TCONS_00010742 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010742
Unique NameTCONS_00010742
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1715

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010742 ID=TCONS_00010742|Name=TCONS_00010742|organism=Clytia hemisphaerica|type=transcript|length=1715bp
tcgATCAttccagttagggttagggttggagacccaaacaatagcataat
tatactaattatgctaataatgatgtaatctttactaTACGAGATTTTTC
ATTGACCGCCCTCAGACAGTCACAAAGAACAGGACGAGTAATCTCAGCAC
TGGAATTGTCACTTGCAAGGTCATTCAATCCATCAACACcttatttcata
ttttactttttttataatgaagACCCCATACAATATTGTGGCAAATGATC
TGATTTGGAAAGATCACATTCAGAAAGAATACACAGCTGCAAACCAATGG
GATGATAAATGGGGCTTCCTTTCAtcatttatttcaaaagaaGTTTACAA
TGAgAAATCTGATGATACTGATACCAAGCCATCCAGGAGTAAAAAGAAAT
CTTCTGAAGGATTGAAGCTTCCACCGATCCACAGTAGAAGTGTTCCTGAT
AAATCATCTAAACCATTTCCACGAACATCTACACAATTTATCGGCTGGAA
ATCACAAGATGCTGAAAATAATTTGGAAAAATATGGGCGGTATACAAAAC
CTACTAAAACTTTCTTGTCAGAAATGCAATGGCCTCATGAAGCAATCGTA
TGAATATTGGGCTTGATTTTTAATCGATTGTTTTCATTGATTTTCCCAGT
TCTCTATCAATGCTCTCCGGTGTAGGACAACTTCAACTTTTGTAAAGGCT
GTAAAAACCCTTACAAGGTTGgattgtacatgtttttttttataagcata
caaaaatccgaaaacaggctcagtgattaggtcgaaagcttaataaggct
gaaaaatgcttgaggggatgcttaagtctaaagcataaatttagggaaat
actgagaATCTgtgaaattccagccaaaaaaagccaaaatcaggaaaaag
tattttattgtaggctcaagcaatgcttgccatatgcttaatttttcccc
acatctgatgcttataagtgcaatgcttataaaaaaacatgtaacatGTA
GCCATGGTTTAAGTTAATTCATCTAAGTTTCTAATTGTTAACCAAAGTTT
TTAATATAATACGAAACAGTCAACTCTCATttgaacctctattattcgaa
tctttctgtaattcaaacttaaaatttgtTTCCCTCAGCCGAAAagtagt
ttttttaatttttctctatAATTCCAATCGTTCTCTAATTCAAAGAAAGT
TTTGgtctcttgaagatcgaattagagagagtggcTGTATTCCCAGACTG
AAAGCTTGGGTTacaatagtaatattttttgaagtatgattttGACATAA
ACTGATTTTTCTACCTTAAAATTTATCGACTCTTCTTTTTATTGTACTGA
CAcgacaaaaataatattttggttGCAAGCAAATAAGCACTGCAAAATTG
AACAATATTCTTGTTCTTAGAACAGATTTTTTGACTACACGTTTTTAAGA
ATAGTGTATTTTGCCTGAGGTTCAAGTTTTCTTAGAAATTTTCCGAATCT
GAGGGTTAGATATTCATTCtaaacatattcttatttttcataaaaaattt
tcttttaataataTCTAAGATATCAAGAGCTTTTTTGGATGCTTTAACCC
GTTGGTAGGATTTGCCTGTGCCTCAAGAGCCATTGAACTAACAAAATAAT
ACCTGTAACAGGTGGTTCTATTCTCAGACTTTTTTGTGCGTATTATGACT
gccttttgatttttc
Run BLAST on NCBI

protein sequence of TCONS_00010742-protein

>TCONS_00010742-protein ID=TCONS_00010742-protein|Name=TCONS_00010742-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
MKTPYNIVANDLIWKDHIQKEYTAANQWDDKWGFLSSFISKEVYNEKSDD
TDTKPSRSKKKSSEGLKLPPIHSRSVPDKSSKPFPRTSTQFIGWKSQDAE
NNLEKYGRYTKPTKTFLSEMQWPHEAIV
Run BLAST on NCBI

transcript from alignment at sc0000109:490032..501376-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010742 ID=TCONS_00010742|Name=TCONS_00010742|organism=Clytia hemisphaerica|type=transcript|length=11345bp|location=Sequence derived from alignment at sc0000109:490032..501376- (Clytia hemisphaerica)
TCGATCATTCCAGTTAGGGTTAGGGTTGGAGACCCAAACAATAGCATAAT
TATACTAATTATGCTAATAATGATGTAATCTTTACTATACGAGATTTTTC
ATTGACCGCCCTCAGACAGTCACAAAGAACAGGACGAGTAATCTCAGCAC
TGGAATTGTCACTTGCAAGGTCATTCAATCCATCAACACCTTATTTCATA
TTTTACTTTTTTTATAATGAAGACCCCATACAATATTGTGGCAAATGATC
TGATTTGGTGAGTATTTTTTTAAACAGGTTTATAGCCACCCACCGCAAAA
TAACAGTCTAAAATTAAAAATTAATTGTGCACACAAGTTTTTGCACAATG
AATAGTTTAGGGGTCAAAAATGGATTTAAATCTCAGACCCTAGAAATTTG
CACCTGTTTGTTTTTGTGTATTTTACATACCGTCAACTGCTCTAACTTGG
GACAATTGGTCGAAATATGGGATGGGACTGTTGCGTGTGTTGTTTGTTGC
CAGGCGTACCCAATCGATAACATCGATTGTCGATTTAATCGATGTCAATC
GATAAAAGTCGTTCGTAATCGATGATCGATCGATTACTAATCGATGGCCA
ATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TGCTAATTTTCTGTATTTATGATCGCTACTCTGTGTACCAGAGTGTATCT
CACGATAATATCGTAGCGTACTTTAAGGGAAGAAATTTTCGCGGGAAGAA
CTTTTCACGGAATTTAATTTCGCGGTTTTTCGGCAAATCGGGTGAATTGC
CTTTGCACCAAATTTCTGAGCAATCCGAACAACAAAACCAACGGCGCAAT
TTTTTTTGTCCTTGCGGTACCGTGGTTTTTCTAATTTAACGCGTAGTCTA
ATTTAACGCGTACCCTGCTTTTGGCGAAAAATCGTAATTAATCTTACCAT
AGGACGGGGTGAATCGGATAGAATTGGAAGGTTTTGGGCAAATTGCCTCT
TCCCGACGAGACCTACCACCTAATTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAACCAGCGTGGACTCGCCATGAACACAAAG
ACAGGAGACAGTAATAATTCTATATGGTATTCAATGCTCAGATACATAGT
ATACTCGTAGTTGGCAGCAAACTTTCTAAGCTCTTATTTGGAAAATATGT
ACTTTTAATTCTTTTCTTAGCGAAAGAAAATACTTTATAACATTGTCTCT
CTCAGTGCCCGGTGAGAATTTTTATACGCTTTGGAAAAATGAAGGATAAA
AAACAGTAAGGAATAAAGAAAATAAAAATTTCTCGGGTTCTTAAATATCT
GGGGCATATTTTCTCATCGGGCCGATTATTTATTGCAAATTGTTCCACTA
GGAAGGGGCTCCACCGTGTCATACTTTCTTGCCTCTTTTAGCTTACCAAT
TTCCGCTTGCAGAAATATTTGCACCCCTGTCTCAGAGATGATTTAAGCCA
GGGGATGCGAGACCTCCGAGTGAATGAACAGCATATGAACGAACGGGAAA
TTATGTCTTGTCTCATACTGTACCCTGTCTCATTATCAAGCCTTTAGAAA
TATTCCCTTTCGTCAAAGACATTTCCTAGGAAGGACGAGAGACCGCGGCG
TCCGTTACTTTAATAAATGTTCTTATCTTGTTGTAAAGTGTTTGTAGCCT
TACCCTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCACATGAACAATGAGTGACTATTAA
CATTTGAACATTTATTCCTAGCTACTCTGAACACTAACAAGCCTCTTGGG
ATAGTGTGGCAGTAATTAAAAATGTCATGATGACGGCATTTGATATTTTT
TAATTATTCAATAATTAACTCCTTTCCATTTCTCGGTTCCGTATCACTTA
ACAACGCCTTCAGCTTGGGGCGCAAAAGGGCGATTCGCGTTTTAACGCGA
ACAATTTTCCGCCCTAACTTTAGAATGAAAATACGAAGAATAGACATTGT
TTTTCGTTTAGTGAACCAAAGATTGTATACAACTGGCTTTCGTAGAACAC
AATGCCAAAGGAATCTTCTTCTTCCCCCTCGCTTCATTATTTCTTATTCG
GCATTTCAAAAAAGGGTCTGAAAATCAGAAGGTTTTCTTCTTCAATTTCC
GAAGAACATGTTCCAAATCTTCGAAGCGATATTTTTCCGATAGCTTGATC
GATCAGTAAACGGGATCTGAAAACAGAATGGAAAAAGACATCGTCAGTGA
AGTATGAGAGGCGATTAAACAAGTTATCCGATTCACCCCGTCCTACGGTA
CTCTAATTATTAACCCGTAGCCAAAATTCTGCATAATTAATTTCACTCTA
ATTATTACGCGTGATCAAGCCTTGGACAAGAAAAATTAGACAGGAAAGTT
TTATTTTTGATAAACTTCTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAATTAAAGGGATCTTCGTCATCCTCCTCTGGCTCCTCCAA
ATCAGCTAATGCTTGTTAATACATTATACGATCTATATGTAATATATATT
ACACAAGCCTTTAAGTAACGCGTACTTAAAACACTTGAATATATCGTAAT
TAATTGTTCTCTAGTTTTTTACGCGTAGCGTCGAAAATAATTATTTATTG
CCACGCGTTAAATTAGAAAAACCACGGTAGGGCTGCGTTTTTAGCGAATA
TAAAGAAATCGATATTAATCGATAACAATCGAAAGCAATCAGCGATTAAT
CGATAGCAATCGATAACAATCGAATCCAATCGATAAGAACNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTTATCGATTAGTTATC
GATCACTATCGATTATTATCGATTAAAATCGATTAATATCGATTGATTTC
CCGTATCGATTTCATCGATTGGGTACGCCTGGTTGTTGACATCTGGCCTG
TATTTTCACTTACTGTTTAAATCTCTTTGACAAAAATTTGTTTTGATAAC
TCCACCAAGCTTATCAATCATACTTTTTGTCATAACATGAAATGTGTATC
ACAAAGATTAATGCTGTGAAAGCGCTATATTGTTTGCCTGATGACTCTCA
AGCAAAAAAATGCACCGCAAAACTTCTAACGGGATTCATGAAAAAATAAC
CCGGCACTTTTTAATTATTATTATTAAAATGAATATTACAGGGGTTGTAG
GCACTCAGTGGACCTCTAAACTGATCTCAATTTACACATTTTGTGTATCA
AATTTCTTTGGTTGGGTTTTTCATGCTTCTTTTTCAACTTTTCTTTGAAG
CCTTTCATGGAAACAGCAGCTACCACCTCAGACAGCAATTTATTCCACGT
AGGGATGGTTCTGTAGTAGAACGACTTTGTTTGCAGGCCGCGGAATCCAT
CACTTGCAAAGTTTGGCTGGAGTTCAACTTTGTGTTGTCGATTCGGACGT
TAATGAAATTAACTTTCTCAAAACTATGAGAAATTGCCTAAAATTTGAGC
CATAGTAGATGAAAGTTTGAGCCAAGCCAACCTTGAGAACTAATTTGATG
ATCAACTTCCCAAGAAAAAGATCTACGGGGGAGATGGGACCCACCTAGAT
CCACTGCCGAATAGGCTATTTCCTGGAATTTTGCTGGACCTCAAACACTG
ACCCATTTACATGTGCGGAATTGTTTTTACTTTAGCGTATAAACAAGGCC
TTAAAAATCAAAGCGCTTTCTCAGGAATTGAATGACAAACTTTGGTTGGT
TGATTTTGGCTGCTGCACGTTTTATTTTGTTTCAAACTTTCAAGTTTTAA
TTAATTGTCTTGTGAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
ATTCAGGTAACTTTCATCCTTGTTGTTGCAAATACATCCTGTAGATGACT
GATGTTGTTTTTTCTGAAAGCTTGATTTCCTAGTGTGACTAACTGTTAGA
GCAGTTGACGGTACCAGAACAGGCTTAAAAATGAATTTTTTTTCTCCAAA
GTTATGTCATGTTGGAGAGCATTTTTCATGCTCGTTTAGAAAAACATATG
CATATCTGAAAATGAAGCCAAAAAAAGTTATTGCGGAACGATGCTTGTAA
TCTTAAATCTGCTTTTTGTGTAATTGATCATGAATCAAATGTTTTATCCA
ACCATCTAAATTATTTTTGGTTGTGTGCATTTTTTTTGTAAGTACCAATA
AGAATCCCCTTATTAAAAATCAATTAATTCATAAATTTTTATTTCACTTT
AGGAAAGATCACATTCAGAAAGAATACACAGCTGCAAACCAATGGGATGA
TAAATGGGGCTTCCTTTCATCATTTATTTCAAAAGAAGTTTACAATGAGG
TATATACACGTTTTTTTTAAAGAACCTTAACTTGGCTCCGAGCTTGGAAT
TCCTTATTTTTCCAGAGAGTTTCAGCCTCAAAGTTCCCCATCAAGTTCTT
TTTTACTTAGCTGCATTCAGAATGTGGATAAGCATGGACCATTTTCAGCC
TTAAGTTCCTTACAATCGTGTTCTTTATAAAAAAACTGTGTCATCTTGAT
CATTGATTTTTTTTTAACTAGTTGAGAATCTCCACATTTGTTTGGAAAAC
AAATTGTGAATGTCCTGCCATGGAATCTATATATTAATACGCTTAAATGT
GTGTGTTTACATCATTTTGTAAAAAGTTTTCGAAAATCTAACAAAGCTCT
ACAAAGCCTCCTCTTCATGGCGTTGAACCATCATCTTTTTGCACCTTAAG
CAGATTTCCTACCACTAGACTAACTTTGAGACCCCAAGATACTATTTTCT
ATTCACCAACTTTTTGGAGCTTGATGGGTTAAAATCAACCATTTTCCCAA
TTTTTTTTGTCATTTTAAAGAATTCTTAATCTTAAAACTTTCTGTTCACA
ATAGCGGCTCCCTATCACTTTCAAAACTTTTCAAAACATTTTTATATAAT
ATTTTGTCGCCCAGTTTAACCTTTGGTCTTTTTGATGAATGTGCATTCTT
TTAAACCAGTAAGCCAGCTGTGGCTTGCGTAAAATTAGTTACTTCATTCA
AGGGTATAGCAAGAGTGTCTTTCAAACTTTCACTTTGAAATTGTCCCTGT
AATCTATATATTAATACACTTAAACGTGTGTGTTTACAACATTTTGTAAA
AAGTTTTCGAAAATCTAACAAAGGTTTACAAAGCCTCCTCTTCATGGCGT
TGAACCATCATCTTTTTGCACCTTAAGGTGGTAGTCTACCGAGAAATGGA
AAATCATCGAAAAAATTGTCGAATTTTGGTTTTTGGGTGTTTTGAGATCC
TTAGGTCTTTCTGAACATCTCCTGGAAATNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCAAGCTGTTAGCATGATTCTGCAG
ATTTCTTGGCAGGTTTTAGATCAAAACTTAATTTCTTTGATGGAAATGAT
TTGTTTAAATGAAGAATAGACTCTACAGGAGCCATAAAGTTGCTGTACAT
TGGTTATGTTGCTGGATTTCTACGAAAAACATTTAAGTTGCCGCCATTTT
GTTTTGAGGCGGTGTGTGCTTTTTGGTGGCTCACATAATGTTTTGTAGTG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNATACATTTCCTGAAAATTTCATTACGAAATGTAAAGAAGTTCTT
GAGTTATTGCAAAAAATGTGATTTTTTGACTTTTGAAATCTGGCGGTAGA
CTACCACCTTAAGCAGATTTCCTACCACTAGACTAACTTTGAGACCCCAA
GATGCTATTTCAACTTTTTGGAGCTTGATGGGTTAAAATCAACCATTTTC
CCAATTTTTTTTGTCATTTTAAAGAATTCTTATTCTTAAAATTTTCTGTT
CACAATAGCGGCTCCCTATCACTTTCAAAATTCTTCAAAGTCTTTCAAAG
TCACCCTCGAATGTCCAACCACGATGGCCAGCCACGATGGCTAAAAGGAT
CTAAAATATACTTTTGTTAAGCCATTTATTTAATTGTGGTTAAAAATTAC
AATGCAATGTATCTTCTTTCTCCTTTATTTCTTAAAATCAAAATCAAATC
ATCAATCGGCAGCTATCTTTCTGCCGTTAGAATTTTTTAGATGTGTAGTG
ATTCACTGGAATGGGACACGTAGCTTGTGACGCTGCGCATACGGCTAGTA
AGCCATAATACAGTAGCAGATTAGTCAAAAATTAGCAATAGACTTTTTTT
TTATGTTTTGTTTAAGTTTCTTAACTCCTGCCATTATGTAAGCAAACGTT
CGATTTGCTTAGAAGATCATTTCTACAGGTTCAAAGGTTTGTTTCCATAA
TGGGGGGAATTACGTAACTTAACAAAACATAAAAAAAGCTCTATACTTCA
AACGCATCACTTCAATATTTGTTTTTTCTATTAGAAATCTGATGATACTG
ATACCAAGCCATCCAGGAGTAAAAAGAAATCTTCTGAAGGATTGAAGCTT
CCACCGATCCACAGTAGAAGTGTTCCTGATAAATCATCTAAACCATTTCC
ACGAACATCTACACAATTTATCGGCTGGAAATCACAAGATGCTGAAAATA
ATTTGGAAAAATATGGGCGGTATACAAAACCTACTAAAACTTTCTTGTCA
GAAATGCAATGGCCTCATGAAGCAATCGTATGAATATTGGGCTTGATTTT
TAATCGATTGTTTTCATTGATTTTCCCAGTTCTCTATCAATGCTCTCCGG
TGTAGGACAACTTCAACTTTTGTAAAGGCTGTAAAAACCCTTACAAGGTT
GGATTGTACATGTTTTTTTTTATAAGCATACAAAAATCCGAAAACAGGCT
CAGTGATTAGGTCGAAAGCTTAATAAGGCTGAAAAATGCTTGAGGGGATG
CTTAAGTCTAAAGCATAAATTTAGGGAAATACTGAGAATCTGTGAAATTC
CAGCCAAAAAAAGCCAAAATCAGGAAAAAGTATTTTATTGTAGGCTCAAG
CAATGCTTGCCATATGCTTAATTTTTCCCCACATCTGATGCTTATAAGTG
CAATGCTTATAAAAAAACATGTAACATGTAGCCATGGTTTAAGTTAATTC
ATCTAAGTTTCTAATTGTTAACCAAAGTTTTTAATATAATACGAAACAGT
CAACTCTCATTTGAACCTCTATTATTCGAATCTTTCTGTAATTCAAACTT
AAAATTTGTTTCCCTCAGCCGAAAAGTAGTTTTTTTAATTTTTCTCTATA
ATTCCAATCGTTCTCTAATTCAAAGAAAGTTTTGGTCTCTTGAAGATCGA
ATTAGAGAGAGTGGCTGTATTCCCAGACTGAAAGCTTGGGTTACAATAGT
AATATTTTTTGAAGTATGATTTTGACATAAACTGATTTTTCTACCTTAAA
ATTTATCGACTCTTCTTTTTATTGTACTGACACGACAAAAATAATATTTT
GGTTGCAAGCAAATAAGCACTGCAAAATTGAACAATATTCTTGTTCTTAG
AACAGATTTTTTGACTACACGTTTTTAAGAATAGTGTATTTTGCCTGAGG
TTCAAGTTTTCTTAGAAATTTTCCGAATCTGAGGGTTAGATATTCATTCT
AAACATATTCTTATTTTTCATAAAAAATTTTCTTTTAATAATATCTAAGA
TATCAAGAGCTTTTTTGGATGCTTTAACCCGTTGGTAGGATTTGCCTGTG
CCTCAAGAGCCATTGAACTAACAAAATAATACCTGTAACAGGTGGTTCTA
TTCTCAGACTTTTTTGTGCGTATTATGACTGCCTTTTGATTTTTC

Coding sequence (CDS) from alignment at sc0000109:490032..501376-

>TCONS_00010742 ID=TCONS_00010742|Name=TCONS_00010742|organism=Clytia hemisphaerica|type=CDS|length=1161bp|location=Sequence derived from alignment at sc0000109:490032..501376- (Clytia hemisphaerica)
AAATCTGATGATACTGATACCAAGCCATCCAGGAGTAAAAAGAAATCTTC
TGAAGGATTGAAGCTTCCACCGATCCACAGTAGAAGTGTTCCTGATAAAT
CATCTAAACCATTTCCACGAACATCTACACAATTTATCGGCTGGAAATCA
CAAGATGCTGAAAATAATTTGGAAAAATATGGGCGGTATACAAAACCTAC
TAAAACTTTCTTGTCAGAAATGCAATGGCCTCATGAAGCAATCGTATGAG
AAAGATCACATTCAGAAAGAATACACAGCTGCAAACCAATGGGATGATAA
ATGGGGCTTCCTTTCATCATTTATTTCAAAAGAAGTTTACAATGAGATGA
AGACCCCATACAATATTGTGGCAAATGATCTGATTTGAAATCTGATGATA
CTGATACCAAGCCATCCAGGAGTAAAAAGAAATCTTCTGAAGGATTGAAG
CTTCCACCGATCCACAGTAGAAGTGTTCCTGATAAATCATCTAAACCATT
TCCACGAACATCTACACAATTTATCGGCTGGAAATCACAAGATGCTGAAA
ATAATTTGGAAAAATATGGGCGGTATACAAAACCTACTAAAACTTTCTTG
TCAGAAATGCAATGGCCTCATGAAGCAATCGTATGAGAAAGATCACATTC
AGAAAGAATACACAGCTGCAAACCAATGGGATGATAAATGGGGCTTCCTT
TCATCATTTATTTCAAAAGAAGTTTACAATGAGATGAAGACCCCATACAA
TATTGTGGCAAATGATCTGATTTGAAATCTGATGATACTGATACCAAGCC
ATCCAGGAGTAAAAAGAAATCTTCTGAAGGATTGAAGCTTCCACCGATCC
ACAGTAGAAGTGTTCCTGATAAATCATCTAAACCATTTCCACGAACATCT
ACACAATTTATCGGCTGGAAATCACAAGATGCTGAAAATAATTTGGAAAA
ATATGGGCGGTATACAAAACCTACTAAAACTTTCTTGTCAGAAATGCAAT
GGCCTCATGAAGCAATCGTATGAGAAAGATCACATTCAGAAAGAATACAC
AGCTGCAAACCAATGGGATGATAAATGGGGCTTCCTTTCATCATTTATTT
CAAAAGAAGTTTACAATGAGATGAAGACCCCATACAATATTGTGGCAAAT
GATCTGATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006018XLOC_006018Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010742-proteinTCONS_00010742-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010742-exon-sc0000109-1575043694:501120..501376TCONS_00010742-exon-sc0000109-1575043694:501120..501376Clytia hemisphaericaexon
TCONS_00010742-exon-sc0000109-1575043694:494978..495074TCONS_00010742-exon-sc0000109-1575043694:494978..495074Clytia hemisphaericaexon
TCONS_00010742-exon-sc0000109-1575043694:490032..491392TCONS_00010742-exon-sc0000109-1575043694:490032..491392Clytia hemisphaericaexon
TCONS_00010742-exon-sc0000109-1510915933:501120..501376TCONS_00010742-exon-sc0000109-1510915933:501120..501376Clytia hemisphaericaexon
TCONS_00010742-exon-sc0000109-1510915933:494978..495074TCONS_00010742-exon-sc0000109-1510915933:494978..495074Clytia hemisphaericaexon
TCONS_00010742-exon-sc0000109-1510915933:490032..491392TCONS_00010742-exon-sc0000109-1510915933:490032..491392Clytia hemisphaericaexon
TCONS_00010742-exon-sc0000109-1491911889:501120..501376TCONS_00010742-exon-sc0000109-1491911889:501120..501376Clytia hemisphaericaexon
TCONS_00010742-exon-sc0000109-1491911889:494978..495074TCONS_00010742-exon-sc0000109-1491911889:494978..495074Clytia hemisphaericaexon
TCONS_00010742-exon-sc0000109-1491911889:490032..491392TCONS_00010742-exon-sc0000109-1491911889:490032..491392Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:490032..501376 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.24452	5.81416	7.70759	7.6069	331.576	231.982	149.536	158.888	100.29	105.627	71.2013	94.2161	3.21882	2.97099	3.65676	3.84847	3.6506	4.79378	7.89093	7.07846	6.43716	7.71467	7.77009	8.62193	5.46968	7.97929	21.7017	22.5804	6.72402	6.06409
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020339Uncharacterised_C20orf85
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010742 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top