
GACTAGGAAGTAGGAAGAAATTCTTTCTCAGTTTCTTTTTTGAAAACTTT
TTATTTGCTCAGTGAAACAAGACAATCAAGATTCTCAAGGATTGCATTAT
TCACAAAGGAAGACTATAAGGTATTTTATTATTCCTTTTTTCTATTTTCT
AGACATCTTCCAGTTTAAAGTCAGTTTATGTTATCAAAAGTAATCAATAA
CAATCAAAGTACTAGAGCGACTAGACTAGAGCGGTCATCAAGTCTTCGAA
GGGTTGTTAAGAAAGTGATTGAATACTCACAATTTTTTTGAAATTTTGGT
ATTCGACTTTCGCTTGTTAATCAATAAGTAGTTGTTTGATTACTCCGAGC
ATTATCGATTACTTCGAAAATCGAATTTACAGCCCTGTGAATTCAGAAGA
AATCATATCACGTAAGTGCCGTAAGTGCCGACCAAAACCGGCCGTAGGGC
AGCAAAATTTTGCCGACCTAGAGGTCATTTCAGGTCGGTAAAGCCGTCCT
AAGTAGCTTGTTTAGGTCGGCAAAGACAATAAATTTCCTACAGTTAGTTT
AACTATCCTTAATAATTGTATTAATAAGTTTTATGTTTTATACCTAGGAC
AGACCTAGACCAAGTTTGCTATTCTTCGTGTAGTCTTGAATCATGCTTTG
CTGAAATTATCCTACCAAACAGTACCAATATCATTGTTGGTACTATATAT
CGCCATCCAAAAATGGTTGGCTTCAATCAAGATTTNNNNNNNNNNNNNNN
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NNNNNGGGGTTATCCTGCTGTGTTGCAGCGAAAATATATTCAATTCAATT
CAATTCAATTCAATTCAATTCAATTCAATTCAATTCAATTCAAATTCAAT
TCAATTCAATAAAGAGAATGGAATGAGGCTCGATTATCCTGTGTTATCAA
ATGATGGCACAATAACAAATAATATTTTTCCTCTTTAGGACATTTCTTTT
GTCGGCACGCCGACCTAGAGTGTAAATTACGTCGCCAATAAAAGCTGACT
TCAGCTCAGGTTACGTCGGCTTTCATGTCGGCATTGCCGAATGCCGACCT
GGATTCACAGGGCTGAATTTATTTATTAGTACCGTCTGGTTATTTCCAAG
CATTAAAAAAATAAAAAATTGAGCGGAATTTCCAAAGCACTTTGAAAAAT
TGACTGGATTTCTGAGTACTTAATTATTAATCTGAAAATTCCTGTCGTCC
ATCCCCTATCAGTTACATCAATATGCCTTCTTACCTGCCTTTAAAAATAT
AAATAAAAGTAATCACAGAAAAGGAAGCGAAAAAAAAAGACATAAATAAG
TGTGAGAACAGAGTAATCAAACTCGTTAGAAAAAGTACCATTAGAAGTCA
TAAAAAATCAACCTGAATAAATGCGATCGAAATTCCAGAGAACTTCATAA
TTCCCCAAACAACATTACATACTATGTCAAACTCCCATCACATAAATTTT
ACAATTACGTCAGAGTAGACTACGCTCGCCACCGAAGAGGTTTATTTGGA
AAGGGTAATTATATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNATTATTGAAAGTTTGTCTCGGCCTT
TTTATAATGAGCGAGACATAAGTTCTCTGATTACGCAATTTTCATATTGA
CATTTTCGAGGCATTTTGATGTAACTGCAATTAACTGTAATTTTTTTCTG
AAAGAGCCCATCTTCTTTCTTTAGTACTGTCAACTGCTCTAACTTGGGAC
TATCCTGACAAAACTTGGGACGGCATTTCGGCCACCATTTCACCGAACCT
CCAAACTCATTTGATTTGAGTTAATGAACAGCGTATTAAAAAATACACAA
TTTTTCTTTTGCACCGAGTAGGCTTTTAAATCGAAATATGAAACAAATCT
GACCAAAAGAAGACCAAATTAGTGGCAAAATGATGGAGCCTTTGATGTCA
CTCGCGCGGCAAGTTACTTGTTATTTGTTAATCCCATCGGGCGATAGGCG
GCAGGCGTTTTCTGATTCTCCAACCGGCGCCCGGTCATTTTGAATGAAAA
CGAAAAAGTGAAAAAGGGTGCGCTATCAGTGAAAGTTATCGTGACATGTT
ATGACAGAAAGTATGATTGATAAACTTGGTCAGTACAGACCAAAACTTCT
ATATCAAGATAACGGGATTTGGAGTGCGGGTCTATTTTAATTTCGTTTTC
AGTGGTTTCACTTTTGATTTCAAGCCAACATCTTAGCAACGAGGTAAAAA
ACAAACATAGAAAGTTTTCCAAATCCCCTATTTCAATTGAACCAATAGAA
AATAAAACTTTTCCATGTTCACTTTTTTGCACCAATTCTTTAAAATGAAA
ATATTTAAGATTTAAGGTTCTTCTTTTATTCAATGATTTTTAATGGCACT
TTGTTGACAATCTAACTCTCGCATCAAATTCCCGCTTTCTTCAGAAAATT
GAAGATGAGAAAAAACCTAAGCCTTAGGATCACAGACTAAAACAAATATA
TAAAAGGTGAGATTTTACAGCCACCCGTTGTCCAAGGCACTGCGAGGCCA
TGGGTGCAAGAAATACTGAAAAATAAGGGCAGTGTGAAATACGGCAATTT
CATTGGTGGAAATTCAATATAAACATCTGCAAAGGAGTGCCGGTAAGCAA
TCAGTAGAAGAGACCACTTTCGTTTTTGTTGCAGATTTCAATATAAACTT
CTCTCGCAGTTGTGCTAACTTGTCAGCATTGTATTGTTGTTAAGCGAGAG
ATAAAAGAGATAAGACTAGCCTAGTTTCTAATCCTGATATAGGAGTTTAA
GCTTAGACTGTTGGTGGAGTTATCAAAACAAATTGTTGTCAAAGAGATTT
AACAGTAAGTGAAAATACAGGCCAGATATTTCTATTTGGTTGAGTTGCAG
GAGGCTTTAGAGGCCTATTCTCGCAACATAGACGCTAACTAATGAGCGTC
CCGTCAGCACCTTGAACTGACTACCCAATTCCCCTCACATGGCATGGGTT
GACCCGGGCGAAGGAACATTCACTTGCCAAGTGAACTGCCGTGAGTGGGA
ATCGAACCCTGGCCTCCTGCACAGAAGCCAAGGTTGACTACCACTATACC
ACGGCACCTATATATATCAACAGCCCCATGTTGACCAATCGTCCGGTTAA
AATAGACTTATGTGTGCCATCATATGATAATATGACATGATCATGATTCG
CAACAACCCTGTCGACACACAAGGCAGTCCGTTGTCTGTCCAGTGCCAAA
AGTATCCCTCAGCCACACCGGAAACCTTTCGTGCAAAGGAAGGAGCGAAA
AGAGATCAAGAGAGCAAAAAAGGTATCAGGGAACATAAAAGCAAATTTAG
AAGGAAAAATAAATCAAGAGAGTGAAAAGGGATCAGGGAGCATAAGCAAA
AAGATATCAGGGAGTGAAAAGAGATCAACAGAGTGGTAAGGGATCAGGGA
GCAAAAATATATTTAGGAGGAAAAAGAAATGAAGAGAGTGAAAAGGGATC
AGGGAGCAAAAAGATATTTAGAAGGAAAAAGAAATCAAGAGAGTGAACAG
GGAGCAGGGAGCATAAGCAAAAAGATATCAGGGAGTGAAAAGAGATCAAC
AGAGTTTCAAAGAGAAAAAGGAGATTGAAAGAGTGAAAAAGGATCAGGGA
GCAAAACTGATGAGAAGAGAGTGGAAAGGCAAAAGCAAAAAGCGGGAAGG
AGTAAGCTCTCGATAATAAATAAACCGGTGTTGAGGTCGTCCGGTGTTAA
AAAGTGTCAGTTAAACATAAGTGAAAAAAATGGATTAAAAAATTTTGGTT
GCCAACTGGTCATGGGACTCTAGATAGTCAAGCAGTTGAGGTCACAAAAA
AAAATGGGTGGGGTGTAAACAATCATAAAGCAATTTTAATTGCAAATTTT
TAGCCCAAATATCTAGAAATCATCAACCAACTGACTTCCCCTGCAACAAC
TTTTAGGTCCCAGAAGATGACATCATATAGGCCCAAGCTAACTAAAAAGT
TTTTGTGAGCAAACATGATCATATTATAGATACCGTCTTCAAACGTTTAT
TAAGAAAAAGGTCAGTGACCATAGCTGAAAGTTTCTTTATAAAAAGTTAC
GAAGGTTTCTTTAATGCTCACAACGTCATATTCTTACCTGGTATGAGGGA
AAAAAATCTTAAAATTCAAACTCTGGAAATCCAATATTCTAAAGCCCTCA
AAAATTGATATATTGAAGACTTTTAAGTGGATATATACGATTTCTCAACC
TAACTCTCGGAAGAAAGATCTAGAGGGGAGAAGACACCCACCTAGATCCG
TACACTGACGGATATCTATGACACATTTACATGTGCAGGATTATTTTTAC
TTTAGCATAATGAAGGCTTAACGAATCAAAGTGCTATTTTGTTTGGTTGA
TTAGCTGGCTTCTGCATGTTTTATTTTGATTCAGGTTTTCTATTAACCTA
AATTGAAGACAAAATCACAAATATATTTTTGGGATTGGGCAAGCAGGAAT
AGTTTCTTGGGAGAATGGGGCGACCTATTGACTCTCTGATCTGCATTTCG
GAATGCATGATTCTTACTAAAAGCTACTTTTGTAGAGATATTCAATCCCA
GGAATTTCTAGTGAGTAGATTATTAGATGGAGTGCTACAATCTACTTCAC
CGTTTTGGCTAGAAGTTGGAATAAGTTAAAGGTGGTTAGGACAGACTGAG
AAAAATTTGGAAATCAGACACTAGATTGGCTAAATAAGGGCATAAAAACT
TATTTCCCGAAATGATTGTGGTTTTTACAATCACGCTGCTGAATTGTAAA
ATTTACCCCTATCATGCCTTAAAAATCTTGATTTCACAATCATGGCTGGT
AGTTAATTTTCACGTCATTCGCCACAACAAACCCTCGATCAGGCCATCAC
GCCGACCCTGTTTTTAATTATTCAACATGGTATTCTGTCTTGCAAAATAT
CTATTTGGCTATTATCAATTAGGATCAAGGATTGAGCTCCAAACAAGCTC
ACTTGTGTGATTTTCTCTTAATATGGGCTGGTCTGTAGTTTGTACAATAT
AAATAGTGAGAAACCCTGGCTCAACTGTAATTTTCTTGTTCTTTCCACTT
GATTTGCCTCCAGTATTTTTTAAAGGCTCTCTTTATCGTACTTTTAAAAG
TTGCGAGGTTGTTCATAGAGGCAAAATAAAGTCGCTTTATGGAAGAAAGA
ATAAGGAAATTAATTTAAAAAGATGTTTAACACCAAGTTTAGATTACCTT
TATTATTTGCTTTATTTACACTGTTTATTCTTGCTTTTTCACCGGTAGAA
TCATGGTAGGATTTTGAAAACTTGAGGGGGTAGCATCAGATTTTAAAATG
AGAAAGAACCTAGGCTAGAGGAGGGGTAGTGTCCCCCTTCCAAACTATGG
TTCAGAATATGATTTGCTTATCTACACTGTTTATTCTTTATTGACCTTGT
AAATGAAGTGATGTCAGAGGCGCTCATAAAAAAACAGCATGGAAAAGATT
TTCTGTTAAAAAAATAACAAGAGAATTGAATATAATATCTAGTAGGATCT
TGCATTGATGTGGAAACATAGCCTAAAGGAATTACATAATGACTAGGTTT
TTTCGTGTCACGTTCGACCTGGCGATCAAAATCAGTCAGGTCGAAGAGAT
CATATCAGTCAGGAAGTTGTTCAGCAATTCTCTTAACCCTCTAAATCTCC
ACTGTCAGACTCAGACTCCTATTCAGTCTAGGAAATGCACACACAATTAC
AACATAAGGCAGCAATCACAAGAATGATCTTTATTTTGCGTCCATATATA
ATTTGCTTGGTTGTTCAATAAATATTTTACTGGACAGTTTAATATTTCAC
TGTAGCACAGACCTAATTAATTGAACTGATTGAGCTGATCTAACTTCATC
AAGCCATGGAAATACAATTACGAACCTATATTGTGTTTGTCTCGTTCTAT
CTTTAAGCCTAAGAATTGCAAATTCCCTTCCATCTCTTCTCAAAAGAAAA
TTCTGACCGTCCTCCAAAATCATGTGACAGGCATACGACATTTTTTAAGT
ACTAGTCTGAATTAATTCTGTTTGTTTTTTCAACATTGATCAGAATACAT
CATTCTAGATGTCTGACTAAGAATGTTTGTTTTTTGACAATCTTTGGAGT
TAATTACTTATCAACTTTGGGTCATACATAAAATGGTTTCTTATTTAAAC
AAATGATTATTGTATCATTAGGAAATGTAGTTATCAACAGAGGTAGATTC
AACTGGTCATCAGTCTAATAATTATGTTTTACTTTTCTTTTAATGTCTGT
TAATAAAAGAGATAAGAAGAGTGTTATTTTTTTAAATATCGAATTACTTT
TTCTATCACTTTTTTTGATAGATTTCAACAAATTATTTTGTTCACATAAT
AAAGCTTTTTTATGAGAAGTTGTTAGAAAATGCGTTTTTTACAGTTAAAC
TTTTTTCTATTTTTTAGCTGTTATGTGTGACTACTTTTCTCAACTATGCA
ATCAGCTCTGATGATAATAAGTTGTAAAAGGCTAGTTATCTTTGACACGT
AAATCATTTTAAAAATTTATTAATAAATATAGCTGTGTGGACCTATACTG
TTCAGAATGCTGTTGAATAATGTATTACATTATTCTGATAAAACCAGCTG
GAATAACTGTTCATTTTGAAGGCTTGATAAATCAAAATTTTGATGTGTAT
AGAATTCACTATTGACTGAATGTTCACAGGAANTGAAGGCTTGATAAATC
AAGATTTTGATGTGTATAGAATTCACTATTGACTGAATGTTCACAGGAAA
TTTGTGTTTTTCTGATGTGGGAATTATTGCTAGGGTGATTTTTATATGGA
TAAATCTCAGCTCTTTGACCTCTCCTTTCGTTTTATTGTTTTGACAATAT
TTTCAGGTGGCCATGTTTGCTTTTTTGACTTACTTTGGAGGGTGATGTCC
TAGCTCTTGCGTTTTATATTTGTAATTTGTTATATTTGTTACATTATTTT
AGTATTGGTAATTTTCTGTTCTTATAACCTTTGTTAGACCTGCCAGTGGT
CGAATGATTGAACAACTCTCCAGGATGCATCTTCAAAATAGATATATTTG
AAGAATTGTGAAGAAGATTCAAACAAAGCTAAAATGAATAACCCACGAGC
TCGTTTCTTTTGCAATTACAGTACCGTACTAAGTAAAATGTCAACTATTG
TTATACAATACATTTTATTTTTGCACTGTAACAATTTGCCCTCTTCTTTT
CTACGTTGCTTCTCTGCTAATTGAGGAAGTAACAATTATCCGAATTTAAT
TGCTTTTTTAATTGTAATTTGATGTCAAATCCTAATTCCTGCTTACGTTT
CTATAATATCATATCTGAGGAGAGCATTCATAAAATGTATAACTAGAATA
CAAGCGTAGGTTTCGATCAGGACCAGGAAGTTATTGAGAAACAGTACTTC
TTATTTTTTGTCATTTTTTGCTTAACAATAGTTCCATTTATACTGAGGCG
GAAAAATCGTCTGAGACGAGTAGTTTGTAAAATGTGATCTGTGGAGGAGA
TCATATTTATTGAAACATGAATGGAAAGTAGACTCCTCCAAATTAATCGT
TTCAGTATAAATAGAACTATTCTCTCATATTCTGTATGACTTGAGCCATC
TCAAGGTTGAGGTTTTGCATGTTGAGTTTGTTGAATCTAGTGGTGTTGCT
TTCTGATATATAACTTCCTTTTCATTTTTTTATAACTTTTTTTGAATAGC
TAGAATTTCATGCAACGAACAGCGTGGGTTTGTCCTGAAAGAAAAGCTGT
AATTCAATCACTTGTGAACCTTTCAAAGTATGATGTCTTGAACTATCTCA
CGTTGATGAAAGCATGATATGATTGACAATCTTTGTCTTTAAATAACCTT
ATATAAATCTTACCACATTAAAGAGAAAGCTATAAAGTTAAGTTGATAAG
TGCCTCTACTAAAGTTGGTTTGTTTTGATTTATCAAGTTGTCGAAGATTA
ACATTCTACTAGCTTTGATCTTTTTAAGTTTTCTTCCAATCGAGCTTTTA
GAAGTTTAGAAATGACATGCTGAAACGACTAGTCAATTGTGTAAACAAAA
GGACAGCTGAAATAATTCTTAAGGGGATTTCTCAGTTGTCGTATTATCAG
CATTATATTTTATGTTTGTGTGTGTCCTAGTTTCGGACACTTCCATTACG
TCTTTTCTTATCGTCTTTGATCATCGAAGTTTCTGTGTTAAATCTTGTTT
TATAGCTATAATAACTCTATTCAAAAAAAGTATGCAGACATTCAATAACA
TGTATTTTAGATTAACGTATTTTGAGTTATTTCTAGTGTTCATTAGGGAA
CTTCTCATTTAACTTTAGCGAATAAAAAGACGGAATTTTCAATGTTTTAT
GTATTGGAATATTCTAGAATACGTCATCTGAAACATAACCTTTTCTCAAA
GAAAGAAATCTCTGAAGGGGCACATTGGAGTGAAAATGGGGTTAAATTAG
TCTGGAAATTCTATCACTTAGACTCTTGTTTGTAACATAATCTTGATTAT
TTATTTATGTCAAGAAATTTGTTTTTGTTAAGTTGTTGTCAAGATTTGGT
TTGATGACGAAATGTTTCATAAGGCCAATATAAACTTTGGACAGATTTAT
TTCAAAAGCAAACGCTAAAACGTTTTATCGTTAATTTTTCACATCATCAT
ATCATTTACAGGGCTGTCTTTAGAAAATAATGAACATAGATTTCGACTTC
AACCATGGCATATCACTTTGTTAAATCCAATCGAATCGAGAACAAGGGGC
CCGGTCTGATTAATTAAGATTGTCCAACGTCCAATCATCGTCCAAGTAAC
ATCCACGCACGCAGAAGACAAGGATTTTAAGAATATTTCTGTTGAGAATT
GGCGAACATAAAATGACGACTAAACAAGTGAAGATTAAGAATAGGAACGT
ACCACGAACCTATGATAAAGATGGTTTCAAATTGAGAGCAGGTTGTCTTT
GCTTCAAAGATGAAACACAAAGAGAGGTCAGATTTTATTTCATTCTCATC
TTTACAATTTTATCTGTCATCAACCTTAACCACCAATAAGATTGGGTATC
GTATGTCGTTAAACATCTGTATCTGAGAGCAAAAACCCCTTTTATTGGGA
AACCGTTAGGGGATGACGCCACTCTTTCTCCGCTTACCCTTGATCGTTCT
CTATCCGGGGGGAGGGGCTACTAGTGTTTGCGGATGAGATCCTTAGAGAG
ACTTTTTTGAAAAATTTTATTCGATTTTTGAAAAACTCCCTACCCTTAGA
GAGACTTTTTCAAAAAAAATTTGTAGATCGTTAATTTTCAAACCCTTAGA
GAGACTGATTAAAATTTTTCTGATTTTTGTGACCCTTAGAGAGACTTTGA
AGGGTGAAAAAAGCGACCCTTACCGTCCGCACACACCCAGCACCTATTTT
TGCCCCCTCCCGGGTTCTCTTTGATTGCTGAGTATTAAGCAGAGAGGCAT
CAAAGATCCTTGGTATGACCTAGTCGAGGATAGAAGAAGATCTTGCGCAC
TGTAGCCATATCTCGGGGGGGGGGGGGGCTTTGGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGTACTTAGGCAAATGGA
GGGTACGGTATGTGCCACCCTTAAGGGTACCTTATTTTGACTTCCAAAGT
CCCGCTAAGGGGTCGGAAAAATCAGAAAATATAATTTCAGTCCCACTAAG
GGTCGGAAAAATAGTAAAATTTCAACTTTTTACCCCCTGAAAGATCGAAA
TTTGGTCAAAATTGGTAAATTTGTCCCGCTAAGGATCGTTAAACTCTCAA
AATTTTCCTTTGTATTCTACTTTTTAGTCCCGGCAAGGGTCAAAAGTTCG
AAAGTCGGGCGGCACCCCCCCCCCGTCAGCTCGCAACCCTAGTACCCCCC
CCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCC
CCGAGCCATATGCTCTTTACATTACATCATTTGACCCAATTAAACTTTTC
AGTTAGTTAGTGTTTACAGGTGTAGTAATAGCCGGAAGTAAAGCTAATTT
TCTGCTTTAGGCGAGACCAATTTAATTTGTTGTTCTACGGGCAGATCGTT
AGTAAAATATGGGTCGGTCGGTCGGTAAAATAAAAATAGATTTTTCATTT
ATCAGGGTTCTTAAAGTACCGAAAATGTTTTCCAAAAAATATCTGGTTCA
AAAATTCGCTTTTTTTATCTTCGATGAAGATCATGATAAAATCTTATAGT
GTATGGAATGCTTGATTTTCTAAATTTTTCAATTTCTTGAATTCATTTTC
AGCTTTATTCAATTTTGATTCTTACAAATAATTAGTGTGTAAAATATATT
GTAGTGGAAATTCAATATTATTATTTTTTTGATTTTAGCAAATATAGGGT
CGGTCGGGCCCGTAGAACAACAAATTAAATTGGTCTCGCCTTATGGATAT
TTTTTAGAATCTTTGAACTTTAGACCTACCTACCCTTACGTCTAAATATC
TTGGCATCTAAACTGTCTAGAATGTATATCTTGTACAATAGAAAAGAAGC
TTCGGAAATTGTACTCGCAGGTTGCATAACACCTCTTGAATTGTATAAAA
GTTGTGCCAGCATGACTTGCTGAAAGCAAAACAAGTTATGTAATACCTCT
GAGAAAAATTATTAACTTTAGAAGTAAGGCATTTTTATTGTTGTTTTTTT
TGGCGCTACACTTTAGAACAAGTTCGGAGTTAAGTTGTTTATATTTTGGA
AACCCGGTTGAACTCTTGTACGCCCCTCCTTATGTTTTGAGCAACTTTGT
AGTTCATCATTTTAAGACCCTGTCATACCTACTGTCTCGACTATTCCCGT
CTCAGCCCTCCCACCCACCTTAGGGGAGAGTTACTCAATGATCAACTAAA
GAAGACAAAACATAAAAACGGACATGAAAACAATCACCCTTTCACTATCA
ATATTTTTGGTACCCTGGTGGAGGTCCTTTAAATTAACCCATGTCCGTTC
GTCCGTTCGTTCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATT
AGTTTTTTCTGATTTTCGGCACAATGGTGCAAAATGGCAATGCCCAAAAT
GTGACGGAGCCCGATTTTCGAAAAAAAATTTTTGCCGGAAAAACTGTTTT
TTTGGCATTTTCTCGAGATTTTATCATTAGTTTTTTCCGATTTTTTGCTC
AAAGATGCGTATTAACAATGCACTAAACATGGCCAAGTCTGATTTTTGAG
AAAAAAAATTTTTCGGCGGAAAATGCCGGAAATAAACAGTATTTCTTGAA
TTTCTCAAGCTGTACTTTGAATTTTTTTATGAAATTTTGCACACTGATGC
AAAATGACAATACCTAGAATGTGATGGAGCCTGATTTTCGAAAAACATTT
TTTTCCGGCCGAAGATGCCGGAAATTGCCCTTTTTCTGGGTTTTCATTGG
ACTTTTTCCTTATAATTGGTTGTTTTTTTCATTCCAAAACATTATTAATA
GCAATGCCCACCATCAAGCATGTTTCGATTTTCAATAAAATTGATTTTTG
AAGCCGGAACTACTTAAAAATCGCTGGAACAACTTATTTTCGCCGGAAAG
ACAGTATTTCTTGAATTTCTCGAGCTGTACTTTATATTTATTATGAAATT
TTGCACACTTATGCAAAATGACAATACCTAAAATGTGACGGAGGCCGAAA
AAAATTTCGCCCAAAAATGCCGAAAGTATGCCGGAAAACCGGTTTTTTGA
CATTTTCTCGNCCCGATTTTCAAAAAAAAATTTTCGGCCAAAAATGCCGG
AAGTTTGCCGGAAAACCGTTTTTTTGCCATTTTCTCGAATTTCATCCTTA
GTTTTTTCTGATTTTTTGCAGAAAGATGCGTATTCGCAATGCTCAAAACA
TGGCCGAGTTCGATTTTTGAGAAAAAACTTTTTCCGGTTGAAAATGCCGG
TAATCGCCGTTTTTGCAGATTTTCATTGGATTTTTTTCCTTATATTTCTA
TGTTTTTCACACAAAAACATTATTAATAATAATGCTCACCATCAAGCATG
ATTCAATTGTCAATAAAACTGATTTTTGTGACCAGAACTTTCTAATTATT
TCTTCCCTACAACCCTTCCCTCTACCCCCATCAACAATCAATGATGAATT
TTAATGCTTTATGCATTTTCGCTAAACGTATTATTTTCTGACTAATTTTT
TTTTATTGTTCTCCTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTC
CATTCAACATCTAGCTTGTTCATTCTGAAGGCAATCTTCAGACAGAATCC
TGGACGGCATGAAACTTTGAGTTAAACACGTTTTCTTTACTCAAACTAAT
ATTCTTCAGTTTGTATGTTTGTTTTTAGGTATTGCTAGTGACTAGTTCAA
AAGATACGGATTTGTGGGTTGTACCTGCCGGAGGAATCGATCCGGGTGAA
TCACCTGAACAAGCCGCTGTCCGAGAGGTCGTGGAAGAGGTAAATCTTTC
TTTGTTGTATAAACGTTTTTTTTCATATATGCTAGAGATCATTGACTGAT
AATCCCGGGATTTTTGTTTGAGAGATGTTGGGTATAGACGAATCGGACCA
AAATGAGCCCCCTCAAAAGCCCATCTTGAATTCTATCACGTATCTTTGGA
TAGTAATTCTATGAATTTCTGATTCCTTTTTTACAGGCAGGGGCGATAGG
AAAGATTGGGACATGTCTTGGTGTCTTCCAGAATGACAAATCAAAGTCAC
AAACGTATATGTACACAATGATCGTTAAAAACCTCGTCGAACCAAAAGGT
TAGTGTGCTAATGAGTCCTGGCGGAGATGATTACTGCATTCATGATTTTC
TCTCTTCTTCAGATGCTTAATTTGAACCATCTAACTGTACTCTAGGGTTT
CAGGCCAATCCCAGAGCAGTGGGTACGTTATGTTTTGGAGTTCTTTACTA
AAAGATACCTGGGAATATTTCCGTAAAAAAACACAAAAACAGAGAAAATT
TCATTCATTGCAATGTTGGCTGTTTATGAGGAAAGTTATATAATTTTATG
GAGCTATTACAGTGGTGCATAAATAAACGATCTCTAAACATTTTAAATAT
TTTTCATTTTCTACCATTCAGAAAACAAAGACCGTAAATGGTTCATGCTG
AAGGACGCAGTGACGAAACTCAATCACCGTCCAATCCAACAGTCGTATTT
GACCAGTGTCATCTCTACCAATCAAAACAAAGATCCTAAAGTTAACGTTT
ACTCGATCGGTAACCTTCTACCCAAGCGATGATGGTGTTGGAATCAGACT
TGAGAAATTTACCCCTTGTACATATGGAGAATGTTTTTTTATATGCAATT
TTTCTTGATGGATGGGCCATGATAGTGTAGATTGTAATATTTCTAGGATG
CTTATAATGTCACTTCTAAATGTGATTCTTTCTGAGGATGGTTTTTGCTT
GATCTATTACTTTATCCTGTCAAATCATGACGCAATTTTTTTTTAAGTCG
GTATTTCAACAGCTACTCCGCCCTTGCTATTCCAGCCTTGCTATTAAGCT
AAAGTCAGCCAATTATATCTGTTATGTGTCACCTTTTCGAGTTGCACAGT
TTGAGAGATTGAGGCTTGCTTCTTGTGGTGTTTCCTTGTGGTGTTTCCTT
GAAACTTTATCGTTCGCAGTGTGGAGATGTAAAGCTTTTCTTATAGGGAC
TCAATGTTTGTATATGGGATAAATTTTTATTCGCTGAACTGGAAATTGGT
TCAAAGCTAATAGTTATTTTTTTCGCTGGATAAAGTTGAGGAAATACTTT
TTGAAATACAACTTGTGAAAATTGGTTTTGATAGAAAAATCATAACAGTT
TTTCTCGCTTTTAATAAATGAAATTTTCTCATCATTCGAAGAAATACGAA
AGAATTTTGATGAAAAGAAAGATATCTGAAAAAAGAAATATGGTATAATT
TTATTTTTATTATTTTTGTTTTATATAGGTATAAGTATATCAATAATATT
TTATAGTATTTGTGGTCAGGAAAATATGTCTTGAGAAGATATATCGAACA
AATTGGTTGTATTACGA

Coding sequence (CDS) from alignment at sc0000119:124445..142011-

>TCONS_00011024 ID=TCONS_00011024|Name=TCONS_00011024|organism=Clytia hemisphaerica|type=CDS|length=1992bp|location=Sequence derived from alignment at sc0000119:124445..142011- (Clytia hemisphaerica)
AAAACAAAGACCGTAAATGGTTCATGCTGAAGGACGCAGTGACGAAACTC
AATCACCGTCCAATCCAACAGTCGTATTTGACCAGTGTCATCTCTACCAA
TCAAAACAAAGATCCTAAAGTTAACGTTTACTCGATCGGTAACCTTCTAC
CCAAGCGATGAGCAGGGGCGATAGGAAAGATTGGGACATGTCTTGGTGTC
TTCCAGAATGACAAATCAAAGTCACAAACGTATATGTACACAATGATCGT
TAAAAACCTCGTCGAACCAAAAGGTATTGCTAGTGACTAGTTCAAAAGAT
ACGGATTTGTGGGTTGTACCTGCCGGAGGAATCGATCCGGGTGAATCACC
TGAACAAGCCGCTGTCCGAGAGGTCGTGGAAGAGATGACGACTAAACAAG
TGAAGATTAAGAATAGGAACGTACCACGAACCTATGATAAAGATGGTTTC
AAATTGAGAGCAGGTTGTCTTTGCTTCAAAGATGAAACACAAAGAGAGAA
AACAAAGACCGTAAATGGTTCATGCTGAAGGACGCAGTGACGAAACTCAA
TCACCGTCCAATCCAACAGTCGTATTTGACCAGTGTCATCTCTACCAATC
AAAACAAAGATCCTAAAGTTAACGTTTACTCGATCGGTAACCTTCTACCC
AAGCGATGAGCAGGGGCGATAGGAAAGATTGGGACATGTCTTGGTGTCTT
CCAGAATGACAAATCAAAGTCACAAACGTATATGTACACAATGATCGTTA
AAAACCTCGTCGAACCAAAAGGTATTGCTAGTGACTAGTTCAAAAGATAC
GGATTTGTGGGTTGTACCTGCCGGAGGAATCGATCCGGGTGAATCACCTG
AACAAGCCGCTGTCCGAGAGGTCGTGGAAGAGATGACGACTAAACAAGTG
AAGATTAAGAATAGGAACGTACCACGAACCTATGATAAAGATGGTTTCAA
ATTGAGAGCAGGTTGTCTTTGCTTCAAAGATGAAACACAAAGAGAGAAAA
CAAAGACCGTAAATGGTTCATGCTGAAGGACGCAGTGACGAAACTCAATC
ACCGTCCAATCCAACAGTCGTATTTGACCAGTGTCATCTCTACCAATCAA
AACAAAGATCCTAAAGTTAACGTTTACTCGATCGGTAACCTTCTACCCAA
GCGATGAGCAGGGGCGATAGGAAAGATTGGGACATGTCTTGGTGTCTTCC
AGAATGACAAATCAAAGTCACAAACGTATATGTACACAATGATCGTTAAA
AACCTCGTCGAACCAAAAGGTATTGCTAGTGACTAGTTCAAAAGATACGG
ATTTGTGGGTTGTACCTGCCGGAGGAATCGATCCGGGTGAATCACCTGAA
CAAGCCGCTGTCCGAGAGGTCGTGGAAGAGATGACGACTAAACAAGTGAA
GATTAAGAATAGGAACGTACCACGAACCTATGATAAAGATGGTTTCAAAT
TGAGAGCAGGTTGTCTTTGCTTCAAAGATGAAACACAAAGAGAGAAAACA
AAGACCGTAAATGGTTCATGCTGAAGGACGCAGTGACGAAACTCAATCAC
CGTCCAATCCAACAGTCGTATTTGACCAGTGTCATCTCTACCAATCAAAA
CAAAGATCCTAAAGTTAACGTTTACTCGATCGGTAACCTTCTACCCAAGC
GATGAGCAGGGGCGATAGGAAAGATTGGGACATGTCTTGGTGTCTTCCAG
AATGACAAATCAAAGTCACAAACGTATATGTACACAATGATCGTTAAAAA
CCTCGTCGAACCAAAAGGTATTGCTAGTGACTAGTTCAAAAGATACGGAT
TTGTGGGTTGTACCTGCCGGAGGAATCGATCCGGGTGAATCACCTGAACA
AGCCGCTGTCCGAGAGGTCGTGGAAGAGATGACGACTAAACAAGTGAAGA
TTAAGAATAGGAACGTACCACGAACCTATGATAAAGATGGTTTCAAATTG
AGAGCAGGTTGTCTTTGCTTCAAAGATGAAACACAAAGAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006178XLOC_006178Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011024-exon-sc0000119-1575043694:141692..142011TCONS_00011024-exon-sc0000119-1575043694:141692..142011Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1575043694:129686..130000TCONS_00011024-exon-sc0000119-1575043694:129686..130000Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1575043694:126023..126133TCONS_00011024-exon-sc0000119-1575043694:126023..126133Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1575043694:125714..125825TCONS_00011024-exon-sc0000119-1575043694:125714..125825Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1575043694:124445..125390TCONS_00011024-exon-sc0000119-1575043694:124445..125390Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1510915933:141692..142011TCONS_00011024-exon-sc0000119-1510915933:141692..142011Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1510915933:129686..130000TCONS_00011024-exon-sc0000119-1510915933:129686..130000Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1510915933:126023..126133TCONS_00011024-exon-sc0000119-1510915933:126023..126133Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1510915933:125714..125825TCONS_00011024-exon-sc0000119-1510915933:125714..125825Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1510915933:124445..125390TCONS_00011024-exon-sc0000119-1510915933:124445..125390Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1491911889:141692..142011TCONS_00011024-exon-sc0000119-1491911889:141692..142011Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1491911889:129686..130000TCONS_00011024-exon-sc0000119-1491911889:129686..130000Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1491911889:126023..126133TCONS_00011024-exon-sc0000119-1491911889:126023..126133Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1491911889:125714..125825TCONS_00011024-exon-sc0000119-1491911889:125714..125825Clytia hemisphaericaexon
TCONS_00011024-exon-sc0000119-1491911889:124445..125390TCONS_00011024-exon-sc0000119-1491911889:124445..125390Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011024-proteinTCONS_00011024-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:124445..142011 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.7688	35.6375	12.542	7.17006	78.4397	54.1857	106.981	109.418	85.3594	81.7712	62.6029	64.8695	59.3059	52.5871	40.0256	38.7382	50.945	71.762	60.9566	59.9268	97.8518	96.9889	79.0353	84.8158	95.2391	92.8208	75.8833	65.263	71.6449	58.8335
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020476Nudix_hydrolase
IPR000086NUDIX_hydrolase_dom
IPR020084NUDIX_hydrolase_CS
IPR015797NUDIX_hydrolase_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
Blast
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BLAST of TCONS_00011024 vs. Swiss-Prot (Human)
Match: NUDT3 (Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Homo sapiens GN=NUDT3 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.404e-31
Identity = 71/162 (43.83%), Postives = 104/162 (64.20%), Query Frame = 3 
Query:  537 VKIKNRNVPRTYDKDGFKLRAGCLCFKDETQREVLLVTSSKDTDLWVVPAGGIDPGESPEQXXXXXXXXXXGAIGKIGTCLGVFQNDKSKSQTYMYTMIVKNLVEPKEN-----KDRKWFMLKDAVTKLN-HRPIQQSYLTSV---ISTNQNKDPKVNVYSI 995
            +K+K+ N  RTYD DG+K RA CLCF+ E++ EVLLV+SS+  D W+VP GG++P E P  AAVREV EEAG  G +G  +G+F+N + K +TY+Y +IV  ++E  E+     + R+WF ++DA+  L  H+P+Q SY  ++    S N         YS+
Sbjct:    2 MKLKS-NQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSV 162
The following BLAST results are available for this feature:
BLAST of TCONS_00011024 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUDT32.404e-3143.83Diphosphoinositol polyphosphate phosphohydrolase 1... [more]
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