TCONS_00010664 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010664
Unique NameTCONS_00010664
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010664 ID=TCONS_00010664|Name=TCONS_00010664|organism=Clytia hemisphaerica|type=transcript|length=298bp
tttttatctagctggatatttttgctttttagaTGGGATAGGTATTTTAA
ACCTTCTGAAAcgtaattaaaaaattgagtactTTTCTAGCCAATTTAGC
GGTccaaaagtcataaaattttcagaccatttGGCCCCAACCAAGGGCGG
GGCCTACAGGTGACACATACACTTTTGAAAATCTCCAATTTTGTGTTTTC
CGTCTCACACGAAAAGAAGCACTGTGAATACTGTTCTATTCTATGTCTGT
AAAATTACGACTGTCTGATTCAGACACCTACTCTCAGGTTCCTAATAG
Run BLAST on NCBI

transcript from alignment at sc0000108:114809..115106

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010664 ID=TCONS_00010664|Name=TCONS_00010664|organism=Clytia hemisphaerica|type=transcript|length=298bp|location=Sequence derived from alignment at sc0000108:114809..115106 (Clytia hemisphaerica)
CTATTAGGAACCTGAGAGTAGGTGTCTGAATCAGACAGTCGTAATTTTAC
AGACATAGAATAGAACAGTATTCACAGTGCTTCTTTTCGTGTGAGACGGA
AAACACAAAATTGGAGATTTTCAAAAGTGTATGTGTCACCTGTAGGCCCC
GCCCTTGGTTGGGGCCaaatggtctgaaaattttatgacttttggACCGC
TAAATTGGCTAGAAAagtactcaattttttaattacgTTTCAGAAGGTTT
AAAATACCTATCCCAtctaaaaagcaaaaatatccagctagataaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005976XLOC_005976Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010664-exon-sc0000108-1491911889:114809..115106TCONS_00010664-exon-sc0000108-1491911889:114809..115106Clytia hemisphaericaexon
TCONS_00010664-exon-sc0000108-1510915933:114809..115106TCONS_00010664-exon-sc0000108-1510915933:114809..115106Clytia hemisphaericaexon
TCONS_00010664-exon-sc0000108-1575043694:114809..115106TCONS_00010664-exon-sc0000108-1575043694:114809..115106Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000108supercontigsc0000108:114809..115106 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.5522	1.35169	0	0	0.848118	2.04644	1.43689	3.01799	0.415364	3.2253	3.18028	1.05862	2.47362	1.80769	0.242491	0.597458	1.83712	3.38412	2.65592	3.84747	2.25199	0	1.24443	4.6997	2.28784	0.545649	0.582331	0.441678	0.45
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010664 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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