TCONS_00010809-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010809-protein
Unique NameTCONS_00010809-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length314

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010809-protein ID=TCONS_00010809-protein|Name=TCONS_00010809-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
QSWYDKCMGMYSNHQLKEFIFHGYILMHNYLMSSFGHQKKQTVSKVHMWE
MLLKILNVSVKIKEFQKATTLLEKALLYKPYSESRKYRLDLDYLLTTTYF
LAGDYSKAFDMFRVIMMHERNENINKNSIWNLFTQIVNKMLDKRHHRFSL
RLLFKRPNHVPLIIQNGINSHLSGTYKYAIGEFSRAFREWPTYPLTSLLL
GTAFIHLSCQKFHKTRHTSILHGLIFTFQYFHLRGGNQEACYNLARAFHS
AGLIHFATHYYNKALDFPLHDEKKNEYNPFIDLHREAAYNLSNIYRNSGN
RDLARNVLYKYCWI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006065XLOC_006065Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010809TCONS_00010809Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 49..135
e-value: 0.0036
score: 16.9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 252..312
e-value: 1.0E-4
score: 21.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 136..251
e-value: 0.014
score: 14.9
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 156..270
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 61..115
coord: 233..312

Blast
[Close]
BLAST of TCONS_00010809-protein vs. Swiss-Prot (Human)
Match: TF3C3 (General transcription factor 3C polypeptide 3 OS=Homo sapiens GN=GTF3C3 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.801e-61
Identity = 109/273 (39.93%), Postives = 164/273 (60.07%), Query Frame = 0 
Query:   42 TVSKVHMWEMLLKILNVSVKIKEFQKATTLLEKALLYKPYSESRKYRLDLDYLLTTTYFLAGDYSKAFDMFRVIMMHERNENINKNSIWNLFTQIVNKMLDKRHHRFSLRLLFKRPNHVPLIIQNGINSHLSGTYKYAIGEFSRAFREWPTYPLTSLLLGTAFIHLSCQKFHKTRHTSILHGLIFTFQYFHLRGGNQEACYNLARAFHSAGLIHFATHYYNKALDFPLHDEKKNEYNPFIDLHREAAYNLSNIYRNSGNRDLARNVLYKYCWI 314
             ++K   W +LLK +     +  FQ+A  L++ +L Y  + + R+ R +L+Y   +   L  ++ KA++  R+++M    EN+NK  +WN+F Q+     D RHHRF LRL+ K P +  L + NG N+ +SG++K+A+G++ +AFR  P  PL S  +G  FIH++ QK+   RH  I+ G  F  +Y  LRG  QE+ YNL R  H  GLIH A HYY KAL+ P    +  E +  +DL R+ AYNLS IY++SGN  +A+ +LY YC I
Sbjct:  619 VLTKDDWWNLLLKAIYSLCDLSRFQEAELLVDSSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKAYNYIRIMVM----ENVNKPQLWNIFNQVTMHSQDVRHHRFCLRLMLKNPENHALCVLNGHNAFVSGSFKHALGQYVQAFRTHPDEPLYSFCIGLTFIHMASQKYVLRRHALIVQGFSFLNRYLSLRGPCQESFYNLGRGLHQLGLIHLAIHYYQKALELPPLVVEGIELDQ-LDLRRDIAYNLSLIYQSSGNTGMAQTLLYTYCSI 886
The following BLAST results are available for this feature:
BLAST of TCONS_00010809-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TF3C31.801e-6139.93General transcription factor 3C polypeptide 3 OS=H... [more]
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