TCONS_00010727 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010727
Unique NameTCONS_00010727
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1927

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010727 ID=TCONS_00010727|Name=TCONS_00010727|organism=Clytia hemisphaerica|type=transcript|length=1927bp
aaaaatgaCTGGTCAAAAAGTTGCTCACTCTCCAGATGAACTGGAAGATA
AGGCTAACCGTACAAAAGAAGTGTCCGAAATGGATGTTGACGAATTTCTC
GAAAAAATCGGACGGTATGGATTAATGCAGAAATTATACGTCTTTATATT
TTGCTTGTTAATCATCCCGAGTACCTATCAAACACTGATCATGTCCTTCA
TCGGTAACAGCCCTGATTGGAAATGTGTTTCTAACAATACAGAATGTAAT
ATGACTGACATTCTCCCGAAAACTGATAAACGGAGATGTGATATGGATCG
AACAGTTTGGGAATatacaaaacaaaaatctttttccattGTTACAGAGT
GGGACTTGATATGCAGTGATGATTACATTTCATTCCTGGTCAACTCAGCC
ATGTTCATCGGTTGGGCGTTCGGTGCAATCATTCTGGGATGGATTTCCGA
CAAGTATGGTAGAAAGATTACTCTATATCCCTCATTCACAGTATGCATTT
TATGCTCATTTTTGATGAGTTTTGCGAACAGCATATGGTGGGTGTTTGTT
TTACGTGTTTTTATGGGATTTGCACAAGGAGGGATCGGTCTCACCCTCTT
CGTAATGGCATCCGAATTAGTTGGACCGAAATATCGAAGTTTTGCTGGTA
CAACAGTATGGGTTGCGTTCACGTTAGCTCTTTGCTTGATGGCATTACAA
ACGTATTTTGTTCAAGAATGGAGAAGCCTTCTTCAAATAACTTCCATTCC
TTATATCGTGTTACTACCAACATATTTTTTGGTTCCAGAGTCTGTCCGCT
GGTTGCGACTAAATGGTAGGATTGAGGAAGCAGAACAAATTCTCCGTAAA
GTTGCCCACAGAAATAAACAACCGTGGCCTAACGCAAAACTTTCTACACC
AGCTACAACAGCAGAGGTGGTGTCAGCAAAATATTTGTTCGTACCAACAA
AGATGTGCATCTCAACATTAATTCAAGTTTTTGCATGGTTTTCTGTATCG
TTGGTGTATTACGGTATATCGTTAGCATCAGACAACCTTGGTGGAAGCAT
GTATCGAGATTTTGTTTTGACAAGTGTTGTAGAAATTCCTGCAAACATTC
TGGCCATGTTCACGCTAAATATATTTGGTCGACGCCCTACAACATGTGGA
AATTGGGTGATCAGTGGCGTTTCTTGCATGGGCGTGGCTTTTATTCCAAC
TCATGGCGTCTACAATTGGATTCGAGTAGCATTCGGTATGCTTGGTAAAC
TATGTGTTACATTGGCTTTCAGCGCTCTCTTTGTTTGGTCTGTCGAGTTA
TACCCAACTGTTATCAGATCACAAGGAATGGGCCTGATGAACGTTGTCAG
CCGCATCGGTGGCGCAAGTGCACCCTGGGTGGCTCAATATTTAGGAAACT
TCAACAAATATCTCCCCTTCTTAGTGATGGGGTCATTATCTTTGATCAGT
GCTGCATTGTGCTATAAGTTAAACGAAACGACGGGAATGGCTTTGGCTGA
AACGTTAGAAGATTTCAACCAATCAGATTCGAAGGAGAGCAAAACAATGA
CAACAATTATCGAAAATGATTTCACAAAAGAGGAtgaaaaggaacaaaaa
gaaaacacttCTGTTTGAAGACGATGCACATACAGCtgactctctctctc
taattcgattttcaagggaccagggatttttttcttcgaattagagaaag
attccaATTACAGAGAATATTTTATACTATTTTCATCtggaggggaccaa
tattttagttcgaattatagaaagattcggatagtagaggttcgaattag
agagagttgtaTTCATTCTTTAAAGATCAACATTTCAAGACAGTTTTTAA
AATGGATAActagatggtttgagatatttggcctgTAGTAACCTTCTACG
GTCCCAAATAAAACCTCCAAGTATTTT
Run BLAST on NCBI

transcript from alignment at sc0000109:115972..125881-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010727 ID=TCONS_00010727|Name=TCONS_00010727|organism=Clytia hemisphaerica|type=transcript|length=9910bp|location=Sequence derived from alignment at sc0000109:115972..125881- (Clytia hemisphaerica)
AAAAATGACTGGTCAAAAAGTTGCTCACTCTCCAGATGAACTGGAAGATA
AGGCTAACCGTACAAAAGAAGTGTCCGAAATGGATGTTGACGAATTTCTC
GAAAAAATCGGACGGTATGGATTAATGCAGAAATTATACGTCTTTATATT
TTGCTTGTTAATCATCCCGAGTACCTATCAAACACTGATCATGTCCTTCA
TCGGTAACAGCCCTGATTGGAAATGTGTTTCTAACAATACAGAATGTAAT
ATGACTGACATTCTCCCGAAAACTGATAAACGGAGATGTGATATGGATCG
AACAGTTTGGGAATATACAAAACAAAAATCTTTTTCCATTGTTACAGAGG
TATTAAAATCTTATTAGTTTTTTTCGAAAAACAAGAAATTATATTGTTAC
ATTATTTTGTCTTCATATTTTTTGATGACAATGGAACTTTTAGTTTTTGT
TTTTGAGACTTTAATCCGGGGGGGTAGGGCAAGATGGGTTACGGGGATGC
TCCGCTGGTCAGGGTACCTTTTTTAACCTCCACGAGTCCCAGGTAGGGTC
GCAAAAACACCACAATAGAAAAATCAGTCACTCGTAGGGTGCCTATTTTT
GGAAAATTTGAGAAAATTTTGGAATTTCAGTCCCAATCAGGGTCACATTT
TTTGCAAATTTCGAGTCCCACGTTGGCTCCATTATTCGAACCTCAGCGGA
GCACCCCTGTCGGTCGCGGGACTTTGATATCTTCTTGGATATTTTAATTC
AGACTTTTCCGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGGGGGGGGGGGTACTATGTTTGCGAGGTGACGGGTGTGTCCGAGATAAG
CATCGAAAAGTAAAAAAAACAACTGAATTTCGACGTTTTTGAAACCCTTT
CAGAGAATCAACTGCTCAATTATCGTTTTTAGTACCCCTTTTAGAGACTT
AAGAGGGTTTAAAAAAGGGACCCTTAAGGCCAAGTATCCCCGTCCGGGAG
ATTTGGCAATGCTTTTCGATAATTGATATCATTTTTGAATCACGCATCTT
GAATACACCTTTTCGACCGTAGTCGCGCGGTCAGGCGCGTGCCACTTTAT
TATTTAATTATCCCCCTAAACTCGATCCAATCCAATCTTTTTTTTACACC
TTTTACTATTATCTAAAGGTGCGAAAAACAGACTGGGACGGTTTTAGGGT
GGTAAAACGGACAAAAAAATGCACGCGCGGCAATTGGCGGCTACGGTCGA
AAAAATGTATAAAACAAAAACTACTGCTAACTGACATTATCAGAGCAGTA
ACCTGTTTATAATCTTTCTACATAGTGGGACTTGATATGCAGTGATGATT
ACATTTCATTCCTGGTCAACTCAGCCATGTTCATCGGTTGGGCGTTCGGT
GCAATCATTCTGGGATGGATTTCCGACAAGTAGGTTATTTTGAAACTTTC
TCTTATTTTTATAGATAAAAAGAGAGTCTCATTAGGACACCCCCCTCTCA
CAGACCCCACTGAGACTCATTCCCACTAGAAAAATTGGCCAGAATATCGT
TCCTGGTGGAAACTTAACCTCCCATTTTTGTCCCCACTGAAAATAATCAC
ATAAACCAATCTTCACTGCAAAATATTATGCCATTTTTCCATCCCGACTG
AATTTTCTGACTTGAAAACAAAAAGAATTGAAATACGAACCTTTTCGAGT
CAAAAAGAAATTTCTTGGAAATGCGTGAATACCCCTTGACAATGGCAAAA
TTTGCAAAAAAAAACCCTTGAAAAATGCTTTTCATGCCTTAAAGTGAGGG
TGAACGAACTAAAAATCAGTCTTTTACCCCTTAAAATTTCAGAATTACCT
TTTCTCCGCTGAAAAAATGAAAAAACTCGCCTTTAAACTCCTTGGAAATT
CTTCATTGATTATCACCCCCTGGAAATGTTCGACCATAAAAGAAGTATCG
TTAAATCTAAAAATTAATGTCTGCCTTAGTTTAGACCTAAACGAGACTTG
AACTAACCAATTAACATCAGCTTTGAACACCCCCTTCTCGCAAACCCGTT
AGGATTGTGTCAACCAGTGGGGGTAAAAATAACGGACCAAAACTCTATGG
GATTTAAATTCCATTGTTTTCGAACCAGAATATTCAGTGGGGATGGAAAA
ATAGCACAATATTTTGCAGTGAGGACTGAATTATCTGATTATTTTCAGTG
GGGACTAAAATAAGAGTATAATTTTGCAACTGGGCTATTTTGTCTAGTTG
GTCTGTGAGGAGGGGGTGTCTTTGAGAAAGTGATGTCTCTCTAAATCATA
TTTAAACATATGAACTTTTTTAAAGCATAGACACATGAATATTTAAATGT
TTAAAGGCAATCATTTCATTTTTTTTCTGTTTCAAGGTATGGTAGAAAGA
TTACTCTATATCCCTCATTCACAGTATGCATTTTATGCTCATTTTTGATG
AGTTTTGCGAACAGCATATGGTGGGTGTTTGTTTTACGTGTTTTTATGGG
ATTTGCACAAGGAGGGATCGGTCTCACCCTCTTCGTAATGGCATCCGAAT
TAGTTGGACCGAAATATCGAAGTTTTGCTGGTACAACAGTATGGGTTGCG
TTCACGTTAGCTCTTTGCTTGATGGCATTACAAACGTATTTTGTTCAAGA
ATGGAGAAGCCTTCTTCAAATAACTTCCATTCCTTATATCGTGTTACTAC
CAACATATTTGTAAGTTTTATCACGTGTTCTTCTGATACATTCCTTCGAT
TCTCATCAATTAAATCATCAAATTAAAGTGGCCTTTAAAGGGACATAAAA
GTAGTAAAATGTAAACATTGCGCGAACAATTAAAATCACGTGTCCAAAAC
AAACTTGTAAAACAATTGAAACACAATCAAAATCAGCCATATTTATTTTA
ATTTTTTATTTTGACATGTGACATTTGTTTTGATTTTGTATCCCGCTGCA
TACGGTTTGTTTACAAATTTCGTCAGTAGCTTTATGTCCCTTTAAAGAGG
TCTTCAGGAGCTCTTGGTTCCACCATTTTCCTCTTCATTTTAATTAAAAA
CAACTAAGGAGCAACAAAATGAGAACCAACCCCCGTTCCCATCCCTCAAA
CCGGATTGTATGGCTAGAATTCTCTAATTCAAGGGATCTTCAAGGGGCCA
GGAATTTTCTTCGGATATAAGAAAAATTCGAATTATAGAGAGCGTTTTAC
ACTTCTTTCCAGTCAATGTTTTAGTTCGAATTATAGAGGTTTGAATAAAG
TTGACTGTATATTGAAGCCAACAAATCCTACCAAAGTTGCACGGCCTTGA
GCGGCTGGTCCTGGTTTTTACACAAATGACAGATTGAAACTAAAATCATA
GTATAAGAAAGCCGCGGCTGGAATGATCACATCTGAATTTCTGTTGTTCT
ATCTCTGTCGTATTTGATGACTATTTGTTGATCAAGAAATCAGTAATGCA
GCATCTTTGGCTGCGTTTAGACCAGCCTGGCATTTGTAATTGCTTGCAGT
ATTGTTTTGAATTCTATTTTTCCACGCAATTGTTCGGTTTGTCAAATGCC
TAATGATGCCAGCGTGTTGGCATTTCGTTGGCATTCGAAATGCCATTTTG
AGCAAAGGAATCCCCTTTTCTGGCATTTCAAATCAAACAAAGGAACCAAA
ACAAAGAGAAAAATTACATTTTTGATTTTTTAAAGTATTTGCACGTTTTT
TATTCAGTTCTTTCTATAGATTGTAAAATTTGCAAGATTTGCCATAGCCT
AGCCCTACNTGATTTTTTAAAGTATTTCCACGTTTTTTATTCAGTTCTTT
CTATAGATTGTAAAATTTGCAAGAGTTGCCATAGCCCAGCCCTACGGCAA
AAAGTTTCAGTCTTAATGACTGCAGTTTTTGAGAAATTCCATGCTTTTCA
TTGTTTGATCTGTCAAAGTTGAACTTGAGGGAATCACCTTTTCAGTAATG
ACTCTAAAAAGACGATTCCTTAAATGCCATGACAGAAAATACAATGGAAA
AGCTATTAAAATCTAATCCTTCATGAGCAAATGCCAAATTACAAATGCCA
GTTGGTCTAAACGCAGCCTTTAATGGTAAATTTTATTGGTTTGTCGTTAA
TACTTACTTCTCAGTGCGTTTTAGACACTAATGATATGCTCTTGATAATA
CACTTGCATTATAAATTCATTATATGGAAAATTAACACTAAGAAATTGAA
ACAAACACAAAATATGGCTGGGCTGAAAGAACTCAAAAATTAATGAGGTG
CCTCGAAATGCCTTCACAATATTTCAGTAAAATCTTTTTGGAAATGAACG
AAAAAGTACATCAAGATAATACTGTGAAAATTTCAAGCTAGCACCTTCAA
AATTTATCATTTAAACTGACAGGAAAGTTGTCATCTCGACTATAGTTCTT
ATAATTTCAATTTTGGCTAAAAACTATTGTTTCCACAAATATCCCTAAAA
TATGTCCAAAATTAGTTCAAGTGTTCTATTGGGTACAGACTCGAAGATAT
CTAGCAACAAAAAAACTTTTTGTGAAGGAAAATAAGAGAAAAATTTCAAA
AACTATCTACCAATAATAAACTGAGCATCTTGATGTTCTTATAAAGCTCG
GAGACAGAGATGGAACATCAATTAACTGAAAAAACAATACGATACATATT
CCAGCCGCGGCTTTCTTATACTATGCTAAAATTTACAACTAAATTTCGAA
AAAAGTATCAATCGTAAACAAAGGAATTCCTAGATTCAATCTGTCGTCGA
AAATGCGGCGCATTTTTTAATGCTTCACTTTTTCTTGCCTGAGAAAGGTT
AGAGATTGAACTCTAGCCCTTCCGGCTTTAAACTCAATGGTTGTAGGGGT
TCGAAATACCGTCTCTGGTCAAATCCTGGAATCCCGAAAATTGAAAAAAA
TAATAACACCGTCACACCGGATGTAGAGGTTAAAATACCGGCATAATAAC
AAAAAATAAGGCTAAATACCGTCACCGTCTGATTTTAAAATACCGTTTTC
CCGTCTCATTTTTCGTTAAATCCCGTAACACCGTACTACAATAGGGCCAA
TCCCGCCCCACCGTAAAAGTACTAACCCCCTCTTTAGAATGAAGTAATTT
GTCATTACAAAATTTAACGTAACATATAATTCAGTTTGGTTCCAGAGTCT
GTCCGCTGGTTGCGACTAAATGGTAGGATTGAGGAAGCAGAACAAATTCT
CCGTAAAGTTGCCCACAGAAATAAACAACCGTGGCCTAACGCAAAACTTT
CTACACCAGCTACAACAGCAGAGGTGGTGTCAGCAAAATATTTGTTCGTA
CCAACAAAGATGTGCATCTCAACATTAATTCAAGTTTTTGCATGGTAAGT
ATTATTTTGTGAATGAAAAGTTCCTACTACCCTTAACAATTGTAAATGTC
AAGAGTTTAAAATCGTTTCAAACAGATAGCTGAGCCCCAATGGAGTCTCT
GATAACGTTATAACGCCAAAATAAATTCTTATAATGTACATCCATATGTC
GAAAATGTTAACCTATCATGACATCATACCAGAAGATTTTTCTAANCCAA
AATAAATTCTTATAATGTATATCCATATGTCGAAAATGTTAACTTATCAT
GACATCATACCAGAAGATTTTTCTAAACAATTGTGTATCACATTTTTTCA
GAAATATCATATCATCACGCCCAAAAATAGACCCAATCACGCCATCACCC
AAACCAGCTCTTAGAGCCCTTGAGAAATGACTAGAAACGTCTAATACGAC
AAAATACTCACAAAATGCTAAACATAATACAGTCGACGCTCTCTAATTCG
ATTTTCAAGGAGAATTCAAATTTCATCGAATACGGGAGCGTATCGAAATA
TAGAATGTCGAAATAGAAGAGCGTTGTTTATGAGAGTTTCTTAAGGAGAT
TTGACGGTCACTTTTGATTTGATCGAAAAGGGGAGCTTATCGAATTATAA
AATGTCGAATTAGAAGAGCGTTGTTTATGAGAGTTTCTTAAGGATATTTG
ACGGTCACTTTTGATTTGATCGAAAAGGGGAGTTTATCGAATTATAAAAT
GTCGAATTAGAGAGCGTCAACTGTAACAAAGAAAGAGAATTTTAAGGCTT
AAACCCCCCAAAAAATAAAGATGAAGATTTTGTTATTTTCAGGTTTTCTG
TATCGTTGGTGTATTACGGTATATCGTTAGCATCAGACAACCTTGGTGGA
AGCATGTATCGAGATTTTGTTTTGACAAGTGTTGTAGAAATTCCTGCAAA
CATTCTGGCCATGTTCACGCTAAATATGTAAGATTCCAGAATTATGATAT
GGGACAGTGTTTAAACCTAAGAAAAAGACCGCGAAAATGCTTAATCTTTC
TTTCTTTCGGACCGAAAAATAAGTTTTGCGATCGCAGTCTGAGGCGACCC
GAAGGCTCCCTTTTTATATTCAGTCGGAAGAGAGGGAGAACACTTCTCTT
TCTCCACCAAACCTTGCTCCGTATCTCCAATTTCTGAGTATCTAGAGTAA
ACACGGGCCCCATTTCTCTCTTTAAAGATTTGGTCGACGCCCTACAACAT
GTGGAAATTGGGTGATCAGTGGCGTTTCTTGCATGGGCGTGGCTTTTATT
CCAACTCATGGCGGTAAGTCTTCGTTGTCCAATCAGTAAAAGAGTTTTGT
AAAATGGTGGATAGAATCTTATGTGGAAACCACTCTCTGAAGAATTACTC
TAATATCGGCCCTTTTTAAGCGGGCCCTAGTTTAACGCCGGCCCTTATTA
TGCCACAGCCTAATTTTGGTCCTACGCCAATTAGGGCCGTTAACAACGCC
AAAATTTGTAAAAATGGCTACTTTTATGCTTCAAATTAGTAAATAATGAC
TAAAATTTACATTAAAATTTCATTTTTCAATAGGCTTTTAGGTTAAAATT
GCAAAATCTTGGCCCTTTTTACGCCGCCCTTTTAACGCCAGCCCTTATTA
CGCCACGAGCCAAAAAATAACGCCAAAAAGGGCCGGTGTAAAAAAGGCCA
ATAAGGTACTTTTCTAGAGTCTATTTTTGGCAAAAGTTTGCCTTTTGATG
ATCTTTGATAAAGTCCAGTGAAGTATACTAGGAATAGGCAGATTAGACCA
CGTCGAACGTACTTGCTCTATTGTCTCTATTTTCTAGTAGCACTTTGCAT
AGGTCACCATTTTTTAAAGAAGTCTTCAAAATTTCTTCAAGGTCTGGATG
ACAAGAATAGTCATATAAATTACGTTACGACATCACTTGCTTCGTATTCA
AACAATTTTCATGGTGATTATATCCCTTGAGACATTTAATGATTTTTTTA
TGAATAGAAAGTAGTTGTAATAAAATCCGCTTGGAGTTAATCACCATGGC
AATAATTTCAAAACGAGGCAAGTGATGTTCGTGACGTAATTTATGAAAAG
GTCTATTATTGGGTGTTTCTGTAAACATTACGTCATTAACACCACAATTT
ACTTTTTAGTCTACAATTGGATTCGAGTAGCATTCGGTATGCTTGGTAAA
CTATGTGTTACATTGGCTTTCAGCGCTCTCTTTGTTTGGTCTGTCGAGTT
ATACCCAACTGTTATCAGGTAATGTTATACGTTTTTTTTGCTTTTTCATT
TTAATTTTTTGGGAAACTCATCCTGAAATATTATTACATTATTCTTAGGT
TATGATCCGAACCCAAACTAAAGTCACCATGTAATACAGTCGCCAAATTT
GACATATGTATTCTCTTCTTTTTTTGCGTATACTCCACTTTTAGTCTGAT
TAGCTTTTGCGAGAATTAATTTTGCGTTTTCTCGATTTTTGCCAAAAACA
TAACTCGCGAAATCGCGTGGAATTGCTGACTCCCGAAATTAATTCTATGC
GAAATATATTGATCAGATTTACGACTTTAAATATCCTGTAAATTTGCTAT
TAGTGCNAATTAATTCTAGGCGAAATATTTTGATCAAATTTACGACTTTA
AATATCCTGTAAATTTGCTATTTGTGCAATTTCAGGGTCATTTTCGACAT
TTTGGCGCTGATTTACAAAATTAAATCTACGCGAAACCGCGAAACTATTT
AAAACGCGATTCACGTAAATAAATCTCCAAAAGTATGTCTTTGGTTCAAA
ATTAATATAAGTGAAAATTGCGATAAGTGAATCTATCTTCTAAAAAATCT
GCCTCTTTCAGATCACAAGGAATGGGCCTGATGAACGTTGTCAGCCGCAT
CGGTGGCGCAAGTGCACCCTGGGTGGCTCAATATTTAGGAAACTTCAACA
AATATCTCCCCTTCTTAGTGATGGGGTCATTATCTTTGATCAGTGCTGCA
TTGTGCTATAAGTTAAACGAAACGACGGGAATGGCTTTGGCTGAAACGTT
AGAAGATTTCAACCAATCAGGTACACGATTATAATTTTCATACACGTATT
TTTTTATAAGAACAAACTATATAAGAACATGAGGCTTCGATGGACAAAAT
GTTAAGAACAAGTTAAGAACATTTTAAGGCTTTGGGGACACTAAAAAACC
TTATTTCTTAAGAAAATGGACAAAAATACTTAAAAAATGGGAGAAAATAA
GAACATGTAAAGAATATTTTTAGGCTTAAAACTCAAAAAGATAAGAACAA
CCGAAAAAAACTGTGTATGATTCGTTTTTTTAGTACATAATGATTTTTCC
AAGTCATTGCAGTAATCAATTTTTTATGGTTGAACACATTTTGCGAATTG
ACATACGTTGACGTTGATAAGTTTTGCAAAGGTAATAGCGATAGAAAAGA
GGTCTTGAATTCCCAAGCGAATTGAATGATTATAAAATTTAACTTTCTGA
AGCTTATTTTTCAACTACCCGAAGTAGAAAAAGAACAAAGAAATTCGCTT
TGTGTACATAAGTTGCATTGCAATTCGAATGTCAAAAATTTTCCCTTTTT
CTCTAAAAAAACTATGATTTACTAATGATTATTTACTGACGATTACCTCT
GAATCGTATGTTTTGTCGTGCAATTAACGAATAATCACTCGTAACAAAGG
AGAAAATACCGTAATTTGCACTCGTCCTTCGGACTCGTGCAAATTACGAT
CATTCAATTTATTAATGCACGCAAAAGAGAAAGAAAGTATTTCCAAAGTA
TTTTCAAAAGGCACGAACTTTTTTCCGAAAGGCACAAACTTTTTTCCAAA
AGGCACGAACTTTTTTCCGAACGGCACGAACTTTTTTTCAAAAGGCACGA
ACTTTTTTCCGAACGGCACGAACTTTTTTTGGAAAGGCACGAAATTTTTT
TGGAAAGGCACGAACTTTTTTTCAAAAGGCACGAACTTTTTTTCAAAAGG
CACGAACTTTTTTTTCAAAGGCACGAACTTTTTTTCGAAAGGCACGAATG
GCACGAAGGCACGCAAGGCACGAAAAAAATCACACTCGGGTGGTACAGTC
ACTTTCGGTTGGGGTTGTGTCTATTTTTAGTAATGCAGGATTTTTCCCTC
TATTCACAGATTCGAAGGAGAGCAAAACAATGACAACAATTATCGAAAAT
GATTTCACAAAAGAGGATGAAAAGGAACAAAAAGAAAACACTTCTGTTTG
AAGACGATGCACATACAGCTGACTCTCTCTCTCTAATTCGATTTTCAAGG
GACCAGGGATTTTTTTCTTCGAATTAGAGAAAGATTCCAATTACAGAGAA
TATTTTATACTATTTTCATCTGGAGGGGACCAATATTTTAGTTCGAATTA
TAGAAAGATTCGGATAGTAGAGGTTCGAATTAGAGAGAGTTGTATTCATT
CTTTAAAGATCAACATTTCAAGACAGTTTTTAAAATGGATAACTAGATGG
TTTGAGATATTTGGCCTGTAGTAACCTTCTACGGTCCCAAATAAAACCTC
CAAGTATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006013XLOC_006013Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010727-exon-sc0000109-1575043694:125533..125881TCONS_00010727-exon-sc0000109-1575043694:125533..125881Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1575043694:124403..124506TCONS_00010727-exon-sc0000109-1575043694:124403..124506Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1575043694:123122..123445TCONS_00010727-exon-sc0000109-1575043694:123122..123445Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1575043694:120488..120697TCONS_00010727-exon-sc0000109-1575043694:120488..120697Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1575043694:119555..119689TCONS_00010727-exon-sc0000109-1575043694:119555..119689Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1575043694:119219..119304TCONS_00010727-exon-sc0000109-1575043694:119219..119304Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1575043694:118264..118372TCONS_00010727-exon-sc0000109-1575043694:118264..118372Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1575043694:117462..117670TCONS_00010727-exon-sc0000109-1575043694:117462..117670Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1575043694:115972..116372TCONS_00010727-exon-sc0000109-1575043694:115972..116372Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1510915933:125533..125881TCONS_00010727-exon-sc0000109-1510915933:125533..125881Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1510915933:124403..124506TCONS_00010727-exon-sc0000109-1510915933:124403..124506Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1510915933:123122..123445TCONS_00010727-exon-sc0000109-1510915933:123122..123445Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1510915933:120488..120697TCONS_00010727-exon-sc0000109-1510915933:120488..120697Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1510915933:119555..119689TCONS_00010727-exon-sc0000109-1510915933:119555..119689Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1510915933:119219..119304TCONS_00010727-exon-sc0000109-1510915933:119219..119304Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1510915933:118264..118372TCONS_00010727-exon-sc0000109-1510915933:118264..118372Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1510915933:117462..117670TCONS_00010727-exon-sc0000109-1510915933:117462..117670Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1510915933:115972..116372TCONS_00010727-exon-sc0000109-1510915933:115972..116372Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1491911889:125533..125881TCONS_00010727-exon-sc0000109-1491911889:125533..125881Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1491911889:124403..124506TCONS_00010727-exon-sc0000109-1491911889:124403..124506Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1491911889:123122..123445TCONS_00010727-exon-sc0000109-1491911889:123122..123445Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1491911889:120488..120697TCONS_00010727-exon-sc0000109-1491911889:120488..120697Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1491911889:119555..119689TCONS_00010727-exon-sc0000109-1491911889:119555..119689Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1491911889:119219..119304TCONS_00010727-exon-sc0000109-1491911889:119219..119304Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1491911889:118264..118372TCONS_00010727-exon-sc0000109-1491911889:118264..118372Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1491911889:117462..117670TCONS_00010727-exon-sc0000109-1491911889:117462..117670Clytia hemisphaericaexon
TCONS_00010727-exon-sc0000109-1491911889:115972..116372TCONS_00010727-exon-sc0000109-1491911889:115972..116372Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:115972..125881 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.70179	3.71793	2.81837	1.71604	0.055697	0.0236197	0	0	0	0.0398236	0	0	0.268672	0.335452	2.36029	3.78278	9.8029	5.68361	0.0774289	0.138805	1.5036	1.53831	2.3693	2.341	0.376766	0.831733	0.246704	0.586334	8.45556	2.92479
Blast
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BLAST of TCONS_00010727 vs. Swiss-Prot (Human)
Match: S22A4 (Solute carrier family 22 member 4 OS=Homo sapiens GN=SLC22A4 PE=1 SV=3)

HSP 1 Score: 231.106 bits (588), Expect = 1.016e-66
Identity = 161/557 (28.90%), Postives = 265/557 (47.58%), Query Frame = 2 
Query:   83 DVDEFLEKIGRYGLMQKLYVFIFCLLIIPSTYQTLIMSFIGNSPDWKCV------------SNNTECNMTD-----------------------ILPKTDKRRCDMDRTV----WEYTKQKSFS-IVTEWDLICSDDYISFLVNSAMFIGWAFGAIILGWISDKYGRKITLYPSFTVCILCSFLMSFANSIWWVF-VLRVFMGFAQGGIGLTLFVMASELVGPKYR-SFAGTTVWVAFTLALCLMALQTYFVQEWRSLLQITSIPYIVLLPTYFLVPESVRWLRLNGRIEEAEQILRKVAHRNKQPWPNAKLSTPATTAEVVSAKY----LFVPTKMCISTLIQVFAWFSVSLVYYGISLASDNLGGSMYRDFVLTSVVEIPANILAMFTLNIFGRRPTTCGNWVISGVSCMGVAFIPTHGVYNWIRVAFGMLGKLCVTLAFSALFVWSVELYPTVIRSQGMGLMNVVSRIGGASAPWVAQYLGNFNKYLPFLVMGSLSLISAALCYKLNETTGMALAETLEDFNQSDSKESKTMTTIIENDFTKEDEKEQKENTSV 1615
            D DE +  +G +G  Q+L  F+    IIP+ +  + + F+  +P+ +C             +N+    + D                       + P  D     +++      WE+++    S +VTEW+L+C D++   L  S  F+G   G+ + G +SD++GRK  L+ +  V    SFL  F+ S W +F VL V +G  Q    +  F++ +E++G   R  F+   V   F +   L+ L  YF+++WR LL   ++P ++ +P ++ +PES RWL    R  EAE I++K A  N    P     +      +   K     LF    + I T++ +  W   S+ Y+ +SL + NL G  Y +  L++++EIPA I A   L    RR          G   + +  +P    Y ++ +   MLGK  +T AFS L+V++ ELYPT++R+  +G+ +  SR+G   AP+   YLG +N+ LP++VMGSL+++   L     E+ GM L ETLE   +     S   T          D  E +EN  V
Sbjct:    3 DYDEVIAFLGEWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCRVPDAANLSSAWRNNSVPLRLRDGREVPHSCSRYRLATIANFSALGLEPGRDVDLGQLEQESCLDGWEFSQDVYLSTVVTEWNLVCEDNWKVPLTTSLFFVGVLLGSFVSGQLSDRFGRKNVLFATMAVQTGFSFLQIFSIS-WEMFTVLFVIVGMGQISNYVVAFILGTEILGKSVRIIFSTLGVCTFFAVGYMLLPLFAYFIRDWRMLLLALTVPGVLCVPLWWFIPESPRWLISQRRFREAEDIIQKAAKMNNIAVPAVIFDSVEELNPLKQQKAFILDLFRTRNIAIMTIMSLLLWMLTSVGYFALSLDAPNLHGDAYLNCFLSALIEIPAYITAWLLLRTLPRRYIIAAVLFWGGGVLLFIQLVPVD--YYFLSIGLVMLGKFGITSAFSMLYVFTAELYPTLVRNMAVGVTSTASRVGSIIAPYFV-YLGAYNRMLPYIVMGSLTVLIGILTLFFPESLGMTLPETLEQMQKVKWFRSGKKT---------RDSMETEENPKV 546
The following BLAST results are available for this feature:
BLAST of TCONS_00010727 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22A41.016e-6628.90Solute carrier family 22 member 4 OS=Homo sapiens ... [more]
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