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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010499 ID=TCONS_00010499|Name=TCONS_00010499|organism=Clytia hemisphaerica|type=transcript|length=873bp
TGGAGATTTGAATCGGGAGCTTCTGGTTTGAGGCGGTAACGCTATCGAGT
ATTTGGATATCACTTCTCAAAGCATGAGGAACGCCAGTACGGTAGGACTG
AAACTCCTCCCAAGAGGAGGCCACCTAATAACGAAGAACGACACTTTCTC
AGGGCATCTGGATACCGTCTTTTCCCTACAAAATGCTGTACTGATTTTAA
TACTCCTCTTTTCGGTCACCGGCAATTCATACATCATCACCATGACGACC
TGGTCGCGATGGAAAAACAAACGTAAGGATCGGAAATCAATTGACTATTT
AACGACACATCTTGCTGTAATGGATCTTTTACTGGTAATTACATCTGTAC
CAGAGATGTTGAGCCATAACATTTACTCCACTTTCATGTTTGGTCCCATT
GGTTGTAAAATCATTTATCCTTTATCCACTCACGCCGTCATTGCGTCCGT
GCTAACGCTTCTTATCATCGCGTATGAACGTTATCAAGCGTCAAAAACAC
AGACCATCATAATGCGTAGTAAACATACAACAATCATTTTATCAGCTATC
AGTTTTGTTAGTATCGTACTTGTCTGTCCTTACTCTTGGGTCCTTACTTA
TGAGTCTAAATCTACGGTAGACGAAGCATTGTGTTTCGAAAGATGGGGAG
TGTTGTATCGAAGGATGTACACGTTGGTATTATTTATTGTGCAGTACTCA
TGCCCAGTTCTGCTTATGAGTTATTATTACTACCACACGTGGAAGAATAT
AAAGACTTCTACAAATAATTTGATATTACGGATGAGTGTTGATCCCACGC
CCTTACTAAAGGGTGGAACGCCCTCGGAGTTGGTGACAACTCTTTCGACT
GGAGCAAATATTTCGGactttac Run BLAST on NCBI protein sequence of TCONS_00010499-protein >TCONS_00010499-protein ID=TCONS_00010499-protein|Name=TCONS_00010499-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
MRNASTVGLKLLPRGGHLITKNDTFSGHLDTVFSLQNAVLILILLFSVTG
NSYIITMTTWSRWKNKRKDRKSIDYLTTHLAVMDLLLVITSVPEMLSHNI
YSTFMFGPIGCKIIYPLSTHAVIASVLTLLIIAYERYQASKTQTIIMRSK
HTTIILSAISFVSIVLVCPYSWVLTYESKSTVDEALCFERWGVLYRRMYT
LVLFIVQYSCPVLLMSYYYYHTWKNIKTSTNNLILRMSVDPTPLLKGGTP
SELVTTLSTGANISDF Run BLAST on NCBI transcript from alignment at sc0000106:394575..395447 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010499 ID=TCONS_00010499|Name=TCONS_00010499|organism=Clytia hemisphaerica|type=transcript|length=873bp|location=Sequence derived from alignment at sc0000106:394575..395447 (Clytia hemisphaerica)
gtaaagtCCGAAATATTTGCTCCAGTCGAAAGAGTTGTCACCAACTCCGA
GGGCGTTCCACCCTTTAGTAAGGGCGTGGGATCAACACTCATCCGTAATA
TCAAATTATTTGTAGAAGTCTTTATATTCTTCCACGTGTGGTAGTAATAA
TAACTCATAAGCAGAACTGGGCATGAGTACTGCACAATAAATAATACCAA
CGTGTACATCCTTCGATACAACACTCCCCATCTTTCGAAACACAATGCTT
CGTCTACCGTAGATTTAGACTCATAAGTAAGGACCCAAGAGTAAGGACAG
ACAAGTACGATACTAACAAAACTGATAGCTGATAAAATGATTGTTGTATG
TTTACTACGCATTATGATGGTCTGTGTTTTTGACGCTTGATAACGTTCAT
ACGCGATGATAAGAAGCGTTAGCACGGACGCAATGACGGCGTGAGTGGAT
AAAGGATAAATGATTTTACAACCAATGGGACCAAACATGAAAGTGGAGTA
AATGTTATGGCTCAACATCTCTGGTACAGATGTAATTACCAGTAAAAGAT
CCATTACAGCAAGATGTGTCGTTAAATAGTCAATTGATTTCCGATCCTTA
CGTTTGTTTTTCCATCGCGACCAGGTCGTCATGGTGATGATGTATGAATT
GCCGGTGACCGAAAAGAGGAGTATTAAAATCAGTACAGCATTTTGTAGGG
AAAAGACGGTATCCAGATGCCCTGAGAAAGTGTCGTTCTTCGTTATTAGG
TGGCCTCCTCTTGGGAGGAGTTTCAGTCCTACCGTACTGGCGTTCCTCAT
GCTTTGAGAAGTGATATCCAAATACTCGATAGCGTTACCGCCTCAAACCA
GAAGCTCCCGATTCAAATCTCCA Coding sequence (CDS) from alignment at sc0000106:394575..395447 >TCONS_00010499 ID=TCONS_00010499|Name=TCONS_00010499|organism=Clytia hemisphaerica|type=CDS|length=798bp|location=Sequence derived from alignment at sc0000106:394575..395447 (Clytia hemisphaerica)
aaagtCCGAAATATTTGCTCCAGTCGAAAGAGTTGTCACCAACTCCGAGG
GCGTTCCACCCTTTAGTAAGGGCGTGGGATCAACACTCATCCGTAATATC
AAATTATTTGTAGAAGTCTTTATATTCTTCCACGTGTGGTAGTAATAATA
ACTCATAAGCAGAACTGGGCATGAGTACTGCACAATAAATAATACCAACG
TGTACATCCTTCGATACAACACTCCCCATCTTTCGAAACACAATGCTTCG
TCTACCGTAGATTTAGACTCATAAGTAAGGACCCAAGAGTAAGGACAGAC
AAGTACGATACTAACAAAACTGATAGCTGATAAAATGATTGTTGTATGTT
TACTACGCATTATGATGGTCTGTGTTTTTGACGCTTGATAACGTTCATAC
GCGATGATAAGAAGCGTTAGCACGGACGCAATGACGGCGTGAGTGGATAA
AGGATAAATGATTTTACAACCAATGGGACCAAACATGAAAGTGGAGTAAA
TGTTATGGCTCAACATCTCTGGTACAGATGTAATTACCAGTAAAAGATCC
ATTACAGCAAGATGTGTCGTTAAATAGTCAATTGATTTCCGATCCTTACG
TTTGTTTTTCCATCGCGACCAGGTCGTCATGGTGATGATGTATGAATTGC
CGGTGACCGAAAAGAGGAGTATTAAAATCAGTACAGCATTTTGTAGGGAA
AAGACGGTATCCAGATGCCCTGAGAAAGTGTCGTTCTTCGTTATTAGGTG
GCCTCCTCTTGGGAGGAGTTTCAGTCCTACCGTACTGGCGTTCCTCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010499-exon-sc0000106-1491911889:394575..395447 | TCONS_00010499-exon-sc0000106-1491911889:394575..395447 | Clytia hemisphaerica | exon |
| TCONS_00010499-exon-sc0000106-1510915933:394575..395447 | TCONS_00010499-exon-sc0000106-1510915933:394575..395447 | Clytia hemisphaerica | exon |
| TCONS_00010499-exon-sc0000106-1575043694:394575..395447 | TCONS_00010499-exon-sc0000106-1575043694:394575..395447 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000106 | supercontig | sc0000106:394575..395447 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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