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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010809 ID=TCONS_00010809|Name=TCONS_00010809|organism=Clytia hemisphaerica|type=transcript|length=997bp CAATCATGGTATGACAAATGTATGGGCATGTATTCCAACCATCAACTAAA AGAATTCATTTTCCATGGATACATATTGATGCATAATTATCTCATGTCTA GCTTCGGACACCAGAAGAAACAGACTGTCAGCAAAGTCCATATGTGGGAA ATGCTATTAAAAATCTTAAATGTGTCCGTCAAAATCAAGGAATTCCAAAA AGCAACAACCCTCTTAGAAAAAGCACTACTCTACAAACCATACAGTGAAA GTCGGAAGTATCGATTAGACTTGGATTACCTGTTAACAACTACTTATTTT CTGGCTGGCGATTATTCGAAAGCGTTCGATATGTTCCGCGTGATCATGAT GCACGAGCGAAACGAGAATATTAATAAAAACTCTATTTGGAACTTATTCA CGCAAATTGTTAATAAAATGCTGGACAAAAGACATCATCGGTTTTCGCTT CGTTTACTTTTCAAAAGACCGAATCATGTTCCGTTGATTATACAAAACGG AATTAACTCACATTTATCTGGAACTTATAAATATGCTATTGgtGAATTTT CAAGAGCTTTTCGCGAATGGCCAACATATCCTTTGACCAGTCTATTACTT GGAACAGCTTTCATACATCTTTCCTGTCAAAAGTTCCATAAGACACGTCA CACCAGTATTTTACATGGTTTGATCTTCACATTTCAATACTTCCATTTAC GCGGTGGAAATCAAGAAGCGTGTTACAACTTAGCAAGAGCTTTCCATTCA GCAGGGCTGATACATTTCGCGACACATTATTACAACAAAGCTTTGGATTT CCCTTTACATGACGAAAAGAAGAATGAGTACAATCCATTTATCGATCTTC ATCGAGAGGCTGCGTACAATTTATCGAACATTTATCGAAACAGCGGAAAT AGAGACTTAGCTAGGAATGTTCTATACAAATATTGTtggatttaaagatt ttttcgatTGGATGCatgatactctcgggtaccgaAAAGGCGGGGgg Run BLAST on NCBI protein sequence of TCONS_00010809-protein >TCONS_00010809-protein ID=TCONS_00010809-protein|Name=TCONS_00010809-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
QSWYDKCMGMYSNHQLKEFIFHGYILMHNYLMSSFGHQKKQTVSKVHMWE MLLKILNVSVKIKEFQKATTLLEKALLYKPYSESRKYRLDLDYLLTTTYF LAGDYSKAFDMFRVIMMHERNENINKNSIWNLFTQIVNKMLDKRHHRFSL RLLFKRPNHVPLIIQNGINSHLSGTYKYAIGEFSRAFREWPTYPLTSLLL GTAFIHLSCQKFHKTRHTSILHGLIFTFQYFHLRGGNQEACYNLARAFHS AGLIHFATHYYNKALDFPLHDEKKNEYNPFIDLHREAAYNLSNIYRNSGN RDLARNVLYKYCWI Run BLAST on NCBI transcript from alignment at sc0000117:14235..25396- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010809 ID=TCONS_00010809|Name=TCONS_00010809|organism=Clytia hemisphaerica|type=transcript|length=11162bp|location=Sequence derived from alignment at sc0000117:14235..25396- (Clytia hemisphaerica) CAATCATGGTATGACAAATGTATGGGCATGTATTCCAACCATCAACTAAA
AGAATTCATTTTCCATGGATACATATTGATGCATAATTATCTCATGTCTA
GCTTCGGTAAGTTTTACCATAAAATAATTTTAGGGAATTATGATATCGGA
TTTCAAAAGCAGAGTCATCGTAAAGATGACCTGGAGCAGAATGGGGAGGG
AAACTTTGAAGATTCTACCATTGGGTCCCCCCCCCCCTGGGGCTTAAACA
AAAGGATTGCAAAATTGATTATTAAAAATGAATCTTCCCAAGTAGATAAC
TCGAAACCAATGAACAAAGCTTACTGATATGTTTATGATATGCTTATTTT
TCACCAAGCCAATGCCTCAGTATGCTTATAAACGTCATGCTTATATAAAA
ACCTGTACTTTCCTTATTTTTCTAGGACACCAGAAGAAACAGACTGTCAG
CAAAGTCCATATGTGGGAAATGCTATTAAAAGTAAGTCTTATTTTGCTTT
TACGTCCAACTCGGATTTTTTCTGTGGTTTGTGTAGTTGCAAAGTCGAGC
TACTCGAATTTTCTCAAAGGTATTTAGTCTAATTAGACGAAATTAGACGA
CTAATTCAGACATAGTAGAAATAAAGCAAAAAGCAATGGAGGGAACAATT
TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTAATTTTAAGAACATTGATGTATGCTTATTAATAGTGATTCTTATA
AATAAATATGCGTTTTTTGAGCTGAAAAATTCTTTTTTTACAAAATTCTG
CTTGAGCAATCTTTTACCTACTTTCATGCAAAAAGTCAGAAAATAACAAG
TCCAAAAAACCCTTTTTTTAGCCGTTTTTTTAGCTGAAATTTACCCCAAA
ATTCTTTTTCCAAAAATCAAGCTCCGCCACATTCGAGGGTTTATAGTTAT
GCATCTTTGTGCAAAAAATCATAAAGAATAAAAGAGCCAATCTCGAGAAA
AGCTAATACCTAAGTAATTGATAGTGTGCTTATAAAGAAATATAGAGTTT
GGCCAGTTTTTCTATAAAAACAAGCCAAGCAACCAAAATTTCATATCTAA
ACACATATTCTTTAAAAGTAAGCCCTAATGAGCAAAAAAACATCTCCAAA
AAATTGAGTAATTTGGCTGAGAACATTGATGTATGATTATTAATAGTGAT
TCTTATTATAGATAAACATGCGTTTTTTTAGCCAACAAAATTCTTTTGCA
AAAATCTGCTTGAACCATCTTTCACCTATGATGATACCTTACTTTCCTTC
AAAAAATCAGAAAAAATTAATGATCCAATTTTTCACAAAGTCCAAAAAAC
ACAATTTTTAGCCGTTTTTTGGCCCCAATTTGCCCAAAAAAGTTTTTTTT
TGAAAATCGGGCTCCGTCACATTCGAGGGCTTATAGTTATGCATCTTTGT
GCAAAAATTCGTAAAGAATAAAAGAGCCAATCTCGAGAAAAGCTAATACC
TAAGTAATTGATAATGTGCTTATAAAAAAATATCGAATTTGGCCAGTTTT
TCTATAAAAACACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CTGAGCAAAAAAAACATCTATCTCATAAAAAAATTGAGTAATTTGACTAA
GAACATTGATGTATGCTTATTAATAGTGATTCTTATAGATAAACATGCTT
TTTTTTAGCCAACAAAATTTTTTTGCAAAAATCTGCTTAAGCCATCTTTT
ACCTACGATGGTATCCTACTTTCATGCAAAAAAACAGAAAAAATTAACGA
CCTAATTTTTCACAAAGTTCAAAAAACCCGTTTTTTAGCCGTTTTTTGGC
CATAATTTTCCCAAAAAATATTTTTTTTGAAAATCGGGCTCCGTCACATT
CGAGGGTTTATAGTTATGCATCTTTGTGCAAAAAATCAGAAAAAACTAAC
GAGCCAATCATGAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTGTAAAGAATACAGTGGGTACAGAAGCA
TTCCAAAACCAAAATGATTCAAAATACAACCAAACAACAGGAACATAACA
TGAAATATCCTTCAGGAATTTCTCCAATAAAAGGAGTGTTAATGTCAAGT
TTGTGTACCATCAACTGCTCTAAAATGGGATTTCTTGAGATAATATGGGA
CATACTTGCTTTCTGGTTAGATTTTTCTCTCTATCGTCATATCCTCTTCA
ACAACAAACAGATTTCCATGTTTCTTGGACAGTACAAAAACGATGATTCT
GTGGAGGTTCGGTTAAAATGGTTGCTGTTTTGGTGTCCCATTGCACAAAC
ATTGCACAGCTCCATTAAAAACCCAGACAATAGACGATATCGGCTTAACT
TGAAAACTCAGATTTGATCCCTGAATATTGTCCACAATGCTTTGTGCGGA
AAAAATTTCACCGTGAACTTTTTCCGTGAAAAGCATTGTGGGCAATATTC
GGGGATCAATTCTTGTTCAACATTTTGAAGTCAAAACTCTCTTGTCATTA
AAATGTTATATTAAAATGAAGTTTGATGATTGGTTGAACAACTGCTATCA
GCGATTCAGANGAGGGAATGTAAAGTTTCCCTCAAATGATGCAAATTACC
CTTTTTCACGGGTACCAATCTAATCTAACATTATCAAACGATAGGTGTTA
GATTACCGCAACCAAATTCGAACAGTCACAAGCCAAACTAAAAGATTCTG
GTAAAGTTGAATTATGTTCGACAGATCGAACGACCCTGCCGATTCCCTGG
ACTCCAGGGATATTCTTGTTGCGTGTCCGAGGATTTTAACATTACTTTTT
GAGACTTACCCCGGACTGAACGCATGGTCTGCGAGACGTACTTAAAAAAT
TGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCCGCTTTCATGCAAACTTAGTCGACCGTGCG
TTAACTCGTGACAACACGTTCACTTATCCAGCCGCGTGGTTCACTTATCT
GGCAGCGCAATTTGTTTGTCTGTGGATAGAAATATTTCTTTCGTTCGACA
GGGTCGTCTTTGATCAGGTTCAGTAACCAAACACCTATAATAGTTTGATT
CTGTTTGATAAAATTTGATAGTTCTATTGCGAAAATTTGGATCAATTGAA
TTCAATTGACATCGTCTGGAGATANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
AGATGACGCGTTCTTTAGAAAAAGTAATAAGATTCTTTTATTACATCTTA
ACGACCAACTAAATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCCTA
AACTCGAGATTAACCTTACTTTTCTGAATAATACATACCTTAAAGGAAGA
AATTTTCGCGGGAAGAAATTTTTGTGGAATCTAATTTCGCGGCTCACAGC
TCGAAATTCGGAAGTTTCGCGGAATTTAATTTCGCGGTTGAGAGAGAATT
TTTTGCCCTAAAAAGACCAATTTTAGAGGTAATCTTTTAAATTCTGAAAA
TATTTGTCTTTCGCGGAATAAATTTTGCGGATTTATTAAAAGAAACCGCG
AAATTTAATTCCGCGAAAGTTTGTTCTTGTTCCCGTTTTGTTTTCTTTAT
CTAACATATCCTTTAAATTACATTTCCAGATCTTAAATGTGTCCGTCAAA
ATCAAGGAATTCCAAAAAGCAACAACCCTCTTAGAAAAAGCACTACTCTA
CAAACCATACAGTGAAAGTCGGAAGTATCGATTAGACTTGGATTACCTGT
TAACAACTACTTATTTTCTGGCTGGCGATTATTCGAAAGCGTTCGATATG
TTCCGCGTGATCATGATGCACGAGCGAAACGAGAATATTAATAAAAACTC
TATTTGGAACTTATTCACGCAAATTGTTAATAAAATGCTGGACAAAAGAC
ATCATCGGTTTTCGCTTCGTTTACTTTTCAAAAGACCGAATCATGTTCCG
TTGATTATACAAAACGGAATTAACTCACATTTATCTGGAACTTATAAATA
TGCTATTGGTAAGGAGCTTAAAGCAAATTATCTTGATTTATTTGTATATA
TTTTTGTTTTGGCGATATGTTATTCTGGTATTGAAAATAGCTGTCAAAGT
ACCATTGTGTACAGTAAAACCTCTAATTAACGGACACTCTAAAAGGCGGA
CACCTCTGATTAGCGGACAATTTCATTTTCCCCGGCCGTTTCCTAGTCAA
ATCCTCATAAAAAAGTTTCTAAAAGGCGGACATCTCTGATTAGCGGACAA
TTTCATTTTCCCCGGCCGTTTCCTAGTCAAATCCTCATAAAAAAGTTTCT
AAAAGGCGGACACTCAATTAGCAGACCCTCTGATTAGCAGACAAATTTTT
TCGCACGAAATGGCTAAAACCCCTATTTTAGCTCTCCAATTAGCGGACAT
TGAATATCAAACGGGTCACAGACGTCCAAAATCGAAAAAATTTTTTTTAG
ATATTTTTATTTCAAGCACTTAGGCGAGACCAATTTAATTTGTTGTTCTA
CGGGAAGAAAACTGTGGATCGGTCGGCCGCTGTAACAAAAACAAATTCCT
TAAAATCTGGAGTCGGAAGATAAAGATAAAAATTTTGTGACGTTTTGAAG
CAGTAGACTTTTTCCCTTTCATCAATGAGTGACTTTTGTGTCGTTTCCAT
TGTGATATTCTAAATTCATCTAAGTTCTTGAATGAATTTAAAATTTTCAA
CTTGTTCAGTCAGAAGTATCTAGCAAAAAACTTATAAAGTCCATCGTCCA
GCTTTTCAAATTCAATATTATTATTTTTTCAATTTTGGAAAAAACAGGGT
CGGTCGGGCCCGTAGAACGACAAATTAAATTGGTCTCGCCTTATTAGTCT
TATTATTCAAATTATTTCTACAAATTTCCAGTTTTCCCTTGACCCATTCA
ACGAATTTAGGTGGGCCAAAGAAATCATAAATCACTGGTACTTCAAGTCC
GTACCCACCACCTCGATTTAACCTTTCTTTTGTTCTTCTATGGCCTAGTG
TCTGCAAATAAGTACTTTAGACCCCAATTTTGTATTTTCGACACCCTGAG
ATGGCCTTATTTCAAAATTGGAGCTCCGAGATTAAAAGTTTCTAAAAGGC
GGATACTTCTAATTAGCGGACACTAACCCCTTTCCCCGATGGTGCCCGGT
AAAATTCTGGTAAAATTCATAAAAATACATCAAATATGGGTTTCGAGGTA
GATCCAGCCTTACATAAACTTTATCCAGTCTAGAACAAAAAACCTGAGGA
AAATTTCGGTAAAATTAAATTGATTTTGATGAAGATTTTAAACCCTTTCG
ACCCTTCAGTTTCAAAATTTACGTGTTTAGTTACTGAAAAATGTTCTTAA
TGTTCAAAGGCTATTGCAATTGCAAAATTTAAAATTGCCAATTTTAACGT
TTTTGAGCACTTTCCGAAAGTAACTTCTTTATTCAATTGAGCATAACTTT
TGATCTAATGAATCGAATTTAATAAGTGACCCATCAAAATTTAAGTCTAT
CTTTCTTCTTTCCAATGAAATAGGAATGGTTCTTTTAAAATTTTTTAGAT
TTCGAGAAAATTAGTTTTAAAGAGAGAAACTTGTGGTGCACCCGGTAGCT
AGAACACTGCGCCAGCCCCTTGACCATTGTGGGCTAAAATGCGAAGCAGG
CGCTGCTACCTGATTTTAGCCAGGGGGCTAGATCCTCATTAACCTAGCTT
AAGCTGTATCGATTTTTTGAAAATGTAGGACGTAGAGAGTAAATTTGCTG
TTTAAATTTTACCCGTACAAAAAGGTTACATGTTTTTTCATATATGCAAG
CTTGTGCCCCCCTCCTTTTGATAAATTGTAGGGGTCACCTGAAACACTTT
TCAGCCAAGCAACGCCTCGAGCCTAGAGGCAGCCTAAATTCCAAGAGGGT
AGTTAAACATGTGTCTAAGTCAATTTTTCTTCTATGTTTATCTTTTTTTA
GGTGAATTTTCAAGAGCTTTTCGCGAATGGCCAACATATCCTTTGACCAG
TCTATTACTTGGAACAGCTTTCATACATCTTTCCTGTCAAAAGTTCCATA
AGACACGTCACACCAGTATTTTACATGTAAGTTTGGCTAGTCTTTGGGTT
CATCTATCTGATATTTTCATTGAGAACTACTATGTACTTATACGAAGGGC
TTGTCCCTTCGTCCAATTATATTCACTCAGGGGAGTTTGTTAACCGTGAG
TACCAACTTTCTCTGAAATTTAACCTGTGTGTTACAGTAATTACCCACTC
ATTAATAAGTTTTCAATTCTCTAACAAGTAACTTTAATGGATTCCTTCCT
AATTTTATAAAAATGTGGATGTTATTCTGAGATTACACTCTTTCATAGAA
TCTTCTACGTTTCTTACTTGTGATTAGATTTGACCGGCCTTCATCCAAGA
TCCTGAATGATTGCCATAGTAACCTTTGTACGCGTTAAATAAAGTAGTAC
GGTAGACTTTTTCGGCAGAACAGAGTATGCATATTATATTCCTTATTGAG
ACGAGTGGACCCAATGTTCAGTCGAACCCAAAATCATAAAATAAAAACTG
AGAGAAATAGTTGACAGAAGGAGTATATATTATCGATTCCATCATCTTTA
ATTTAGGGTTTGATCTTCACATTTCAATACTTCCATTTACGCGGTGGAAA
TCAAGAAGCGTGTTACAACTTAGCAAGAGCTTTCCATTCAGCAGGTATGC
TACTCTTCTCAGGCTACGTCATATCTTCCTTCGTTTCGAGCGTAAAACTT
CTTCTCTTCGGGGATATGCGCACTGAGGTTTTAATGAAACAATAGAGTGT
TTCGAAACCTAAGCCAATCAGATGTGTTTTAAACATTCTTTTATCGACCG
CCGGAGGCGGTTTCTTTCATAGTGGTACGCTAATCTCGTTTTGCCTTGGC
TCATTACTTTGTCTACCATTTACTTTCGGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTTCAATGAA
TAATCTAAAATGTACTGGAGATGACATGTAGGCGTTAATAATGTGCGCGC
ACTCTTTCGCGAGCGTGATGCGTGATGGAAGGCGGTTGTTTCAGTGTGGT
TTAGATCCACGCTGTGACCTAGTTTGAAATCTTTATTGATAAACATCTTT
TGTGAAAGTTGTCTATTGTGTTTAAACCTATTAATAAGCCATCCCCGGTG
GTTTTTAGTGGCCGCCTATAGCAGTGCTATAGACCAAGAGTAAGGCCTAA
AAGCCTGGAGCTTTCTATTGTGTAAACTAACTCTTCTGTACTATAGATAT
TTTCAAGCTTTAGGTCTAGTCTAGTAACCTAGCCTAATGTCTCGCTCACA
AAATTAAAGGAGTGTCTTTCATGGGCTAGTTGCCGAGATTGCATGTTAAA
CGACTTATTATACAAACTGATACTATCCCGTAACAGTTATCATACTATCA
TATAACACCCATATCATTGTATTAGACGGACTATAAACGACTCCAGACTA
CGGGGTTAAGTATCGATAGACTTTTCGCAAAGACAAACGGATTTCATACA
AATTTCACAAGCACTTTTTGTCCCTTTCTTTAATTTGTTATTAACAATTT
AGGGGTCTCCATCTAATTAAGGGGACATCCATATAGTACGTATGTAGGAT
AGGAGGTTGGGCAAAAGCGTATGTCTATTGTTTGAATGAAGGCATTTGTA
TTGTTCTCATNATAGTACGTATGTAGGATAGGAGGTTGGGCAAAAGCGTA
CGTCTATTGTTTGAATGAAGTCATTTGTATTGTTCTCAGCGTACAAGGAT
GAGGGGTGGCAAAAATCTGGAAAATTTTTGAGTATTGGGGTTTCCAGAAA
AAAATTGAATATGGGGCGTTGGAGGATATAACATTTTTTGGAAATTTATC
CCGGACATTTTGACTTTTGACCCTCCGGACAGCAGGTCTTACCCCCCGGA
CAACATCAGTTGATCCCATTGACAGGTTTACCCTCGGACAAGGCAAATTT
TGTAGATTTTTCACTACCCCCGGACACTTTATCCCCCCCCTCCATGGACG
GACATTTTCTGGAAGAGCCCATTACTATGTGGATGACCCCGAACGCTAAT
TTACTTTTTTTTCGTTTCAGGGCTGATACATTTCGCGACACATTATTACA
ACAAAGCTTTGGATTTCCCTTTACATGACGAAAAGAAGAATGAGGTACGA
ACGAACGAGGTCTCTTACCCGGGGGGGGGGGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTTACAGTTAACTTTC
TTGACAAGCTTTTTTTCTTTTTTGAACCAGACGTTACGGTTCCGTATTGT
TCTGAAACGTAACAAGTGTGAATGTCAAAATTCGAAACGTCAAAAGAGAA
GACGTTTCAAAGCAAAACAGATTAACAGTTACGCTCCACTATTTTCATCG
GAACGGAATTGATCCGTTCTTATGCTCCAAAACGTTCCGAAACCAATACG
AACACTATCGGCCTGTATAAAAAGTGACAGATATAACTTCGTAAAAATAT
GTACTTTAGACGTTCAAACTTTCGCGAGCAGAAACTTTCGCGAGGTCGAA
AATTCGTGAAATCTACGACATTTACTTTAGCAAATTTGAGGAAGAAAATT
TTTTTCGAGCACAAACTTACTCGAATCGTTGGATAAAATTAGAATTCTCG
ATAAATCCGATAAAGACAGTTGCTCTTCGACTTAAAAAAGGCATTAAAAG
ATAAAAATATGCGGACAATTTTATATTTATTACGAGTACGAGGTTTTATA
GATTTCCAATTTTTTTGAGAATTTTTCGCGAGCAAAATTCACGAAAATTG
CGAAAGTTTCTGCTCGCAAAAATGTGTACGCCTAAAGTAGTGGATCTCGA
TGTATCCAGACACAAAATTAAAAATATTAGAAATTCTCGAACACCCCTTG
TTGATTATAACGATTCAAGTCTTCTGTTTCTCCCTTCTTTCAGTACAATC
CATTTATCGATCTTCATCGAGAGGCTGCGTACAATTTATCGAACATTTAT
CGAAACAGCGGAAATAGAGACTTAGCTAGGAATGTTCTATACAAATATTG
TTGGATTTAAAGATTTTTTCGATTGGATGCATGATACTCTCGGGTACCGA
AAAGGCGGGGGG Coding sequence (CDS) from alignment at sc0000117:14235..25396- >TCONS_00010809 ID=TCONS_00010809|Name=TCONS_00010809|organism=Clytia hemisphaerica|type=CDS|length=6615bp|location=Sequence derived from alignment at sc0000117:14235..25396- (Clytia hemisphaerica) TACAATCCATTTATCGATCTTCATCGAGAGGCTGCGTACAATTTATCGAA CATTTATCGAAACAGCGGAAATAGAGACTTAGCTAGGAATGTTCTATACA AATATTGTTGGATTTAAGGCTGATACATTTCGCGACACATTATTACAACA AAGCTTTGGATTTCCCTTTACATGACGAAAAGAAGAATGAGGGTTTGATC TTCACATTTCAATACTTCCATTTACGCGGTGGAAATCAAGAAGCGTGTTA CAACTTAGCAAGAGCTTTCCATTCAGCAGGTGAATTTTCAAGAGCTTTTC GCGAATGGCCAACATATCCTTTGACCAGTCTATTACTTGGAACAGCTTTC ATACATCTTTCCTGTCAAAAGTTCCATAAGACACGTCACACCAGTATTTT ACATATCTTAAATGTGTCCGTCAAAATCAAGGAATTCCAAAAAGCAACAA CCCTCTTAGAAAAAGCACTACTCTACAAACCATACAGTGAAAGTCGGAAG TATCGATTAGACTTGGATTACCTGTTAACAACTACTTATTTTCTGGCTGG CGATTATTCGAAAGCGTTCGATATGTTCCGCGTGATCATGATGCACGAGC GAAACGAGAATATTAATAAAAACTCTATTTGGAACTTATTCACGCAAATT GTTAATAAAATGCTGGACAAAAGACATCATCGGTTTTCGCTTCGTTTACT TTTCAAAAGACCGAATCATGTTCCGTTGATTATACAAAACGGAATTAACT CACATTTATCTGGAACTTATAAATATGCTATTGGACACCAGAAGAAACAG ACTGTCAGCAAAGTCCATATGTGGGAAATGCTATTAAAACAATCATGGTA TGACAAATGTATGGGCATGTATTCCAACCATCAACTAAAAGAATTCATTT TCCATGGATACATATTGATGCATAATTATCTCATGTCTAGCTTCGTACAA TCCATTTATCGATCTTCATCGAGAGGCTGCGTACAATTTATCGAACATTT ATCGAAACAGCGGAAATAGAGACTTAGCTAGGAATGTTCTATACAAATAT TGTTGGATTTAAGGCTGATACATTTCGCGACACATTATTACAACAAAGCT TTGGATTTCCCTTTACATGACGAAAAGAAGAATGAGGGTTTGATCTTCAC ATTTCAATACTTCCATTTACGCGGTGGAAATCAAGAAGCGTGTTACAACT TAGCAAGAGCTTTCCATTCAGCAGGTGAATTTTCAAGAGCTTTTCGCGAA TGGCCAACATATCCTTTGACCAGTCTATTACTTGGAACAGCTTTCATACA TCTTTCCTGTCAAAAGTTCCATAAGACACGTCACACCAGTATTTTACATA TCTTAAATGTGTCCGTCAAAATCAAGGAATTCCAAAAAGCAACAACCCTC TTAGAAAAAGCACTACTCTACAAACCATACAGTGAAAGTCGGAAGTATCG ATTAGACTTGGATTACCTGTTAACAACTACTTATTTTCTGGCTGGCGATT ATTCGAAAGCGTTCGATATGTTCCGCGTGATCATGATGCACGAGCGAAAC GAGAATATTAATAAAAACTCTATTTGGAACTTATTCACGCAAATTGTTAA TAAAATGCTGGACAAAAGACATCATCGGTTTTCGCTTCGTTTACTTTTCA AAAGACCGAATCATGTTCCGTTGATTATACAAAACGGAATTAACTCACAT TTATCTGGAACTTATAAATATGCTATTGGACACCAGAAGAAACAGACTGT CAGCAAAGTCCATATGTGGGAAATGCTATTAAAACAATCATGGTATGACA AATGTATGGGCATGTATTCCAACCATCAACTAAAAGAATTCATTTTCCAT GGATACATATTGATGCATAATTATCTCATGTCTAGCTTCGTACAATCCAT TTATCGATCTTCATCGAGAGGCTGCGTACAATTTATCGAACATTTATCGA AACAGCGGAAATAGAGACTTAGCTAGGAATGTTCTATACAAATATTGTTG GATTTAAGGCTGATACATTTCGCGACACATTATTACAACAAAGCTTTGGA TTTCCCTTTACATGACGAAAAGAAGAATGAGGGTTTGATCTTCACATTTC AATACTTCCATTTACGCGGTGGAAATCAAGAAGCGTGTTACAACTTAGCA AGAGCTTTCCATTCAGCAGGTGAATTTTCAAGAGCTTTTCGCGAATGGCC AACATATCCTTTGACCAGTCTATTACTTGGAACAGCTTTCATACATCTTT CCTGTCAAAAGTTCCATAAGACACGTCACACCAGTATTTTACATATCTTA AATGTGTCCGTCAAAATCAAGGAATTCCAAAAAGCAACAACCCTCTTAGA AAAAGCACTACTCTACAAACCATACAGTGAAAGTCGGAAGTATCGATTAG ACTTGGATTACCTGTTAACAACTACTTATTTTCTGGCTGGCGATTATTCG AAAGCGTTCGATATGTTCCGCGTGATCATGATGCACGAGCGAAACGAGAA TATTAATAAAAACTCTATTTGGAACTTATTCACGCAAATTGTTAATAAAA TGCTGGACAAAAGACATCATCGGTTTTCGCTTCGTTTACTTTTCAAAAGA CCGAATCATGTTCCGTTGATTATACAAAACGGAATTAACTCACATTTATC TGGAACTTATAAATATGCTATTGGACACCAGAAGAAACAGACTGTCAGCA AAGTCCATATGTGGGAAATGCTATTAAAACAATCATGGTATGACAAATGT ATGGGCATGTATTCCAACCATCAACTAAAAGAATTCATTTTCCATGGATA CATATTGATGCATAATTATCTCATGTCTAGCTTCGTACAATCCATTTATC GATCTTCATCGAGAGGCTGCGTACAATTTATCGAACATTTATCGAAACAG CGGAAATAGAGACTTAGCTAGGAATGTTCTATACAAATATTGTTGGATTT AAGGCTGATACATTTCGCGACACATTATTACAACAAAGCTTTGGATTTCC CTTTACATGACGAAAAGAAGAATGAGGGTTTGATCTTCACATTTCAATAC TTCCATTTACGCGGTGGAAATCAAGAAGCGTGTTACAACTTAGCAAGAGC TTTCCATTCAGCAGGTGAATTTTCAAGAGCTTTTCGCGAATGGCCAACAT ATCCTTTGACCAGTCTATTACTTGGAACAGCTTTCATACATCTTTCCTGT CAAAAGTTCCATAAGACACGTCACACCAGTATTTTACATATCTTAAATGT GTCCGTCAAAATCAAGGAATTCCAAAAAGCAACAACCCTCTTAGAAAAAG CACTACTCTACAAACCATACAGTGAAAGTCGGAAGTATCGATTAGACTTG GATTACCTGTTAACAACTACTTATTTTCTGGCTGGCGATTATTCGAAAGC GTTCGATATGTTCCGCGTGATCATGATGCACGAGCGAAACGAGAATATTA ATAAAAACTCTATTTGGAACTTATTCACGCAAATTGTTAATAAAATGCTG GACAAAAGACATCATCGGTTTTCGCTTCGTTTACTTTTCAAAAGACCGAA TCATGTTCCGTTGATTATACAAAACGGAATTAACTCACATTTATCTGGAA CTTATAAATATGCTATTGGACACCAGAAGAAACAGACTGTCAGCAAAGTC CATATGTGGGAAATGCTATTAAAACAATCATGGTATGACAAATGTATGGG CATGTATTCCAACCATCAACTAAAAGAATTCATTTTCCATGGATACATAT TGATGCATAATTATCTCATGTCTAGCTTCGTACAATCCATTTATCGATCT TCATCGAGAGGCTGCGTACAATTTATCGAACATTTATCGAAACAGCGGAA ATAGAGACTTAGCTAGGAATGTTCTATACAAATATTGTTGGATTTAAGGC TGATACATTTCGCGACACATTATTACAACAAAGCTTTGGATTTCCCTTTA CATGACGAAAAGAAGAATGAGGGTTTGATCTTCACATTTCAATACTTCCA TTTACGCGGTGGAAATCAAGAAGCGTGTTACAACTTAGCAAGAGCTTTCC ATTCAGCAGGTGAATTTTCAAGAGCTTTTCGCGAATGGCCAACATATCCT TTGACCAGTCTATTACTTGGAACAGCTTTCATACATCTTTCCTGTCAAAA GTTCCATAAGACACGTCACACCAGTATTTTACATATCTTAAATGTGTCCG TCAAAATCAAGGAATTCCAAAAAGCAACAACCCTCTTAGAAAAAGCACTA CTCTACAAACCATACAGTGAAAGTCGGAAGTATCGATTAGACTTGGATTA CCTGTTAACAACTACTTATTTTCTGGCTGGCGATTATTCGAAAGCGTTCG ATATGTTCCGCGTGATCATGATGCACGAGCGAAACGAGAATATTAATAAA AACTCTATTTGGAACTTATTCACGCAAATTGTTAATAAAATGCTGGACAA AAGACATCATCGGTTTTCGCTTCGTTTACTTTTCAAAAGACCGAATCATG TTCCGTTGATTATACAAAACGGAATTAACTCACATTTATCTGGAACTTAT AAATATGCTATTGGACACCAGAAGAAACAGACTGTCAGCAAAGTCCATAT GTGGGAAATGCTATTAAAACAATCATGGTATGACAAATGTATGGGCATGT ATTCCAACCATCAACTAAAAGAATTCATTTTCCATGGATACATATTGATG CATAATTATCTCATGTCTAGCTTCGTACAATCCATTTATCGATCTTCATC GAGAGGCTGCGTACAATTTATCGAACATTTATCGAAACAGCGGAAATAGA GACTTAGCTAGGAATGTTCTATACAAATATTGTTGGATTTAAGGCTGATA CATTTCGCGACACATTATTACAACAAAGCTTTGGATTTCCCTTTACATGA CGAAAAGAAGAATGAGGGTTTGATCTTCACATTTCAATACTTCCATTTAC GCGGTGGAAATCAAGAAGCGTGTTACAACTTAGCAAGAGCTTTCCATTCA GCAGGTGAATTTTCAAGAGCTTTTCGCGAATGGCCAACATATCCTTTGAC CAGTCTATTACTTGGAACAGCTTTCATACATCTTTCCTGTCAAAAGTTCC ATAAGACACGTCACACCAGTATTTTACATATCTTAAATGTGTCCGTCAAA ATCAAGGAATTCCAAAAAGCAACAACCCTCTTAGAAAAAGCACTACTCTA CAAACCATACAGTGAAAGTCGGAAGTATCGATTAGACTTGGATTACCTGT TAACAACTACTTATTTTCTGGCTGGCGATTATTCGAAAGCGTTCGATATG TTCCGCGTGATCATGATGCACGAGCGAAACGAGAATATTAATAAAAACTC TATTTGGAACTTATTCACGCAAATTGTTAATAAAATGCTGGACAAAAGAC ATCATCGGTTTTCGCTTCGTTTACTTTTCAAAAGACCGAATCATGTTCCG TTGATTATACAAAACGGAATTAACTCACATTTATCTGGAACTTATAAATA TGCTATTGGACACCAGAAGAAACAGACTGTCAGCAAAGTCCATATGTGGG AAATGCTATTAAAACAATCATGGTATGACAAATGTATGGGCATGTATTCC AACCATCAACTAAAAGAATTCATTTTCCATGGATACATATTGATGCATAA TTATCTCATGTCTAGCTTCGTACAATCCATTTATCGATCTTCATCGAGAG GCTGCGTACAATTTATCGAACATTTATCGAAACAGCGGAAATAGAGACTT AGCTAGGAATGTTCTATACAAATATTGTTGGATTTAAGGCTGATACATTT CGCGACACATTATTACAACAAAGCTTTGGATTTCCCTTTACATGACGAAA AGAAGAATGAGGGTTTGATCTTCACATTTCAATACTTCCATTTACGCGGT GGAAATCAAGAAGCGTGTTACAACTTAGCAAGAGCTTTCCATTCAGCAGG TGAATTTTCAAGAGCTTTTCGCGAATGGCCAACATATCCTTTGACCAGTC TATTACTTGGAACAGCTTTCATACATCTTTCCTGTCAAAAGTTCCATAAG ACACGTCACACCAGTATTTTACATATCTTAAATGTGTCCGTCAAAATCAA GGAATTCCAAAAAGCAACAACCCTCTTAGAAAAAGCACTACTCTACAAAC CATACAGTGAAAGTCGGAAGTATCGATTAGACTTGGATTACCTGTTAACA ACTACTTATTTTCTGGCTGGCGATTATTCGAAAGCGTTCGATATGTTCCG CGTGATCATGATGCACGAGCGAAACGAGAATATTAATAAAAACTCTATTT GGAACTTATTCACGCAAATTGTTAATAAAATGCTGGACAAAAGACATCAT CGGTTTTCGCTTCGTTTACTTTTCAAAAGACCGAATCATGTTCCGTTGAT TATACAAAACGGAATTAACTCACATTTATCTGGAACTTATAAATATGCTA TTGGACACCAGAAGAAACAGACTGTCAGCAAAGTCCATATGTGGGAAATG CTATTAAAACAATCATGGTATGACAAATGTATGGGCATGTATTCCAACCA TCAACTAAAAGAATTCATTTTCCATGGATACATATTGATGCATAATTATC TCATGTCTAGCTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00010809-exon-sc0000117-1575043694:25291..25396 | TCONS_00010809-exon-sc0000117-1575043694:25291..25396 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1575043694:24916..24971 | TCONS_00010809-exon-sc0000117-1575043694:24916..24971 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1575043694:19939..20317 | TCONS_00010809-exon-sc0000117-1575043694:19939..20317 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1575043694:17871..17995 | TCONS_00010809-exon-sc0000117-1575043694:17871..17995 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1575043694:17253..17340 | TCONS_00010809-exon-sc0000117-1575043694:17253..17340 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1575043694:15353..15426 | TCONS_00010809-exon-sc0000117-1575043694:15353..15426 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1575043694:14235..14403 | TCONS_00010809-exon-sc0000117-1575043694:14235..14403 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1510915933:25291..25396 | TCONS_00010809-exon-sc0000117-1510915933:25291..25396 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1510915933:24916..24971 | TCONS_00010809-exon-sc0000117-1510915933:24916..24971 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1510915933:19939..20317 | TCONS_00010809-exon-sc0000117-1510915933:19939..20317 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1510915933:17871..17995 | TCONS_00010809-exon-sc0000117-1510915933:17871..17995 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1510915933:17253..17340 | TCONS_00010809-exon-sc0000117-1510915933:17253..17340 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1510915933:15353..15426 | TCONS_00010809-exon-sc0000117-1510915933:15353..15426 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1510915933:14235..14403 | TCONS_00010809-exon-sc0000117-1510915933:14235..14403 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1491911889:25291..25396 | TCONS_00010809-exon-sc0000117-1491911889:25291..25396 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1491911889:24916..24971 | TCONS_00010809-exon-sc0000117-1491911889:24916..24971 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1491911889:19939..20317 | TCONS_00010809-exon-sc0000117-1491911889:19939..20317 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1491911889:17871..17995 | TCONS_00010809-exon-sc0000117-1491911889:17871..17995 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1491911889:17253..17340 | TCONS_00010809-exon-sc0000117-1491911889:17253..17340 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1491911889:15353..15426 | TCONS_00010809-exon-sc0000117-1491911889:15353..15426 | Clytia hemisphaerica | exon |
TCONS_00010809-exon-sc0000117-1491911889:14235..14403 | TCONS_00010809-exon-sc0000117-1491911889:14235..14403 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000117 | supercontig | sc0000117:14235..25396 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
Term | Definition |
IPR011990 | TPR-like_helical_dom |
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00010809 vs. Swiss-Prot (Human)
Match: TF3C3 (General transcription factor 3C polypeptide 3 OS=Homo sapiens GN=GTF3C3 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.895e-58 Identity = 109/273 (39.93%), Postives = 164/273 (60.07%), Query Frame = 1
Query: 124 TVSKVHMWEMLLKILNVSVKIKEFQKATTLLEKALLYKPYSESRKYRXXXXXXXXXXXFLAGDYSKAFDMFRVIMMHERNENINKNSIWNLFTQIVNKMLDKRHHRFSLRLLFKRPNHVPLIIQNGINSHLSGTYKYAIGEFSRAFREWPTYPLTSLLLGTAFIHLSCQKFHKTRHTSILHGLIFTFQYFHLRGGNQEACYNLARAFHSAGLIHFATHYYNKALDFPLHDEKKNEYNPFIDLHREAAYNLSNIYRNSGNRDLARNVLYKYCWI 942
++K W +LLK + + FQ+A L++ +L Y + + R+ R +L+Y + L ++ KA++ R+++M EN+NK +WN+F Q+ D RHHRF LRL+ K P + L + NG N+ +SG++K+A+G++ +AFR P PL S +G FIH++ QK+ RH I+ G F +Y LRG QE+ YNL R H GLIH A HYY KAL+ P + E + +DL R+ AYNLS IY++SGN +A+ +LY YC I
Sbjct: 619 VLTKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKAYNYIRIMVM----ENVNKPQLWNIFNQVTMHSQDVRHHRFCLRLMLKNPENHALCVLNGHNAFVSGSFKHALGQYVQAFRTHPDEPLYSFCIGLTFIHMASQKYVLRRHALIVQGFSFLNRYLSLRGPCQESFYNLGRGLHQLGLIHLAIHYYQKALELPPLVVEGIELDQ-LDLRRDIAYNLSLIYQSSGNTGMAQTLLYTYCSI 886
The following BLAST results are available for this feature:
|