TCONS_00011000 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011000
Unique NameTCONS_00011000
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011000 ID=TCONS_00011000|Name=TCONS_00011000|organism=Clytia hemisphaerica|type=transcript|length=120bp
CCAGAATGCTGCACAAAGTGTGAGCACTAATGATACCAGCATGATGATGG
TAGCgataattcttttttctttgaacatatttttgatctGTTTTGCTGGT
CCAACCAAAAACAATGTGCT
Run BLAST on NCBI

transcript from alignment at sc0000119:344657..345212+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011000 ID=TCONS_00011000|Name=TCONS_00011000|organism=Clytia hemisphaerica|type=transcript|length=556bp|location=Sequence derived from alignment at sc0000119:344657..345212+ (Clytia hemisphaerica)
CCAGAATGCTGCACAAAGTGTGAGCACTAATGAtacctaaaaacaaaaaa
gattagAATACAAAAAGTGAGTGACAAGTCTCAATCACAGATCTATGAGA
AACCCAAAGAAATCATGGAATCACAAATTCGCTGGATGTGATTACTcgga
aaaagttcacgtgatttaattcccatgttacttgctttacaacttagtTA
TTATTTTACCAATAAAAATAATGTAGGTTATGTAGCAAGCACATAACCTC
GTTGTCAAAGCGGATGGGCAAATTTCAAAATCGTTCTACTTTGACAACGA
CGAAATTTATTGAGTGACTTAAGACTTCGTTCTGCAACCCGTGAATTGAT
TAAATGACGTGCTTTGTATCAATCAAGCTCAAAGATTCTCTGAAATGAGA
CCTTGTGTACTTATCAAGGACTTGTATTTAAGCTCTCATCTTTATCACAA
CATCAAAAAATAGAACACATACCAGCATGATGATGGTAGCgataattctt
ttttctttgaacatatttttgatctGTTTTGCTGGTCCAACCAAAAACAA
TGTGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006167XLOC_006167Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011000-exon-sc0000119-1491911889:344657..344688TCONS_00011000-exon-sc0000119-1491911889:344657..344688Clytia hemisphaericaexon
TCONS_00011000-exon-sc0000119-1510915933:344657..344688TCONS_00011000-exon-sc0000119-1510915933:344657..344688Clytia hemisphaericaexon
TCONS_00011000-exon-sc0000119-1575043694:344657..344688TCONS_00011000-exon-sc0000119-1575043694:344657..344688Clytia hemisphaericaexon
TCONS_00011000-exon-sc0000119-1491911889:345125..345212TCONS_00011000-exon-sc0000119-1491911889:345125..345212Clytia hemisphaericaexon
TCONS_00011000-exon-sc0000119-1510915933:345125..345212TCONS_00011000-exon-sc0000119-1510915933:345125..345212Clytia hemisphaericaexon
TCONS_00011000-exon-sc0000119-1575043694:345125..345212TCONS_00011000-exon-sc0000119-1575043694:345125..345212Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:344657..345212 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011000 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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