TCONS_00010711 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010711
Unique NameTCONS_00010711
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length891

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010711 ID=TCONS_00010711|Name=TCONS_00010711|organism=Clytia hemisphaerica|type=transcript|length=891bp
AATTGTTAAAAGGTTGGAAACGGAGACATGatgaagaAAGCCAATCACCA
TTTTCACAATCCAGCTTTGGGGCAGCATCTAATAACGAGGTGGCCATCCA
CAGTCAACAACCATTGAATCATCTCATGTTTATTTCAATGTTGGAACACA
TTTGCGTCTTATACACACAAGATGAAAATGCTAGTGATGCACTTTTCAAA
AatGTTTGTGAAAAGCTCAAAAGTGGAATGttGATACCAGACCTTGCTTA
TTTGGACGACTTCAAAGCAGTAAGAATGAAATATCAAAGTGCACTCAAAA
GTCTCATGGAAGGTTCTGTTCAAACGTTACAGcccaaatttgaaCTACTC
AAAACTAAAGAACATCTCGCATTCAACAGTTCAGCTGTCAGTGGGTTCCA
TACACAGTCATTGTATAATGAAATGTTCTCCATGGAGGAACATATTGCAT
CAGGAGGCTTCGGAAAAGTTGTCAAAGCACAAAATAAACTGGACCATAAG
TTTTATGCCATCAAGAAAATCCCACTCGTTGATACAGATGTCAAAAAGAT
TCTACAGacattAAGGGAGGTGCAGATCTTTTCAAATTTGGAACACACAA
ATATTGTGCGTTACCATTCTTCATGGTTAGAGCATGGTGTCGAAACATTT
CTTCAAAAAGCAAATAATAGCTCCGACACATTCACAATTCTCGTCATCAA
ATTCGGTCAAATTGGTTCTATATCGGCATGTTTGGTCGATACACTTTGAT
GGGAGATAGGTATTTTCATAACTTTTCAACTCTAAGACGACAGCTTTCCA
TTCGCCTTCGACTTTCACCCATATCACAATGTCGGGACGGAGTTTTCTGC
CGTTAGAATTATCAGTAATGGTTGTTTGTGATTTTACGTGG
Run BLAST on NCBI

transcript from alignment at sc0000109:415525..432546+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010711 ID=TCONS_00010711|Name=TCONS_00010711|organism=Clytia hemisphaerica|type=transcript|length=17022bp|location=Sequence derived from alignment at sc0000109:415525..432546+ (Clytia hemisphaerica)
AATTGTTAAAAGGTTGGAAACGGAGACATGGTAAGCATTCTTCAGGAAAA AAAATAGAACAGGCAAAGAAAGTGCTGCATTCTTCTTTCTTGATAGGAAA ACTTACCTTTTTGACTGTTTGATTTTTAGTCAGTCTAATAATGAATCCAT TAGGTTTAcagttttccaattttatcaaatttcaatcatattcaataact ttttttcattgCCTTCATTCCATAAAATTATGAATCACGAATTTCATTGT AAGAAATCAAATGataccgtgaagttgggtaacttgcaccaggtcagtgg agggaaacttgcatagccatcaaacaGTGTaaacctaaagctctaaacca gcatctaataacatgaaaaccagaatatgattcttcaatgggaatcaaaa ctataaagtgcacttacaaacatcaatttgtcagaNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNtcgagaacgctccgcgaactcctgcgcgggtgaaaaacttca atctgtcaatcattttctcaagcgaagagtacgcaaagcgattctagctt tacgatagtgccgcgggtcatcaatggatagtattcaattgtcattatcc ctttattttcattcctagaacttttgcaaaaaaaaggaaaaatagaaaag ttgtattttttactgctccattcatatactgaatttgaaagatcttctat gtggcgtttttttgcaaacttcaaaaaactgatttttgtcccgcctttgc gggactttggcttaagtgcttaaGTGNgagtgcagcatagggtacaaagt ctaAACAtacgtttcccgtaatttttgtgtgaagagttaggtctacactg tcaaatgactgaccaatcaaaccAGACGTCTGCACTCGATaggatcatcg gaacggctcaaTGACGGATttatatgtgatcgatggattacttaacgatc cggatgggagatcgatagaggatcgatactccagattttttaagcttatg attagttatcgattatttatcgatctatcatcgatcttttatcgatctcg ATTTActatcgataacaaatcgattaacaatcaatgaccaatcgattaac gatcgatgacgaatcgattaacgatcgatgacgaatcaattaacgatcga tgacgaatcgatatactcgattgaaaggtgaaatactagctcgataatgg atcaacgaaggatcgatactcaagatcttccatcgatctcccatccggat cgttaaataatccatcaatcacatatcgatccgtcatcaagctgttccga tgatcgatcctatcgagcgcggacgtctggatcaaagcagcaaaatttca aaacaaatgaactacgcagctccgctcgcagctctactctaccatttttt NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaacgtacag accaaaataaacgtacaggggagagaataaaattggaattaataaacgta caggctgaaataaacgtacaggcgagaaatcagagctaaaataaatacac gtacaggctaaaataaacgtacagggaaaAATCtactatttttcaaaagt agaacaTCCAGGTCGAAATGACTGACTAAGTATAGGTATATCTCTTGTTA TAGATCAATGACAAGTACTAAATaagcaaaacgttcgaatttactCGTGT AACACTCGAAATTTCCCACGATACGTTCGAATGTTTGTAATTAACGGCCT TTCTACATAtcttacttgaacaaaaaataacaagttTTTGCAGTATGAAT GGGCGATATtgggtgaaaataaataaacatacagtagggaataaacgtac aggcaggaaaatttttcagaataaataaacgtacagttcctaataaggtg cgtacaggcgggaaatttgacacgaaaaaaaataaacgtacatgtacgtt tattaggcacccgagagtactcggcatcggtgcgaaagagaaatcgtgta ttttttaatacgtcgTTCATTATcacaaatcaaatgactttggaggttca gtgaaatggtggtcgaattgctgtcccatgttttgtcagatagtcccaag ttcagtcaaaaaaatattagatttgattctttttttggtcgtatttctaa attttacgataaaaagaactatttacaaattattttctttaacaggcgtt gaatcgacattgacatatttaatgatgtcataatcaatgctgTGCATATT TTTTCAGCgctgtgcatattttgtcaacatccttttcattggataaatac cactaaaatatacaagagaagtaaacataaatttatcgcccgcgagcacg gcttaaccaagtgcacctctcttattcattatctaagaattggaacgggc aaagattaccacgcggacaaaggttatttgaaaatatttttagttataat ccaaggtagaacaaactaaacatagaaagggggtattttttagtgctcta tacgatgatcggtattttttttgaattctatgtttagatttttctaccca gcacCGTTATGTACGCACGCcttgttgctaagacctttgatggaaatcga aagtgaaaccaaaataatttagcgcacACAGCCGTTCAcataatatcgat aaagtgaaaggagTTCCTGACtgaagttagagcagttgatggtaactttg tattttaatgaccagccaggtcattcatttgagggctatgcatattagcc tccaatgatgcaagttacctgatctcacggtagGTGTTCGATCACCAAAC CTGATCGAACAGTATATCGAACTTTACTGGAATATCTTCAGTTCGATTAA AGTTTGATCACTTTATCGCAGTTAGATTATTTAAAGTTCGATCAgtgttt ttgtagctcaaatggttccagTTATTGCTAGTGCAACAACTTTTGCCTAA ACAATCCCCAACAATCATTGGATTAGCAGAAAAGAGTTGTTCATGCGCTC TGAGAATGATTTGTGATCGAAAACCATAAATTGAACACGttgaacatcaa tcgaactaatcgaactttaccgGAATTTCTCGGTTCGATGAGTGTTAGAT TTAGTTTGGTAATCGAACACCTACCGTACGATTGAGTTTGATTtcttcgg taatcgaacagtttGATTGACATCGCCTGGCAGGGTATGCTTTaactcct atatcaagattacgggatttggaGTGCAGGCCAATTTTACTAtaattttc agtggtttcactttcgatttcaagccaacaacttagcaacagggtgctcg cccatagttacaggggtttgtgcaaaagaaccaaacatagaaagttttcc aaatccctatttcgattgaaccaataataaatgaaacttttccatgtttc acttttttgcaccaattcttcataATGAAAATAtctaagatttaaagttc tcctttatttaatgattttttacggcactttgttgacaatctaattctcg catcaaattcccactttcttcagtaaattgaagatcagaaaaaacctaag ccttaggatcacggattgaaacaaataggaagggtgggattttacagtcG TCTCtagtgcaaggcactgagaggccacaggtgccaaaaagaagggccat gTGAAATgcggcaatctcattggtggaaatttgataaacagctgcgaagg agcgctgggaagcaatctgtagaagagaccactttcgtttttgttgcaga tttcgatataaacttctctcacagggattacttgtcaatatGTTGTGtga acttgtcagcattgtattgttgtaaagggaaagataaaagaggtaagact agcctagtttctaatcctgataaaggagtttaagtttagactgatagaca aaagatttattCCTCTCTAgtcactaagcaaagaaaaatagttttaatcA GTGATTCCCAAACTTCCCATTATTCCTATCTTTATATGATATCTGATGAT TCAGACAACAAAGTCAAGTACTCTCTGGTACCTAATAGCCCCcctccgct tattaagttttgagattttttccaaacctcccgcttattccaaactcccc ggctattaggtacccaagagtagcTCCTCAAATGAAGAACAATCCGAGGA AGAAGTCATTCTTCCGAGGAAGAAGTCATTCTTCCATACTAGCTAGATCA ATACCTTCAATCGAGAATTTACAAGGCAGAAAATAGAAGAGGTATTTCGG ACCCCATTGAATGTTTaatcagttaggaacatttggcgagttcctgtacg cggccgcaatcaaaaaaatcataaccacactcataaaaaaattgtgtttg tgtctttttttaccGNNNAAAATTTCctcaactttcaacaatgataaaac acacctatttaaaaaaaaattaaccagcgcatttttcatctttctacttc ttcatcttccatgaagctctcaaagttaaatagaattaagcacataagat attcttataattgtgaaatgttGTTCGCGTTTTCgctacggtggagtgca tgacgtaactcgcgcggcaacaaactcgccttctgttggctggTCATATT GgccgttttggcgttaccaccctcgaagcagtGGGCGCCTTCGTCATTcc gcaactctgtccaccattttaaatgagttaacaatggatccaaaagggcg ccctcatcaagaaagatcatttgctttggtctccggctttgggaagcagt aatgttttcgattgttttcgatggaaaatagtaagaaacttaagtttaca agtgtcattcagtttttgctggctgatagaatggcaggatcctggatggt ttccctaactgttaATCGGTATGATATCTTCTTTTTACTCACCGAGTTCA GGAACTCAAATACAGTAGGCATTTTTGCAAGTTGATtaggctgggcttaa aaaaattgttggtttgccgtcacccacCCTTAGATTTTCGAGGTGGGTCG GTCAGTcggaacttttttttattttggcgatttttaaaatttttatccat ggaagggttaacagtttgtttacatttaggtaattttgaataaaaaacag aagtgctagcaggaaatttacgattcttatgcttgagacaaacaagatac gagttttgattttttattgtttgaagtttttaaaggaaagaaaatcttct ttaaaatagcaataaattttttgggtcagcaggtttcgaggtagggttgg tcgggtgacggcaaaccaacaattttttaagtccagccttatgaaatgaa agaaacgtaAGAATTTATCAGTACCCATTTAGTAGAAAGTTATACACCTT ACACAATTTTTCTCCTTGAATATTTCATCCTCGCTGGTTTCAAATCTGTG TTTAGACTTTTGTAAATGTAGATCAAAAGTTCAGCCCATGGAATGGAAGT AGAGTTGTAAATACCAGTCAAACATATGACACAATTTAGCATTTATGAGT CATCTTTAATAATATCATAATATCTTGGTTGGACAACCTCTACTTCGTAG AGCGAATCATAGATTATATCTTTCGAAAATTCACAAGGTTAAAAATACAT tacttaaagtttcatgcttatcgcaatcatcagatgtgtaaaaacatttt tttaaaaaaccgtCTTATGTACAGATTTGAAGTGtggaaaaaatcgtaaa aaaatcgtaaaaatgattaaaagcaattatgacaaattaggtgataaaaa tgattaaaagcaATTATGACAAATATGAGTCATCTTTACGCGTCATCAAC ATAGATTGACGGCTAAAAAGACCAATACAAAATACATCAGAAATGGTACA AATACTAGTGTCACGTGATGAAATGTGGAAAGCCACTATGCACATATTGT GCATTTTCAAACGAAATACGAAACCAGACAAACGAACGGGGTCTTTCAAA CTGCCTCTGATCGAGGTGGGTTCTCCCTGTTAGGGGAGATTTATTGTTTG ACACCGAAGTATACATGTAAACTGACGCTTATGAAGCGTGACGAATTAAA TGAAGCAGAGACTCCGCAGAGCCAACTGCGGAGGGTTATTGTGAAATGGT ACTGACGAAATGAAGCAGAGTCTCCGCTGAGCCAACAGCGGAGGGTAAAT GTTAAATGGCAGAAACGAACTATGGACTGATTTAATTACAGAGACTTTAC TACGTAGATTTTATggttatttattttattgaataattGATGCATCAAAC TTAAACCTTGCTACTACTCGTGCTTTGAATTCTATAATACCTAACCGGTT CTCTTCCAATAATAGCTTGGGATCCTGAACTAGTCGGGGAACAAATATAA ATATTGCTGTTGAGGATAATTGTCGGGAGTTACTTATTGAGCCGTAGCGG CCCGCCCGTGACACTAGGTAAAACAGTTTATTAAGATACAAAATGAGTCa ataatagaaatagaaaactgTAGAATTATTACAAAGCAGAAGGAAAAGTA TAACATAAATACAGAAGATACTCACTAAAGAACACTGTTTTGGAACATCA CAAACATTTAACATTTAAACATTGCACCACAAGACTGAACAGTTATAACA TTTACAGAATACACAGAAATTCCCGTAGGGATCATAGTACAATACAATAA TATATAAACATTACACTATAAAAAGTAAACCTAATACACATGAGACATAA TAAATGACATAAAGGAAACAATTATAAGAAATCTAACTACAAAAGACCAA TTAAATACAAAGTAATAATTGTAAGAACATCAAACAGTTACACAAAAGAA CAAACATAAAATCAATGCCAAAACGGCATTAACACTGTTAAAACGGTATC TCAGAATGATGCAGATAAAATTTATGATTCTCTTTATTTTGTAGAAAATC attataaataaacaaaaatcatgCACCACAATGTCTTTTGATGATCCTTT CAATTTATCAACAAGTTTCTCTTCTTTTCAACGTGAAGACTTCAATACAG CATCATCAGCATCTTCAGATGATTTTGTCGAATTTGAGCGATTCACAANC GAACCTGGATTATTTTTTCGTACACGTCAATTAgagtttttctaggaaaa ttgaaaaagaaaatattttccggccgcccgggtgagattttttttcgtca cccgcatTTCTGGAaacaaaacaacttttttatttGGCCTCGACATAGAT TGACGGCTAAAAAGAACAATACAAAATACATCAGAAATGGTACAAATACA GGTAAAACAGTTTATTTAAGATACAAAATGAGTCaataatagaaatagaa aactgTAGAATTATTACAAAGCAGAAGGAAAAGTATAACATAAATACAGA AGATACTCACTAAAGAACACTGTGTTGGAANAGTGGAAGCCTATTGATGT TCCCTTTTTGCTACTTtgatgggataaattttcgtggagattaaattttg cagatgaGCCTATCCGCgaaaaaaggtaattttgaaaagattttgtgGGG actcaaaaagtatgcaaaacaaactactttaatgggataaagttttgcgg ggattaaatttcgcggatttcgcagattagggtgtcatccgcgaaattaa gtcccaatggaaatttggaagggctgTCGCGGACGGGGAGGACTTGAATG TACAATGGAATTCAGAGTGACAGTAGAACAAAGTAGACAAGAGTTTTTCA GCTCGTGCATATTTATTTCAATCCAtccaaataataaagtaaagttacac acaataaacaaacaaatttaaatgTCAATGATTCACCTGCGTCCAGGCGT CGCCGCTCACTGCAGTTTATTGCGACTTGGGTTTTATTGTTAACTCTGCG CGAGAACCCCATAACTCCGCAGTTTACTCCGTTTGATTCACCACCTGTCT CACCCAGGCACTTCCCAACCTTACGGTCCAGTCTCTAAACGACTCTGCTT CAGCATTCTTTGTGGATGCACATGGCAGTCAGACTGGGGTCAACGGGGTC CAATTGTGGAACCAGGCTAACCTAGGTCTGATGGCCACGCAATCCGTGAT TCCTCAATACGTCTTGTCCGGACAAACGCTTGCTGAAGAATGTCTGAATT TCTATATCTGGTTGAGATATTTCTATCTCATGCATAATGCATATTTACAA ACATTCAACAAACAAAATTCTATTTATAAATCCCTCATGACAGCAGCCGC GGGCCCAAAACGTTTGGACCCCAAACGACTACCCCTTACTAGTTCTAACT TtaaaataacatcaaatttttattttgacaaaatctcACAAAAAGGGTta atatatttcaattctacccaaatatttatatatttatttcaTTCGACAAC ACACCCATCTTTACACAGAGTATCCATTTCGTTAAATGATTTTTACTTTT GGTAGAAGACCCAAGCATCTGATCTCATTTGAGTTCAggttacaattttt ttcacgGTGTCCGTCTCTGCCACAGGTCCAACAGGTCAAGCCACGCTCCC TGTTACATGGGATGATTTTACAAAAGTTCTTTTTGTGTCCAGATTCACCA CATCTCCAACAAGTTAATGAAACATTCTCATTTGTGCCATTTTGATACTT TAATAGGTTGATTTCAATGTCATCTTCGTCGTCATTTGCTGACTTCGGCT TTCCATTCATCATCCGTTCTATGGCATTCAGTTTCTCCCATATCTTGGTG AGTTCCAAAGGCTTTTCTCGCTTCAAGGACTCTTTTAGCTTGACGGCCTT CACTGCTTCGTTGTAGGTCTTAAATTGTTTAAGACAGACAAAGTCTTGCA AGTCAGGTCTTAATCCAGCCAATAAGAAATCGAGTTGTCGATTCTCTGGT ACTTCAAGTTCAGTAAAGAGGAACTCTAATTCCTCAAGGTAAGTAAGTAA GGACGAATCTCCCTGCTTGATGCTTGCGTCTTCTAATAACTTTTTCCTCT GGGGCATCAAACATACTTTCAATTTCCATAATTGCTAAGGCAAAAGAGGT CTTGTAGGTTCCATCCATCCGGTGGAAGAACATCTTTGGTCTTTTTTGTA ATATGGATGGAAGAGCAGCCAGTTTTTCCTCTTCAGTCCATTTACCAAGT TTTGTAATGTCTTCAAATTCTTTTAAGAAGGTTTTGAATGACTTCGATCC GGTCCCATCAAAAGTAGGTAGATCTAAGTGAGTGATCTTCGGTCGGCTGA GTTTATTTAAAGACTCTACAAACGATGTCTCTGTTAGAAATGTCTGCTGC TGTATTGGCTTTCGGTCTTTTCGTATAAATGGTTCACAGTTACCTCCGAT TGCTCCTGCTTGATATGGAGGGGATTCAGATTCTAAGTGTTCAACTCGAA ATCTTAGCTGTTCAATCTCCTCACTGAGCTGTTTCCCATCGGATCGAATT CTGTCTCGTTCACTCTCCAATAGTTCTTGGTATTCGCATGGCGCACTCTT CCTTCTTTGGATATGTCGCTTGTCCACAAACGGTGGTGTAGTGCATCCAT CGTAACAATTGCTACTAAACATGCTGTTCCAAATGTCCGATTGAACACCA CAGTCACTATGGTAGTGATTGGTGGTGTNTAATTGCTACAAAACATGCTG TTCCAAATGTCCGATTGAACACCACAGTCACTATGGTAGTGTTTCGGTGG TGTTAGAAAGGCTCGTTACTACAGGTTCGCAGTACTTGCAGTTGATTGAT CCATTTACAACCGCAGGCAAGTAAGGCAGAACTGTTAGTAATCACTATAA GGTATGTTGGAAAGAGGCGTGACCTTTTTCGATGAGCTTTTCAGCTTTCT CTCCTCATtgactttcttctcttttttttccgtTAAAATTTCTTGCATTC GGTATTTAGCATCATTACTTGCGTCAATGATAAATTATTCAAGAAGGTAT ATAAACGATTATTGCATCTTCTGCCTTGAATTATTGATTACTTGATGGTT CATCGCGAGAACTTTTCGGAGTTGGCTTGATATCAATAATTCAGTTCATT AATCCTCAGAGTGACAAATGTTTTCGATGTTTCATATGTTCGAAATGACT CAGCTGTTTAGTCTAAATTAACGACTCATTCTCAATAATAACCATTGAAG TTCATGGTAAATGATAGAACGTAGATTTGAGTTTCTTTGAGTGAGTTTAA TTTCAATAATTCATTAATCTTGGTTAGGTATTCTTGATGTTCTTGCGTGT TCGAGCTAAGATGACTCAGATTTCGGTACCATTGAATGACTCACTTTTCA ATTTAATCATTCAAGCTCTCAGATGAATGATCGAATCAACCACCCGTGTC CATTCAGTGCCAATGACTAATAGTTCATTAATAATTTGATACATTGTTTA TTACAGTAAACCTTCGACGTCATTAGTTTTGTGAGTCAGCTCTTTCGACT TCAAGAAAGTCTGTCGGATTGTATTCTGCATGtaatttaaccctattagc cccaagcttttttgacttttgtatccccaggggggggtagaatctaccac cctcgattatttttgatctaggaGAGCTACGGTCATGAAANNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNCTTCAGCATTCTTTGTGGATGCGCATGGCAGTCAGACC GGGGTCAACGGGGTCCACTTGTGGAACCAGGCTAACCTAGGTCTGATGGC CACGCAATCCGTCAATCCTCAATACGTCTTGTCCGGACGAACGCTCGCTG AAGAATGTCTGAATTTCTATATCTGGTTGAGATATTTCTATCTCATGCAT AATGCATATTTACAAACATTCAACAAACAAAATTCTATTTATAAATCCCT CATGACagggccttttccgcgaaatatttctaaacaaaactcaaaatatg tcagaTAAATACTGTTtaaatggttacttgcatcaaagaagcgctaacaa tgtgtatttcaacaaccaacatgcacgatttggcagtaaaagccacaaaa tcgtgaaaatattgccactcaatagtgccacccgcaaaattaagtccccg tgaaattgaatttcgcggataggcccaactgcgaaatttaatcctcgcga aagtttatcccattaaagtaatctTTCAGTACAAGTTCAAGttagaaaca aaagaaagaaacaacaGGCTTCCAtacctttttctaattttttgactGGG TTAGTACAggcacccctgtgtcacagaccaaAAACTTTGTCCCAAGTATG AAAAATACCCTAGATTTTTGTTGGATCCTGATTTTGCTTTGGATCAACCT TTAAACTTGCGAAAAAGGGAAAGTCAACTATGATACATTAGATGTTTTCT TTTGCCTACAGTAGAACGGAACAtgaaattctattttcaaaCTTAACTCT TGaaagtaccttaaaggaagaaattttgtcaggaatttaatttagcagat gaaaaatttgttttaaggcctgaaatcaCACACATTCAGGAGAATAAATA CAGTAATGGCAGGAAcctaatttggcggattttgactAAAtctgccaaat ccgccaaattttctttccctaAAATTTCTTACCTTTTAAAGTAGAAGAAA ATTAAATGAGATTTTTCTTATGGTGTTTTTTGTACAAAGGTATAATGAAa agataaatttcttttttttttaagatgaagaAAGCCAATCACCATTTTCA CAATCCAGCTTTGGGGCAGCATCTAATAACGAGGTGGCCATCCACAGTCA ACAACCATTGAATCATCTCATGTTTATTTCAATGTTGGAACACATTTGCG TCTTATACACACAAGATGAAAATGCTAGTGATGCACTTTTCAAAAGTATG CAGTTGAAATTTTGATACACTTAATTTCtcctttatttaatttttcacaa gaaatattttataggAATTTCTTTAGTAGCTCTAGATATTGATATGATTG AGCCAAAACCCTTTAGTGTCATCAATCTCTTCCATAAAAATGGAGAAGGT TAGAAGATTACAAAATATAAGAAATTCTTAGGCCTTTGGGTAAATTTTAA AATGCTTCAATGGTCAAGAAACAAGAGTGTgattatttgacaaaaattat atCTTCCAACCTTTGAAAGACTCAagtcctgtttttttttaagctttact tttcatatgaaatttatttaataatgtttttgttctttttttcattattt tagatGTTTGTGAAAAGCTCAAAAGTGGAATGGTAATTATATTCAATTTA TTACAACACttatttcttataagaattaTTTCTAAAAGGATATTATTGtt agaaaaaattcaagatcaGAAAGATATATATGTGTATCATCACCAAAACC TATGCTTTTCAGGGAATTTCTGATTGtggatttcaaaatattactgGTGC TAATTCGTCAccagaaaaattaaataatatcAGATATCAACTCTAGTGGC TTATTTATAATGACTGACTTATCATGATATTAAATAAAACCgctttttat ttcttagttGATACCAGACCTTGCTTATTTGGACGACTTCAAAGCAGTAA GAATGAAATATCAAAGTGCACTCAAAAGTCTCATGGAAGGTTCTGTTCAA ACGTTACAGGTGATTTTTCGTTTAATGTTTATACCTTCAagattatcttt tttttaatctaataTCTTGGTTTATTAAGTTTATACAGCCCCTTTTCACA GCCCCTTTTCAcaaacccggtaggattttttcagccagtggggataaaat taaaggactaaaactcgatggggattgatgtCCCCATATttcttatggct ggggatttcaattctcttgttttcaagtcagaaaattcagtctGGATGGG AacaatagtaaatattttgaagtgaGGATaggtttttttaattgttttca gtgggggcaaaaattggaggataatttttcaccggggacgatattttggc tgatttttccagtggttctgtgagaagggggtgtgtttATTCTAAATGTT TTAAAGAATTTAGGCTTTTAATAATTAATtaatatgtttttctttctttc tggtATGGTACCAGGTTTGACTTgtcagaaaatatttaaaaattttatac CAATTTCGTCCAAGTTACGGCTTTTTGGGTAACCACTGCCGTGTTTGACT GAGTGAGtgtaatgaaaaatataaacatcaatttttagcccaaatttgaa CTACTCAAAACTAAAGAACATCTCGCATTCAACAGGTACGAAAAGAACAA ATCCTTTTTCATtggaaaacttaaaaaaaacttaaattttgatgggtttt tTATTCAGATTTGGTTTTTATTTATACTTtaaggtgccaaataaacgggg gggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggcgtttatttggc acctaagagtactatTAGAAAGTGTtcgaaaatgttaaaaaaatttatgg GCATTCAAATGTCCAAAATCtattcatttttctttgcaGTTCAGCTGTCA GTGGGTTCCATACACAGTCATTGTATAATGAAATGTTCTCCATGGAGGAA CATATTGCATCAGGAGGCTTCGGAAAAGTTGTCAAAGCACAAAATAAACT GGACCATAAGTTTTATGCCATCAAGAAAATCCCACTCGTTGATACAGATG TCAAAAAGATTCTACAGGTTAGCTTTGGGCTTTTCCacaaatagtccgtg cccccaccccctgttgaggatattggacAGCCAGGGGGCTCAATGCTttc tggatatccagggggtaagacCTTTTAAGAGGGAGAGGATATCCAGAGGG TTCAATGCTTTCTGGATATCCTTCTATCCACTTTTTCAGGTCGAATAAAC AGGGGGTCTTTATTTTTAAGCTATACATCCAGGGGGTTTTGGAACTCGAA AAATGGATATCCTCAACAGAGGGAGTGGTACAAAAAAATTCTGGAAAAGC CCGCCATTCACCAATCAAGTTGATGAGCTTTTTGTCAATCGTTTTTTGTA GAAAAGATTATAGTAGACATCATTcgagcgaaaaaataaaaaaaaaaaac atttttaaaaccgttacgtcagatttgcccaatagaattacttcattttt caaccaaccaatgaccttaaggccggtcttcactttcgcacgaaatgggc gacagtttttttcttaaccctTTTTGCCTGAGGAAAAGTTTCTAttcgtt acgtcaatttcgaccaatggaattgcttcattttccaaccgaccaatgac cNACGTCATacaaaagtttcgcgcgaacaaaaaaaagtttccattcgtta cgtcaatttcgaccaatggaattgcttcatttttcaaccgactaatgacc ttacaaaaacgtttaaaaaagttttcgctcattttgCGCGAAAgtagaga ccggcctttagttAGTCCACCCAATCGTTATAAACCCTGGAAGATCTAAA AGCTGTGCTTCCCGTTCTGATTTATCAAATGTGGTTGCAACATCGAAAGT AATTCATGATATacatcattgcaatgtcttctgacattacaccACGggcc caatagctgattggttttaagtgacgtaaaatcactTAAAGTGTATCCAG ATGCCCCTTGGTGGCACTTTTCTGTGAGACaccaaatcttcaaattttta ctaaaaacgggggttatgttatcttttctGAACAGtgcaaccaaaaatac attcaaatatagcgcttttgattctctaaaacaagcaaaagatTTTTTGC AATTATAtcggactatcaaaagttacaggcattcttttttccactgccaa ttatatctggatataCTTTAATACgtcattttcaaccaatcagctgttgg ggcCATGGAACaggaagacattgtaatggtggatatcatgaattgccatt tctgttttatttttcagacattAAGGGAGGTGCAGATCTTTTCAAATTTG GAACACACAAATATTGTGCGTTACCATTCTTCATGGTTAGAGCATGGTGT CGAAACATTTCTTCAAAAAGGTGAGAAGAAATGTTCTTTAATCTAATATA CTCTTCTTACACGTtatattataagaacatctaaaatatgttcttaactt tgagCCTAAAAATTATCTTAACAACTTATTTTCACTactttgttagtatt tttatgCATATTTTTCTAATAAATCGTCCGCAAGGCCTTacgttcttagc ttgttcttgatatttttgccATCAAAGCCTTCTTATAtggttttttctta taaaaaaaatgtgtacgcAGTGTGTGGAACAggtttgaaaaattctttgc atgccataatttgaaattttaggaTGATATTTGATTTGgaggattttatt ttctataaaatctgttttcttttttcctaaCTGTGAAAAACAAGTAAGTT CGGAGTTAAtggaatttttcttcaaattttatgCCTTGTCTCAGCTGGTC TCCGTAAAAGAAATACTTAATTAAACTGAATTAAAATTTCGTCGggatac aaaacaaaaagagTACATCTTAGATTAGCACaatttttagaattaaaaaG TAAGATCGTTCATGTCGAGTTCTTCAAAAACTAATTGGTGTCTTGTTAAT TGACTCGTGTGATTAATTTGATTTATGGTTCTCAATTCTTTCTCATCATG TCCATGGCAGTACTCATAATATGGTAAATATTTGCctcataatttttatt tttggggtctggttcaaaggttcttattttcacatCCTTTACAAATGCAT GTTTTTTAAAAGCCTCAgacatttttgttgtttctctGCAGCAAATAATA GCTCCGACACATTCACAATTCTCGTCATCAAATTCGGTCAAATTGGTTCT ATATCGGCATGTTTGGTCGATACACTTTGATGGGAGATAGGTATTTTCAT AACTTTTCAACTCTAAGACGACAGCTTTCCATTCGCCTTCGACTTTCACC CATATCACAATGTCGGGACGGAGTTTTCTGCCGTTAGAATTATCAGTAAT GGTTGTTTGTGATTTTACGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006006XLOC_006006Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010711-exon-sc0000109-1491911889:415525..415554TCONS_00010711-exon-sc0000109-1491911889:415525..415554Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1510915933:415525..415554TCONS_00010711-exon-sc0000109-1510915933:415525..415554Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1575043694:415525..415554TCONS_00010711-exon-sc0000109-1575043694:415525..415554Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1491911889:427799..427969TCONS_00010711-exon-sc0000109-1491911889:427799..427969Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1510915933:427799..427969TCONS_00010711-exon-sc0000109-1510915933:427799..427969Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1575043694:427799..427969TCONS_00010711-exon-sc0000109-1575043694:427799..427969Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1491911889:428328..428356TCONS_00010711-exon-sc0000109-1491911889:428328..428356Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1510915933:428328..428356TCONS_00010711-exon-sc0000109-1510915933:428328..428356Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1575043694:428328..428356TCONS_00010711-exon-sc0000109-1575043694:428328..428356Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1491911889:428632..428733TCONS_00010711-exon-sc0000109-1491911889:428632..428733Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1510915933:428632..428733TCONS_00010711-exon-sc0000109-1510915933:428632..428733Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1575043694:428632..428733TCONS_00010711-exon-sc0000109-1575043694:428632..428733Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1491911889:429313..429359TCONS_00010711-exon-sc0000109-1491911889:429313..429359Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1510915933:429313..429359TCONS_00010711-exon-sc0000109-1510915933:429313..429359Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1575043694:429313..429359TCONS_00010711-exon-sc0000109-1575043694:429313..429359Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1491911889:430014..430191TCONS_00010711-exon-sc0000109-1491911889:430014..430191Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1510915933:430014..430191TCONS_00010711-exon-sc0000109-1510915933:430014..430191Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1575043694:430014..430191TCONS_00010711-exon-sc0000109-1575043694:430014..430191Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1491911889:431442..431544TCONS_00010711-exon-sc0000109-1491911889:431442..431544Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1510915933:431442..431544TCONS_00010711-exon-sc0000109-1510915933:431442..431544Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1575043694:431442..431544TCONS_00010711-exon-sc0000109-1575043694:431442..431544Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1491911889:432316..432546TCONS_00010711-exon-sc0000109-1491911889:432316..432546Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1510915933:432316..432546TCONS_00010711-exon-sc0000109-1510915933:432316..432546Clytia hemisphaericaexon
TCONS_00010711-exon-sc0000109-1575043694:432316..432546TCONS_00010711-exon-sc0000109-1575043694:432316..432546Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000109supercontigsc0000109:415525..432546 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.666076 2.0162 0.713892 0.297504 1.67508 1.43118 1.23291 0.891386 3.09881 4.51312 1.65783 2.4423 2.99194 2.36945 3.02651 0.668404 1.31076 3.05856 0.317731 1.53976 1.91502 1.36367 0.623622 1.18074 2.23201 2.8401 0 0 0.213777 0
Blast
BLAST of TCONS_00010711 vs. Swiss-Prot (Human)
Match: E2AK1 (Eukaryotic translation initiation factor 2-alpha kinase 1 OS=Homo sapiens GN=EIF2AK1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.045e-16
Identity = 46/153 (30.07%), Postives = 82/153 (53.59%), Query Frame = 3
Query:  183 SDALFKNVCEKLKSGMLIPDLAYLDDFKAVRMKYQSALKSLMEGSVQTLQ--PKFELLKTKEHLAFNSSAVSGFHTQSLYNEMFSMEEHIASGGFGKVVKAQNKLDHKFYAIKKIPLVDTDVKKILQTLREVQIFSNLEHTNIVRYHSSWLEH 635
            S  +FK +C+      L+      D+F ++R+ +  A+  LM  + + ++  P  ++ + ++     S  V+     S Y   F     +  GG+G+V K +NKLD ++YAIKKI +        ++ LREV++ + L+H NIV YH++W+EH
Sbjct:   87 SRQVFKLLCQTFIKMGLLSSFTCSDEFSSLRLHHNRAITHLMRSAKERVRQDPCEDISRIQK---IRSREVALEAQTSRYLNEFEELAILGKGGYGRVYKVRNKLDGQYYAIKKILIKGATKTVCMKVLREVKVLAGLQHPNIVGYHTAWIEH 236          
The following BLAST results are available for this feature:
BLAST of TCONS_00010711 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
E2AK11.045e-1630.07Eukaryotic translation initiation factor 2-alpha k... [more]
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