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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00010207 ID=TCONS_00010207|Name=TCONS_00010207|organism=Clytia hemisphaerica|type=transcript|length=2000bp
ATTGCGAAAAAGAACGTAAATAAGAGCTTATCGCATCATTTTATCGTCTA
ACGGATGTGCGATAGATATATATTTTATGCAGTGAATGCTGTGTCAAGGA
AAGTTATTTCATGCGCTCTGGCTGTTGAAGTTAACGAAAGGAGCATTGTT
AATTTGAAGGTTAATAATTTGTCACTGGCTGTTTTTGAATCAATAGAGGT
TAAATATCTAACTACTACATCTACATCCCaaataaaattgtatttcgGTT
GAGGAAACCTTTCATTATGAACACCCTTTAGAAGAGAAGAAACCAAGGGA
TGTTTTCCAATTGGTAAACCATCAATATGTTGATGGTAAGCAGATATTGC
GGACCTGTAACCAGCAATTGTACTATGTTCAAGGTCTCTCTGAAAATAAT
CAGTTAAGAACTCTATGATGAAATTTAGAGGGCATCGAAAGGGATCAACT
TGTTTTGTACCACACCAGCTATCCCACATACCCCAGGCCGATTTGTAATG
AGATCGTGTCCCTGGTCTTCTTGAGGCAGTGATGAGCTCTGCAGCTTTCT
CCGATGATCCCTTTGCTTCGATTCTCTCCCTGAAACTGTCCAAGCCACCA
GTTGGAGGCTTTGATTCTGTATTAAAGGGTGTATTATGTTTTGAGGGTTC
ATCAAAAGGTCCCATTGGTTTGGGATAAGAATAGGGTTTTGAATGGACAA
TTGAAGACGTTGTGGATACCAGCTTTGAGTCTGCCAGGCTGGTGTTATTA
ACAAGATTGTTGCCTTTTCGGCTGATACCTTCCAAAGAACTTTCCCTATT
AGACAAAATGGTGGGAACGCATACCCCCTTATGTGAGTCCACTGAGTCTG
AAATGCATCCTGTCCCCTGCTGTAGGGATCTATTTTCCAAGAATAATAAA
GAGGTACTTGGTGGGTTAGTCTTGAGGCAAAAAGGTCTGTACACGGTGTC
CCCCTTGCTTTGCAAAGTTCTCGAAATATCTGAGTTTTTAGTTTCCATTC
GCTGGAGTCTTTCACTGATCGTGATTGGCGGTCTGCTTCTACATTCAGGC
GCCCTGGAAGATACTCTACAGTAATCGTGATCTGATGCTCTAAAAGGTAT
TTCCAGATCTCCTTGCTTAGGTCTGTTAACAGTTTGCTGTGGGTTCCTCC
CATTTTCTTCAAATATGTAAGGGCTGCTATATTGTCCATCTGAATGTGAA
TGGACAATGTTTGTGGAAAAAGCCTGTGGAATGCTAGTATTGCTAGTTTT
GCAGCTTTCAACTCTAGTACATTGATATGAAGATCCTGTTCTGGTGCTGA
CCATTGACCCCCTGTTTCCTTCCCCTTGCAGTATGCACCCCATCCTTCCT
TGGATGCATCTGAAGATATCAAAAGTTGAGTAGGAGGTAAAACTAGAGAA
CGTCCGTTTGTCAATTGAAGGTTTTGACACCACCAGTTCAGTTCTTCCTT
CACCTCTTCTGACAAGGAAATCATTGAGTCGAAATTTTTGTGTCTCGACA
GCTCTTTTATCTGTTGGCTTTGTATAGCTCTGTACTGAAGAGGTGCAGGG
AGAACTGCTACTGCTGCTGAGGACAAGAGGCCAAGAAGTTTTGTGAGATC
CCTTATCGATACCTGAGAAGATTCCAGCATATTCTGACACTGGGAAATTA
TCTTTTCCATTTTCTCTGGTGGCAGGCTCAATTTTAAATTCAACGAGTCC
ACTTCCACCCCCAAATAGTAGGAGATACGTTAAATGTTGTCTTTCTCAAG
CCAAGTCTCCTTACATTTTGAAATCCTCTATACAAATTTAAGCGTTGGCT
CATTCATTCTCTTTACTGCTGATAGGTTGATCAACATTTTATGTTATTGT
TTGGGCTCGTTGAGAAGAATCACACCAAGTGTCGTAGAAGCCATTCTTGA
TGAGGTAAAAAGTTTTTCCCGTCGAATGttagtagtaagtaagtctacGA
CCGCAGTCAGAGGctacccgaaggctcctctttcgatagctatctacNCG Run BLAST on NCBI transcript from alignment at sc0000103:333847..335846- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00010207 ID=TCONS_00010207|Name=TCONS_00010207|organism=Clytia hemisphaerica|type=transcript|length=2000bp|location=Sequence derived from alignment at sc0000103:333847..335846- (Clytia hemisphaerica)
ATTGCGAAAAAGAACGTAAATAAGAGCTTATCGCATCATTTTATCGTCTA
ACGGATGTGCGATAGATATATATTTTATGCAGTGAATGCTGTGTCAAGGA
AAGTTATTTCATGCGCTCTGGCTGTTGAAGTTAACGAAAGGAGCATTGTT
AATTTGAAGGTTAATAATTTGTCACTGGCTGTTTTTGAATCAATAGAGGT
TAAATATCTAACTACTACATCTACATCCCAAATAAAATTGTATTTCGGTT
GAGGAAACCTTTCATTATGAACACCCTTTAGAAGAGAAGAAACCAAGGGA
TGTTTTCCAATTGGTAAACCATCAATATGTTGATGGTAAGCAGATATTGC
GGACCTGTAACCAGCAATTGTACTATGTTCAAGGTCTCTCTGAAAATAAT
CAGTTAAGAACTCTATGATGAAATTTAGAGGGCATCGAAAGGGATCAACT
TGTTTTGTACCACACCAGCTATCCCACATACCCCAGGCCGATTTGTAATG
AGATCGTGTCCCTGGTCTTCTTGAGGCAGTGATGAGCTCTGCAGCTTTCT
CCGATGATCCCTTTGCTTCGATTCTCTCCCTGAAACTGTCCAAGCCACCA
GTTGGAGGCTTTGATTCTGTATTAAAGGGTGTATTATGTTTTGAGGGTTC
ATCAAAAGGTCCCATTGGTTTGGGATAAGAATAGGGTTTTGAATGGACAA
TTGAAGACGTTGTGGATACCAGCTTTGAGTCTGCCAGGCTGGTGTTATTA
ACAAGATTGTTGCCTTTTCGGCTGATACCTTCCAAAGAACTTTCCCTATT
AGACAAAATGGTGGGAACGCATACCCCCTTATGTGAGTCCACTGAGTCTG
AAATGCATCCTGTCCCCTGCTGTAGGGATCTATTTTCCAAGAATAATAAA
GAGGTACTTGGTGGGTTAGTCTTGAGGCAAAAAGGTCTGTACACGGTGTC
CCCCTTGCTTTGCAAAGTTCTCGAAATATCTGAGTTTTTAGTTTCCATTC
GCTGGAGTCTTTCACTGATCGTGATTGGCGGTCTGCTTCTACATTCAGGC
GCCCTGGAAGATACTCTACAGTAATCGTGATCTGATGCTCTAAAAGGTAT
TTCCAGATCTCCTTGCTTAGGTCTGTTAACAGTTTGCTGTGGGTTCCTCC
CATTTTCTTCAAATATGTAAGGGCTGCTATATTGTCCATCTGAATGTGAA
TGGACAATGTTTGTGGAAAAAGCCTGTGGAATGCTAGTATTGCTAGTTTT
GCAGCTTTCAACTCTAGTACATTGATATGAAGATCCTGTTCTGGTGCTGA
CCATTGACCCCCTGTTTCCTTCCCCTTGCAGTATGCACCCCATCCTTCCT
TGGATGCATCTGAAGATATCAAAAGTTGAGTAGGAGGTAAAACTAGAGAA
CGTCCGTTTGTCAATTGAAGGTTTTGACACCACCAGTTCAGTTCTTCCTT
CACCTCTTCTGACAAGGAAATCATTGAGTCGAAATTTTTGTGTCTCGACA
GCTCTTTTATCTGTTGGCTTTGTATAGCTCTGTACTGAAGAGGTGCAGGG
AGAACTGCTACTGCTGCTGAGGACAAGAGGCCAAGAAGTTTTGTGAGATC
CCTTATCGATACCTGAGAAGATTCCAGCATATTCTGACACTGGGAAATTA
TCTTTTCCATTTTCTCTGGTGGCAGGCTCAATTTTAAATTCAACGAGTCC
ACTTCCACCCCCAAATAGTAGGAGATACGTTAAATGTTGTCTTTCTCAAG
CCAAGTCTCCTTACATTTTGAAATCCTCTATACAAATTTAAGCGTTGGCT
CATTCATTCTCTTTACTGCTGATAGGTTGATCAACATTTTATGTTATTGT
TTGGGCTCGTTGAGAAGAATCACACCAAGTGTCGTAGAAGCCATTCTTGA
TGAGGTAAAAAGTTTTTCCCGTCGAATGTTAGTAGTAAGTAAGTCTACGA
CCGCAGTCAGAGGCTACCCGAAGGCTCCTCTTTCGATAGCTATCTACNCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00010207-exon-sc0000103-1575043694:333847..335846 | TCONS_00010207-exon-sc0000103-1575043694:333847..335846 | Clytia hemisphaerica | exon |
| TCONS_00010207-exon-sc0000103-1510915933:333847..335846 | TCONS_00010207-exon-sc0000103-1510915933:333847..335846 | Clytia hemisphaerica | exon |
| TCONS_00010207-exon-sc0000103-1491911889:333847..335846 | TCONS_00010207-exon-sc0000103-1491911889:333847..335846 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103 | supercontig | sc0000103:333847..335846 - |
Blast
The following BLAST results are available for this feature:
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