TCONS_00011024-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00011024-protein
Unique Name	TCONS_00011024-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	165

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00011024-protein ID=TCONS_00011024-protein|Name=TCONS_00011024-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MTTKQVKIKNRNVPRTYDKDGFKLRAGCLCFKDETQREVLLVTSSKDTDL
WVVPAGGIDPGESPEQAAVREVVEEAGAIGKIGTCLGVFQNDKSKSQTYM
YTMIVKNLVEPKENKDRKWFMLKDAVTKLNHRPIQQSYLTSVISTNQNKD
PKVNVYSIGNLLPKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_006178	XLOC_006178	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00011024	TCONS_00011024	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR020476	Nudix_hydrolase
IPR000086	NUDIX_hydrolase_dom
IPR020084	NUDIX_hydrolase_CS
IPR015797	NUDIX_hydrolase_dom-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020476	NUDIX hydrolase	PRINTS	PR00502	NUDIXFAMILY	coord: 51..65 score: 45.16 coord: 65..80 score: 48.23
None	No IPR available	GENE3D	3.90.79.10		coord: 13..141 e-value: 7.6E-26 score: 90.1
None	No IPR available	CDD	cd04666	Nudix_Hydrolase_9	coord: 24..133 e-value: 1.35383E-32 score: 113.094
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 24..135 e-value: 5.3E-18 score: 65.2
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 21..143 score: 13.5
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 56..77
IPR015797	NUDIX hydrolase domain-like	SUPERFAMILY	55811	Nudix	coord: 23..134

Blast

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BLAST of TCONS_00011024-protein vs. Swiss-Prot (Human)
Match: NUDT3 (Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Homo sapiens GN=NUDT3 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.592e-44
Identity = 71/162 (43.83%), Postives = 104/162 (64.20%), Query Frame = 0

Query:    6 VKIKNRNVPRTYDKDGFKLRAGCLCFKDETQREVLLVTSSKDTDLWVVPAGGIDPGESPEQAAVREVVEEAGAIGKIGTCLGVFQNDKSKSQTYMYTMIVKNLVEPKEN-----KDRKWFMLKDAVTKLN-HRPIQQSYLTSV---ISTNQNKDPKVNVYSI 158
            +K+K+ N  RTYD DG+K RA CLCF+ E++ EVLLV+SS+  D W+VP GG++P E P  AAVREV EEAG  G +G  +G+F+N + K +TY+Y +IV  ++E  E+     + R+WF ++DA+  L  H+P+Q SY  ++    S N         YS+
Sbjct:    2 MKLKS-NQTRTYDGDGYKKRAACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFENQERKHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYHKPVQASYFETLRQGYSANNGTPVVATTYSV 162

The following BLAST results are available for this feature:

BLAST of TCONS_00011024-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00011024-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NUDT3	2.592e-44	43.83	Diphosphoinositol polyphosphate phosphohydrolase 1...	[more]

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TCONS_00011024-protein (polypeptide) - C. hemisphaerica