TCONS_00010829 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010829
Unique NameTCONS_00010829
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1029

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010829 ID=TCONS_00010829|Name=TCONS_00010829|organism=Clytia hemisphaerica|type=transcript|length=1029bp
ATATCATTTTCATCAGCAGAGCacgctttgaaaggtgaaaaggtTTAAGA
ATGAAGATTTTTGCATGTTTACTGTTGCTCCTGTCCATCTATATGGTTAA
TGGAGACAACACCAGTGATATCAAGACGTTGAAAAGCAGTCTCCAGCTTC
TGTTAAAACGCATCGAATTAAAATCCTCTTATTGTTTTGCGCAAGCTCAA
GGACAATGTGGCACGTGCATTTGCAAAGACGATTTCAACCTTCCCAAGAA
GTATTACTGTGATTGCCGGAACCAATCACCACAACGCGATTGCCTTGCAC
ATCGACAAAATGGGATGAAGATTGACGGTTATTATACAGTCACAATGAAT
GGATATCGAACGACTCAAGTTTATTGCGATCAAACAACTTCAGGAGGCGG
TTGGACCGTTATACAAAGACGTATGGATGGATCTGTCAATTTCTACAGGA
CTTGGGAGCAATACaagATCGGGTTCGGACAACTTCACCACGAGTTCTGG
CAAGGAAACGAAGAAATACACGTCCTTTGCGCTCAAGCTCTTTACCCAAA
AGGCTCCGAGGCTATGATTCAAATCAAAGTGCAAGGTCTTGATTACCTAT
TCACAAACCAATACTCGCATTTCGAAGTCGGCAGTGAAAGAAGTAATTAC
TTGTTACAGGTGAGCGGGCCGTCTGGTCATTGGCATCCGGAATATTTCAC
CcgatatcaaaacaaagttgaatTTTCGACTTGGGATAAGGACAACGACG
GAGCTACATCTTACAAATGCGCTTACACGCATCAATTTTCTGGTTGGTGG
ATCAATGGCTCAAAGAATAGTTGTACAAATGATGAAGCAGCCAGTCACAA
TTTGAACGGCCCGTACGATAAATACCGTACAAAGAATTGGTATAATCGGA
TTACCTTTTTCAGTCAAAACCAGCCGTGGTTCAGTGAAATTAAGGTTCGC
CGTAAAATTTAGTATTTAAACTCAAGTgtaaagtttgatttttgaagcaA
AAGATATAATGAGAAATCATCAATAAACC
Run BLAST on NCBI

protein sequence of TCONS_00010829-protein

>TCONS_00010829-protein ID=TCONS_00010829-protein|Name=TCONS_00010829-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MKIFACLLLLLSIYMVNGDNTSDIKTLKSSLQLLLKRIELKSSYCFAQAQ
GQCGTCICKDDFNLPKKYYCDCRNQSPQRDCLAHRQNGMKIDGYYTVTMN
GYRTTQVYCDQTTSGGGWTVIQRRMDGSVNFYRTWEQYKIGFGQLHHEFW
QGNEEIHVLCAQALYPKGSEAMIQIKVQGLDYLFTNQYSHFEVGSERSNY
LLQVSGPSGHWHPEYFTRYQNKVEFSTWDKDNDGATSYKCAYTHQFSGWW
INGSKNSCTNDEAASHNLNGPYDKYRTKNWYNRITFFSQNQPWFSEIKVR
RKI
Run BLAST on NCBI

transcript from alignment at sc0000117:335909..344272-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010829 ID=TCONS_00010829|Name=TCONS_00010829|organism=Clytia hemisphaerica|type=transcript|length=8364bp|location=Sequence derived from alignment at sc0000117:335909..344272- (Clytia hemisphaerica)
ATATCATTTTCATCAGCAGAGCACGCTTTGAAAGGTGAAAAGGTTTAAGA
ATGAAGATTTTTGCATGTTTACTGTTGCTCCTGTCCATCTATATGGTTAA
TGGAGACAACACCAGTGATATCAAGACGTTGAAAAGCAGTCTCCAGCTTC
TGTTAAAACGCATCGAATTAAAATCCTCTTATTGTTTTGCGCAAGCTCAA
GGACAATGTGGCACGTGCATTTGCAAAGACGATTTCAACCTTCCCAAGAA
GTATTACTGTGATTGCCGGAACCAATCACCACAACGCGATTGCCTTGCAC
ATCGACAAAATGGGATGAAGATTGACGGTTATTATACAGTCACAATGAAT
GGATATCGAACGACTCAAGTTTATTGCGATCAAACAACTTCAGGAGGCGG
TTGGACCGTTATACAAAGACGTATGGATGGATCCACAAATTTCTTCAGAA
GATGGAATGAATATAAGGTAAATTGTGACTCTTCTTCCCTTTTTCAGTTC
TTTAAGAATATTTCTGTTCAAAATACTCTTCCCAGTCCTTTTTGAATTGT
TGCTGCTTTTTAATCATGCAAATGCCCTTTATAGGTTTTTTGTAGATATT
ATTCATTGACTCTTATTGGTGGGCAGCTTTTATGACAGCGTGCATGATTT
TAATTTTGTTAAATACATCAATGAATTTTTAACATGACCTCCACCTTGTT
GTCAAAGGACCTTTGTTATTTCATATTTTTTGTTACATTTCTTTCAGGTT
GGATTCGGTAAACTTCATCGAGAATTTTGGTTGGGCAATGAAAACATACA
TCTTTTGAGTCTACAAGCTGTTTATCCGAAAGGCTCAGAATTAATGATAA
ATATGAGGCTGCAAAGTTACACAGGTAATTATTGGAACCGTTACAGTCAT
TTCCAGGTGGACAGTGAAAGAAGCCATTATCTTCTCCATGTTAGTGGACC
CTCTGGGAATCTCCACCAGACCTACTTCACATCCTACCAAAACAAGGTTG
AATTTTCAACATGGGATAAAGACCGAGACGGTTCGTCTTCTTATAATTGT
GCTAGAGATTACCAATTCTCTGGTTGGTGGATCAATGGGGCGGGCAATAG
TTGCACAGGTTACCAAGCAGCTGGCTTTAATCTAAATGGTCCATACGATA
AGTACCGTACTAGAGGGTGGTACCAGAGGATCAATACATACGCTAAATAT
CATCCAACCTTTGTTGAGATGAAAGTACGTCGCTTGTAAAAATTATATTG
ATTTGTTTCATTACAATTTTTATTACAATAGAATCCAAACTATAAGCTTA
AATAATTTTGTACTTTATTGTTGTTACATTTCCCTAAAGAGGGTCGCTCT
CGTGATTAATGAAAGTCTTTCTCAATTTTCATCTTCAATTTTTATAAAAT
CATTAGTCAGAAAGTCCTGTCAAAAAAAGCAATATATCTAGTAAATCCAG
TAAAGTAAATTTTGACTCATGCTGGGGTGTTCTTAATTTTATGAAATTTT
CAGGCTTAAATGTTCCTGCAATGTCCTTAATACCAAGACGCCTAGTTTCT
TTACTTAAAAACTAAAAATCGGCTTAAACTGTTAAAATCTGTTAAAATCA
GTACTTTCTTTAGTAATCTCTGAAATTTGAGGTTCCAGATTGTTCTCGAT
ATTTGTTCTTAGGTTTTTGCAAATTTTCAGGCGATGCTGTTCTTATAAAA
AAGCGTCAGGAGAAATTTTATCCTATATGAGTGAAAGGGATACTTTTAAG
ACAGGGTTTTCTGTCATAACCAGACATCCCAGCTGGCACACAACGTTGTT
TTAACGTTCAAATAACGTTATTTGGACGTTATGAGTGCCACATGGACGTT
GTTTTGACGTTGTGTGCAGATTCCATCTTGTAAGTATTCTGCAATATTGT
TTTAAAATGTAAAAGTGTTTTCAACATTATTTTGGTTTATTCGTGAGTAG
ATTTATCATATTTTATCAATAGGGTTTGAGGTACTATATTGAGTTGTTCC
TTTTAATTCATGATTTTCATGACGTAATGTTTTCAACGGAAACACCCCGG
TTATAGCCAGTATTGGCTAATTTAAATTAGACAGAAGTTGTATATAATTT
GCCACTCCTGTCAAAAACCGGGGTCTTTCCGTAGAAAACATTACGTCATG
AATATCATGAATATCCTTACAGCTAGGTTTGATGGACCTTTTTAGGCCAA
AAATAATTCTTGAATATGTGCGGATAACCCCTGGAAAATACAAAATTTGC
AAAAATAAATGCTGGAAAAATTCTTCTTCATACCTTAGAGTGAGGGCAGA
CGAACTAAAATCAGTCTTCCCCTTGGAAGTCTTAGAATAATCTAAAACAA
AATGATAAATAAAAGTAAGCATTCTCAGACCCTGGAAACTTTTCTCATTG
AGTTTCAAGCCCGAAGGACTAGAGGCGAATCTTTAACCCTTCTCAGGCTA
GAGAAATTGAAGCTACTTATTTCCCATCCAAAACGGGCATAGAACGCGCC
GTAATCATGACGACGGATTGTATCTAAAGGTTCCTTTGTTTTGGAGGACT
ACATTTTTTTAAATCTAGCGATAGATTTTAGTTTCAATCCGGCGTTTGTG
TAAAAACTACACACGGGCGTTCTGGATGGGAAATGAGTGGTTTCATTTCC
CATCCAGGAGTCTCGCCTCTAGCCCTTTGAGCTCGAAACTCAATGATTTT
TCTTAAGATCATCCCCCCCCCTGGAAAAGTTCGTTCAACCCATATCTCCA
TATCTGGATATAAAATGGAATGGCCCATTATAGAGTCAAAACTTTGACAA
ACAAGCACAACCTTGCTGACCAGTTTTAAATTCTTAAAGACACGTATTTT
GTTTCTTTCGTCTGCACTGATGTAAAGTTTTTTGTCAAATTTGCATAAAG
ATGAAACCTAGTATGAAAGCATTTGAGAGGGAGAGTGTCAATGGTTGAAA
TTATGGCGATCATTCAAAAAAAACTTCCTCGCAGATGCAAAATATAGTTA
TTGTGAATCTAAATTTGCTAAAGTTGAGAAAGTAAATTTGATACATAGTT
TTTTAAAAACCTTGAAAAACAACGAAGTGTACATGTACTGATAAAATTTG
AAATCACAACTTAGAAATAGACATGAAAGTCTTTTTAATAATTTTACTCG
TTTGGATATACGACAGTTCCTCGCCAGTGTGTGGGGACTCATCCAACGAG
ATAAATATTTTGAGAAGCGAGCTTAAACTATTATCAGCTAAATACAATAG
GCTTGCCGCACGAATAGATTTGAAATCTACATATTGTAGTCTCAATGCTA
AGGACAATAAATGTGGTCCTTGTATTTGCCGAGATGATTTTACAATGCCA
AGAAAGTATTATTGTGATTGCCGGAACCAGGAACCTCAAAGAGATTGTCT
AGGTCATTATAAAAATGGGATGAAAATTAATGGTTATTATAAAGTCAACA
TGAACGGAAATCGAATGACTCAAGTTTATTGTGATCAAACAACTTCAGGA
GGCGATTGGACCGTCATTCAAAGACGTATGGACGGATCCACAAACTTCTA
TAGAAAATGGAATGCATATAAGTNCCACAACGCGATTGCCTTGCACATCG
ACAAAATGGGATGAAAATTAATGGTTATTATACAGTCACAATGAATGGAT
ATCGAATGACTCAAGTTTATTGTGATCAAACAACTTCAGGAGGCGATTGG
ACCGTCATTCAAAGACGTATGGACGGGTCTGTCAATTTCTATAGAAAATG
GAATGCGTATACGGTAAGATTTTTACAATGTGACAAATATTTGTAGCACT
CATTTTGTCAGTTGATTTTTGAAACCCTTCAAGCAAAGTTGCTAGGCAAC
TTTAAGGAATTGTCCAGAATTGTCCTGTTTCATAGACTTAATTTATAGAC
AAATTCTCAAAAGTTCAGTATGTTTTCAATTTGTTCCCAATCAAAAATGT
TATTTTAAAAGGCTGAGGTAAAGAGACTTCGAATGGTGCCAAAGTTTTGT
CTAAAGCCCATTTAAATACCCTCAATCGAGATTTGGGGTGATTTGAAGTA
AATCGATGAAAAAGTTTCTGTTTTTTATTGAAAACAAGTGAGCTTTTGGG
AGTTTAGGCCTTTGAAAACTATTTAAGCTTAGGGATAATCTATACTCAAA
GTCTTAGGTAAAATGAGAAAAATGCTTTAATTCTCGATGGTTTAATATTA
CGTTAGAAATTTTGCCACTTTCGATTATTATTTTCTCAGTCTGATGATGA
CCTAGCCTAAAAATCTAAGCTAGTTTGATTCAGCCACCAGGATAAATTTG
ATGGTAAGTTGTGACTGAATAACAGTGAATGACAGTATTCCAAGGCAAAC
TTAAAATCCGTAAATATAAAAAAATCTTTAAAGCGCCGAAAATGCTATAT
TGCCATTAGCCGTGTGTCCTAGACTTGTGAATACGGGCTTAGTTGACTAG
GCTAATGATAACCCTTACTACGAGGGTCAAAATAACAATTGTATAAAGAA
CGATCACAATGCAATCATTTTTGTATTTTATACCTAGATTGGATTCGGTA
AACNATAAAGAACGACCATATACAATCATTTTTGTATTTTACATTTCTGT
TTTACCTAGATTGGATTCGGTAAACTTCATCGTGAGTTTTGGTTTGGTAA
CGACAACATACACATTCTATCAGCACAAGCTGTTCTACCAAAAGGCTCAG
AACTCTTGATCCAACTTAAATTCGAAGGACATGGGGACCGCCTATACATA
ATCAATATTACGCCCACGTTCAAGTGGATAGCGAAAGAAGCAATAATTTG
ATACACTTAAGTGGCGGCACCGGCGGTTACGCATCATCCTTTGCGACATA
TCTCAACAAAGTGGAATTTTCGACTTTCGACCGAGACCACGATGGGTCAC
CGTCGAAGAATTGTGCACTTGATTATCAATTCTCTGGCTGGTGGCTGAAT
GGTGCCAAAGATACATGTTTAGACACCAGTCGAAATTTCAACTTGAATGG
TCCGTATGATAAATATCGTATGAGGAATTGGTACGGTAGAATTTCTTGGG
ACACACCTGATGCCTCTAGGAAACCAACCTTCTCAGAAATGAAGATCAGA
CGATTGCAATAACTGAATTATGTAATTACGAGACAATTTTCTGACAATTT
TTTCTTTCGTTCGTAGAAAAATAGAGAATTAAAAACATATGAAAAGTTAT
CTTTTTATTACAGTGTTCCTGAAGTGTGTTCAAAATTTTTAAGGATGGAA
ATGCTTTTTGTATTTGTAAAAAGTACCCTATTGTTCGAATCAAAGTATAT
TCTTGAAACCAACAACGTTCTTCTCTTTATTTTGGATGAAGATTTATGGA
TTTATACTGATGAATGAAATCTTTCTTTATGGCAATACCATATTTCACTT
TGGAGTCTCCATAACTCGAACACGAACGGGGAACACAAATGTGTTCGAGT
TAAGGAAACATTCGAGTTATAGAGGTTCGAATTAAAGAGACTCCACACTG
GGAAAAAATAAGAGAATATCTTGAAAACATGATAATTCCATATACATTAG
TACATATGGAAATATGACTTTTCTATGTTTCCAAAAGTTTGGAAATACAT
ATTTAATGGTATTTCCAGGATTGACATCATATTTCCACCGGTATCGGCAC
CGTTATGCTTTATCTTTAGGAAGGTTAAATATTTGTATACCAGGAAAATT
TCTAGAGACCTGGTATCTTAAAAGTTCGAAATTCTTTGTAGTTAACCGTG
AGCACGTATCCCCTTTGTTGACACCCTAAGCGTACCCACAGAAACATTTT
GGCAAAAACTGACAACTTTTTCGAAAACAATGCATACGTATAACAGAAAC
CTTTAAAAATTCTTGAAGCCTTCAGATCGTGTTGTTAACTTTTTGAGATT
TAAACCTAGAAATGTTCTTAAAATATTCTTATTTTTACAATTTTTCTTTT
TCCTATCTTGTGTGATTTTCTAAGAAAATGTGAGCCTGTGAAGCCTTAAA
TTGTTCTTAACATCTTAATATGGGCCATCGAAGGCTTACGTTCTTATATA
GTGTGTCCTTATAAAAAAAGTTAATACTTTACAGATCTGATGTGAAGAAG
GTTGGGTTCGATGAATCGTAACCCCACGTTTTCATGTAAATACAGCTGAA
ATAAAATTGACATTGCAATTGAAAAACTTTATATGTACATACTTCAAGAG
ATATACTTCAAAAACGTCCAACGCACAAACTTAAAAGAGTTCGAAGGCTG
ATCAAATAATATAACTAGTGATTTTCACATGACCAAGCCGACACACAACG
TTGTTTTAACGTTTATCTAACGTTCTAAAGATGAACGTTGAAACAACGTT
ATGTGCCAGCTGAGGAGTTAAAAGATTGCTTCTTCTTCTGTCAACAGGTT
TTTTTTAATTCTACGATGGAGCGTAAAGTATATCCATTTATAGGATATCG
TCTTCTAAAAGGCCTCCAACGCAGATAGTATATTCTCGGGCATAGAATCG
AAAATTGTCAAAAATACTTTTGATACAGATATTTAAAGTATTTCATCTAA
GCTGTCCATAAAAGTAGTTTTTATACTATCTTCGAAAAAGAAGATCCATA
AATCGCGACTTAGGAGCTGATTCTTGGAAAAGCGAAATGAAAATCTTTGC
GTTTCTATTGGTCATTCTACACTCAACCACGACCATCTCTGGTGATAATA
CAGCTGATATTCAACAACTGAAGAGTAATTTCCTTCTCCTACTCAACAAC
TACAGGGACATCCATAAAAAATATAGTACATTGCAGTCAAAGTACACTGA
CTTAGAGAAGAGTGTTAATCTAAAAGCATCTTATTGCCAGCTTAAGGCTC
AAGGCCAATGTGGAGACTGTGTTTGCAGAGATGACTTAACACTCACCAAG
AAATATTACTGTGATTGCCGGAACCAATCACCACAACGCGATTGCCTTGC
ACATCGACAAAATGGGATGAAAATTGATGGTTATTATACAGTCACAATGA
ATGGATATCGAACGACTCTAGTTTATTGTGATCAAACAACTTTGGGAGGC
GGTTGGACCGTTATACAAAGACGTATGGATGGATCTGTCAATTTCTACAG
GACTTGGGAGCAATACAAGGTAATTTTTCTTTTCATAATACGTTTTCTTT
TTTTAAAGATTAAACTTGATTATTTATCAATCTAGGTAAACAGGAAAGAC
AACCTCTTTCTCGATATCGAACTTAATCGAGCTTAGTCACAAAGAACCAT
CGGATGGGGGGCACTTGATTCAAAAACAACCATGCATAGAAAATCTAGTC
AAATTTGTGTAAATTCGGGCGAAAAATCGACGGGACCATTAAGGACCGCA
CGTACGGTCGGTTGTTTACCTTGAGTGCCCACTCCCACCCGGGAAAAAAA
GAATAAAAAGATGACTACTGATGTTAATGTATCGTGTTCTCTTTATCTCG
AACTTTCTCAATATACAGCTATACTATTCAATTTGGAGGTTCTTTTTAAC
TGAAGCAGCCAGAATAATTGTCCTAATTATAGAGACTCATAGAGACACAC
ACTGTAAGGTTATAACATAAGGAGCGATGACCAAGTGGTCAAAGGCGTCA
GCGTCTCAAACCAGGGATTCGTAGTTCGAATCCCCGCTCCTTCCAATGTT
CCGTTCAGTTCATAGATAGCCGAGCCGGCTGGCTGTGGACCCCGTGAAAA
CAATCGAAAGACTGTCTAAAAATCATAGATTACTGGGATATCCAAGTAAA
ATATCGTTTCTATCTATCTACCTTAAATTGTATTATTTTTTAATATTGGC
AGATCGGGTTCGGACAACTTCACCACGAGTTCTGGCAAGGAAACGAAGAA
ATACACGTCCTTTGCGCTCAAGCTCTTTACCCAAAAGGCTCCGAGGCTAT
GATTCAAATCAAAGTGCAAGGTCTTGATTACCTATTCACAAACCAATACT
CGCATTTCGAAGTCGGCAGTGAAAGAAGTAATTACTTGTTACAGGTGAGC
GGGCCGTCTGGTCATTGGCATCCGGAATATTTCACCCGATATCAAAACAA
AGTTGAATTTTCGACTTGGGATAAGGACAACGACGGAGCTACATCTTACA
AATGCGCTTACACGCATCAATTTTCTGGTTGGTGGATCAATGGCTCAAAG
AATAGTTGTACAAATGATGAAGCAGCCAGTCACAATTTGAACGGCCCGTA
CGATAAATACCGTACAAAGAATTGGTATAATCGGATTACCTTTTTCAGTC
AAAACCAGCCGTGGTTCAGTGAAATTAAGGTTCGCCGTAAAATTTAGTAT
TTAAACTCAAGTGTAAAGTTTGATTTTTGAAGCAAAAGATATAATGAGAA
ATCATCAATAAACC

Coding sequence (CDS) from alignment at sc0000117:335909..344272-

>TCONS_00010829 ID=TCONS_00010829|Name=TCONS_00010829|organism=Clytia hemisphaerica|type=CDS|length=2736bp|location=Sequence derived from alignment at sc0000117:335909..344272- (Clytia hemisphaerica)
ATCGGGTTCGGACAACTTCACCACGAGTTCTGGCAAGGAAACGAAGAAAT
ACACGTCCTTTGCGCTCAAGCTCTTTACCCAAAAGGCTCCGAGGCTATGA
TTCAAATCAAAGTGCAAGGTCTTGATTACCTATTCACAAACCAATACTCG
CATTTCGAAGTCGGCAGTGAAAGAAGTAATTACTTGTTACAGGTGAGCGG
GCCGTCTGGTCATTGGCATCCGGAATATTTCACCCGATATCAAAACAAAG
TTGAATTTTCGACTTGGGATAAGGACAACGACGGAGCTACATCTTACAAA
TGCGCTTACACGCATCAATTTTCTGGTTGGTGGATCAATGGCTCAAAGAA
TAGTTGTACAAATGATGAAGCAGCCAGTCACAATTTGAACGGCCCGTACG
ATAAATACCGTACAAAGAATTGGTATAATCGGATTACCTTTTTCAGTCAA
AACCAGCCGTGGTTCAGTGAAATTAAGGTTCGCCGTAAAATTTAGGCGGT
TGGACCGTTATACAAAGACGTATGGATGGATCTGTCAATTTCTACAGGAC
TTGGGAGCAATACAAGATGAAGATTTTTGCATGTTTACTGTTGCTCCTGT
CCATCTATATGGTTAATGGAGACAACACCAGTGATATCAAGACGTTGAAA
AGCAGTCTCCAGCTTCTGTTAAAACGCATCGAATTAAAATCCTCTTATTG
TTTTGCGCAAGCTCAAGGACAATGTGGCACGTGCATTTGCAAAGACGATT
TCAACCTTCCCAAGAAGTATTACTGTGATTGCCGGAACCAATCACCACAA
CGCGATTGCCTTGCACATCGACAAAATGGGATGAAGATTGACGGTTATTA
TACAGTCACAATGAATGGATATCGAACGACTCAAGTTTATTGCGATCAAA
CAACTTCAGGAGATCGGGTTCGGACAACTTCACCACGAGTTCTGGCAAGG
AAACGAAGAAATACACGTCCTTTGCGCTCAAGCTCTTTACCCAAAAGGCT
CCGAGGCTATGATTCAAATCAAAGTGCAAGGTCTTGATTACCTATTCACA
AACCAATACTCGCATTTCGAAGTCGGCAGTGAAAGAAGTAATTACTTGTT
ACAGGTGAGCGGGCCGTCTGGTCATTGGCATCCGGAATATTTCACCCGAT
ATCAAAACAAAGTTGAATTTTCGACTTGGGATAAGGACAACGACGGAGCT
ACATCTTACAAATGCGCTTACACGCATCAATTTTCTGGTTGGTGGATCAA
TGGCTCAAAGAATAGTTGTACAAATGATGAAGCAGCCAGTCACAATTTGA
ACGGCCCGTACGATAAATACCGTACAAAGAATTGGTATAATCGGATTACC
TTTTTCAGTCAAAACCAGCCGTGGTTCAGTGAAATTAAGGTTCGCCGTAA
AATTTAGGCGGTTGGACCGTTATACAAAGACGTATGGATGGATCTGTCAA
TTTCTACAGGACTTGGGAGCAATACAAGATGAAGATTTTTGCATGTTTAC
TGTTGCTCCTGTCCATCTATATGGTTAATGGAGACAACACCAGTGATATC
AAGACGTTGAAAAGCAGTCTCCAGCTTCTGTTAAAACGCATCGAATTAAA
ATCCTCTTATTGTTTTGCGCAAGCTCAAGGACAATGTGGCACGTGCATTT
GCAAAGACGATTTCAACCTTCCCAAGAAGTATTACTGTGATTGCCGGAAC
CAATCACCACAACGCGATTGCCTTGCACATCGACAAAATGGGATGAAGAT
TGACGGTTATTATACAGTCACAATGAATGGATATCGAACGACTCAAGTTT
ATTGCGATCAAACAACTTCAGGAGATCGGGTTCGGACAACTTCACCACGA
GTTCTGGCAAGGAAACGAAGAAATACACGTCCTTTGCGCTCAAGCTCTTT
ACCCAAAAGGCTCCGAGGCTATGATTCAAATCAAAGTGCAAGGTCTTGAT
TACCTATTCACAAACCAATACTCGCATTTCGAAGTCGGCAGTGAAAGAAG
TAATTACTTGTTACAGGTGAGCGGGCCGTCTGGTCATTGGCATCCGGAAT
ATTTCACCCGATATCAAAACAAAGTTGAATTTTCGACTTGGGATAAGGAC
AACGACGGAGCTACATCTTACAAATGCGCTTACACGCATCAATTTTCTGG
TTGGTGGATCAATGGCTCAAAGAATAGTTGTACAAATGATGAAGCAGCCA
GTCACAATTTGAACGGCCCGTACGATAAATACCGTACAAAGAATTGGTAT
AATCGGATTACCTTTTTCAGTCAAAACCAGCCGTGGTTCAGTGAAATTAA
GGTTCGCCGTAAAATTTAGGCGGTTGGACCGTTATACAAAGACGTATGGA
TGGATCTGTCAATTTCTACAGGACTTGGGAGCAATACAAGATGAAGATTT
TTGCATGTTTACTGTTGCTCCTGTCCATCTATATGGTTAATGGAGACAAC
ACCAGTGATATCAAGACGTTGAAAAGCAGTCTCCAGCTTCTGTTAAAACG
CATCGAATTAAAATCCTCTTATTGTTTTGCGCAAGCTCAAGGACAATGTG
GCACGTGCATTTGCAAAGACGATTTCAACCTTCCCAAGAAGTATTACTGT
GATTGCCGGAACCAATCACCACAACGCGATTGCCTTGCACATCGACAAAA
TGGGATGAAGATTGACGGTTATTATACAGTCACAATGAATGGATATCGAA
CGACTCAAGTTTATTGCGATCAAACAACTTCAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006072XLOC_006072Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010829-proteinTCONS_00010829-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010829-exon-sc0000117-1575043694:343877..344272TCONS_00010829-exon-sc0000117-1575043694:343877..344272Clytia hemisphaericaexon
TCONS_00010829-exon-sc0000117-1575043694:337154..337224TCONS_00010829-exon-sc0000117-1575043694:337154..337224Clytia hemisphaericaexon
TCONS_00010829-exon-sc0000117-1575043694:335909..336470TCONS_00010829-exon-sc0000117-1575043694:335909..336470Clytia hemisphaericaexon
TCONS_00010829-exon-sc0000117-1510915933:343877..344272TCONS_00010829-exon-sc0000117-1510915933:343877..344272Clytia hemisphaericaexon
TCONS_00010829-exon-sc0000117-1510915933:337154..337224TCONS_00010829-exon-sc0000117-1510915933:337154..337224Clytia hemisphaericaexon
TCONS_00010829-exon-sc0000117-1510915933:335909..336470TCONS_00010829-exon-sc0000117-1510915933:335909..336470Clytia hemisphaericaexon
TCONS_00010829-exon-sc0000117-1491911889:343877..344272TCONS_00010829-exon-sc0000117-1491911889:343877..344272Clytia hemisphaericaexon
TCONS_00010829-exon-sc0000117-1491911889:337154..337224TCONS_00010829-exon-sc0000117-1491911889:337154..337224Clytia hemisphaericaexon
TCONS_00010829-exon-sc0000117-1491911889:335909..336470TCONS_00010829-exon-sc0000117-1491911889:335909..336470Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000117supercontigsc0000117:335909..344272 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.00160251	0	0	0	0	0	0	0	0	4.83096	7.57445	2.90027	6.773	2.21965	0	0.643375	0	0	0	0.706514	0.239316	9.15076	12.1715	0	0	1.65814	1.847
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
Blast
[Close]
BLAST of TCONS_00010829 vs. Swiss-Prot (Human)
Match: ANGL7 (Angiopoietin-related protein 7 OS=Homo sapiens GN=ANGPTL7 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.350e-28
Identity = 83/231 (35.93%), Postives = 120/231 (51.95%), Query Frame = 3 
Query:  288 DCLAHRQNGMKIDGYYTVTMN---GYRTTQVYCDQTTSGGGWTVIQRRMDGSVNFYRTWEQYKIGFGQLHHEFWQGNEEIHVLCAQALYPKGSEAMIQIKVQGLDY---LFTNQYSHFEVGSERSNYLLQVSGPSGHWHPEYFTRYQNKVEFSTWDKDNDGATSYKCAYTHQFSGWWINGSKNSCTNDEAASHNLNGPYDKYRTKNWY-NRITFFSQNQPWFSEIKVRRKI 959
            DC +  Q   +I G Y +  +   G    +V+CD  TSGGGWT+IQRR  G V+FYR W+QYK GFG +  +FW GNE IH L  Q           +++V+  D+   L   +YSHF +G+E ++Y L +   +G+   +   +Y N   FST DKDND     KCA   +   W+     N CT+      NLNG Y +    N + + IT++  +   +S  +V  KI
Sbjct:  130 DCSSLYQKNYRISGVYKLPPDDFLGSPELEVFCDMETSGGGWTIIQRRKSGLVSFYRDWKQYKQGFGSIRGDFWLGNEHIHRLSRQP---------TRLRVEMEDWEGNLRYAEYSHFVLGNELNSYRLFLGNYTGNVGNDAL-QYHNNTAFSTKDKDNDNCLD-KCAQLRKGGYWY-----NCCTDS-----NLNGVYYRLGEHNKHLDGITWYGWHGSTYSLKRVEMKI 339
The following BLAST results are available for this feature:
BLAST of TCONS_00010829 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANGL71.350e-2835.93Angiopoietin-related protein 7 OS=Homo sapiens GN=... [more]
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