TCONS_00010748 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010748
Unique NameTCONS_00010748
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010748 ID=TCONS_00010748|Name=TCONS_00010748|organism=Clytia hemisphaerica|type=transcript|length=312bp
cctagatttgcttGCACacatacagtgcatttatcaagtccacccttaca
gtgcatttcggatattttgaaaaacatacccttaaccgccgcacaggTAG
GGACACAGATTATTTCAGCTGTGTTAAAGAAGTTATTGTGAACCAAAATA
CTTCTTTTTCAGGAATGTGTTAAGCGaaatatactttttattgcgCTCCT
GCCAAACGCAACCCACCTGGCTCAACCGCTTGACTGTGCCGCTTTCCGAA
GTCTTAAGGTTGAATGGAAAAAGAAACTTACCGAGTGGTGAACTGAGGTA
AAAACTTGACTA
Run BLAST on NCBI

transcript from alignment at sc0000109:66396..66707

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010748 ID=TCONS_00010748|Name=TCONS_00010748|organism=Clytia hemisphaerica|type=transcript|length=312bp|location=Sequence derived from alignment at sc0000109:66396..66707 (Clytia hemisphaerica)
TAGTCAAGTTTTTACCTCAGTTCACCACTCGGTAAGTTTCTTTTTCCATT
CAACCTTAAGACTTCGGAAAGCGGCACAGTCAAGCGGTTGAGCCAGGTGG
GTTGCGTTTGGCAGGAGcgcaataaaaagtatatttCGCTTAACACATTC
CTGAAAAAGAAGTATTTTGGTTCACAATAACTTCTTTAACACAGCTGAAA
TAATCTGTGTCCCTAcctgtgcggcggttaagggtatgtttttcaaaata
tccgaaatgcactgtaagggtggacttgataaatgcactgtatgtGTGCa
agcaaatctagg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006022XLOC_006022Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010748-exon-sc0000109-1491911889:66396..66707TCONS_00010748-exon-sc0000109-1491911889:66396..66707Clytia hemisphaericaexon
TCONS_00010748-exon-sc0000109-1510915933:66396..66707TCONS_00010748-exon-sc0000109-1510915933:66396..66707Clytia hemisphaericaexon
TCONS_00010748-exon-sc0000109-1575043694:66396..66707TCONS_00010748-exon-sc0000109-1575043694:66396..66707Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:66396..66707 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.344327	0.335773	0	0.381422	4.1791	1.10079	2.65612	2.48663	0.870474	1.79704	2.44195	0.45864	1.37401	1.42692	0.586561	1.04912	0.775456	0.264939	0.732055	0.766043	0.332915	0.974306	0	0.717859	4.06658	2.30957	0.944282	1.00776	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010748 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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