TCONS_00010307 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010307
Unique NameTCONS_00010307
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010307 ID=TCONS_00010307|Name=TCONS_00010307|organism=Clytia hemisphaerica|type=transcript|length=3156bp
GCTTTATGTTACACTCCGAAAGTTTTCTTTTCATCAGTTTTTACAAGAGA
TGTCGGTGCATATGGTTGCACCTTATGTTTTGGATTTGATGTTGGTCAAT
TTGGTTTTGTCTTGATACCGATGTCGGTACTAATTAATAATTAGCTCTCT
AATTTGTTCTCCAGCGTAGCGTCTCAACTCATTAGTGTTTCGCGTAGTCC
CTTGAGACTTTTGATACTGTTTTTCTATTGTAGAATTTATTCTAGCCTTT
TATATTATAATTAGGCAATTATGACGTAGCATTTTGAAGGCGTTTGACAG
TGTTGCCTTTCGTGTCTTTTTTGTGTTCAAACTCTCGTACTGTAGAGAGA
GGAGAGAAGAGAATTTTGACGTATTCTAAGAAGACATTTTCGTGCTCGAA
ACTAAAAGCAATTTCTTGTTTGGAAAGAATTTTGTTACATTGAGGTGAAG
TTTTTACCACTGTCACGCCAAAGTGTTNCATTTTCGTGCTCGAAACTAAA
AGCAATTTCTTGTTTGGAAAGAATTTTGTTACATTGAGGTGAAGTTTTTA
CCACTGTCACGCGTGTTTTTACCTGCATATCGAATGAATATATGCTGAGT
CAAAACTTCAAACGTGAATCGTTTACAAGAGAGAATGATTGATATATTTT
GTCTATTTGTTATGTCActatgttatttttttgtttcaaatttttattgg
ttGTATATAGGTTGGatatgaaaatcttattttatgGCACTATGATATTT
CTTTTAAGAGACAAAAAATGGCTACTTTAAAGGGATattcagatggtttg
agatatttcgATTACAGAAACCTTCTGTGGTCCATAGTAAAACTTCAAAA
GTATTCTTGTGTaacaattttctaaaatcgagatatcaaaatttgaaatt
tttgaaaatgggctCTTAAATATCCCGAATTTGTAAAAtagttaggcaaa
aatattttgaggttttgctcaggactatagaaggatcccacatgccaaat
attacaaaccatctgattattccTTTAAGGACACCAAAAGTTTGAAGAAT
ATTTATTAGAGTCAATctgatttcttttattttctaatATCCTTATGTTC
GcttttgaaatttccaaggtCCTTGAAGAACTAGATTAGATTACGTTATC
AAATTGACAATGGTTTATTTTAGAAAAGAACTTTTAACTTATGTCCCAAT
GTGTTAAGATTTGAACCGCGGTCGAATTTGAAATCTTTGTATATTAAAAT
CCGTCAAAAGTGGCGTGAGCCTTTATGAAGTACTGCGAAGAATGCTTTGA
ATTTGAGAGGTAGGGTTAGCAGCTTGACAAGGGCGATTACGGTCTACGTT
aaagcgaccgtagtacagtggtagagcatccagctacggtgcgcaaggtt
gtgggttcaacccccagccgggtcataccataagattcccaaaatggtaa
ttgatgcttctctgcttgatgttcggcaactaaagagacggatcaagggt
aagtggagaaattcagggaaaggagtggcgccctcccctaccttcgggta
gacagctatacgaaaagggagccttcgggtcgccctcgactgcggttgaa
aacttacttacttacggTCTAGCTGTGTAGTAAACATATTATTGCGTTGA
CGAATTTTTTAGAATAGCATAATGAAAAAACAAAGTAAGTCTTTCATCCT
CCTGATCTGCACCTTCATCGAATTGACCAATGCTGGTAATTTTCTGATCT
TGGGAGACTGGGGAGGAATCCCAATTCGGCCATACACAACAGATATCGAG
GAATCAACAGCCAATCAGATGTCAGTAACTGCAACTCAAAAGAATTCTAA
ATTTGTTATCGCTTTAGGtgataatttttatttcacGGGTGTGAAGAACG
AATATGACCATCGCTTCAATGAAACGTATAACGATGTATTCAACCAACCT
TCTCTTCAAGTTCCATGGTACGTGGTTGCTGGCAACCATGATCACTACGG
TAATATTACTGGACAACTGGAGTacacaaaacattcaaacatttGGACAT
TCCCAAGTTTATGGTATTCAAAAACATTCCAATTTTCAGACACCAGCCGC
ACAATGAAGCTGATAATGATTGATACAGTGGTGTTATGTGGGAACACTGA
TTCTGACTTTGATGCTATGCCACCCAACGGGTCCAGAGGGCTGGGTACTA
GCCGAAGAACAATGGGCGTGGTTGGAGACTGAACTTAAAGCATCTTCTGA
CTTCGATTACCTGCTTGTTGGTGGTCATTTTCCTGTCTGGTCGATCGCTG
AGCACGGTCCAACATCACAATTGGTTGAACGGTTGAAACCCTTATTAGAG
AAATATGCTGTGTCAGCATATATTAATGGACATGACCACAACTTGCAgCA
TATTAAAGAAGACTCATCAGATGTCCATTATTTTACCATCGGATGCGCCA
ACTTCATTGAAGATTCCAAAAAACATAAGGATTCCATTCCCAAAGGTTCA
CTTCAATTTTACTGGGCAGAATCGAGTCGAAAAGGTGGATTTGCATTTGT
TGATGTGACCGATACTGAGATGTCACTGACCATGATTGATTCCATGGGCG
CACCTATTCATCAACAAAGTATCAAACCAAGAAATCATAgtttaaaacca
atttttccttgatttttaCTATAAGATTTTTTGTGATAACGGTTTTATTT
TTAACATGCTTTTctcagaattttgaaataaattttcgtTTGTGATCCGT
TTTTTTCTCCCTTAGAGTACTTTATGATGTGAATATAAAACAGCCTTATC
TAAATAATCTTATGGTTTCTCCTCAGTCTTTGATGAGTTTGTATATGCTC
ggcaatctcgtacccagagacACCTGtacaacttttttttactttactgA
TGTGATACAATCGTGTGTGCTATCAGAATAATCAAAATAGGATGCGAATT
TAAGTGCTCGGGCATTCGCTTTTGAGTAGTAAATACATGACAAGAACCAT
CGAAATTTGACCCTTTATCACAAAGAAGCTGGTGAACAAGTAGAATTTTT
ATCGATAGTTTTatgtaaatttgaattatttcagCCCAAATTTTTAACGa
cgttttaaacatttttttcacaaaatacaattttgcaTAAGTTTATAGCC
TTTGGT
Run BLAST on NCBI

transcript from alignment at sc0000104:223702..230547-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010307 ID=TCONS_00010307|Name=TCONS_00010307|organism=Clytia hemisphaerica|type=transcript|length=6846bp|location=Sequence derived from alignment at sc0000104:223702..230547- (Clytia hemisphaerica)
GCTTTATGTTACACTCCGAAAGTTTTCTTTTCATCAGTTTTTACAAGAGA
TGTCGGTGCATATGGTTGCACCTTATGTTTTGGATTTGATGTTGGTCAAT
TTGGTTTTGTCTTGATACCGATGTCGGTACTAATTAATAATTAGCTCTCT
AATTTGTTCTCCAGCGTAGCGTCTCAACTCATTAGTGTTTCGCGTAGTCC
CTTGAGACTTTTGATACTGTTTTTCTATTGTAGAATTTATTCTAGCCTTT
TATATTATAATTAGGCAATTATGACGTAGCATTTTGAAGGCGTTTGACAG
TGTTGCCTTTCGTGTCTTTTTTGTGTTCAAACTCTCGTACTGTAGAGAGA
GGAGAGAAGAGAATTTTGACGTATTCTAAGAAGACATTTTCGTGCTCGAA
ACTAAAAGCAATTTCTTGTTTGGAAAGAATTTTGTTACATTGAGGTGAAG
TTTTTACCACTGTCACGCCAAAGTGTTNCATTTTCGTGCTCGAAACTAAA
AGCAATTTCTTGTTTGGAAAGAATTTTGTTACATTGAGGTGAAGTTTTTA
CCACTGTCACGCGTGTTTTTAGTAAGTATATTTTTTCACCTAGACTTAGC
TTTGTTATTGGACTTTAGCCTAGATTTCTTGATGTCTTGTAAGCAAATTT
TTAGGCCTTGTCAAACATTTTTCTAAGCAAAACTTTTGTACTTATTTTTT
AGCCTGCATATCGAATGAATATATGCTGAGTCAAAACTTCAAACGTGAAT
CGTTTACAAGAGAGAATGATTGATATATTTTGTCTATTTGTTATGTCACT
ATGTTATTTTTTTGTTTCAAATTTTTATTGGTTGTATATAGGTTGGATAT
GAAAATCTTATTTTATGGCACTATGATATTTCTTTTAAGAGACAAAAAAT
GGCTACTTTAAAGGGATATTCAGATGGTTTGAGATATTTCGATTACAGAA
ACCTTCTGTGGTCCATAGTAAAACTTCAAAAGTATTCTTGTGTAACAATT
TTCTAAAATCGAGATATCAAAATTTGAAATTTTTGAAAATGGGCTCTTAA
ATATCCCGAATTTGTAAAATAGTTAGGCAAAAATATTTTGAGGTTTTGCT
CAGGACTATAGAAGGATCCCACATGCCAAATATTACAAACCATCTGATTA
TTCCTTTAAGGACACCAAAAGTTTGAAGAATATTTATTAGAGTCAATCTG
ATTTCTTTTATTTTCTAATATCCTTATGTTCGCTTTTGAAATTTCCAAGG
TCCTTGAAGAACTAGATTAGATTACGTTATCAAATTGACAATGGTTTATT
TTAGAAAAGAACTTTTAACTTATGTCCCAATGTGTTAAGATTTGAACCGC
GGTCGAATTTGAAATCTTTGTATATTAAAATCCGTCAAAAGTGGCGTGAG
CCTTTATGAAGTACTGCGAAGAATGCTTTGAATTTGAGAGGTAGGGTTAG
CAGCTTGACAAGGGCGATTACGGTCTACGTTAAAGCGACCGTAGTACAGT
GGTAGAGCATCCAGCTACGGTGCGCAAGGTTGTGGGTTCAACCCCCAGCC
GGGTCATACCATAAGATTCCCAAAATGGTAATTGATGCTTCTCTGCTTGA
TGTTCGGCAACTAAAGAGACGGATCAAGGGTAAGTGGAGAAATTCAGGGA
AAGGAGTGGCGCCCTCCCCTACCTTCGGGTAGACAGCTATACGAAAAGGG
AGCCTTCGGGTCGCCCTCGACTGCGGTTGAAAACTTACTTACTTACGGTC
TAGCTGTGTAGTAAACATATTATTGCGTTGACGAATTTTTTAGAATAGCA
TAATGAAAAAACAAAGTAAGTCTTTCATCCTCCTGATCTGCACCTTCATC
GAATTGACCAATGCTGGTAATTTTCTGATCTTGGGAGACTGGGGAGGAAT
CCCAATTCGGCCATACACAACAGATATCGAGGAATCAACAGCCAATCAGA
TGTCAGTAACTGCAACTCAAAAGAATTCTAAATTTGTTATCGCTTTAGGT
ACGTTGTTTTTTGTGTACACGCTTTTTTTATAAGAATGTAGACTAGCAAG
CGTCTGTCTTTCCTTGGACACAGGAACGCAGGAATAGTGCTTATAATAAA
GAGTTCTTATAAAAAATAGAAATTGCCGCGGGAGAGTGGGTTGGAAAGAC
AGACGCATGTATTCAGTGAACATATAAAAAAAAATAGATCCCATTGAAAG
TTTAATCTGCAGCGAAATACAACGACGTGGTTTACTAGTCTAATAAGAAT
GATGTTTTTTCATTTCATCATGGATATTCTTTTTGGGAAAAATCATCCGA
AAATATTCTTACTGTATTCTTAGGTTAGGATCGAAATTCAAACTTAGTTT
AACAAGAAATACCTATCTGAAGCATAAAATGACTTTTTGTGAAGGTATTT
AAACCTGACTTTGGGATAATTGGTAATTTATAGTTAAAAATTTTTTCTTT
AAATACCATTCTTAGGGTTTGTTGCCAAACTCCATGATGATGATATTCTT
AGCATATTCTTAATTATTCGGAAATTTTCATCATGAACATTCTTATAAAG
TATATTCTTATAAAAAAAGCGCGTAATTTTCTTTTTCAACTCTCGTGTTA
GATTTTTGAATGTTGTAACTTTCTGAGGTTATATGAATGCTTCTTTAATT
TTTCTTATCCTTATTCTGGGTACCTAAAATCCGTATTGTTTTCTACATTT
TGGAGTCTAGAAGTTTTTCCTACCTGAAACTCAAGAGGGGTTCGTTATTT
TTCTACTTCCAGGTGATAATTTTTATTTCACGGGTGTGAAGAACGAATAT
GACCATCGCTTCAATGAAACGTATAACGATGTATTCAACCAACCTTCTCT
TCAAGTTCCATGGTATGTAAAGAAATTTGTTAACTACACTCATTTTGTTT
TATAAGCATACGGTAAATTTCGGCTGAAGCTCACTATGCTTAAGTAAAGC
TCAATTTTGAGCCTCGACTATGCTTAACCCTATGCTTGGTAAAAAAATTA
TGAAGGGGGGGGGGTAAGTTTTTCGCGCATTTTCCCCTCTCTTTAATTTT
GAGAGAAATTAAGACATTCTATTGTTTTCGAATGTTTACCATATTATATA
TGATATATGACTCTTTCTTCTGTTATTTTCTGAAGTTTTGGAAATTATGA
TTCTAAAAGTTTCTTTGGCTGAGCCTCAAGGTATGCTTAGCATATGCTTA
ATTTTTCTGGAAATTTGAGCTTCAGTATGCTTATAAAGAACCAAACCCCC
TTTCATTTTGCTTAGAGTTGTGTCTACAATCAGTACTGTAATATTTTGGC
AGTAAGCCTCAAAAACAACCCCTAAGCTACGTTTTTTAGTTCTCTAAGCC
CCTTTCCCCCCAACTTCAATAATTGATAAGCACCAGAGAGCCCAATCCAA
CCATTGAAGTTGGGGGGAGGGGTTTGACTTTAAAAAACATGAAAATCACT
ATTCACTGCCATGTCAAATATTACGGGACTAATTGTAGATAGCCTTATAT
TTTTTAATTAGCTATAGATTCAATCCCCGATCGCTGTTATAAAAGTTAAC
GAGAAGCTTGGTAAACTAATCAAATCAAAAACTACACCCGGTAAAATTTT
TTCATCCAAAGGGAGTGAAAATAACGAACTGAAACTCGATGAGGATTGAT
AATCTGATATTTTTTATGGCTGCGGGGATTAAAATTCCATTGTTTTCAAG
TCAGAAAATACAGTAGGGATGCGAAAAATAACACAATATAGATTGGTATT
ATTTATTATTTTCAGTGGGATAAAAATTGGAGTATAATTTTCCACTGAGG
ACGATATATCGGCCAAATTTTTCCACTGGGAAGCGGTCCCAGTGGGTCTT
TGTCACCTTAAAGAGCAGAAAGTGGCAATGAACCCTCCAGCATTTGACCT
TCATGACTTGTGCAAATAGTACATAAGATTGGATCCCTCGCTTCCGGCTC
TACACTGGACAGATCACTGCAATTAACGGTCGAATATATGGCGAAAAAGA
AATTTTCCTCCAAATTTCGAAAACCGAAAGTAGTTTTCAAGTGCCTTAAA
TTTAGAATTAGAAAATATAATTTTAATTCTGAGCTTTAACATAAGACTTA
ACACTTGGGATCTGATGATACAAAAGCTTAGAAATGGTCCCACTAGGCTA
ACAATATTTAGTCAAATTGCATCTGGCATAGATTTGAGAAAATGTTGTTA
TTATTGATCTAGCCAGGGTTGTATGAAATGAACCCTCTCGGTACCATTCT
CTTTAGAAATAGGTTTCAAATACCAATTTAACAATCTTTTGCAGGTACGT
GGTTGCTGGCAACCATGATCACTACGGTAATATTACTGGACAACTGGAGT
ACACAAAACATTCAAACATTTGGACATTCCCAAGTTTATGGTATTCAAAA
ACATTCCAATTTTCAGGTATATCATTTTTCAATTCAAGACCAGGATGTGT
ACTGGATGAGGCAGCATTTGAAAACACTTTCAAAATATAGAATTCTAAAC
TTTACCTAGACTAAATTAGGCAAATCACTATCTAAGAAATAAGCCAAAAG
CCGAAGAAAATTTGCAAACGGGTTTTTTTCCGAAAAGAGTTTACAGTCGG
TAGAGTTAGTCAGTCTCTCTTCAAAAGTCTCCCGCCGATTTTTTTATACC
GCCATATTTTGCCGCCTTTACTATCACCGTAACGGACGATAACATCGTCT
AAACTTTACAGTAAAATGAATTCTCAAGAACTTGAAATTTATGACTAGTC
ACCGCGTTCCAGTTTCTAAGGAACCTCCAAAAATTAAAGGTTGAATCTTT
TAAAACTCGACTTGGCCCTATATGGTAGTGTCATTACTCCCTCGTGTTGG
CTACTCCAAACCTTAGTATTCTACTTTATCTTTTTAGACACCAGCCGCAC
AATGAAGCTGATAATGATTGATACAGTGGTGTTATGTGGGAACACTGATT
CTGACTTTGATGCTATGCCACCCAACGGTAGACAATTGGTTTCTTTTATT
TCATTTTGATAAAGTTTCTTAAATAAGAAACGATTTCGTGTTCATTGTAA
CAAACTTGCCTCTTTGAAGAGATCTACAAACAAAATGACGATTACCGAAA
GAAGAGATCATTTTTAGAAGGTAGGAAGATTTGCAAAATAAAGCATCAAA
AGATTTGACTTCAAAATAAAATTTCCCGTATGTTTTTCTTCCAAAACAGG
TCCAGAGGGCTGGGTACTAGCCGAAGAACAATGGGCGTGGTTGGAGACTG
AACTTAAAGCATCTTCTGACTTCGATTACCTGCTTGTTGGTGGTCATTTT
CCTGTCTGGTCGATCGCTGAGCACGGTCCAACATCACAATTGGTTGAACG
GTTGAAACCCTTATTAGAGAAATATGCTGTGTCAGCATATATTAATGGAC
ATGACCACAACTTGCAGGTTAGTTTTTTTATAAGCAATTCTAATTTTGAG
GATGCTAAGGTATAAATAAGGGATTTAGAGTATGCTATTTTGCCTGCTAA
ATTGAAATCGGGTATAGAAGCTCCTCTAAAATGACTTTTGATGCCGAAGA
TGTCAATAGTAGTTAATTGGTTGCTTTCCTGTATAGAGATCAAGAGTTGC
TAAGCCAAATTAACTAAGTTATTTAATTTTTAGGGTCATAATGAGATCTG
AGCCTTTAGCAACCAGCTTACTTAAAAAATGTCCAATACTAGCTTACATA
TTGTTTCAACTTTCATTTACAATCAAAGTCGCTATAACATTTGATTAAAA
GGGGATTTTAGATTTAAATAATTAAGAAAAATCTTTTATAAGTGTTCCAA
TTTACTTCAGGAATGTAGAGTTTAACTCTAAGTTTTAGTATTAGATTTAA
AACTTAGGAAGACCTAAGGATCTCGTGATCCAAAAGCTCAAACGTGTTCT
AATAAGGCTTGGAAGCTACAAAACCCTTCAAGACCTTCAATGAAATAAAG
TAGGACAAGCACTTGAACTGCAATTCTCACCCAAATACCCAAAATATATT
CAATATATTTTGAACAAATTCTTCGGATTCTACTTCAATTGCAGTGGAAG
TAAGAGTTTGTTTTACATGTCATTTTATTTCCTCATAGCATATTAAAGAA
GACTCATCAGATGTCCATTATTTTACCATCGGATGCGCCAACTTCATTGA
AGATTCCAAAAAACATAAGGATTCCATTCCCAAAGGTTCACTTCAATTTT
ACTGGGCAGAATCGAGTCGAAAAGGTGGATTTGCATTTGTTGATGTGACC
GATACTGAGATGTCACTGACCATGATTGATTCCATGGGCGCACCTATTCA
TCAACAAAGTATCAAACCAAGAAATCATAGTTTAAAACCAATTTTTCCTT
GATTTTTACTATAAGATTTTTTGTGATAACGGTTTTATTTTTAACATGCT
TTTCTCAGAATTTTGAAATAAATTTTCGTTTGTGATCCGTTTTTTTCTCC
CTTAGAGTACTTTATGATGTGAATATAAAACAGCCTTATCTAAATAATCT
TATGGTTTCTCCTCAGTCTTTGATGAGTTTGTATATGCTCGGCAATCTCG
TACCCAGAGACACCTGTACAACTTTTTTTTACTTTACTGATGTGATACAA
TCGTGTGTGCTATCAGAATAATCAAAATAGGATGCGAATTTAAGTGCTCG
GGCATTCGCTTTTGAGTAGTAAATACATGACAAGAACCATCGAAATTTGA
CCCTTTATCACAAAGAAGCTGGTGAACAAGTAGAATTTTTATCGATAGTT
TTATGTAAATTTGAATTATTTCAGCCCAAATTTTTAACGACGTTTTAAAC
ATTTTTTTCACAAAATACAATTTTGCATAAGTTTATAGCCTTTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005787XLOC_005787Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010307-exon-sc0000104-1575043694:229977..230547TCONS_00010307-exon-sc0000104-1575043694:229977..230547Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1575043694:228550..229845TCONS_00010307-exon-sc0000104-1575043694:228550..229845Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1575043694:227686..227785TCONS_00010307-exon-sc0000104-1575043694:227686..227785Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1575043694:226132..226253TCONS_00010307-exon-sc0000104-1575043694:226132..226253Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1575043694:225570..225660TCONS_00010307-exon-sc0000104-1575043694:225570..225660Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1575043694:225131..225348TCONS_00010307-exon-sc0000104-1575043694:225131..225348Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1575043694:223702..224459TCONS_00010307-exon-sc0000104-1575043694:223702..224459Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1510915933:229977..230547TCONS_00010307-exon-sc0000104-1510915933:229977..230547Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1510915933:228550..229845TCONS_00010307-exon-sc0000104-1510915933:228550..229845Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1510915933:227686..227785TCONS_00010307-exon-sc0000104-1510915933:227686..227785Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1510915933:226132..226253TCONS_00010307-exon-sc0000104-1510915933:226132..226253Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1510915933:225570..225660TCONS_00010307-exon-sc0000104-1510915933:225570..225660Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1510915933:225131..225348TCONS_00010307-exon-sc0000104-1510915933:225131..225348Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1510915933:223702..224459TCONS_00010307-exon-sc0000104-1510915933:223702..224459Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1491911889:229977..230547TCONS_00010307-exon-sc0000104-1491911889:229977..230547Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1491911889:228550..229845TCONS_00010307-exon-sc0000104-1491911889:228550..229845Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1491911889:227686..227785TCONS_00010307-exon-sc0000104-1491911889:227686..227785Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1491911889:226132..226253TCONS_00010307-exon-sc0000104-1491911889:226132..226253Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1491911889:225570..225660TCONS_00010307-exon-sc0000104-1491911889:225570..225660Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1491911889:225131..225348TCONS_00010307-exon-sc0000104-1491911889:225131..225348Clytia hemisphaericaexon
TCONS_00010307-exon-sc0000104-1491911889:223702..224459TCONS_00010307-exon-sc0000104-1491911889:223702..224459Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000104supercontigsc0000104:223702..230547 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
63.5272	60.5258	48.0955	42.2049	15.483	2.44654	16.3573	14.5294	14.6016	12.4828	12.2473	10.1472	1.39635e-08	1.12367	16.427	14.1356	16.6348	15.0516	8.52554	8.54516	0.0265579	0.0149336	55.8565	48.3303	0.000207143	0	3.1032	5.18376	35.0949	43.3938
Blast
[Close]
BLAST of TCONS_00010307 vs. Swiss-Prot (Human)
Match: PPA5 (Tartrate-resistant acid phosphatase type 5 OS=Homo sapiens GN=ACP5 PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 7.488e-40
Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 1 
Query: 1726 TNAGNFLILGDWGGIPIRPYTTDIEESTANQMSVTATQKNSKFVIALGDNFYFTGVKNEYDHRFNETYNDVFNQPSL-QVPWYVVAGNHDHYGNITGQLEYTKHSNIWTFPSLWYSKTFQFSDTSRTMKLIMIDTVVLCGNTDSDFDAMPPNGSRGLGTSR 2205
            T A  F+ +GDWGG+P  P+ T  E + A +++ T     + F+++LGDNFYFTGV++  D RF ET+ DVF+  SL +VPWYV+AGNHDH GN++ Q+ Y+K S  W FPS +Y   F+   T+ ++ + M+DTV LCGN+D DF +  P   R +  +R
Sbjct:   23 TPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQILGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSD-DFLSQQPERPRDVKLAR 182

HSP 2 Score: 145.206 bits (365), Expect = 2.758e-37
Identity = 70/171 (40.94%), Postives = 108/171 (63.16%), Query Frame = 2 
Query: 2147 LILTLMLC---------HPTGPEGWVLAEEQWAWLETELKASSDFDYLLVGGHFPVWSIAEHGPTSQLVERLKPLLEKYAVSAYINGHDHNLQHIKEDSSDVHYFTIGCANFIEDSKKHKDSIPKGSLQFYWAESSRKGGFAFVDVTDTEMSLTMIDSMGAPIHQQSIKPR 2632
            ++ T+ LC          P  P    LA  Q +WL+ +L A+ + DY+LV GH+PVWSIAEHGPT  LV++L+PLL  Y V+AY+ GHDHNLQ++ +D + V Y   G  NF++ SK+H+  +P G L+F++      GGFA+V+++  EM++T I++ G  + +  +  R
Sbjct:  154 MLDTVTLCGNSDDFLSQQPERPRDVKLARTQLSWLKKQLAAARE-DYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGHDHNLQYL-QDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPRR 322
The following BLAST results are available for this feature:
BLAST of TCONS_00010307 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPA57.488e-4045.34Tartrate-resistant acid phosphatase type 5 OS=Homo... [more]
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