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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010607 ID=TCONS_00010607|Name=TCONS_00010607|organism=Clytia hemisphaerica|type=transcript|length=1063bp
cgctaaacgctatgttttctgactgattttttttcatttttctccttgca
ttgctatctaactttcatcatcaggtaggtccattcagcatatagcTTGT
TTCGTTTGTTGTATATAGTTTTAAATAACTCTAATTAGATATATTAAAGT
ATGTCTACTCATGCTTTGTATAATGATAATGAATTTCAAAACCCTAGTTT
CCGATTCCCCAATTTTTAGGATAAATGGGGTCTGGTAACTATAGCTGTAA
ATAGGCAAAACTACTAACCAGATTTTGTCTTgctcctcttggtagagata
TCTCAGGGTATTTCTCTCGCATATGTAAATGGACTTgtcattatttcaaa
atttcaagtccgACTGATTTTCCTTCGATACATAACACAGTTTGTTTAAG
GAAATTTAAGACAAGGAAAGCATTGTATGGTTATAATATGAAACCTGCAA
ATGTCTTTCAGAATGGCTCTTTTAGTAACACCTTCCATTCCTTCATTCCC
CTACCATGGTgtatatgtatttttttaatgataaatACTTCATCTTCCCT
TATTAAAAAGGGTCTCCCCCTCTTAACACACCTGATCCACTCTTTTCGGA
TTCGGGTTGACCTGGGCTGAGTGACGTCTAAATATCTTTTTTGCAAGTGT
ATCGTTCAACCCTGGCAACCTAACCCTCTTTTTCGACGTGAGGATACTGA
TCTAAAGAAAAAGGTGTCACTAAGAATCGAAggaattaagatttttttta
gatttttcatgCATCAACATATATTTGGATTTATATAAGTTATGATACGG
ATATATAATAAGTAGgaaaatcattgatttttctttctaatatgtttctt
tcttttttcaaactaaCCAATATCAAAGATTTTACCCATGTACCCTACAA
AATATCCTTTATCCCTATGTACAATCCTCTTTAAAGTAGGAGCCCCTTTG
AAAAAAGCAAGAACAAGATTTTTTATACAGAATTGATTTATCTTTTACAA
TCCTAAGAtacattatgattttttttggtatttttaattttcttgaaagA
AATATCTCCAAAG Run BLAST on NCBI transcript from alignment at sc0000107:478475..479537 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010607 ID=TCONS_00010607|Name=TCONS_00010607|organism=Clytia hemisphaerica|type=transcript|length=1063bp|location=Sequence derived from alignment at sc0000107:478475..479537 (Clytia hemisphaerica)
CTTTGGAGATATTTctttcaagaaaattaaaaataccaaaaaaaatcata
atgtaTCTTAGGATTGTAAAAGATAAATCAATTCTGTATAAAAAATCTTG
TTCTTGCTTTTTTCAAAGGGGCTCCTACTTTAAAGAGGATTGTACATAGG
GATAAAGGATATTTTGTAGGGTACATGGGTAAAATCTTTGATATTGGtta
gtttgaaaaaagaaagaaacatattagaaagaaaaatcaatgattttcCT
ACTTATTATATATCCGTATCATAACTTATATAAATCCAAATATATGTTGA
TGcatgaaaaatctaaaaaaaatcttaattccTTCGATTCTTAGTGACAC
CTTTTTCTTTAGATCAGTATCCTCACGTCGAAAAAGAGGGTTAGGTTGCC
AGGGTTGAACGATACACTTGCAAAAAAGATATTTAGACGTCACTCAGCCC
AGGTCAACCCGAATCCGAAAAGAGTGGATCAGGTGTGTTAAGAGGGGGAG
ACCCTTTTTAATAAGGGAAGATGAAGTatttatcattaaaaaaatacata
tacACCATGGTAGGGGAATGAAGGAATGGAAGGTGTTACTAAAAGAGCCA
TTCTGAAAGACATTTGCAGGTTTCATATTATAACCATACAATGCTTTCCT
TGTCTTAAATTTCCTTAAACAAACTGTGTTATGTATCGAAGGAAAATCAG
TcggacttgaaattttgaaataatgacAAGTCCATTTACATATGCGAGAG
AAATACCCTGAGAtatctctaccaagaggagcAAGACAAAATCTGGTTAG
TAGTTTTGCCTATTTACAGCTATAGTTACCAGACCCCATTTATCCTAAAA
ATTGGGGAATCGGAAACTAGGGTTTTGAAATTCATTATCATTATACAAAG
CATGAGTAGACATACTTTAATATATCTAATTAGAGTTATTTAAAACTATA
TACAACAAACGAAACAAgctatatgctgaatggacctacctgatgatgaa
agttagatagcaatgcaaggagaaaaatgaaaaaaaatcagtcagaaaac
atagcgtttagcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010607-exon-sc0000107-1491911889:478475..479537 | TCONS_00010607-exon-sc0000107-1491911889:478475..479537 | Clytia hemisphaerica | exon |
| TCONS_00010607-exon-sc0000107-1510915933:478475..479537 | TCONS_00010607-exon-sc0000107-1510915933:478475..479537 | Clytia hemisphaerica | exon |
| TCONS_00010607-exon-sc0000107-1575043694:478475..479537 | TCONS_00010607-exon-sc0000107-1575043694:478475..479537 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107 | supercontig | sc0000107:478475..479537 . |
Blast
The following BLAST results are available for this feature:
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