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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010512 ID=TCONS_00010512|Name=TCONS_00010512|organism=Clytia hemisphaerica|type=transcript|length=3070bp
GTGAATACAATAGAAATAAGAAATGATACTGAAGTAATGGCTCTTTATTA
TGTATTGTCATTGTTGGTTGTAGATTTTTCTCTCGTTCATGGTTTGGACT
TTGTACTCCCTTGTAAAGAAGATGGACCATTTTGTACTGGACctgttttg
gaaaaagttcAAATGAGTAGTATTTTTAATGATTCTAAACAGTTTGTGGA
TATGCCACTTAAACAGAATTGGACAAAATCTATAGAACAAGAAATTGTTA
ATGCGAAAAATGATGTTGAACTGAAACAAAAACTAGACCAATATTTTTAT
CCAGCTGGGACAAGAGAATGGCATAATGAAAATGTTACTTCAAAATATGA
CCTAAAGCTGATAGATCGAATCAAAGATAAACGCTATAAGAAATGGGCTA
AATTTCTTTGTCTTGAATGGAAGAAACTTGTACGCAAAATCAATCCAGAT
GTCAAAACAAATAGTCAGCGTTATTCAATGATTTATTTACGAGAGAAGCT
TGTCGTACCTGGGGGACGTTTCCGTGAAATGTATTACTGGGATACTTATT
GGTCTATTGAAGGCTTACTCCATTGTGAAATGTATGAAACGACTAAGAAT
ATTTTACAAGATTTATTACAAATGGTACAGCTTTATGGTTTTGTTCCAAA
CGGTGGCCGTAAATATTATGAGAATCGCAGTCAGCCACCGTTTCTGACAC
TTATGGTACTGAAATATTATGAAGCAACGAAAGACGCTAGTTTTGTTATA
AGGAATTACAAGACCTTGCTCAAAGAGCATGATTTTTGGATGCGAGAAAG
AGTTGTGAAAGTTACCAAAAATGGTACAATTTACACATTGAATCGATATT
TCAGTAAACTCGGATATCCAAGACCGGAATCTTTCAAGGAGGATAAAGAA
CTAGTAGAAGAGCACTACTCTGACCCTAAAGAAAGACAGCAGGTGTATTC
TCATATTGCTTCGGCAGCTGAGAGTGGATGGGATTTCTCTTCAAGGTGGT
TTAATAATAGTATATCAATGTCAACCATCAGAACTGCTAATATCATACCA
GTTGATTTGAACAGTATCTTATGTGCTGTAGAACTGGCGTTATCCTATCT
CATCAAGGAAGTTGTATTGGATCCTCTTATGGCTCTTAGTTTACACAAAA
ATGCTATGAATCGATATACTGCTATTAATGAGGTTCTATGGAATGAAGAA
AAAGGGATATGGTCGGACTATTTTATCCaagagaaaaaattgaattcgCA
TTTCTACGCGTCTGATATTTTCCCATTATGGATTGAACATTTTGATTCTG
AGCTACAGAAAAATAGTCGGAGAGATGAAGTCCATACGGCTTTAGAAAGA
TTAAATGTAATGTCTTACAAAGGTGGTTTTCCAACATCTAAAATCAACTC
TGGGCAACAGTGGGATTTCCCAAATGGTTGGGCACCTTTACAGCATATTA
CTGTCCATTCCTTAGACAACAATGCTTCCAACTCTCAACTGAAAGAAAGT
GGtagaaaaattgctcaaaattttcttgaaaactctTATTTAGCTTGGCA
GATAACTGGACACATGTTTGAAAAATACAATGTTGAAAGTAAAGGTAAGG
CAGGACACGGTGGGGAATATGCTATTCAGACAGGNGAGAAAACTGGACAC
ATGTTTGAAAAATACAATGTTGAAAGTAAAGGTAAGGCAGGACACGGTGG
GGAATATGCTATTCAGACAGGTTTTGGTTGGACCAACGGTGTTATACTGG
ACTTTCTACATAAATATGGTGATGTTTTAGAGTCGCCAGAAAGCATTAGT
AGTGATTCTTATACCATATCTCCCATCTTAATTAAAGGTCCTCTTTCGGT
GGGGAGATtgccttttgttttgtttggtgTCTCATATTTATTCATAGTAT
ACTTTTTTGTTTGGCAATGACGACACGGTCTATCTTTAAAACgatgaaac
ttgaaattagtaCTGCTTAGAGCTTGAGCTTTTGGAAAGCTTAAGATTTT
AAATAAGAATTTCGATTGAGGTGTCAAAATTATTGTTATGTCGAATTACA
CTTGAATGTGCTTACTCTAACAAACATTACTGGTGTATTAGCTCTAAcct
tttttgattcaaattttgatgattttgaactGATCAGGTGATTTTTCTTC
GATAATTcacaattttagttttaataATGTTTGTAGTTTAACTTTGATGA
TTCCATTTAATTTACTAACTCGTAAAGCTTTGTACTAAACTCGTTTCAAC
TAGAATGGCCAAGTTGGATCAGATCAGTTAACTATTTTGGTATGTAGCTA
AAATTTGTCTAGCTTTTTGGCTCACTGGTTTCATTGTCTTAAAGATAGAG
TGTTTTCAgattattttattgattttattccagatcattttacagatttt
tattcattttagtACTTTTACACTTCTTTTTATTAAGCTCAGGGTAAATT
TTCTTAGACCCTCAAAAACCATTTTTCGAGCCTTGAATATGCTTATGATA
TGCCTTTGTAAAATTTATCTTGCATGTTATGTATatagttttttttgtaa
tttatagGAGATTAAATGCTTTGAAATTTCGTTAACTGAGACTGAGGGCC
AGCATATGCTCCCaaatgtttaaaagttttacAAGAATTGAGCCTGGATA
TTATTATAAGTGTAATGCTTATATTATTATAAGTgtaatgcttataaata
aaaaacgttttttgaaaTAGGTTTATAGGGGATGTTTCACTGCAATGGAG
TGTATTGATTATTAGTTCATTGGTCGTATTAACCTAGTCGCTTGCCGATT
TCTAAATAACCTTATTAATCAAAAATCTGATAAAGAAGAGCTTGTGTGGT
TGTTTTGCtgaatttatttattacacgttttttttacaagaacatccaaa
atcgaaacttttggatgctcttaaccttttgagttttcagcctaaaaatg
ttcttaacatgttcttattttcccaatGTTGTggctattttcctaagaaa
tcggatgttttagagcctgcaaagccttaaaatgttcttaacttgttctt
gacattttggccatcgaagc Run BLAST on NCBI protein sequence of TCONS_00010512-protein >TCONS_00010512-protein ID=TCONS_00010512-protein|Name=TCONS_00010512-protein|organism=Clytia hemisphaerica|type=polypeptide|length=639bp
VNTIEIRNDTEVMALYYVLSLLVVDFSLVHGLDFVLPCKEDGPFCTGPVL
EKVQMSSIFNDSKQFVDMPLKQNWTKSIEQEIVNAKNDVELKQKLDQYFY
PAGTREWHNENVTSKYDLKLIDRIKDKRYKKWAKFLCLEWKKLVRKINPD
VKTNSQRYSMIYLREKLVVPGGRFREMYYWDTYWSIEGLLHCEMYETTKN
ILQDLLQMVQLYGFVPNGGRKYYENRSQPPFLTLMVLKYYEATKDASFVI
RNYKTLLKEHDFWMRERVVKVTKNGTIYTLNRYFSKLGYPRPESFKEDKE
LVEEHYSDPKERQQVYSHIASAAESGWDFSSRWFNNSISMSTIRTANIIP
VDLNSILCAVELALSYLIKEVVLDPLMALSLHKNAMNRYTAINEVLWNEE
KGIWSDYFIQEKKLNSHFYASDIFPLWIEHFDSELQKNSRRDEVHTALER
LNVMSYKGGFPTSKINSGQQWDFPNGWAPLQHITVHSLDNNASNSQLKES
GRKIAQNFLENSYLAWQITGHMFEKYNVESKGKAGHGGEYAIQTXEKTGH
MFEKYNVESKGKAGHGGEYAIQTGFGWTNGVILDFLHKYGDVLESPESIS
SDSYTISPILIKGPLSVGRLPFVLFGVSYLFIVYFFVWQ Run BLAST on NCBI transcript from alignment at sc0000107:179306..184254+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010512 ID=TCONS_00010512|Name=TCONS_00010512|organism=Clytia hemisphaerica|type=transcript|length=4949bp|location=Sequence derived from alignment at sc0000107:179306..184254+ (Clytia hemisphaerica)
GTGAATACAATAGAAATAAGAAATGATACTGAAGTAATGGCTCTTTATTA
TGTATTGTCATTGTTGGTTGTAGATTTTTCTCTCGTTCATGGTTTGGACT
TTGTACTCCCTTGTAAAGAAGATGGACCATTTTGTACTGGACctgttttg
gaaaaagttcAAATGAGTAGTATTTTTAATGATTCTAAACAGTTTGTGGA
TATGCCACTTAAACAGAATTGGACAAAATCTATAGAACAAGAAATTGTTA
ATGCGAAAAATGATGTTGAACTGAAACAAAAACTAGACCAATATTTTTAT
CCAGCTGGGACAAGAGAATGGCATAATGAAAATGTTACTTCAAAATATGA
CCTAAAGCTGATAGATCGAATCAAAGATAAACGCTATAAGAAATGGGCTA
AATTTCTTTGTCTTGAATGGAAGAAACTTGTACGCAAAATCAATCCAGAT
GTCAAAACAAATAGTCAGCGTTATTCAATGATTTATTTACGAGAGAAGCT
TGTCGTACCTGGGGGACGTTTCCGTGAAATGTATTACTGGGATACTTATT
GGTCTATTGAAGGCTTACTCCATTGTGAAATGTATGAAACGACTAAGAAT
ATTTTACAAGATTTATTACAAATGGTACAGCTTTATGGTTTTGTTCCAAA
CGGTGGCCGTAAATATTATGAGAATCGCAGTCAGCCACCGTTTCTGACAC
TTATGGTACTGAAATATTATGAAGCAACGAAAGACGCTAGTTTTGTTATA
AGGAATTACAAGACCTTGCTCAAAGAGCATGATTTTTGGATGCGAGAAAG
AGTTGTGAAAGTTACCAAAAATGGTACAATTTACACATTGAATCGATATT
TCAGTAAACTCGGATATCCAAGACCGGAATCTTTCAAGGAGGATAAAGAA
CTAGTAGAAGAGCACTACTCTGACCCTAAAGAAAGACAGCAGGTGTATTC
TCATATTGCTTCGGCAGCTGAGAGTGGATGGGATTTCTCTTCAAGGTATG
TGATCCTTTCTTGCTATAATAAAATAGATTTATATAATGTGTTCCTTTTC
TTCctatgataaaaaaattatatttttgtcaaaCGTTTTGAAAACGCTGC
CCCACCCCAACCTCCCAGGCTGTATAACATTAGCGAGtgtatgtatttgc
acttttgaggacggtaaagtgactgaagcggtttggaataacccgcagct
ctgacctgcaaaatcgaggacggtaatgATCCAACTGGTCCaacgtcgtc
ctcagtcagtcaggatgcagacaaattagaaccttaccgtcccCGTctct
gaaaaacacacatacataaactcggtattatctCAGATGATGTACAAAGC
AGGCTGATCctgacaaagcagaattgaCGAAATAATTTATCTTTATATTT
CAATactacagtggaacctctaatctGTGGATACCATCAGATTAGGGAAA
CAGAATAGTGTTTGCTGGGTAATTACTCTTACAGACTCGGAAGTCAGAGA
AAGGGCTTCTTTTGAAGAAAACTAATTTCAAATTATGAAGAACGGTGAAG
AAGATAGTGCTCAATAACAAGTAGAGCTAAATCATTTCATATATTTCTct
tcaaatattaaaaacaaacattacACTGTATTTCACGCACAAGGCGATCA
TCAGATGTggataaaaaaacacaaaaaaaaaaaaataatttttttttttt
tttttttttcccctttttattTTCCCCCTTGGGGGGAAAAcacgtggaaa
tttttttttttaatttttgaaaaaaaaatttcacctgATTTTCACCCACA
AAGTGTTCAAAAAatgtggaaaaaaaaaaaaaaaaaaaaaaaaactaatt
tcatTAATATTCATAGTCCCAGAAGAACTGTAACAAACTAGATAAATGTA
ATGATATAATCTGATTGAGGTTAACATGAGGACATACATATTTAGGCTTA
CAAACTTTCGAGATTCACCCTTTGTCTTTGGAAATTCTTgaaagggccat
tcgcgaaagtttatgcttttttaaaagattttttgttaaatttgtaAGTA
AATATAGTAAACTAATACTCTCTATTTTCTCTATATCTTCGATTCTTTAA
ATAGTAATGACAGACGAGTATCTGCTTTTTCAATCGCAATTAATATAACT
aaacatttcaatttaattttcattACAGGTGGTTTAATAATAGTATATCA
ATGTCAACCATCAGAACTGCTAATATCATACCAGTTGATTTGAACAGTAT
CTTATGTGCTGTAGAACTGGCGTTATCCTATCTCATCAAGGAAGTTGTAT
TGGATCCTCTTATGGCTCTTAGTTTACACAAAAATGCTATGAATCGATAT
ACTGCTATTAATGAGGTTCTATGGAATGAAGAAAAAGGGATATGGTCGGA
CTATTTTATCCaagagaaaaaattgaattcgCATTTCTACGCGTCTGATA
TTTTCCCATTATGGATTGAACATTTTGATTCTGAGCTACAGAAAAATAGT
CGGAGAGATGAAGTCCATACGGCTTTAGAAAGATTAAATGTAATGTCTTA
CAAAGGTGGTTTTCCAACATCTAAAATCAACTCTGGGCAACAGTGGGATT
TCCCAAATGGTTGGGCACCTTTACAGCATATTACTGTCCATTCCTTAGAC
AACAATGCTTCCAACTCTCAACTGAAAGAAAGTGGtagaaaaattgctca
aaattttcttgaaaactctTATTTAGCTTGGCAGATAACTGGACACATGT
TTGAAAAATACAATGTTGAAAGTAAAGGTAAGGCAGGACACGGTGGGGAA
TATGCTATTCAGACAGGNGAGAAAACTGGACACATGTTTGAAAAATACAA
TGTTGAAAGTAAAGGTAAGGCAGGACACGGTGGGGAATATGCTATTCAGA
CAGGTTTTGGTTGGACCAACGGTGTTATACTGGACTTTCTACATAAATAT
GGTGATGTTTTAGAGTCGCCAGAAAGCATTAGTAGTGATTCTTATACCAT
ATCTCCCATCTTAATTAAAGGTCCTCTTTCGGTGGGGAGATtgccttttg
ttttgtttggtgTCTCATATTTATTCATAGTATACTTTTTTGTTTGGCAA
TGACGACACGGTCTATCTTTAAAACgatgaaacttgaaattagtaCTGCT
TAGAGCTTGAGCTTTTGGAAAGCTTAAGATTTTAAATAAGAATTTCGATT
GAGGTGTCAAAATTATTGTTATGTCGAATTACACTTGAATGTGCTTACTC
TAACAAACATTACTGGTGTATTAGCTCTAAccttttttgattcaaatttt
gatgattttgaactGATCAGGTGATTTTTCTTCGATAATTcacaatttta
gttttaataATGTTTGTAGTTTAACTTTGATGATTCCATTTAATTTACTA
ACTCGTAAAGCTTTGTACTAAACTCGTTTCAACTAGAATGGCCAAGTTGG
ATCAGATCAGTTAACTATTTTGGTATGTAGCTAAAATTTGTCTAGCTTTT
TGGCTCACTGGTTTCATTGTCTTAAAGATAGAGTGTTTTCAgattatttt
attgattttattccagatcattttacagatttttattcattttagtACTT
TTACATACACTTCTTTTTATTAAGCTCAGGGTAAATTTTTTTAGACCCTC
AAAAAGCATTTTTCGAGCCTCGAATATGCTTATGATATGCCTTTGTAAAA
TTTATCTTGCATGTTATATATAtggttttttttgtaattataggagatta
aatgctttaaaatttCGTTAACTGAGACTGACGGccagccaggggggggg
gggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTGTACTAAACTCGTTTCAACTAGAATGGCC
AAGTTGGATCAGATCAGTTAACTATTTTGGTATGTAGCTAAAATTTGTCT
AGCTTTTTGGCTCACTGGTTTCATTGTCTTAAAGATAGAGTGTTTTCAga
ttattttattgattttatagatttttattcattttagtACTTTTACATAC
ACTTCTTTTTATTAAGCTCAGGGTAAATTTTCTTAGACCCTCAAAAACCA
TTTTTCGAGCCTTGAATATGCTTATGATATGCCTTTGTAAAATTTATCTT
GCATGTTATGTATatagttttttttgtaatttatagGAGATTAAATGCTT
TGAAATTTCGTTAACTGAGACTGAGGGCCAGCATATGCTCCCaaatgttt
aaaagttttacAAGAATTGAGCCTGGATATTATTATAAGTGTAATGCTTA
TATTATTATAAGTgtaatgcttataaataaaaaacgttttttgaaaTAGG
TTTATAGGGGATGTTTCACTGCAATGGAGTGTATTGATTATTAGTTCATT
GGTCGTATTAACCTAGTCGCTTGCCGATTTCTAAATAACCTTATTAATCA
AAAATCTGATAAAGAAGAGCTTGTGTGGTTGTTTTGCtgaatttatttat
tacacgttttttttacaagaacatccaaaatcgaaacttttggatgctct
taaccttttgagttttcagcctaaaaatgttcttaacatgttcttatttt
cccaatGTTGTggctattttcctaagaaatcggatgttttagagcctgca
aagccttaaaatgttcttaacttgttcttgacattttggccatcgaagc Coding sequence (CDS) from alignment at sc0000107:179306..184254+ >TCONS_00010512 ID=TCONS_00010512|Name=TCONS_00010512|organism=Clytia hemisphaerica|type=CDS|length=3840bp|location=Sequence derived from alignment at sc0000107:179306..184254+ (Clytia hemisphaerica)
GTGAATACAATAGAAATAAGAAATGATACTGAAGTAATGGCTCTTTATTA
TGTATTGTCATTGTTGGTTGTAGATTTTTCTCTCGTTCATGGTTTGGACT
TTGTACTCCCTTGTAAAGAAGATGGACCATTTTGTACTGGACctgttttg
gaaaaagttcAAATGAGTAGTATTTTTAATGATTCTAAACAGTTTGTGGA
TATGCCACTTAAACAGAATTGGACAAAATCTATAGAACAAGAAATTGTTA
ATGCGAAAAATGATGTTGAACTGAAACAAAAACTAGACCAATATTTTTAT
CCAGCTGGGACAAGAGAATGGCATAATGAAAATGTTACTTCAAAATATGA
CCTAAAGCTGATAGATCGAATCAAAGATAAACGCTATAAGAAATGGGCTA
AATTTCTTTGTCTTGAATGGAAGAAACTTGTACGCAAAATCAATCCAGAT
GTCAAAACAAATAGTCAGCGTTATTCAATGATTTATTTACGAGAGAAGCT
TGTCGTACCTGGGGGACGTTTCCGTGAAATGTATTACTGGGATACTTATT
GGTCTATTGAAGGCTTACTCCATTGTGAAATGTATGAAACGACTAAGAAT
ATTTTACAAGATTTATTACAAATGGTACAGCTTTATGGTTTTGTTCCAAA
CGGTGGCCGTAAATATTATGAGAATCGCAGTCAGCCACCGTTTCTGACAC
TTATGGTACTGAAATATTATGAAGCAACGAAAGACGCTAGTTTTGTTATA
AGGAATTACAAGACCTTGCTCAAAGAGCATGATTTTTGGATGCGAGAAAG
AGTTGTGAAAGTTACCAAAAATGGTACAATTTACACATTGAATCGATATT
TCAGTAAACTCGGATATCCAAGACCGGAATCTTTCAAGGAGGATAAAGAA
CTAGTAGAAGAGCACTACTCTGACCCTAAAGAAAGACAGCAGGTGTATTC
TCATATTGCTTCGGCAGCTGAGAGTGGATGGGATTTCTCTTCAAGGTGGT
TTAATAATAGTATATCAATGTCAACCATCAGAACTGCTAATATCATACCA
GTTGATTTGAACAGTATCTTATGTGCTGTAGAACTGGCGTTATCCTATCT
CATCAAGGAAGTTGTATTGGATCCTCTTATGGCTCTTAGTTTACACAAAA
ATGCTATGAATCGATATACTGCTATTAATGAGGTTCTATGGAATGAAGAA
AAAGGGATATGGTCGGACTATTTTATCCaagagaaaaaattgaattcgCA
TTTCTACGCGTCTGATATTTTCCCATTATGGATTGAACATTTTGATTCTG
AGCTACAGAAAAATAGTCGGAGAGATGAAGTCCATACGGCTTTAGAAAGA
TTAAATGTAATGTCTTACAAAGGTGGTTTTCCAACATCTAAAATCAACTC
TGGGCAACAGTGGGATTTCCCAAATGGTTGGGCACCTTTACAGCATATTA
CTGTCCATTCCTTAGACAACAATGCTTCCAACTCTCAACTGAAAGAAAGT
GGtagaaaaattgctcaaaattttcttgaaaactctTATTTAGCTTGGCA
GATAACTGGACACATGTTTGAAAAATACAATGTTGAAAGTAAAGGTAAGG
CAGGACACGGTGGGGAATATGCTATTCAGACAGGNGAGAAAACTGGACAC
ATGTTTGAAAAATACAATGTTGAAAGTAAAGGTAAGGCAGGACACGGTGG
GGAATATGCTATTCAGACAGGTTTTGGTTGGACCAACGGTGTTATACTGG
ACTTTCTACATAAATATGGTGATGTTTTAGAGTCGCCAGAAAGCATTAGT
AGTGATTCTTATACCATATCTCCCATCTTAATTAAAGGTCCTCTTTCGGT
GGGGAGATtgccttttgttttgtttggtgTCTCATATTTATTCATAGTAT
ACTTTTTTGTTTGGCAATGAGTGAATACAATAGAAATAAGAAATGATACT
GAAGTAATGGCTCTTTATTATGTATTGTCATTGTTGGTTGTAGATTTTTC
TCTCGTTCATGGTTTGGACTTTGTACTCCCTTGTAAAGAAGATGGACCAT
TTTGTACTGGACctgttttggaaaaagttcAAATGAGTAGTATTTTTAAT
GATTCTAAACAGTTTGTGGATATGCCACTTAAACAGAATTGGACAAAATC
TATAGAACAAGAAATTGTTAATGCGAAAAATGATGTTGAACTGAAACAAA
AACTAGACCAATATTTTTATCCAGCTGGGACAAGAGAATGGCATAATGAA
AATGTTACTTCAAAATATGACCTAAAGCTGATAGATCGAATCAAAGATAA
ACGCTATAAGAAATGGGCTAAATTTCTTTGTCTTGAATGGAAGAAACTTG
TACGCAAAATCAATCCAGATGTCAAAACAAATAGTCAGCGTTATTCAATG
ATTTATTTACGAGAGAAGCTTGTCGTACCTGGGGGACGTTTCCGTGAAAT
GTATTACTGGGATACTTATTGGTCTATTGAAGGCTTACTCCATTGTGAAA
TGTATGAAACGACTAAGAATATTTTACAAGATTTATTACAAATGGTACAG
CTTTATGGTTTTGTTCCAAACGGTGGCCGTAAATATTATGAGAATCGCAG
TCAGCCACCGTTTCTGACACTTATGGTACTGAAATATTATGAAGCAACGA
AAGACGCTAGTTTTGTTATAAGGAATTACAAGACCTTGCTCAAAGAGCAT
GATTTTTGGATGCGAGAAAGAGTTGTGAAAGTTACCAAAAATGGTACAAT
TTACACATTGAATCGATATTTCAGTAAACTCGGATATCCAAGACCGGAAT
CTTTCAAGGAGGATAAAGAACTAGTAGAAGAGCACTACTCTGACCCTAAA
GAAAGACAGCAGGTGTATTCTCATATTGCTTCGGCAGCTGAGAGTGGATG
GGATTTCTCTTCAAGGTGGTTTAATAATAGTATATCAATGTCAACCATCA
GAACTGCTAATATCATACCAGTTGATTTGAACAGTATCTTATGTGCTGTA
GAACTGGCGTTATCCTATCTCATCAAGGAAGTTGTATTGGATCCTCTTAT
GGCTCTTAGTTTACACAAAAATGCTATGAATCGATATACTGCTATTAATG
AGGTTCTATGGAATGAAGAAAAAGGGATATGGTCGGACTATTTTATCCaa
gagaaaaaattgaattcgCATTTCTACGCGTCTGATATTTTCCCATTATG
GATTGAACATTTTGATTCTGAGCTACAGAAAAATAGTCGGAGAGATGAAG
TCCATACGGCTTTAGAAAGATTAAATGTAATGTCTTACAAAGGTGGTTTT
CCAACATCTAAAATCAACTCTGGGCAACAGTGGGATTTCCCAAATGGTTG
GGCACCTTTACAGCATATTACTGTCCATTCCTTAGACAACAATGCTTCCA
ACTCTCAACTGAAAGAAAGTGGtagaaaaattgctcaaaattttcttgaa
aactctTATTTAGCTTGGCAGATAACTGGACACATGTTTGAAAAATACAA
TGTTGAAAGTAAAGGTAAGGCAGGACACGGTGGGGAATATGCTATTCAGA
CAGGNGAGAAAACTGGACACATGTTTGAAAAATACAATGTTGAAAGTAAA
GGTAAGGCAGGACACGGTGGGGAATATGCTATTCAGACAGGTTTTGGTTG
GACCAACGGTGTTATACTGGACTTTCTACATAAATATGGTGATGTTTTAG
AGTCGCCAGAAAGCATTAGTAGTGATTCTTATACCATATCTCCCATCTTA
ATTAAAGGTCCTCTTTCGGTGGGGAGATtgccttttgttttgtttggtgT
CTCATATTTATTCATAGTATACTTTTTTGTTTGGCAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010512-exon-sc0000107-1491911889:179306..180300 | TCONS_00010512-exon-sc0000107-1491911889:179306..180300 | Clytia hemisphaerica | exon |
| TCONS_00010512-exon-sc0000107-1510915933:179306..180300 | TCONS_00010512-exon-sc0000107-1510915933:179306..180300 | Clytia hemisphaerica | exon |
| TCONS_00010512-exon-sc0000107-1575043694:179306..180300 | TCONS_00010512-exon-sc0000107-1575043694:179306..180300 | Clytia hemisphaerica | exon |
| TCONS_00010512-exon-sc0000107-1491911889:181484..182909 | TCONS_00010512-exon-sc0000107-1491911889:181484..182909 | Clytia hemisphaerica | exon |
| TCONS_00010512-exon-sc0000107-1510915933:181484..182909 | TCONS_00010512-exon-sc0000107-1510915933:181484..182909 | Clytia hemisphaerica | exon |
| TCONS_00010512-exon-sc0000107-1575043694:181484..182909 | TCONS_00010512-exon-sc0000107-1575043694:181484..182909 | Clytia hemisphaerica | exon |
| TCONS_00010512-exon-sc0000107-1491911889:183606..184254 | TCONS_00010512-exon-sc0000107-1491911889:183606..184254 | Clytia hemisphaerica | exon |
| TCONS_00010512-exon-sc0000107-1510915933:183606..184254 | TCONS_00010512-exon-sc0000107-1510915933:183606..184254 | Clytia hemisphaerica | exon |
| TCONS_00010512-exon-sc0000107-1575043694:183606..184254 | TCONS_00010512-exon-sc0000107-1575043694:183606..184254 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107 | supercontig | sc0000107:179306..184254 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0003824 | catalytic activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005991 | trehalose metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0005991 |
trehalose metabolic process |
| molecular_function |
GO:0004555 |
alpha,alpha-trehalase activity |
| molecular_function |
GO:0003824 |
catalytic activity |
Blast
BLAST of TCONS_00010512 vs. Swiss-Prot (Human)
Match: TREA (Trehalase OS=Homo sapiens GN=TREH PE=1 SV=2) HSP 1 Score: 377.481 bits (968), Expect = 8.815e-118 Identity = 226/577 (39.17%), Postives = 318/577 (55.11%), Query Frame = 1
Query: 109 PCKEDGPFCTGPVLEKVQMSSIFNDSKQFVDMPLK-------QNWTK-------SIEQEIVNAKNDVELKQKLDQYFYPAGTREWHNENVTSKYDLKLIDRIKDKRYKKWAKFLCLEWKKLVRKINPDVKTNSQRYSMIYLREKLVVPGGRFREMYYWDTYWSIEGLLHCEMYETTKNILQDLLQMVQLYGFVPNGGRKYYENRSQPPFLTLMVLKYYEATKDASFVIRNYKTLLKEHDFWMRERVVKVTKNGTIYTLNRYFSKLGYPRPESFKEDKELVEEHYSDPK-ERQQVYSHIASAAESGWDFSSRWF---NNSISMSTIRTANIIPVDLNSILCAVELALSYLIKEVVLDPLMALSLHKNAMNRYTAINEVLWNEEKGIWSDYFIQEKKLNSHFYASDIFPLWIEHFDSELQKNSRRDEVHTALERLNVMSYKGGFPTSKINSGQQWDFPNGWAPLQHITVHSLDNNASNSQLKESGRKIAQNFLENSYLAWQITGHMFEKYNVESKGKAGHGGEYAIQTGEKTGHMFEKYNVESKGKAGHGGEYAIQTGFGWTNGVILDFLHKYGDVLES 1785
PC E +C G +L +VQM+ ++ D KQFVDMPL Q +T+ SI +E + A + K Q P +W + + + +I D + + WA L WKKL +K+ P+V ++ +R+S+IY +VPGGRF E YYWD+YW +EGLL EM ET K +LQ+ L +V+ YG VPNGGR YY RSQPP LTLM+ Y T D +F+ N +TL E DFW + R V V+ G Y LNRY+ G PRPES+ +D EL + + P+ +R+ +++ + + AESGWDFSSRW N S+S IRT+ ++PVDLN+ LC E +S + D A R A+N VLW+E+ G W DY +++KK N FY S++ PLW F D+ LE +++Y+ G PTS +GQQWDFPN WAPLQ + + L A + +E ++AQN++ + F+ Y+ +S M+EKY+V + G+ G GGEY +Q GFGWTNGV+L L +YGD L S
Sbjct: 27 PC-ESEIYCHGELLNQVQMAKLYQDDKQFVDMPLSIAPEQVLQTFTELSRDHNHSIPREQLQAFVHEHFQAK-GQELQPWTPADWKDSP-------QFLQKISDAKLRAWAGQLHQLWKKLGKKMKPEVLSHPERFSLIYSEHPFIVPGGRFVEFYYWDSYWVMEGLLLSEMAETVKGMLQNFLDLVKTYGHVPNGGRVYYLQRSQPPLLTLMMDCYLTHTNDTAFLQENIETLALELDFWTKNRTVSVSLEGKNYLLNRYYVPYGGPRPESYSKDVELAD---TLPEGDREALWAELKAGAESGWDFSSRWLIGGPNPNSLSGIRTSKLVPVDLNAFLCQAEELMSNFYSRLGNDS-QATKYRILRSQRLAALNTVLWDEQTGAWFDYDLEKKKKNREFYPSNLTPLWAGCFSDP----GVADKALKYLEDNRILTYQYGIPTSLQKTGQQWDFPNAWAPLQDLVIRGL-AKAPLRRAQEVAFQLAQNWIRTN----------FDVYSQKSA-------------------MYEKYDVSNGGQPGGGGEYEVQEGFGWTNGVVLMLLDRYGDRLTS 556
The following BLAST results are available for this feature:
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