TCONS_00010829-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010829-protein
Unique NameTCONS_00010829-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length303

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010829-protein ID=TCONS_00010829-protein|Name=TCONS_00010829-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MKIFACLLLLLSIYMVNGDNTSDIKTLKSSLQLLLKRIELKSSYCFAQAQ
GQCGTCICKDDFNLPKKYYCDCRNQSPQRDCLAHRQNGMKIDGYYTVTMN
GYRTTQVYCDQTTSGGGWTVIQRRMDGSVNFYRTWEQYKIGFGQLHHEFW
QGNEEIHVLCAQALYPKGSEAMIQIKVQGLDYLFTNQYSHFEVGSERSNY
LLQVSGPSGHWHPEYFTRYQNKVEFSTWDKDNDGATSYKCAYTHQFSGWW
INGSKNSCTNDEAASHNLNGPYDKYRTKNWYNRITFFSQNQPWFSEIKVR
RKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006072XLOC_006072Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010829TCONS_00010829Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014715Fibrinogen_a/b/g_C_2
IPR014716Fibrinogen_a/b/g_C_1
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 76..302
e-value: 1.0E-37
score: 141.3
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 78..300
e-value: 3.9E-41
score: 141.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 72..303
score: 39.912
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 72..300
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 226..298
e-value: 6.7E-10
score: 38.5
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 16..225
e-value: 9.8E-47
score: 158.9

Blast
[Close]
BLAST of TCONS_00010829-protein vs. Swiss-Prot (Human)
Match: TENR (Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 1.659e-30
Identity = 74/211 (35.07%), Postives = 106/211 (50.24%), Query Frame = 0 
Query:   77 PQRDCLAHRQNGMKIDGYYTVTMNG--YRTTQVYCDQTTSGGGWTVIQRRMDGSVNFYRTWEQYKIGFGQLHHEFWQGNEEIHVLCAQALYPKGSEAMIQIKVQGLDYLFTNQYSHFEVGSERSNYLLQVSGPSGHWHPEYFTRYQNKVEFSTWDKDNDGATSYKCAYTHQFSGWWINGSKNSCTNDEAASHNLNGPYDKYRTK---NWYN 282
            PQ DC  H  NG  + G Y + +NG   +  QVYCD TT GGGW V QRR +G  +F+R W  Y++GFG +  EFW G + IH + +Q  Y    E  + ++  G +  F + Y  F V   R+ Y L++   +G         Y     FST D+DND A +  CA +++ + W+ N  +           NLNG Y + R     NWY+
Sbjct: 1135 PQ-DCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRITSQGRY----ELRVDMR-DGQEAAFAS-YDRFSVEDSRNLYKLRIGSYNGTAGDSL--SYHQGRPFSTEDRDNDVAVT-NCAMSYKGAWWYKNCHRT----------NLNGKYGESRHSQGINWYH 1325
The following BLAST results are available for this feature:
BLAST of TCONS_00010829-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TENR1.659e-3035.07Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3[more]
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