TCONS_00010765 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010765
Unique NameTCONS_00010765
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length499

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010765 ID=TCONS_00010765|Name=TCONS_00010765|organism=Clytia hemisphaerica|type=transcript|length=499bp
GAACTTATAGCCCTAGATAAAACGAGAACTAAAAATATTAAATCCAAGTT
AAATTTATGAAATTAGGTTGACCCTCTATACCGTCGATAAAATACGTAAA
AAGTCAAAGGTAATTTTTTGAGCGTCCTTAAAATAGTTTCTTTTATCGTA
TCTTTCACTTTAtcttaaaagtgaaaatttaaaaattttagggTGATAAA
TCTCACACccacttttttctatttgataaaattttatgcTAATATAATTC
TATATGCTAATATACAATCCGATGATTTACACTTCAATTTTCTTTGACTC
GTTATATCCGCTCCATacaaaaaataagttttcaaatattaatGCATGAA
CGTACTGGGGGTAGTACTTTTACAGTGTTTTAGTACGGTGTTACTATTTT
AAACCTCTACAAACCGGTGCGACGTTATTATTGAATCCGTACAAACCACC
CCCTACTAAGTTACAATAAAATTAGAATGGATAGGCTACTTTaatggga
Run BLAST on NCBI

transcript from alignment at sc0000109:456685..457183

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010765 ID=TCONS_00010765|Name=TCONS_00010765|organism=Clytia hemisphaerica|type=transcript|length=499bp|location=Sequence derived from alignment at sc0000109:456685..457183 (Clytia hemisphaerica)
tcccattAAAGTAGCCTATCCATTCTAATTTTATTGTAACTTAGTAGGGG
GTGGTTTGTACGGATTCAATAATAACGTCGCACCGGTTTGTAGAGGTTTA
AAATAGTAACACCGTACTAAAACACTGTAAAAGTACTACCCCCAGTACGT
TCATGCattaatatttgaaaacttattttttgtATGGAGCGGATATAACG
AGTCAAAGAAAATTGAAGTGTAAATCATCGGATTGTATATTAGCATATAG
AATTATATTAgcataaaattttatcaaatagaaaaaagtggGTGTGAGAT
TTATCAccctaaaatttttaaattttcacttttaagaTAAAGTGAAAGAT
ACGATAAAAGAAACTATTTTAAGGACGCTCAAAAAATTACCTTTGACTTT
TTACGTATTTTATCGACGGTATAGAGGGTCAACCTAATTTCATAAATTTA
ACTTGGATTTAATATTTTTAGTTCTCGTTTTATCTAGGGCTATAAGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006039XLOC_006039Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010765-exon-sc0000109-1491911889:456685..457183TCONS_00010765-exon-sc0000109-1491911889:456685..457183Clytia hemisphaericaexon
TCONS_00010765-exon-sc0000109-1510915933:456685..457183TCONS_00010765-exon-sc0000109-1510915933:456685..457183Clytia hemisphaericaexon
TCONS_00010765-exon-sc0000109-1575043694:456685..457183TCONS_00010765-exon-sc0000109-1575043694:456685..457183Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:456685..457183 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.10103	0.954383	0.277033	0.40655	0.494935	0.130368	0.314567	0	0.824729	0.25539	0	0.733282	0.406813	0.675966	0.486269	0.59639	0.275514	0.188262	0.650235	0.680424	0.946259	1.73082	1.8235	1.14773	0	0	0.167748	0.358051	1.08628	0.691715
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010765 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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