TCONS_00010761 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010761
Unique NameTCONS_00010761
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length540

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010761 ID=TCONS_00010761|Name=TCONS_00010761|organism=Clytia hemisphaerica|type=transcript|length=540bp
TCTTTAGTGAGTATCTTCTGTATTTATGTTATACTTTTCCTTCTGCTTTG
TAATAATTCTAcagttttctatttctattattGACTCATTTTGTATCTTA
ATAAACTGTTTTACCTAGTGTCACGGGCGGGCCGCTACGGCTCAATAAGT
AACTCCCGACAATTATCCTCAACAGCAATATTTATATTTGTTCCCCGACT
AGTTCAGGATCCCAAGCTATTATTGGAAGAGAACCGGTTAGGTATTATAG
AATTCAAAGCACGAGTAGTAGCAAGGTTTAAGTTTGATGCATCaattatt
caataaaataaataaccATAAAATCTACGTAGTAAAGTCTCTGTAATTAA
ATCAGTCCATAGTTCGTTTCTGCCATTTAACATTTACCCTCCGCTGTTGG
CTCAGCGGAGACTCTGCTTCATTTCGTCAGTACCATTTCACAATAACCCT
CCGCAGTTGGCTCTGCGGAGTCTCTGCTTCATTTAATTCGTCACGCTTCA
TAAGCGTCAGTTTACATGTATACTTCGGTGTCAAACAATA
Run BLAST on NCBI

transcript from alignment at sc0000109:421866..422405

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010761 ID=TCONS_00010761|Name=TCONS_00010761|organism=Clytia hemisphaerica|type=transcript|length=540bp|location=Sequence derived from alignment at sc0000109:421866..422405 (Clytia hemisphaerica)
TATTGTTTGACACCGAAGTATACATGTAAACTGACGCTTATGAAGCGTGA
CGAATTAAATGAAGCAGAGACTCCGCAGAGCCAACTGCGGAGGGTTATTG
TGAAATGGTACTGACGAAATGAAGCAGAGTCTCCGCTGAGCCAACAGCGG
AGGGTAAATGTTAAATGGCAGAAACGAACTATGGACTGATTTAATTACAG
AGACTTTACTACGTAGATTTTATggttatttattttattgaataattGAT
GCATCAAACTTAAACCTTGCTACTACTCGTGCTTTGAATTCTATAATACC
TAACCGGTTCTCTTCCAATAATAGCTTGGGATCCTGAACTAGTCGGGGAA
CAAATATAAATATTGCTGTTGAGGATAATTGTCGGGAGTTACTTATTGAG
CCGTAGCGGCCCGCCCGTGACACTAGGTAAAACAGTTTATTAAGATACAA
AATGAGTCaataatagaaatagaaaactgTAGAATTATTACAAAGCAGAA
GGAAAAGTATAACATAAATACAGAAGATACTCACTAAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006035XLOC_006035Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010761-exon-sc0000109-1491911889:421866..422405TCONS_00010761-exon-sc0000109-1491911889:421866..422405Clytia hemisphaericaexon
TCONS_00010761-exon-sc0000109-1510915933:421866..422405TCONS_00010761-exon-sc0000109-1510915933:421866..422405Clytia hemisphaericaexon
TCONS_00010761-exon-sc0000109-1575043694:421866..422405TCONS_00010761-exon-sc0000109-1575043694:421866..422405Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:421866..422405 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.374143	0.562985	0.510309	1.04374	1.19749	1.18648	1.61077	1.31058	0.850237	0.558221	1.2508	0.198714	1.29535	0.551722	1.18787	0.362992	1.74506	0.30547	0.357929	0.131984	0.477618	0.173076	0.131743	0.123632	0.625114	1.16557	0.321359	0.15685	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010761 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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