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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010794 ID=TCONS_00010794|Name=TCONS_00010794|organism=Clytia hemisphaerica|type=transcript|length=1573bp
aacaaaaactATAATGGCAGAAGCAGTGGTCACAGCGGCTATCGGTGCTA
CGGTGAAAGAAATCATCGGTGCTATAAAGACAAAAAACCCTGTTCGAGAA
AACGTTCTTCAAATTTCTAGTAATTATCACGAAATGTTCAAAGTTCGTGT
GGAAAGTCCAGAGCTATTACTCATCAAGTTAAATAGAGGTGGGAATCTCA
AAGTGCAGTTGGTTCGATCAGATTCGGCCCTTGGCACCGCCCATATGGAA
GGTGTTTTTAACCACCTCAACAGTAAGGGTGGGAAGAAGTTTGCTAGATC
TTACAGATCGGATAAGGGAGGATTTAATACAAGACTCTCAGCGGATGCCC
AAGATGTGTTGGTTATCACACTGGAAGCTCACCACTTTTGCAGTGCGTTG
ATTGGTCAAGGTTCCACCGAAATGGACATCTCAGTTTCATATTGTTAATC
ACCACAAAAACAAACACTTagaagacttttttctttaaaaaattagctct
agtttagacggccgactttctacCTTGCCTTTCCATTGCATGAAATatgt
tgaaagaagacattgcattgacgtcaaaagatggCAATGCATTGTCTTTA
GACACCCAACTTTATgtccactttaattcacaattcgAATATTCATGGCG
AAAAGCGGGCCtcctaaactagagcttaatGATATAAATAATTCTAGTCA
GGTTTTGTACAATGTTGAAAGAAGACACTTTTTTTAANCGAAATGTTCAA
AGTTCGTGTGGAAAGTCCAGAGCTATTACTCATCAAGTTAAATAGAGGTG
GGAATCTCAAAGTGCAGTTGGTTCGATCAGATTCGGCCCTTGGCACCGCC
CATATGGAAGGTGTTTTTAACCACCTCAACAGTAAGGGTGGGAAGAAGTT
TGCTAGATCTTACAGATCGGATAAGGGAGGATTTAATACAAGTCTCTCAG
CGGATGCCCAAGACGTGTTGGTTATCACACTGGAAGCTCACCACTTTTGC
AGTGCGTTGATTGGTCAAGGATCCACCGAAATGGACATCTTAGTGTCATA
TTGTTAATCACCACAAAAGCAAACACTTagaagacttttttctttaaaaa
gttaGCTCTAGTTTGGACGGCCGATTTTCTACCTTGCCTTTCCATTGCAT
GAAATatgttgaaagaagacattgcattgacgtcaaaagatggCAATGCA
TTGTCTTTAGACACCAACTTTATgaccactttaattcacaattcgAATAT
TCATGGCGAAAAGCGGGCCtcctaaactagagcttaatGATATAAATGAT
TCTAGTCAGGTTTTGTACAATGTTGAAAGAAGACACTTTTTTTAATGTGT
TAATTTGTACGTCTGATGATTGCCGTTAGCCATGAAACTTGAAGTAATGT
ACTTTTTTTAACagcgaaattttgaaatttataaatgattctatattttt
aaaatgaaaattcaaaatagaaCTCTTAGCcataatgttgatttttttga
catcatcaaattttcagcaccctcgcgagccagggccgataaacgattct
gcgacttaaagaggccagtaccg Run BLAST on NCBI transcript from alignment at sc0000117:306347..307919+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010794 ID=TCONS_00010794|Name=TCONS_00010794|organism=Clytia hemisphaerica|type=transcript|length=1573bp|location=Sequence derived from alignment at sc0000117:306347..307919+ (Clytia hemisphaerica)
aacaaaaactATAATGGCAGAAGCAGTGGTCACAGCGGCTATCGGTGCTA
CGGTGAAAGAAATCATCGGTGCTATAAAGACAAAAAACCCTGTTCGAGAA
AACGTTCTTCAAATTTCTAGTAATTATCACGAAATGTTCAAAGTTCGTGT
GGAAAGTCCAGAGCTATTACTCATCAAGTTAAATAGAGGTGGGAATCTCA
AAGTGCAGTTGGTTCGATCAGATTCGGCCCTTGGCACCGCCCATATGGAA
GGTGTTTTTAACCACCTCAACAGTAAGGGTGGGAAGAAGTTTGCTAGATC
TTACAGATCGGATAAGGGAGGATTTAATACAAGACTCTCAGCGGATGCCC
AAGATGTGTTGGTTATCACACTGGAAGCTCACCACTTTTGCAGTGCGTTG
ATTGGTCAAGGTTCCACCGAAATGGACATCTCAGTTTCATATTGTTAATC
ACCACAAAAACAAACACTTagaagacttttttctttaaaaaattagctct
agtttagacggccgactttctacCTTGCCTTTCCATTGCATGAAATatgt
tgaaagaagacattgcattgacgtcaaaagatggCAATGCATTGTCTTTA
GACACCCAACTTTATgtccactttaattcacaattcgAATATTCATGGCG
AAAAGCGGGCCtcctaaactagagcttaatGATATAAATAATTCTAGTCA
GGTTTTGTACAATGTTGAAAGAAGACACTTTTTTTAANCGAAATGTTCAA
AGTTCGTGTGGAAAGTCCAGAGCTATTACTCATCAAGTTAAATAGAGGTG
GGAATCTCAAAGTGCAGTTGGTTCGATCAGATTCGGCCCTTGGCACCGCC
CATATGGAAGGTGTTTTTAACCACCTCAACAGTAAGGGTGGGAAGAAGTT
TGCTAGATCTTACAGATCGGATAAGGGAGGATTTAATACAAGTCTCTCAG
CGGATGCCCAAGACGTGTTGGTTATCACACTGGAAGCTCACCACTTTTGC
AGTGCGTTGATTGGTCAAGGATCCACCGAAATGGACATCTTAGTGTCATA
TTGTTAATCACCACAAAAGCAAACACTTagaagacttttttctttaaaaa
gttaGCTCTAGTTTGGACGGCCGATTTTCTACCTTGCCTTTCCATTGCAT
GAAATatgttgaaagaagacattgcattgacgtcaaaagatggCAATGCA
TTGTCTTTAGACACCAACTTTATgaccactttaattcacaattcgAATAT
TCATGGCGAAAAGCGGGCCtcctaaactagagcttaatGATATAAATGAT
TCTAGTCAGGTTTTGTACAATGTTGAAAGAAGACACTTTTTTTAATGTGT
TAATTTGTACGTCTGATGATTGCCGTTAGCCATGAAACTTGAAGTAATGT
ACTTTTTTTAACagcgaaattttgaaatttataaatgattctatattttt
aaaatgaaaattcaaaatagaaCTCTTAGCcataatgttgatttttttga
catcatcaaattttcagcaccctcgcgagccagggccgataaacgattct
gcgacttaaagaggccagtaccg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010794-exon-sc0000117-1491911889:306347..307919 | TCONS_00010794-exon-sc0000117-1491911889:306347..307919 | Clytia hemisphaerica | exon |
| TCONS_00010794-exon-sc0000117-1510915933:306347..307919 | TCONS_00010794-exon-sc0000117-1510915933:306347..307919 | Clytia hemisphaerica | exon |
| TCONS_00010794-exon-sc0000117-1575043694:306347..307919 | TCONS_00010794-exon-sc0000117-1575043694:306347..307919 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117 | supercontig | sc0000117:306347..307919 + |
Blast
The following BLAST results are available for this feature:
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