TCONS_00010083 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010083
Unique NameTCONS_00010083
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length121

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010083 ID=TCONS_00010083|Name=TCONS_00010083|organism=Clytia hemisphaerica|type=transcript|length=121bp
AATCCCTTGACACCCTTACTCAAATTATCTTCACACGATCGTAAACGTCA
TGCTGAAGATGCTCAATCTAGTGTAATCAACACACCAAAGATTCTGAAAC
TGGAGGCAGTACCTGCAACGG
Run BLAST on NCBI

transcript from alignment at sc0000102:407530..407812+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010083 ID=TCONS_00010083|Name=TCONS_00010083|organism=Clytia hemisphaerica|type=transcript|length=283bp|location=Sequence derived from alignment at sc0000102:407530..407812+ (Clytia hemisphaerica)
AATCCCTTGACACCCTTACTCAAATTATCTTCACACGGTAAGATTGCATT
TGTTCAAGCAGCTATCTCCAGTTCAGATTTTTAAAGTAAATCTATTTTAC
GTTGAATTGTATTTCTCCTGGCATTGGCAACGGCAAGACTTTCATATTAT
AATAGAATTGATTCTAATTCGTTTGATTCTCTATCTTTTACTCATTCAGA
TCGTAAACGTCATGCTGAAGATGCTCAATCTAGTGTAATCAACACACCAA
AGATTCTGAAACTGGAGGCAGTACCTGCAACGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005653XLOC_005653Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010083-exon-sc0000102-1491911889:407530..407566TCONS_00010083-exon-sc0000102-1491911889:407530..407566Clytia hemisphaericaexon
TCONS_00010083-exon-sc0000102-1510915933:407530..407566TCONS_00010083-exon-sc0000102-1510915933:407530..407566Clytia hemisphaericaexon
TCONS_00010083-exon-sc0000102-1575043694:407530..407566TCONS_00010083-exon-sc0000102-1575043694:407530..407566Clytia hemisphaericaexon
TCONS_00010083-exon-sc0000102-1491911889:407729..407812TCONS_00010083-exon-sc0000102-1491911889:407729..407812Clytia hemisphaericaexon
TCONS_00010083-exon-sc0000102-1510915933:407729..407812TCONS_00010083-exon-sc0000102-1510915933:407729..407812Clytia hemisphaericaexon
TCONS_00010083-exon-sc0000102-1575043694:407729..407812TCONS_00010083-exon-sc0000102-1575043694:407729..407812Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000102supercontigsc0000102:407530..407812 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00010083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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