TCONS_00010148 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010148
Unique NameTCONS_00010148
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010148 ID=TCONS_00010148|Name=TCONS_00010148|organism=Clytia hemisphaerica|type=transcript|length=298bp
ATCCTGCTAAAATCTTACGAACTATCACTGGACTGATCAAAGTACTGAGA
GACTTAATTTCTCTTGCTGAAcaacataaaattgaaaatcaacttTACTA
CGGCGATTGTTTGGATCAAGTGTACCAACTCTTGGACGACACCAGATTGG
ACAAATGGCTATCAACAATCTGTGAAGAAGAGATCACTGAGAAACAATGG
TCAAATCTCATCATCTTCCTGGAGAAGGACGTCAAACTTCTCCAGCAAAA
GCAACTCATCAAACTCCCAACCAACAAAGACGATAAAGATGGCAAGTC
Run BLAST on NCBI

transcript from alignment at sc0000102:587786..588083

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010148 ID=TCONS_00010148|Name=TCONS_00010148|organism=Clytia hemisphaerica|type=transcript|length=298bp|location=Sequence derived from alignment at sc0000102:587786..588083 (Clytia hemisphaerica)
GACTTGCCATCTTTATCGTCTTTGTTGGTTGGGAGTTTGATGAGTTGCTT
TTGCTGGAGAAGTTTGACGTCCTTCTCCAGGAAGATGATGAGATTTGACC
ATTGTTTCTCAGTGATCTCTTCTTCACAGATTGTTGATAGCCATTTGTCC
AATCTGGTGTCGTCCAAGAGTTGGTACACTTGATCCAAACAATCGCCGTA
GTAaagttgattttcaattttatgttgTTCAGCAAGAGAAATTAAGTCTC
TCAGTACTTTGATCAGTCCAGTGATAGTTCGTAAGATTTTAGCAGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005702XLOC_005702Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010148-exon-sc0000102-1491911889:587786..588083TCONS_00010148-exon-sc0000102-1491911889:587786..588083Clytia hemisphaericaexon
TCONS_00010148-exon-sc0000102-1510915933:587786..588083TCONS_00010148-exon-sc0000102-1510915933:587786..588083Clytia hemisphaericaexon
TCONS_00010148-exon-sc0000102-1575043694:587786..588083TCONS_00010148-exon-sc0000102-1575043694:587786..588083Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000102supercontigsc0000102:587786..588083 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.31578	4.85894	3.61628	0.525629	5.36638	3.39247	3.06965	4.78962	4.02399	0.830727	1.38732	2.3073	2.45638	1.37423	1.35965	0.484982	1.48551	0.918562	0.846029	3.15513	0	0	1.51904	2.22949	7.26318	7.06154	0.545649	1.74699	1.56907	0.884082
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010148 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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